pam/Makefile at main · biotoolbox/pam · GitHub

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.PHONY: test

install:
	Rscript -e 'packages <- readLines("packages.txt"); install.packages(packages)'

test:
	rm -rf src/tests/testthat/results
	Rscript -e "setwd('src/'); library(devtools); test()"

test-%:
	rm -rf src/tests/testthat/results
	@echo "running test file: test-$*"
	$(eval ARGS := $(if $(suffix $(*)),$(*),$(*).R))
	$(eval path := tests/testthat/test-$(ARGS))
	Rscript -e "setwd('src/'); library(devtools); devtools::load_all(); library(testthat); test_file('$(path)')"

build:
	Rscript -e "setwd('src/'); library(devtools); devtools::load_all(); devtools::document(); devtools::build()"

buildtest:
	rm -rf src/tests/testthat/results
	make build
	R CMD check pam_2.2.0.tar.gz

buildtestcran:
	rm -rf src/tests/testthat/results
	make build
	R CMD check --as-cran pam_2.2.0.tar.gz