From 79d9689de782ef687a0c5265576f54e8e4d508d2 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Fri, 12 Sep 2025 09:51:03 +0530 Subject: [PATCH 01/16] feat: integrate llms.txt documentation tools with enhanced MCP client guidance - Add new llms_txt.py module with domain-secured documentation fetching - Implement list_doc_sources, fetch_llms_txt_content, fetch_documentation, and add_doc_source functions - Add MCP tool definitions in server.py with clear 'WHEN TO USE' guidance for clients - Update tool descriptions to guide MCP clients (Claude, Cursor) on proper usage for Atlan product questions - Add httpx dependency for async HTTP requests - Configure default Atlan documentation source with domain security - All examples updated to reflect Atlan-specific use cases --- modelcontextprotocol/pyproject.toml | 1 + modelcontextprotocol/server.py | 185 ++++ modelcontextprotocol/tools/__init__.py | 10 + modelcontextprotocol/tools/llms_txt.py | 243 +++++ modelcontextprotocol/uv.lock | 1150 +++++++++++++++++------- 5 files changed, 1257 insertions(+), 332 deletions(-) create mode 100644 modelcontextprotocol/tools/llms_txt.py diff --git a/modelcontextprotocol/pyproject.toml b/modelcontextprotocol/pyproject.toml index b10b084..ee49ac3 100644 --- a/modelcontextprotocol/pyproject.toml +++ b/modelcontextprotocol/pyproject.toml @@ -18,6 +18,7 @@ classifiers = [ dependencies = [ "fastmcp==2.11.0", "pyatlan>=6.0.1", + "httpx>=0.25.0", ] [project.scripts] diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index e8a29fd..7a1fa98 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -11,6 +11,10 @@ create_glossary_category_assets, create_glossary_assets, create_glossary_term_assets, + list_doc_sources, + fetch_llms_txt_content, + fetch_documentation, + add_doc_source, UpdatableAttribute, CertificateStatus, UpdatableAsset, @@ -694,6 +698,187 @@ def create_glossary_categories(categories) -> List[Dict[str, Any]]: return create_glossary_category_assets(categories) +@mcp.tool() +def list_doc_sources_tool() -> List[Dict[str, Any]]: + """ + 🔍 WHEN TO USE: Call this tool when users ask questions about Atlan products, features, or documentation. + + List all available llms.txt documentation sources configured in the server. + Use this as the first step when users have product-related questions to see what + documentation sources are available for answering their queries. + + This tool shows all documentation sources that can be used with fetch_docs_tool. + Each source includes the llms.txt URL and allowed domains for security. + + Returns: + List[Dict[str, Any]]: List of documentation sources with: + - name: Source name/identifier + - llms_txt_url: URL to the llms.txt file + - allowed_domains: List of domains allowed for fetching docs + + Examples: + # When user asks "How do I use Atlan's data catalog?" - start here + sources = list_doc_sources_tool() + + # Example response: + [ + { + "name": "Atlan Docs", + "llms_txt_url": "https://docs.atlan.com/llms.txt", + "allowed_domains": ["docs.atlan.com"] + } + ] + """ + return list_doc_sources() + + +@mcp.tool() +async def fetch_llms_txt_tool(source_name: str) -> Dict[str, Any]: + """ + 📋 WHEN TO USE: Call this after list_doc_sources_tool when you need to see what specific + documentation topics are available for a source before answering user product questions. + + Fetch and parse llms.txt content from a specific documentation source. + + This tool retrieves the llms.txt file from a configured source and parses + it to extract available documentation URLs that you can then fetch with fetch_docs_tool. + + Args: + source_name (str): Name of the documentation source to fetch from. + Use list_doc_sources_tool to see available sources. + + Returns: + Dict[str, Any]: Contains: + - source: Source name + - llms_txt_url: URL of the llms.txt file + - content: Raw llms.txt content + - parsed_urls: List of documentation URLs found + - allowed_domains: Domains allowed for this source + - error: Error message if fetch failed + + Examples: + # When user asks "How do I set up lineage in Atlan?" - check what docs are available + result = await fetch_llms_txt_tool("Atlan Docs") + + # Check available URLs to find lineage-related documentation + if "parsed_urls" in result: + for url in result["parsed_urls"]: + if "lineage" in url.lower(): + # Found relevant doc, now fetch it with fetch_docs_tool + pass + """ + return await fetch_llms_txt_content(source_name) + + +@mcp.tool() +async def fetch_docs_tool(url: str, source_names: str = None) -> Dict[str, Any]: + """ + 📖 WHEN TO USE: This is the KEY tool for answering Atlan product questions! + Call this to fetch specific Atlan documentation content that directly answers user questions. + + Fetch documentation content from a URL with domain security checks. + + This tool fetches documentation from URLs found in llms.txt files and returns the full + content that you can use to provide comprehensive, accurate answers about Atlan products, + features, APIs, integrations, and usage instructions. + + Args: + url (str): The documentation URL to fetch content from (from fetch_llms_txt_tool results). + source_names (str, optional): Comma-separated list of source names to restrict + domain checking. If not provided, checks against all configured sources. + + Returns: + Dict[str, Any]: Contains: + - url: The requested URL + - content: Fetched documentation content (if successful) - USE THIS TO ANSWER QUESTIONS + - content_length: Length of the content + - matching_sources: Sources that allow this domain + - success: Boolean indicating if fetch was successful + - error: Error message if fetch failed + - available_sources: List of available sources (on error) + - allowed_domains: List of allowed domains (on error) + + Security: + - Only domains explicitly allowed by configured sources can be accessed + - Prevents unauthorized access to random websites + - Domain matching includes both exact matches and subdomain matches + + Examples: + # When user asks "How do I configure Atlan's data lineage?" + result = await fetch_docs_tool("https://docs.atlan.com/setup/lineage") + if result["success"]: + # Use result["content"] to provide detailed answer about lineage setup + + # When user asks "What are Atlan's asset types?" + result = await fetch_docs_tool("https://docs.atlan.com/concepts/assets") + if result["success"]: + # Use result["content"] to explain asset types comprehensively + """ + # Parse source_names if provided + parsed_source_names = None + if source_names: + parsed_source_names = [name.strip() for name in source_names.split(",")] + + return await fetch_documentation(url, parsed_source_names) + + +@mcp.tool() +def add_doc_source_tool(name: str, llms_txt_url: str, allowed_domains: str = None) -> Dict[str, str]: + """ + ➕ WHEN TO USE: Call this when users need access to additional product documentation + sources beyond the default Atlan docs (e.g., partner integrations, custom tools). + + Add a new documentation source to the server configuration. + + This tool allows adding custom llms.txt sources with their allowed domains + for documentation fetching. Use when users need documentation from sources + not currently configured in the server. + + Args: + name (str): Unique name/identifier for the documentation source. + llms_txt_url (str): URL to the llms.txt file for this source. + allowed_domains (str, optional): Comma-separated list of allowed domains. + If not provided, the domain is auto-extracted from llms_txt_url. + + Returns: + Dict[str, str]: Success or error message: + - success: Success message if source was added + - error: Error message if addition failed + + Security Note: + - Allowed domains control which URLs can be fetched with fetch_docs_tool + - Use '*' as a domain to allow all domains (not recommended for security) + - Domains support both exact matches and subdomain matching + + Examples: + # When user asks about Snowflake integration with Atlan + result = add_doc_source_tool( + name="Snowflake Docs", + llms_txt_url="https://docs.snowflake.com/llms.txt" + ) + + # When user needs access to partner documentation + result = add_doc_source_tool( + name="Partner Integration Docs", + llms_txt_url="https://partner-docs.example.com/llms.txt", + allowed_domains="partner-docs.example.com,help.example.com" + ) + + # Check result + if "success" in result: + # Source added successfully, can now use with other tools + pass + else: + print(f"Error: {result['error']}") + """ + # Parse allowed_domains if provided + parsed_domains = None + if allowed_domains: + parsed_domains = [domain.strip() for domain in allowed_domains.split(",")] + + return add_doc_source(name, llms_txt_url, parsed_domains) + + def main(): mcp.run() diff --git a/modelcontextprotocol/tools/__init__.py b/modelcontextprotocol/tools/__init__.py index 5e057c5..0c4bf0b 100644 --- a/modelcontextprotocol/tools/__init__.py +++ b/modelcontextprotocol/tools/__init__.py @@ -7,6 +7,12 @@ create_glossary_assets, create_glossary_term_assets, ) +from .llms_txt import ( + list_doc_sources, + fetch_llms_txt_content, + fetch_documentation, + add_doc_source, +) from .models import ( CertificateStatus, UpdatableAttribute, @@ -24,6 +30,10 @@ "create_glossary_category_assets", "create_glossary_assets", "create_glossary_term_assets", + "list_doc_sources", + "fetch_llms_txt_content", + "fetch_documentation", + "add_doc_source", "CertificateStatus", "UpdatableAttribute", "UpdatableAsset", diff --git a/modelcontextprotocol/tools/llms_txt.py b/modelcontextprotocol/tools/llms_txt.py new file mode 100644 index 0000000..6048a8a --- /dev/null +++ b/modelcontextprotocol/tools/llms_txt.py @@ -0,0 +1,243 @@ +""" +LLMS.txt documentation tools for MCP server. +Provides access to llms.txt files and documentation fetching capabilities. +""" + +import os +import re +import json +import httpx +from typing import Dict, List, Any, Optional, Union +from urllib.parse import urlparse, urljoin +from dataclasses import dataclass + + +@dataclass +class DocSource: + """Represents a documentation source with name and llms.txt URL.""" + name: str + llms_txt_url: str + allowed_domains: List[str] + + +class LLMSTxtManager: + """Manages llms.txt documentation sources and fetching.""" + + def __init__(self): + self.sources: Dict[str, DocSource] = {} + self.timeout = 10.0 + self.follow_redirects = False + self._initialize_default_sources() + + def _initialize_default_sources(self): + """Initialize with default documentation sources.""" + default_sources = [ + DocSource( + name="Atlan Docs", + llms_txt_url="https://docs.atlan.com/llms.txt", + allowed_domains=["docs.atlan.com"] + ) + ] + + for source in default_sources: + self.sources[source.name] = source + + def add_source(self, name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None): + """Add a new documentation source.""" + if allowed_domains is None: + # Auto-extract domain from URL + parsed = urlparse(llms_txt_url) + allowed_domains = [parsed.netloc] if parsed.netloc else [] + + self.sources[name] = DocSource( + name=name, + llms_txt_url=llms_txt_url, + allowed_domains=allowed_domains + ) + + def list_sources(self) -> List[Dict[str, Any]]: + """List all available documentation sources.""" + return [ + { + "name": source.name, + "llms_txt_url": source.llms_txt_url, + "allowed_domains": source.allowed_domains + } + for source in self.sources.values() + ] + + def _is_domain_allowed(self, url: str, allowed_domains: List[str]) -> bool: + """Check if URL domain is in allowed domains list.""" + if '*' in allowed_domains: + return True + + parsed = urlparse(url) + domain = parsed.netloc.lower() + + for allowed in allowed_domains: + if domain == allowed.lower() or domain.endswith('.' + allowed.lower()): + return True + + return False + + async def _fetch_content(self, url: str) -> str: + """Fetch content from URL with proper error handling.""" + try: + async with httpx.AsyncClient( + timeout=self.timeout, + follow_redirects=self.follow_redirects + ) as client: + response = await client.get(url) + response.raise_for_status() + return response.text + except httpx.TimeoutException: + raise Exception(f"Timeout fetching {url}") + except httpx.HTTPError as e: + raise Exception(f"HTTP error fetching {url}: {e}") + except Exception as e: + raise Exception(f"Error fetching {url}: {e}") + + async def fetch_llms_txt(self, source_name: str) -> Dict[str, Any]: + """Fetch and parse llms.txt content from a source.""" + if source_name not in self.sources: + raise Exception(f"Unknown source: {source_name}") + + source = self.sources[source_name] + + try: + content = await self._fetch_content(source.llms_txt_url) + + # Parse llms.txt content to extract URLs + lines = content.strip().split('\n') + urls = [] + + for line in lines: + line = line.strip() + if line and not line.startswith('#'): + # Handle different llms.txt formats + if line.startswith('http'): + urls.append(line) + elif ': ' in line and 'http' in line: + # Format: "Title: URL" + parts = line.split(': ', 1) + if len(parts) == 2 and parts[1].startswith('http'): + urls.append(parts[1]) + + return { + "source": source_name, + "llms_txt_url": source.llms_txt_url, + "content": content, + "parsed_urls": urls, + "allowed_domains": source.allowed_domains + } + + except Exception as e: + return { + "source": source_name, + "error": str(e), + "llms_txt_url": source.llms_txt_url + } + + async def fetch_docs(self, url: str, source_names: Optional[List[str]] = None) -> Dict[str, Any]: + """ + Fetch documentation from a URL with domain security checks. + + Args: + url: The URL to fetch + source_names: Optional list of source names to check against their allowed domains. + If None, checks against all sources. + """ + # Determine which sources to check + sources_to_check = [] + if source_names: + for name in source_names: + if name in self.sources: + sources_to_check.append(self.sources[name]) + else: + sources_to_check = list(self.sources.values()) + + # Check if URL is allowed by any source + allowed = False + matching_sources = [] + + for source in sources_to_check: + if self._is_domain_allowed(url, source.allowed_domains): + allowed = True + matching_sources.append(source.name) + + if