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add CCDS mapping and annotation #122

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newgene opened this issue Dec 6, 2021 · 0 comments
Open

add CCDS mapping and annotation #122

newgene opened this issue Dec 6, 2021 · 0 comments
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newgene commented Dec 6, 2021

The Consensus CDS (CCDS) project is a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The long term goal is to support convergence towards a standard set of gene annotations.

https://www.ncbi.nlm.nih.gov/projects/CCDS/CcdsBrowse.cgi

The mapping from CCDS ids to gene ids can be found from:

or from

Since we might have already parsed RefSeq files, the RefSeq option might be a bit more efficient to get the data into MyGene.info

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