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I have been struggling with my submission for a while, and I think I finally pinpointed the issue, for which I might need some recommendation.
This is my PR for the genome-uploader, a python-based resource to upload genomes to ENA and create all necessary documents required for the submission. I have been trying to build the conda environment based on the meta.yml in the genome-uploader folder, and it fails because of package dependencies and incompatibilities. I also decided to submit the new attempt to this PR so that you could see it.
I am quite confused, as these requirements have always worked in plenty of local and cluster installations. It is even the recommendation I am providing in the original github repo, and what has been used for the pypi package, which also works. I generated this meta.yml with greyskull, using the pypi package as a reference.
Could you please help me understand what is the matter with my configuration? I am not able to discern why it generally works, but not for this submission.
Thank you very much!!
Germana Baldi
Bioinformatician at MGnify
The text was updated successfully, but these errors were encountered:
Hello,
I have been struggling with my submission for a while, and I think I finally pinpointed the issue, for which I might need some recommendation.
This is my PR for the genome-uploader, a python-based resource to upload genomes to ENA and create all necessary documents required for the submission. I have been trying to build the conda environment based on the meta.yml in the
genome-uploader
folder, and it fails because of package dependencies and incompatibilities. I also decided to submit the new attempt to this PR so that you could see it.I am quite confused, as these requirements have always worked in plenty of local and cluster installations. It is even the recommendation I am providing in the original github repo, and what has been used for the pypi package, which also works. I generated this meta.yml with greyskull, using the pypi package as a reference.
Could you please help me understand what is the matter with my configuration? I am not able to discern why it generally works, but not for this submission.
Thank you very much!!
Germana Baldi
Bioinformatician at MGnify
The text was updated successfully, but these errors were encountered: