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Kaibu online runner errors #10

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esgomezm opened this issue Apr 21, 2023 · 1 comment
Open

Kaibu online runner errors #10

esgomezm opened this issue Apr 21, 2023 · 1 comment

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@esgomezm
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Hi there @oeway @FynnBe and @constantinpape

Some of the models do not run in the Kaibu application for running the model in the browser.
I found out that

  • TensorFlow models do not work (for example placid-llama).
  • Pytorch models which don't have a Torchscript model, don't run either (for example 2D UNet Arabidopsis Apical Stem Cells). See the error here:

Screenshot 2023-04-21 at 15 42 08

Screenshot 2023-04-21 at 15 42 01

- Other models in PyTorch such as hiding-blowfish. - When running the inference in 3D samples, the viewer doesn't synchronise the input image with the output.

I'm not sure which of the errors come from the model specification or from the bioengine

@oeway
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oeway commented Apr 21, 2023

I think it's coming from the bioengine, we didn't sync the new models properly to the server. I will look into that.

For the views for 3D, there is no easy fix for synchronizing 3D at the moment.

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