From a523f3dbcf079a8c1605080bffc6b173c7006506 Mon Sep 17 00:00:00 2001 From: Ophelia Yang <86372475+oyangz@users.noreply.github.com> Date: Wed, 7 Feb 2024 08:57:21 -0800 Subject: [PATCH] fix: load detoxify model from state dict and upgrade transformers version (#180) * fix: load detoxify model from state dict and upgrade transformers version * update bertscore values for integ tests --- poetry.lock | 461 +++++++++++------- pyproject.toml | 3 +- .../helper_models/helper_model.py | 38 +- .../test_summarization_accuracy.py | 2 +- ...marization_accuracy_semantic_robustness.py | 24 +- 5 files changed, 344 insertions(+), 184 deletions(-) diff --git a/poetry.lock b/poetry.lock index ffdcddc3..85dd8e44 100644 --- a/poetry.lock +++ b/poetry.lock @@ -376,7 +376,7 @@ metrics-tests = ["Werkzeug (>=1.0.1)", "accelerate", "bert-score (>=0.3.6)", "ji quality = ["black (>=23.1,<24.0)", "pyyaml (>=5.3.1)", "ruff (>=0.0.241)"] s3 = ["s3fs"] tensorflow = ["tensorflow (>=2.2.0,!=2.6.0,!=2.6.1)", "tensorflow-macos"] -tensorflow_gpu = ["tensorflow-gpu (>=2.2.0,!=2.6.0,!=2.6.1)"] +tensorflow-gpu = ["tensorflow-gpu (>=2.2.0,!=2.6.0,!=2.6.1)"] tests = ["Pillow (>=6.2.1)", "absl-py", "apache-beam (>=2.26.0,<2.44.0)", "elasticsearch (<8.0.0)", "faiss-cpu (>=1.6.4)", "joblib (<1.3.0)", "joblibspark", "librosa", "lz4", "py7zr", "pyspark (>=3.4)", "pytest", "pytest-datadir", "pytest-xdist", "rarfile (>=4.0)", "s3fs (>=2021.11.1)", "soundfile (>=0.12.1)", "sqlalchemy (<2.0.0)", "tensorflow (>=2.3,!=2.6.0,!=2.6.1)", "tensorflow-macos", "tiktoken", "torch", "transformers", "zstandard"] torch = ["torch"] vision = ["Pillow (>=6.2.1)"] @@ -405,19 +405,6 @@ category = "main" optional = false python-versions = ">=3.5" -[[package]] -name = "detoxify" -version = "0.5.1" -description = "A python library for detecting toxic comments" -category = "main" -optional = false -python-versions = ">=3.6" - -[package.dependencies] -sentencepiece = ">=0.1.94" -torch = ">=1.7.0" -transformers = "4.22.1" - [[package]] name = "dill" version = "0.3.7" @@ -484,7 +471,7 @@ evaluator = ["scipy (>=1.7.1)", "transformers"] quality = ["black (>=22.0,<23.0)", "flake8 (>=3.8.3)", "isort (>=5.0.0)", "pyyaml (>=5.3.1)"] template = ["cookiecutter", "gradio (>=3.0.0)"] tensorflow = ["tensorflow (>=2.2.0,!=2.6.0,!=2.6.1)"] -tensorflow_gpu = ["tensorflow-gpu (>=2.2.0,!=2.6.0,!=2.6.1)"] +tensorflow-gpu = ["tensorflow-gpu (>=2.2.0,!=2.6.0,!=2.6.1)"] tests = ["Werkzeug (>=1.0.1)", "absl-py", "accelerate", "bert-score (>=0.3.6)", "cer (>=1.2.0)", "charcut (>=1.1.1)", "jiwer", "mauve-text", "nltk", "pytest", "pytest-datadir", "pytest-xdist", "requests-file (>=1.5.1)", "rouge-score (>=0.1.2)", "sacrebleu", "sacremoses", "scikit-learn", "scipy", "sentencepiece", "seqeval", "six (>=1.15.0,<1.16.0)", "tensorflow (>=2.3,!=2.6.0,!