not allowed: + return { + "url": url, + "error": f"Domain not allowed. URL must be from one of the allowed domains from configured sources.", + "available_sources": [s.name for s in sources_to_check], + "allowed_domains": [domain for s in sources_to_check for domain in s.allowed_domains] + } + + try: + content = await self._fetch_content(url) + + # Basic content parsing - remove excessive whitespace + cleaned_content = re.sub(r'\n\s*\n\s*\n', '\n\n', content) + + return { + "url": url, + "content": cleaned_content, + "content_length": len(content), + "matching_sources": matching_sources, + "success": True + } + + except Exception as e: + return { + "url": url, + "error": str(e), + "matching_sources": matching_sources, + "success": False + } + + +# Global manager instance +llms_txt_manager = LLMSTxtManager() + + +def list_doc_sources() -> List[Dict[str, Any]]: + """List all available llms.txt documentation sources.""" + return llms_txt_manager.list_sources() + + +async def fetch_llms_txt_content(source_name: str) -> Dict[str, Any]: + """Fetch and parse llms.txt content from a specific source.""" + return await llms_txt_manager.fetch_llms_txt(source_name) + + +async def fetch_documentation(url: str, source_names: Optional[List[str]] = None) -> Dict[str, Any]: + """ + Fetch documentation from a URL with domain security. + + Args: + url: The documentation URL to fetch + source_names: Optional list of source names to restrict domain checking + + Returns: + Dict containing the fetched content or error information + """ + return await llms_txt_manager.fetch_docs(url, source_names) + + +def add_doc_source(name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None) -> Dict[str, str]: + """ + Add a new documentation source. + + Args: + name: Name for the source + llms_txt_url: URL to the llms.txt file + allowed_domains: List of allowed domains (auto-detected if not provided) + + Returns: + Success/error message + """ + try: + llms_txt_manager.add_source(name, llms_txt_url, allowed_domains) + return {"success": f"Added 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trailing whitespace in llms_txt.py and server.py - Apply Ruff formatting and linting fixes - All pre-commit checks now passing --- modelcontextprotocol/pyproject.toml | 5 + modelcontextprotocol/server.py | 80 ++++++++-------- modelcontextprotocol/tools/llms_txt.py | 128 +++++++++++++------------ modelcontextprotocol/uv.lock | 92 ++++++++++++++++++ 4 files changed, 205 insertions(+), 100 deletions(-) diff --git a/modelcontextprotocol/pyproject.toml b/modelcontextprotocol/pyproject.toml index ee49ac3..2f7c023 100644 --- a/modelcontextprotocol/pyproject.toml +++ b/modelcontextprotocol/pyproject.toml @@ -40,3 +40,8 @@ packages = ["."] [build-system] requires = ["hatchling"] build-backend = "hatchling.build" + +[dependency-groups] +dev = [ + "pre-commit>=4.3.0", +] diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index 7a1fa98..8162ce3 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -702,28 +702,28 @@ def create_glossary_categories(categories) -> List[Dict[str, Any]]: def list_doc_sources_tool() -> List[Dict[str, Any]]: """ 🔍 WHEN TO USE: Call this tool when users ask questions about Atlan products, features, or documentation. - + List all available llms.txt documentation sources configured in the server. - Use this as the first step when users have product-related questions to see what + Use this as the first step when users have product-related questions to see what documentation sources are available for answering their queries. - + This tool shows all documentation sources that can be used with fetch_docs_tool. Each source includes the llms.txt URL and allowed domains for security. - + Returns: List[Dict[str, Any]]: List of documentation sources with: - name: Source name/identifier - llms_txt_url: URL to the llms.txt file - allowed_domains: List of domains allowed for fetching docs - + Examples: # When user asks "How do I use Atlan's data catalog?" - start here sources = list_doc_sources_tool() - + # Example response: [ { - "name": "Atlan Docs", + "name": "Atlan Docs", "llms_txt_url": "https://docs.atlan.com/llms.txt", "allowed_domains": ["docs.atlan.com"] } @@ -735,31 +735,31 @@ def list_doc_sources_tool() -> List[Dict[str, Any]]: @mcp.tool() async def fetch_llms_txt_tool(source_name: str) -> Dict[str, Any]: """ - 📋 WHEN TO USE: Call this after list_doc_sources_tool when you need to see what specific + 📋 WHEN TO USE: Call this after list_doc_sources_tool when you need to see what specific documentation topics are available for a source before answering user product questions. - + Fetch and parse llms.txt content from a specific documentation source. - + This tool retrieves the llms.txt file from a configured source and parses it to extract available documentation URLs that you can then fetch with fetch_docs_tool. - + Args: source_name (str): Name of the documentation source to fetch from. Use list_doc_sources_tool to see available sources. - + Returns: Dict[str, Any]: Contains: - source: Source name - llms_txt_url: URL of the llms.txt file - - content: Raw llms.txt content + - content: Raw llms.txt content - parsed_urls: List of documentation URLs found - allowed_domains: Domains allowed for this source - error: Error message if fetch failed - + Examples: # When user asks "How do I set up lineage in Atlan?" - check what docs are available result = await fetch_llms_txt_tool("Atlan Docs") - + # Check available URLs to find lineage-related documentation if "parsed_urls" in result: for url in result["parsed_urls"]: @@ -770,23 +770,23 @@ async def fetch_llms_txt_tool(source_name: str) -> Dict[str, Any]: return await fetch_llms_txt_content(source_name) -@mcp.tool() +@mcp.tool() async def fetch_docs_tool(url: str, source_names: str = None) -> Dict[str, Any]: """ - 📖 WHEN TO USE: This is the KEY tool for answering Atlan product questions! + 📖 WHEN TO USE: This is the KEY tool for answering Atlan product questions! Call this to fetch specific Atlan documentation content that directly answers user questions. - + Fetch documentation content from a URL with domain security checks. - + This tool fetches documentation from URLs found in llms.txt files and returns the full content that you can use to provide comprehensive, accurate answers about Atlan products, features, APIs, integrations, and usage instructions. - + Args: url (str): The documentation URL to fetch content from (from fetch_llms_txt_tool results). source_names (str, optional): Comma-separated list of source names to restrict domain checking. If not provided, checks against all configured sources. - + Returns: Dict[str, Any]: Contains: - url: The requested URL @@ -797,19 +797,19 @@ async def fetch_docs_tool(url: str, source_names: str = None) -> Dict[str, Any]: - error: Error message if fetch failed - available_sources: List of available sources (on error) - allowed_domains: List of allowed domains (on error) - + Security: - Only domains explicitly allowed by configured sources can be accessed - Prevents unauthorized access to random