{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":304656428,"defaultBranch":"dev","name":"Biosimulators","ownerLogin":"biosimulators","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2020-10-16T14:48:48.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/70395832?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1717507891.0","currentOid":""},"activityList":{"items":[{"before":"0a31476e4e97d4ecc1f8411b19c30564a4601396","after":"c8fda7544e47d1c6e3f89ebb15c8323ad5b5055e","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-07-14T11:30:41.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"96c4cbeea0857dcafc19e93c0dc643c19beca56b","after":"0a31476e4e97d4ecc1f8411b19c30564a4601396","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-07-14T07:50:12.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}},{"before":"18fe9a8bbd93e7f6d48eb4d480420566c2e2c543","after":"96c4cbeea0857dcafc19e93c0dc643c19beca56b","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-07-02T15:32:46.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"324fdef55a7de90cbeea6108951683f8e1832227","after":"18fe9a8bbd93e7f6d48eb4d480420566c2e2c543","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-07-02T13:17:21.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}},{"before":"11b2bb692a975bc8d7ebdff07ea8faa04049638e","after":"324fdef55a7de90cbeea6108951683f8e1832227","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-06-27T10:01:43.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"d8cf5e8dfcc52811ecb279c3a38af4e22fa60a0f","after":"11b2bb692a975bc8d7ebdff07ea8faa04049638e","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-06-27T08:35:30.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}},{"before":"7102f9c4a402602c1dddfb71628db573e551c269","after":"d8cf5e8dfcc52811ecb279c3a38af4e22fa60a0f","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-06-04T13:31:16.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"e4b40ada043a5875a735decd8a0352f887d88208","after":"7102f9c4a402602c1dddfb71628db573e551c269","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-06-04T11:13:40.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}},{"before":null,"after":"64c9b51bd759e535820a96300efe5e10cf94de18","ref":"refs/heads/dependabot/pip/Dockerfile-assets/requests-2.32.0","pushedAt":"2024-05-21T01:50:44.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"},"commit":{"message":"---\nupdated-dependencies:\n- dependency-name: requests\n dependency-type: direct:development\n...\n\nSigned-off-by: dependabot[bot] ","shortMessageHtmlLink":"---"}},{"before":"cb4feaa3bb95e80a1fe18e57eae6515765d854a6","after":"e4b40ada043a5875a735decd8a0352f887d88208","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-15T22:50:57.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"1329dd7de5af7be4e253e984af39480cef422af6","after":"cb4feaa3bb95e80a1fe18e57eae6515765d854a6","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-15T12:38:25.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}},{"before":"374111b6424e267b323633e1434f3c5c7e4b3d1d","after":"1329dd7de5af7be4e253e984af39480cef422af6","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-09T09:10:53.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"39addd63efc6243dbd37c3b7fa2ef22b24409089","after":"374111b6424e267b323633e1434f3c5c7e4b3d1d","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-09T08:41:35.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}},{"before":"85dab0fc7371e3e192ec7b98990212bb28e46f37","after":"39addd63efc6243dbd37c3b7fa2ef22b24409089","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-03T10:58:12.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"b8785544c71bf5635ee3248f44854b10246eb81d","after":"85dab0fc7371e3e192ec7b98990212bb28e46f37","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-03T07:11:35.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}},{"before":"f4520aa317bb2cebf96f0cdf421046ebd85cef78","after":"ed0a5485d5db0f5100ae944324e8513711d51ebd","ref":"refs/heads/dev","pushedAt":"2024-05-03T07:09:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Need quotes.","shortMessageHtmlLink":"Need quotes."}},{"before":"074af43ac20d6d32825b8fa5c4916ff2eb4cf55c","after":"b8785544c71bf5635ee3248f44854b10246eb81d","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-03T04:40:57.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to v1 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to v1 [SECURITY]"}},{"before":"22caddab6732a1f3bf8df069e68d3c7e50715159","after":"f4520aa317bb2cebf96f0cdf421046ebd85cef78","ref":"refs/heads/dev","pushedAt":"2024-05-03T01:12:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Manually pin urllib3 to <2.0\n\nThis would have been fixed by a more recent pip, but oldPip doesn't know about the mistake.","shortMessageHtmlLink":"Manually pin urllib3 to <2.0"}},{"before":"bc18aeb2dbec62cef0de829a352b6a7abbc59392","after":"22caddab6732a1f3bf8df069e68d3c7e50715159","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:59:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Setup.py part of test suite; whoops.","shortMessageHtmlLink":"Setup.py part of test suite; whoops."}},{"before":"eb981e96adcd1960449486ef9267d537ad8f10ed","after":"bc18aeb2dbec62cef0de829a352b6a7abbc59392","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:52:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"3.11 seems to work; simplify and remove cache purge.\n\nWe're freshly installing everything; there's nothing to purge.","shortMessageHtmlLink":"3.11 seems to work; simplify and remove cache purge."}},{"before":"f5510d1634e9fe8391773bfdf6887ce1a76795d5","after":"eb981e96adcd1960449486ef9267d537ad8f10ed","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:46:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Remove tmate.\n\nIt does not seem to actually be helpful very often, and messes up telling us that things failed. If needed, we can comment it back in for debugging sessions.","shortMessageHtmlLink":"Remove tmate."}},{"before":"f8338ec971026f1701b0d43ab9fb4e4541b14cba","after":"f5510d1634e9fe8391773bfdf6887ce1a76795d5","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:45:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Nothing works! Try python 3.11\n\nIssue may be old version of pip in combination with python 3.12. Will need to update ALL OF OUR SETUP.PY FILES as the standard thing we do literally everywhere is illegal in pip for the last year+.","shortMessageHtmlLink":"Nothing works! Try python 3.11"}},{"before":"2591b25a979101e99ef5f7e37a8897645464ff1e","after":"f8338ec971026f1701b0d43ab9fb4e4541b14cba","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:38:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Try get-pip twice instead?","shortMessageHtmlLink":"Try get-pip twice instead?"}},{"before":"d31b124195fc3b20864b3122c29a9ebee58e9308","after":"2591b25a979101e99ef5f7e37a8897645464ff1e","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:32:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Try the double-install-pip trick.\n\nSometimes there are multiple installations of pip, and you need to replace all of them.\nAlso move 'Install simulator validation utilities' up to fail faster.","shortMessageHtmlLink":"Try the double-install-pip trick."}},{"before":"dcc423090905da2ca8e0eda0d266d659f33b7f90","after":"d31b124195fc3b20864b3122c29a9ebee58e9308","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:22:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Go back to installing different pip with get-pip.","shortMessageHtmlLink":"Go back to installing different pip with get-pip."}},{"before":"6c8ac6caa2407e74edaaff3dcc3efe23b7c603f4","after":"dcc423090905da2ca8e0eda0d266d659f33b7f90","ref":"refs/heads/dev","pushedAt":"2024-05-03T00:13:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"pipenv seems to fix the error I'm seeing, sometimes.","shortMessageHtmlLink":"pipenv seems to fix the error I'm seeing, sometimes."}},{"before":"8e0b52f415889442757dc5bcceeff77538576e88","after":"6c8ac6caa2407e74edaaff3dcc3efe23b7c603f4","ref":"refs/heads/dev","pushedAt":"2024-05-02T23:55:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Install distutils (in setuptools) first.","shortMessageHtmlLink":"Install distutils (in setuptools) first."}},{"before":"6e15b77375b580ff31e6615dc902d4d43d322349","after":"8e0b52f415889442757dc5bcceeff77538576e88","ref":"refs/heads/dev","pushedAt":"2024-05-02T23:39:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Revert pip; install docker and libsbml directly.","shortMessageHtmlLink":"Revert pip; install docker and libsbml directly."}},{"before":"4502752c966eb69b57eec47c994df0445772f47c","after":"6e15b77375b580ff31e6615dc902d4d43d322349","ref":"refs/heads/dev","pushedAt":"2024-05-02T23:26:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"luciansmith","name":"Lucian Smith","path":"/luciansmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1736150?s=80&v=4"},"commit":{"message":"Assume pip is already installed.","shortMessageHtmlLink":"Assume pip is already installed."}},{"before":"365a2f8bd4c3c592ab674e3007819b3cb320cf8e","after":"074af43ac20d6d32825b8fa5c4916ff2eb4cf55c","ref":"refs/heads/renovate/pypi-numpy-vulnerability","pushedAt":"2024-05-02T22:59:59.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"renovate[bot]","name":null,"path":"/apps/renovate","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/2740?s=80&v=4"},"commit":{"message":"Update dependency numpy to <1.26.5 [SECURITY]","shortMessageHtmlLink":"Update dependency numpy to <1.26.5 [SECURITY]"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEfvP5hAA","startCursor":null,"endCursor":null}},"title":"Activity ยท biosimulators/Biosimulators"}