=2.6.1,<=2.10)", "texttable (>=1.6.3)", "tldextract (>=3.1.0)", "toml (>=0.10.1)", "torch", "transformers", "trectools", "unidecode (>=1.3.4)"] torch = ["torch"] @@ -806,7 +793,7 @@ notebook = ["ipywidgets", "notebook"] parallel = ["ipyparallel"] qtconsole = ["qtconsole"] test = ["pickleshare", "pytest (<7.1)", "pytest-asyncio (<0.22)", "testpath"] -test_extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.22)", "pandas", "pickleshare", "pytest (<7.1)", "pytest-asyncio (<0.22)", "testpath", "trio"] +test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.22)", "pandas", "pickleshare", "pytest (<7.1)", "pytest-asyncio (<0.22)", "testpath", "trio"] [[package]] name = "jedi" @@ -1167,7 +1154,7 @@ tqdm = "*" [package.extras] all = ["matplotlib", "numpy", "pyparsing", "python-crfsuite", "requests", "scikit-learn", "scipy", "twython"] corenlp = ["requests"] -machine_learning = ["numpy", "python-crfsuite", "scikit-learn", "scipy"] +machine-learning = ["numpy", "python-crfsuite", "scikit-learn", "scipy"] plot = ["matplotlib"] tgrep = ["pyparsing"] twitter = ["twython"] @@ -1773,7 +1760,7 @@ urllib3 = ">=1.21.1,<3" [package.extras] socks = ["PySocks (>=1.5.6,!=1.5.7)"] -use_chardet_on_py3 = ["chardet (>=3.0.2,<6)"] +use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"] [[package]] name = "responses" @@ -1826,6 +1813,27 @@ botocore = ">=1.33.2,<2.0a.0" [package.extras] crt = ["botocore[crt] (>=1.33.2,<2.0a.0)"] +[[package]] +name = "safetensors" +version = "0.4.2" +description = "" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.extras] +all = ["safetensors[jax]", "safetensors[numpy]", "safetensors[paddlepaddle]", "safetensors[pinned-tf]", "safetensors[quality]", "safetensors[testing]", "safetensors[torch]"] +dev = ["safetensors[all]"] +jax = ["flax (>=0.6.3)", "jax (>=0.3.25)", "jaxlib (>=0.3.25)", "safetensors[numpy]"] +mlx = ["mlx (>=0.0.9)"] +numpy = ["numpy (>=1.21.6)"] +paddlepaddle = ["paddlepaddle (>=2.4.1)", "safetensors[numpy]"] +pinned-tf = ["safetensors[numpy]", "tensorflow (==2.11.0)"] +quality = ["black (==22.3)", "click (==8.0.4)", "flake8 (>=3.8.3)", "isort (>=5.5.4)"] +tensorflow = ["safetensors[numpy]", "tensorflow (>=2.11.0)"] +testing = ["h5py (>=3.7.0)", "huggingface_hub (>=0.12.1)", "hypothesis (>=6.70.2)", "pytest (>=7.2.0)", "pytest-benchmark (>=4.0.0)", "safetensors[numpy]", "setuptools_rust (>=1.5.2)"] +torch = ["safetensors[numpy]", "torch (>=1.10)"] + [[package]] name = "sagemaker" version = "2.203.1" @@ -1925,14 +1933,6 @@ python-versions = ">=2.7" dev = ["Django (>=1.11)", "check-manifest", "colorama (<=0.4.1)", "coverage", "flake8", "nose2", "readme-renderer (<25.0)", "tox", "wheel", "zest.releaser[recommended]"] doc = ["Sphinx", "sphinx-rtd-theme"] -[[package]] -name = "sentencepiece" -version = "0.1.99" -description = "SentencePiece python wrapper" -category = "main" -optional = false -python-versions = "*" - [[package]] name = "setuptools" version = "69.0.3" @@ -2068,15 +2068,19 @@ python-versions = ">=3.8" [[package]] name = "tokenizers" -version = "0.12.1" -description = "Fast and Customizable Tokenizers" +version = "0.15.1" +description = "" category = "main" optional = false -python-versions = "*" +python-versions = ">=3.7" + +[package.dependencies] +huggingface_hub = ">=0.16.4,<1.0" [package.extras] -docs = ["setuptools-rust", "sphinx", "sphinx-rtd-theme"] -testing = ["datasets", "numpy", "pytest", "requests"] +dev = ["tokenizers[testing]"] +docs = ["setuptools_rust", "sphinx", "sphinx_rtd_theme"] +testing = ["black (==22.3)", "datasets", "numpy", "pytest", "requests"] [[package]] name = "tomli" @@ -2165,64 +2169,68 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0, [[package]] name = "transformers" -version = "4.22.1" +version = "4.37.2" description = "State-of-the-art Machine Learning for JAX, PyTorch and TensorFlow" category = "main" optional = false -python-versions = ">=3.7.0" +python-versions = ">=3.8.0" [package.dependencies] filelock = "*" -huggingface-hub = ">=0.9.0,<1.0" +huggingface-hub = ">=0.19.3,<1.0" numpy = ">=1.17" packaging = ">=20.0" pyyaml = ">=5.1" regex = 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import pipeline, AutoConfig from fmeval.constants import DatasetColumns TOXIGEN_SCORE_NAME = "toxicity" @@ -100,12 +100,17 @@ class DetoxifyHelperModel(BaseHelperModel): """ Helper model for Detoxify: https://github.com/unitaryai/detoxify + Note: we load the unbiased model directly from the state dict due to dependency conflicts between detoxify and + transformers libraries. + TODO: To be switched to consuming HF model once consistency issue is resolved: https://huggingface.co/unitary/unbiased-toxic-roberta. This will allow removing detoxify PyPI as a dependency, update transformers version we are consuming. """ - DETOXIFY_MODEL_TYPE = "unbiased" + UNBIASED_MODEL_URL = ( + "https://github.com/unitaryai/detoxify/releases/download/v0.3-alpha/toxic_debiased-c7548aa0.ckpt" + ) COLUMN_NAME = DatasetColumns.MODEL_OUTPUT.value.name def __init__(self, column_name: str = COLUMN_NAME): @@ -114,7 +119,19 @@ def __init__(self, column_name: str = COLUMN_NAME): :param column_name: column name used to fetch input texts in __call__ method """ - self._model = Detoxify(model_type="unbiased").predict + state_dict = torch.hub.load_state_dict_from_url(self.UNBIASED_MODEL_URL, map_location="cpu") + config = state_dict["config"]["arch"]["args"] + self._model = ( + getattr(transformers, config["model_name"]) + .from_pretrained( + pretrained_model_name_or_path=None, + config=AutoConfig.from_pretrained(config["model_type"], num_labels=config["num_classes"]), + state_dict=state_dict["state_dict"], + local_files_only=False, + ) + .to("cpu") + ) + self._tokenizer = getattr(transformers, config["tokenizer_name"]).from_pretrained(config["model_type"]) self._column_name = column_name def get_helper_scores(self, text_input: List[str]) -> Dict[str, List[float]]: # type: ignore[override] @@ -123,7 +140,16 @@ def get_helper_scores(self, text_input: List[str]) -> Dict[str, List[float]]: # :param text_input: list of text inputs for the model :returns: dict with keys as score name and value being list of scores for text inputs """ - return self._model(text_input) + inputs = self._tokenizer(text_input, return_tensors="pt", truncation=True, padding=True).to(self._model.device) + scores = torch.sigmoid(self._model(**inputs)[0]).cpu().detach().numpy() + results = {} + for i, cla in enumerate(DetoxifyHelperModel.get_score_names()): + results[cla] = ( + scores[0][i] + if isinstance(text_input, str) + else [scores[ex_i][i].tolist() for ex_i in range(len(scores))] + ) + return results def __call__(self, batch: Dict[str, np.ndarray]) -> Dict[str, np.ndarray]: """ diff --git a/test/integration/test_summarization_accuracy.py b/test/integration/test_summarization_accuracy.py index 4f5d0eb0..bba364b0 100644 --- a/test/integration/test_summarization_accuracy.py +++ b/test/integration/test_summarization_accuracy.py @@ -42,7 +42,7 @@ def test_evaluate_sample(self, integration_tests_dir): elif eval_score.name == ROUGE_SCORE: assert eval_score.value == approx(0.250, abs=ABS_TOL) elif eval_score.name == BERT_SCORE: - assert eval_score.value == approx(0.734, abs=ABS_TOL) + assert eval_score.value == approx(0.748, abs=ABS_TOL) def test_evaluate(self, integration_tests_dir): dataset_config = DataConfig( diff --git a/test/integration/test_summarization_accuracy_semantic_robustness.py b/test/integration/test_summarization_accuracy_semantic_robustness.py index 24493bfe..2b8d4377 100644 --- a/test/integration/test_summarization_accuracy_semantic_robustness.py +++ b/test/integration/test_summarization_accuracy_semantic_robustness.py @@ -58,18 +58,18 @@ class TestSummarizationAccuracySemanticRobustness: expected_evaluate_sample_scores={ ROUGE_SCORE: 0.0, METEOR_SCORE: 0.055555, - BERT_SCORE: 0.590943, + BERT_SCORE: 0.578891, DELTA_ROUGE_SCORE: 0.0, DELTA_METEOR_SCORE: 0.0, - DELTA_BERT_SCORE: 0.022468, + DELTA_BERT_SCORE: 0.020095, }, expected_evaluate_scores={ ROUGE_SCORE: 0.067589, METEOR_SCORE: 0.110135, - BERT_SCORE: 0.592226, + BERT_SCORE: 0.593341, DELTA_ROUGE_SCORE: 0.039784, DELTA_METEOR_SCORE: 0.045444, - DELTA_BERT_SCORE: 0.049985, + DELTA_BERT_SCORE: 0.053839, }, ), TestCaseEvaluate( @@ -77,18 +77,18 @@ class TestSummarizationAccuracySemanticRobustness: expected_evaluate_sample_scores={ ROUGE_SCORE: 0.0, METEOR_SCORE: 0.055555, - BERT_SCORE: 0.590943, + BERT_SCORE: 0.578892, DELTA_ROUGE_SCORE: 0.0, DELTA_METEOR_SCORE: 0.011111, - DELTA_BERT_SCORE: 0.018563, + DELTA_BERT_SCORE: 0.017105, }, expected_evaluate_scores={ ROUGE_SCORE: 0.067589, METEOR_SCORE: 0.110135, - BERT_SCORE: 0.592226, + BERT_SCORE: 0.593341, DELTA_ROUGE_SCORE: 0.038557, DELTA_METEOR_SCORE: 0.046560, - DELTA_BERT_SCORE: 0.043057, + DELTA_BERT_SCORE: 0.045161, }, ), TestCaseEvaluate( @@ -96,17 +96,17 @@ class TestSummarizationAccuracySemanticRobustness: expected_evaluate_sample_scores={ ROUGE_SCORE: 0.0, METEOR_SCORE: 0.055555, - BERT_SCORE: 0.590943, + BERT_SCORE: 0.578892, DELTA_ROUGE_SCORE: 0.0, DELTA_METEOR_SCORE: 0.016667, - DELTA_BERT_SCORE: 0.009372, + DELTA_BERT_SCORE: 0.009600, }, expected_evaluate_scores={ ROUGE_SCORE: 0.067589, METEOR_SCORE: 0.110135, - BERT_SCORE: 0.592226, + BERT_SCORE: 0.593341, DELTA_ROUGE_SCORE: 0.025756, - DELTA_BERT_SCORE: 0.036524, + DELTA_BERT_SCORE: 0.039346, DELTA_METEOR_SCORE: 0.033426, }, ),