websites - Domain matching includes both exact matches and subdomain matches - + Examples: # When user asks "How do I configure Atlan's data lineage?" result = await fetch_docs_tool("https://docs.atlan.com/setup/lineage") if result["success"]: # Use result["content"] to provide detailed answer about lineage setup - - # When user asks "What are Atlan's asset types?" + + # When user asks "What are Atlan's asset types?" result = await fetch_docs_tool("https://docs.atlan.com/concepts/assets") if result["success"]: # Use result["content"] to explain asset types comprehensively @@ -818,52 +818,54 @@ async def fetch_docs_tool(url: str, source_names: str = None) -> Dict[str, Any]: parsed_source_names = None if source_names: parsed_source_names = [name.strip() for name in source_names.split(",")] - + return await fetch_documentation(url, parsed_source_names) @mcp.tool() -def add_doc_source_tool(name: str, llms_txt_url: str, allowed_domains: str = None) -> Dict[str, str]: +def add_doc_source_tool( + name: str, llms_txt_url: str, allowed_domains: str = None +) -> Dict[str, str]: """ - ➕ WHEN TO USE: Call this when users need access to additional product documentation + ➕ WHEN TO USE: Call this when users need access to additional product documentation sources beyond the default Atlan docs (e.g., partner integrations, custom tools). - + Add a new documentation source to the server configuration. - + This tool allows adding custom llms.txt sources with their allowed domains for documentation fetching. Use when users need documentation from sources not currently configured in the server. - + Args: name (str): Unique name/identifier for the documentation source. llms_txt_url (str): URL to the llms.txt file for this source. allowed_domains (str, optional): Comma-separated list of allowed domains. If not provided, the domain is auto-extracted from llms_txt_url. - + Returns: Dict[str, str]: Success or error message: - success: Success message if source was added - error: Error message if addition failed - + Security Note: - Allowed domains control which URLs can be fetched with fetch_docs_tool - Use '*' as a domain to allow all domains (not recommended for security) - Domains support both exact matches and subdomain matching - + Examples: # When user asks about Snowflake integration with Atlan result = add_doc_source_tool( name="Snowflake Docs", llms_txt_url="https://docs.snowflake.com/llms.txt" ) - - # When user needs access to partner documentation + + # When user needs access to partner documentation result = add_doc_source_tool( name="Partner Integration Docs", - llms_txt_url="https://partner-docs.example.com/llms.txt", + llms_txt_url="https://partner-docs.example.com/llms.txt", allowed_domains="partner-docs.example.com,help.example.com" ) - + # Check result if "success" in result: # Source added successfully, can now use with other tools @@ -875,7 +877,7 @@ def add_doc_source_tool(name: str, llms_txt_url: str, allowed_domains: str = Non parsed_domains = None if allowed_domains: parsed_domains = [domain.strip() for domain in allowed_domains.split(",")] - + return add_doc_source(name, llms_txt_url, parsed_domains) diff --git a/modelcontextprotocol/tools/llms_txt.py b/modelcontextprotocol/tools/llms_txt.py index 6048a8a..d734223 100644 --- a/modelcontextprotocol/tools/llms_txt.py +++ b/modelcontextprotocol/tools/llms_txt.py @@ -3,18 +3,17 @@ Provides access to llms.txt files and documentation fetching capabilities. """ -import os import re -import json import httpx -from typing import Dict, List, Any, Optional, Union -from urllib.parse import urlparse, urljoin +from typing import Dict, List, Any, Optional +from urllib.parse import urlparse from dataclasses import dataclass @dataclass class DocSource: """Represents a documentation source with name and llms.txt URL.""" + name: str llms_txt_url: str allowed_domains: List[str] @@ -22,70 +21,69 @@ class DocSource: class LLMSTxtManager: """Manages llms.txt documentation sources and fetching.""" - + def __init__(self): self.sources: Dict[str, DocSource] = {} self.timeout = 10.0 self.follow_redirects = False self._initialize_default_sources() - + def _initialize_default_sources(self): """Initialize with default documentation sources.""" default_sources = [ DocSource( name="Atlan Docs", llms_txt_url="https://docs.atlan.com/llms.txt", - allowed_domains=["docs.atlan.com"] + allowed_domains=["docs.atlan.com"], ) ] - + for source in default_sources: self.sources[source.name] = source - - def add_source(self, name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None): + + def add_source( + self, name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None + ): """Add a new documentation source.""" if allowed_domains is None: # Auto-extract domain from URL parsed = urlparse(llms_txt_url) allowed_domains = [parsed.netloc] if parsed.netloc else [] - + self.sources[name] = DocSource( - name=name, - llms_txt_url=llms_txt_url, - allowed_domains=allowed_domains + name=name, llms_txt_url=llms_txt_url, allowed_domains=allowed_domains ) - + def list_sources(self) -> List[Dict[str, Any]]: """List all available documentation sources.""" return [ { "name": source.name, "llms_txt_url": source.llms_txt_url, - "allowed_domains": source.allowed_domains + "allowed_domains": source.allowed_domains, } for source in self.sources.values() ] - + def _is_domain_allowed(self, url: str, allowed_domains: List[str]) -> bool: """Check if URL domain is in allowed domains list.""" - if '*' in allowed_domains: + if "*" in allowed_domains: return True - + parsed = urlparse(url) domain = parsed.netloc.lower() - + for allowed in allowed_domains: - if domain == allowed.lower() or domain.endswith('.' + allowed.lower()): + if domain == allowed.lower() or domain.endswith("." + allowed.lower()): return True - + return False - + async def _fetch_content(self, url: str) -> str: """Fetch content from URL with proper error handling.""" try: async with httpx.AsyncClient( - timeout=self.timeout, - follow_redirects=self.follow_redirects + timeout=self.timeout, follow_redirects=self.follow_redirects ) as client: response = await client.get(url) response.raise_for_status() @@ -96,52 +94,54 @@ async def _fetch_content(self, url: str) -> str: raise Exception(f"HTTP error fetching {url}: {e}") except Exception as e: raise Exception(f"Error fetching {url}: {e}") - + async def fetch_llms_txt(self, source_name: str) -> Dict[str, Any]: """Fetch and parse llms.txt content from a source.""" if source_name not in self.sources: raise Exception(f"Unknown source: {source_name}") - + source = self.sources[source_name] - + try: content = await self._fetch_content(source.llms_txt_url) - + # Parse llms.txt content to extract URLs - lines = content.strip().split('\n') + lines = content.strip().split("\n") urls = [] - + for line in lines: line = line.strip() - if line and not line.startswith('#'): + if line and not line.startswith("#"): # Handle different llms.txt formats - if line.startswith('http'): + if line.startswith("http"): urls.append(line) - elif ': ' in line and 'http' in line: + elif ": " in line and "http" in line: # Format: "Title: URL" - parts = line.split(': ', 1) - if len(parts) == 2 and parts[1].startswith('http'): + parts = line.split(": ", 1) + if len(parts) == 2 and parts[1].startswith("http"): urls.append(parts[1]) - + return { "source": source_name, "llms_txt_url": source.llms_txt_url, "content": content, "parsed_urls": urls, - "allowed_domains": source.allowed_domains + "allowed_domains": source.allowed_domains, } - + except Exception as e: return { "source": source_name, "error": str(e), - "llms_txt_url": source.llms_txt_url + "llms_txt_url": source.llms_txt_url, } - - async def fetch_docs(self, url: str, source_names: Optional[List[str]] = None) -> Dict[str, Any]: + + async def fetch_docs( + self, url: str, source_names: Optional[List[str]] = None + ) -> Dict[str, Any]: """ Fetch documentation from a URL with domain security checks. - + Args: url: The URL to fetch source_names: Optional list of source names to check against their allowed domains. @@ -155,44 +155,46 @@ async def fetch_docs(self, url: str, source_names: Optional[List[str]] = None) - sources_to_check.append(self.sources[name]) else: sources_to_check = list(self.sources.values()) - + # Check if URL is allowed by any source allowed = False matching_sources = [] - + for source in sources_to_check: if self._is_domain_allowed(url, source.allowed_domains): allowed = True matching_sources.append(source.name) - + if not allowed: return { "url": url, - "error": f"Domain not allowed. URL must be from one of the allowed domains from configured sources.", + "error": "Domain not allowed. URL must be from one of the allowed domains from configured sources.", "available_sources": [s.name for s in sources_to_check], - "allowed_domains": [domain for s in sources_to_check for domain in s.allowed_domains] + "allowed_domains": [ + domain for s in sources_to_check for domain in s.allowed_domains + ], } - + try: content = await self._fetch_content(url) - + # Basic content parsing - remove excessive whitespace - cleaned_content = re.sub(r'\n\s*\n\s*\n', '\n\n', content) - + cleaned_content = re.sub(r"\n\s*\n\s*\n", "\n\n", content) + return { "url": url, "content": cleaned_content, "content_length": len(content), "matching_sources": matching_sources, - "success": True + "success": True, } - + except Exception as e: return { "url": url, "error": str(e), "matching_sources": matching_sources, - "success": False + "success": False, } @@ -210,29 +212,33 @@ async def fetch_llms_txt_content(source_name: str) -> Dict[str, Any]: return await llms_txt_manager.fetch_llms_txt(source_name) -async def fetch_documentation(url: str, source_names: Optional[List[str]] = None) -> Dict[str, Any]: +async def fetch_documentation( + url: str, source_names: Optional[List[str]] = None +) -> Dict[str, Any]: """ Fetch documentation from a URL with domain security. - + Args: url: The documentation URL to fetch source_names: Optional list of source names to restrict domain checking - + Returns: Dict containing the fetched content or error information """ return await llms_txt_manager.fetch_docs(url, source_names) -def add_doc_source(name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None) -> Dict[str, str]: +def add_doc_source( + name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None +) -> Dict[str, str]: """ Add a new documentation source. - + Args: name: Name for the source llms_txt_url: URL to the llms.txt file allowed_domains: List of allowed domains (auto-detected if not provided) - + Returns: Success/error message """ diff --git 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{ name = "nodeenv" }, + { name = "pyyaml" }, + { name = "virtualenv" }, +] +sdist = { url = "https://files.pythonhosted.org/packages/ff/29/7cf5bbc236333876e4b41f56e06857a87937ce4bf91e117a6991a2dbb02a/pre_commit-4.3.0.tar.gz", hash = "sha256:499fe450cc9d42e9d58e606262795ecb64dd05438943c62b66f6a8673da30b16", size = 193792 } +wheels = [ + { url = "https://files.pythonhosted.org/packages/5b/a5/987a405322d78a73b66e39e4a90e4ef156fd7141bf71df987e50717c321b/pre_commit-4.3.0-py2.py3-none-any.whl", hash = "sha256:2b0747ad7e6e967169136edffee14c16e148a778a54e4f967921aa1ebf2308d8", size = 220965 }, +] + [[package]] name = "pyatlan" version = "8.0.2" @@ -1246,6 +1324,20 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/61/14/33a3a1352cfa71812a3a21e8c9bfb83f60b0011f5e36f2b1399d51928209/uvicorn-0.34.0-py3-none-any.whl", hash = "sha256:023dc038422502fa28a09c7a30bf2b6991512da7dcdb8fd35fe57cfc154126f4", size = 62315 }, ] +[[package]] +name = "virtualenv" +version = "20.34.0" +source = { registry = "https://pypi.org/simple" } +dependencies = [ + { name = "distlib" }, + { name = "filelock" }, + { name = "platformdirs" }, +] +sdist = { url = "https://files.pythonhosted.org/packages/1c/14/37fcdba2808a6c615681cd216fecae00413c9dab44fb2e57805ecf3eaee3/virtualenv-20.34.0.tar.gz", hash = "sha256:44815b2c9dee7ed86e387b842a84f20b93f7f417f95886ca1996a72a4138eb1a", size = 6003808 } +wheels = [ + { url = "https://files.pythonhosted.org/packages/76/06/04c8e804f813cf972e3262f3f8584c232de64f0cde9f703b46cf53a45090/virtualenv-20.34.0-py3-none-any.whl", hash = "sha256:341f5afa7eee943e4984a9207c025feedd768baff6753cd660c857ceb3e36026", size = 5983279 }, +] + [[package]] name = "werkzeug" version = "3.1.1" From e19099792cc6fa65cc59fec0277ecf11e7999a4c Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Fri, 12 Sep 2025 10:42:00 +0530 Subject: [PATCH 03/16] fix: resolve MCP timeout issues and improve HTTP client error handling - Increase HTTP timeout from 10s to 30s for documentation fetching - Enable redirects for documentation URLs - Improve HTTP exception handling with specific error types - Fix trailing comma syntax in HTTP client configuration - Remove unsupported request_timeout parameter from FastMCP initialization --- modelcontextprotocol/server.py | 2 +- modelcontextprotocol/tools/llms_txt.py | 17 ++++++++++------- 2 files changed, 11 insertions(+), 8 deletions(-) diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index 8162ce3..770551d 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -27,7 +27,7 @@ from middleware import ToolRestrictionMiddleware -mcp = FastMCP("Atlan MCP Server", dependencies=["pyatlan", "fastmcp"]) +mcp = FastMCP("Atlan MCP Server") # Get restricted tools from environment variable or use default restricted_tools_env = os.getenv("RESTRICTED_TOOLS", "") diff --git a/modelcontextprotocol/tools/llms_txt.py b/modelcontextprotocol/tools/llms_txt.py index d734223..28aaab5 100644 --- a/modelcontextprotocol/tools/llms_txt.py +++ b/modelcontextprotocol/tools/llms_txt.py @@ -24,8 +24,8 @@ class LLMSTxtManager: def __init__(self): self.sources: Dict[str, DocSource] = {} - self.timeout = 10.0 - self.follow_redirects = False + self.timeout = 30.0 # Increased timeout for documentation fetching + self.follow_redirects = True # Allow redirects for documentation URLs self._initialize_default_sources() def _initialize_default_sources(self): @@ -83,17 +83,20 @@ async def _fetch_content(self, url: str) -> str: """Fetch content from URL with proper error handling.""" try: async with httpx.AsyncClient( - timeout=self.timeout, follow_redirects=self.follow_redirects + timeout=httpx.Timeout(self.timeout, read=self.timeout), + follow_redirects=self.follow_redirects, ) as client: response = await client.get(url) response.raise_for_status() return response.text except httpx.TimeoutException: - raise Exception(f"Timeout fetching {url}") - except httpx.HTTPError as e: - raise Exception(f"HTTP error fetching {url}: {e}") + raise Exception(f"Timeout fetching {url} after {self.timeout}s") + except httpx.RequestError as e: + raise Exception(f"Request error fetching {url}: {e}") + except httpx.HTTPStatusError as e: + raise Exception(f"HTTP {e.response.status_code} error fetching {url}: {e}") except Exception as e: - raise Exception(f"Error fetching {url}: {e}") + raise Exception(f"Unexpected error fetching {url}: {e}") async def fetch_llms_txt(self, source_name: str) -> Dict[str, Any]: """Fetch and parse llms.txt content from a source.""" From 3c6ccd7056ae57176e8480b7bedde657195d4ca2 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Fri, 12 Sep 2025 12:40:05 +0530 Subject: [PATCH 04/16] docs: update README with llms.txt documentation tools integration - Add Documentation Tools section to Available Tools table - Include list_doc_sources, fetch_llms_txt, fetch_docs, and add_doc_source tools - Update Tool Access Control section with documentation tool restrictions - Organize tools into Asset Management and Documentation categories - Add usage guidance for documentation tools with domain security notes --- modelcontextprotocol/README.md | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) diff --git a/modelcontextprotocol/README.md b/modelcontextprotocol/README.md index 8186a21..7e12d46 100644 --- a/modelcontextprotocol/README.md +++ b/modelcontextprotocol/README.md @@ -137,6 +137,8 @@ Open `Cursor > Settings > Tools & Integrations > New MCP Server` to include the ## Available Tools +### Atlan Asset Management Tools + | Tool | Description | | ------------------- | ----------------------------------------------------------------- | | `search_assets` | Search for assets based on conditions | @@ -147,6 +149,17 @@ Open `Cursor > Settings > Tools & Integrations > New MCP Server` to include the | `create_glossary_categories` | Create glossary categories | | `create_glossary_terms` | Create glossary terms | +### Documentation Tools + +| Tool | Description | +| ------------------- | ----------------------------------------------------------------- | +| `list_doc_sources` | List available documentation sources (Atlan docs, etc.) | +| `fetch_llms_txt` | Fetch and parse llms.txt content from documentation sources | +| `fetch_docs` | Fetch specific documentation content from URLs with domain security | +| `add_doc_source` | Add new documentation sources for fetching | + +> **📖 Documentation Tools Usage**: These tools enable AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. The tools automatically handle domain security and content parsing. + ## Tool Access Control The Atlan MCP Server includes a configurable tool restriction middleware that allows you to control which tools are available to users. This is useful for implementing role-based access control or restricting certain operations in specific environments. @@ -204,6 +217,7 @@ You can restrict access to specific tools using the `RESTRICTED_TOOLS` environme You can restrict any of the following tools: +#### Asset Management Tools - `search_assets_tool` - Asset search functionality - `get_assets_by_dsl_tool` - DSL query execution - `traverse_lineage_tool` - Lineage traversal @@ -212,6 +226,12 @@ You can restrict any of the following tools: - `create_glossary_categories` - Category creation - `create_glossary_terms` - Term creation +#### Documentation Tools +- `list_doc_sources_tool` - List available documentation sources +- `fetch_llms_txt_tool` - Fetch llms.txt content from sources +- `fetch_docs_tool` - Fetch documentation content from URLs +- `add_doc_source_tool` - Add new documentation sources + ### Common Use Cases #### Read-Only Access From 3b45801395510fa236a2a2e3ebb3f0878e81afcc Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Mon, 15 Sep 2025 21:09:35 +0530 Subject: [PATCH 05/16] feat: unify 4 documentation tools into single documentation_tool - Combine list_doc_sources, fetch_llms_txt, fetch_docs, and add_doc_source into one tool - Add action-based interface with list_sources, fetch_index, fetch_content, add_source actions - Simplify API from 4 tools to 1 unified tool while maintaining all functionality - Update README documentation to reflect single documentation tool - Streamline tool access control configuration - Tested successfully with streamable HTTP transport --- modelcontextprotocol/README.md | 12 +- modelcontextprotocol/server.py | 259 +++++++++++++-------------------- 2 files changed, 104 insertions(+), 167 deletions(-) diff --git a/modelcontextprotocol/README.md b/modelcontextprotocol/README.md index 7e12d46..c8722c8 100644 --- a/modelcontextprotocol/README.md +++ b/modelcontextprotocol/README.md @@ -153,12 +153,9 @@ Open `Cursor > Settings > Tools & Integrations > New MCP Server` to include the | Tool | Description | | ------------------- | ----------------------------------------------------------------- | -| `list_doc_sources` | List available documentation sources (Atlan docs, etc.) | -| `fetch_llms_txt` | Fetch and parse llms.txt content from documentation sources | -| `fetch_docs` | Fetch specific documentation content from URLs with domain security | -| `add_doc_source` | Add new documentation sources for fetching | +| `documentation` | Unified tool for all documentation operations with actions: `list_sources`, `fetch_index`, `fetch_content`, `add_source` | -> **📖 Documentation Tools Usage**: These tools enable AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. The tools automatically handle domain security and content parsing. +> **📖 Documentation Tool Usage**: This unified tool enables AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. It automatically handles domain security, content parsing, and provides a streamlined interface for all documentation operations. ## Tool Access Control @@ -227,10 +224,7 @@ You can restrict any of the following tools: - `create_glossary_terms` - Term creation #### Documentation Tools -- `list_doc_sources_tool` - List available documentation sources -- `fetch_llms_txt_tool` - Fetch llms.txt content from sources -- `fetch_docs_tool` - Fetch documentation content from URLs -- `add_doc_source_tool` - Add new documentation sources +- `documentation_tool` - Unified documentation tool (all actions: list_sources, fetch_index, fetch_content, add_source) ### Common Use Cases diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index 770551d..6419259 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -699,186 +699,129 @@ def create_glossary_categories(categories) -> List[Dict[str, Any]]: @mcp.tool() -def list_doc_sources_tool() -> List[Dict[str, Any]]: +async def documentation_tool( + action: str, + source_name: str = None, + url: str = None, + llms_txt_url: str = None, + allowed_domains: str = None, + source_names: str = None, +) -> Dict[str, Any]: """ - 🔍 WHEN TO USE: Call this tool when users ask questions about Atlan products, features, or documentation. + 📚 UNIFIED DOCUMENTATION TOOL - Your one-stop solution for all Atlan documentation needs! - List all available llms.txt documentation sources configured in the server. - Use this as the first step when users have product-related questions to see what - documentation sources are available for answering their queries. + 🔍 WHEN TO USE: Call this tool whenever users ask questions about Atlan products, features, + APIs, integrations, or need any documentation-related assistance. - This tool shows all documentation sources that can be used with fetch_docs_tool. - Each source includes the llms.txt URL and allowed domains for security. - - Returns: - List[Dict[str, Any]]: List of documentation sources with: - - name: Source name/identifier - - llms_txt_url: URL to the llms.txt file - - allowed_domains: List of domains allowed for fetching docs - - Examples: - # When user asks "How do I use Atlan's data catalog?" - start here - sources = list_doc_sources_tool() - - # Example response: - [ - { - "name": "Atlan Docs", - "llms_txt_url": "https://docs.atlan.com/llms.txt", - "allowed_domains": ["docs.atlan.com"] - } - ] - """ - return list_doc_sources() - - -@mcp.tool() -async def fetch_llms_txt_tool(source_name: str) -> Dict[str, Any]: - """ - 📋 WHEN TO USE: Call this after list_doc_sources_tool when you need to see what specific - documentation topics are available for a source before answering user product questions. - - Fetch and parse llms.txt content from a specific documentation source. - - This tool retrieves the llms.txt file from a configured source and parses - it to extract available documentation URLs that you can then fetch with fetch_docs_tool. + This powerful unified tool handles all documentation operations through different actions: + - list_sources: Discover available documentation sources + - fetch_index: Explore topics available in a documentation source + - fetch_content: Retrieve specific documentation content to answer questions + - add_source: Add new documentation sources for extended coverage Args: - source_name (str): Name of the documentation source to fetch from. - Use list_doc_sources_tool to see available sources. + action (str): The operation to perform. Must be one of: + - "list_sources": List all available documentation sources + - "fetch_index": Fetch and parse llms.txt content from a source + - "fetch_content": Fetch documentation content from a specific URL + - "add_source": Add a new documentation source + + source_name (str, optional): Name of documentation source (for fetch_index) + url (str, optional): Documentation URL to fetch content from (for fetch_content) + llms_txt_url (str, optional): URL to llms.txt file (for add_source) + allowed_domains (str, optional): Comma-separated domains (for add_source) + source_names (str, optional): Comma-separated source names for domain checking (for fetch_content) Returns: - Dict[str, Any]: Contains: - - source: Source name - - llms_txt_url: URL of the llms.txt file - - content: Raw llms.txt content - - parsed_urls: List of documentation URLs found - - allowed_domains: Domains allowed for this source - - error: Error message if fetch failed - - Examples: - # When user asks "How do I set up lineage in Atlan?" - check what docs are available - result = await fetch_llms_txt_tool("Atlan Docs") - - # Check available URLs to find lineage-related documentation - if "parsed_urls" in result: - for url in result["parsed_urls"]: - if "lineage" in url.lower(): - # Found relevant doc, now fetch it with fetch_docs_tool - pass - """ - return await fetch_llms_txt_content(source_name) - - -@mcp.tool() -async def fetch_docs_tool(url: str, source_names: str = None) -> Dict[str, Any]: - """ - 📖 WHEN TO USE: This is the KEY tool for answering Atlan product questions! - Call this to fetch specific Atlan documentation content that directly answers user questions. - - Fetch documentation content from a URL with domain security checks. + Dict[str, Any]: Response varies by action: - This tool fetches documentation from URLs found in llms.txt files and returns the full - content that you can use to provide comprehensive, accurate answers about Atlan products, - features, APIs, integrations, and usage instructions. - - Args: - url (str): The documentation URL to fetch content from (from fetch_llms_txt_tool results). - source_names (str, optional): Comma-separated list of source names to restrict - domain checking. If not provided, checks against all configured sources. - - Returns: - Dict[str, Any]: Contains: - - url: The requested URL - - content: Fetched documentation content (if successful) - USE THIS TO ANSWER QUESTIONS - - content_length: Length of the content - - matching_sources: Sources that allow this domain - - success: Boolean indicating if fetch was successful - - error: Error message if fetch failed - - available_sources: List of available sources (on error) - - allowed_domains: List of allowed domains (on error) - - Security: - - Only domains explicitly allowed by configured sources can be accessed - - Prevents unauthorized access to random websites - - Domain matching includes both exact matches and subdomain matches + list_sources: List of available sources with names, URLs, and allowed domains + fetch_index: Source info with parsed URLs from llms.txt + fetch_content: Documentation content, success status, and metadata + add_source: Success/error message for source addition Examples: - # When user asks "How do I configure Atlan's data lineage?" - result = await fetch_docs_tool("https://docs.atlan.com/setup/lineage") - if result["success"]: - # Use result["content"] to provide detailed answer about lineage setup - - # When user asks "What are Atlan's asset types?" - result = await fetch_docs_tool("https://docs.atlan.com/concepts/assets") - if result["success"]: - # Use result["content"] to explain asset types comprehensively - """ - # Parse source_names if provided - parsed_source_names = None - if source_names: - parsed_source_names = [name.strip() for name in source_names.split(",")] + # 1. Start by discovering available documentation sources + await documentation_tool(action="list_sources") + + # 2. Explore what topics are available in Atlan docs + await documentation_tool(action="fetch_index", source_name="Atlan Docs") - return await fetch_documentation(url, parsed_source_names) + # 3. Fetch specific content to answer user questions + await documentation_tool( + action="fetch_content", + url="https://docs.atlan.com/setup/lineage" + ) + # 4. Add new documentation source if needed + await documentation_tool( + action="add_source", + source_name="Partner Docs", + llms_txt_url="https://partner.example.com/llms.txt", + allowed_domains="partner.example.com" + ) -@mcp.tool() -def add_doc_source_tool( - name: str, llms_txt_url: str, allowed_domains: str = None -) -> Dict[str, str]: + Security Features: + - Domain validation prevents access to unauthorized websites + - Source management ensures only trusted documentation sources + - Comprehensive error handling for network and parsing issues """ - ➕ WHEN TO USE: Call this when users need access to additional product documentation - sources beyond the default Atlan docs (e.g., partner integrations, custom tools). - Add a new documentation source to the server configuration. + if action == "list_sources": + return {"sources": list_doc_sources(), "action": "list_sources"} - This tool allows adding custom llms.txt sources with their allowed domains - for documentation fetching. Use when users need documentation from sources - not currently configured in the server. - - Args: - name (str): Unique name/identifier for the documentation source. - llms_txt_url (str): URL to the llms.txt file for this source. - allowed_domains (str, optional): Comma-separated list of allowed domains. - If not provided, the domain is auto-extracted from llms_txt_url. + elif action == "fetch_index": + if not source_name: + return { + "error": "source_name is required for fetch_index action", + "action": "fetch_index", + } + result = await fetch_llms_txt_content(source_name) + result["action"] = "fetch_index" + return result + + elif action == "fetch_content": + if not url: + return { + "error": "url is required for fetch_content action", + "action": "fetch_content", + } - Returns: - Dict[str, str]: Success or error message: - - success: Success message if source was added - - error: Error message if addition failed + # Parse source_names if provided + parsed_source_names = None + if source_names: + parsed_source_names = [name.strip() for name in source_names.split(",")] - Security Note: - - Allowed domains control which URLs can be fetched with fetch_docs_tool - - Use '*' as a domain to allow all domains (not recommended for security) - - Domains support both exact matches and subdomain matching + result = await fetch_documentation(url, parsed_source_names) + result["action"] = "fetch_content" + return result - Examples: - # When user asks about Snowflake integration with Atlan - result = add_doc_source_tool( - name="Snowflake Docs", - llms_txt_url="https://docs.snowflake.com/llms.txt" - ) + elif action == "add_source": + if not source_name or not llms_txt_url: + return { + "error": "source_name and llms_txt_url are required for add_source action", + "action": "add_source", + } - # When user needs access to partner documentation - result = add_doc_source_tool( - name="Partner Integration Docs", - llms_txt_url="https://partner-docs.example.com/llms.txt", - allowed_domains="partner-docs.example.com,help.example.com" - ) + # Parse allowed_domains if provided + parsed_domains = None + if allowed_domains: + parsed_domains = [domain.strip() for domain in allowed_domains.split(",")] - # Check result - if "success" in result: - # Source added successfully, can now use with other tools - pass - else: - print(f"Error: {result['error']}") - """ - # Parse allowed_domains if provided - parsed_domains = None - if allowed_domains: - parsed_domains = [domain.strip() for domain in allowed_domains.split(",")] + result = add_doc_source(source_name, llms_txt_url, parsed_domains) + result["action"] = "add_source" + return result - return add_doc_source(name, llms_txt_url, parsed_domains) + else: + return { + "error": f"Invalid action '{action}'. Must be one of: list_sources, fetch_index, fetch_content, add_source", + "available_actions": [ + "list_sources", + "fetch_index", + "fetch_content", + "add_source", + ], + } def main(): From 92491918cc2bc8fe74bce0542ce8c76f1236a57f Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Mon, 15 Sep 2025 21:20:02 +0530 Subject: [PATCH 06/16] refactor: remove add_source functionality from documentation_tool - Remove add_source action to restrict tool to Atlan documentation only - Eliminate llms_txt_url and allowed_domains parameters - Update documentation to reflect Atlan-only focus - Simplify available actions to list_sources, fetch_index, fetch_content - Prevent customers from adding external documentation sources --- modelcontextprotocol/README.md | 4 +- modelcontextprotocol/server.py | 70 ++++++++-------------------------- 2 files changed, 17 insertions(+), 57 deletions(-) diff --git a/modelcontextprotocol/README.md b/modelcontextprotocol/README.md index c8722c8..234cdfa 100644 --- a/modelcontextprotocol/README.md +++ b/modelcontextprotocol/README.md @@ -153,7 +153,7 @@ Open `Cursor > Settings > Tools & Integrations > New MCP Server` to include the | Tool | Description | | ------------------- | ----------------------------------------------------------------- | -| `documentation` | Unified tool for all documentation operations with actions: `list_sources`, `fetch_index`, `fetch_content`, `add_source` | +| `documentation` | Unified tool for Atlan documentation operations with actions: `list_sources`, `fetch_index`, `fetch_content` | > **📖 Documentation Tool Usage**: This unified tool enables AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. It automatically handles domain security, content parsing, and provides a streamlined interface for all documentation operations. @@ -224,7 +224,7 @@ You can restrict any of the following tools: - `create_glossary_terms` - Term creation #### Documentation Tools -- `documentation_tool` - Unified documentation tool (all actions: list_sources, fetch_index, fetch_content, add_source) +- `documentation_tool` - Unified Atlan documentation tool (actions: list_sources, fetch_index, fetch_content) ### Common Use Cases diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index 6419259..e321637 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -14,7 +14,6 @@ list_doc_sources, fetch_llms_txt_content, fetch_documentation, - add_doc_source, UpdatableAttribute, CertificateStatus, UpdatableAsset, @@ -700,48 +699,38 @@ def create_glossary_categories(categories) -> List[Dict[str, Any]]: @mcp.tool() async def documentation_tool( - action: str, - source_name: str = None, - url: str = None, - llms_txt_url: str = None, - allowed_domains: str = None, - source_names: str = None, + action: str, source_name: str = None, url: str = None, source_names: str = None ) -> Dict[str, Any]: """ - 📚 UNIFIED DOCUMENTATION TOOL - Your one-stop solution for all Atlan documentation needs! + UNIFIED DOCUMENTATION TOOL - Your one-stop solution for all Atlan documentation needs! - 🔍 WHEN TO USE: Call this tool whenever users ask questions about Atlan products, features, + WHEN TO USE: Call this tool whenever users ask questions about Atlan products, features, APIs, integrations, or need any documentation-related assistance. - This powerful unified tool handles all documentation operations through different actions: - - list_sources: Discover available documentation sources - - fetch_index: Explore topics available in a documentation source - - fetch_content: Retrieve specific documentation content to answer questions - - add_source: Add new documentation sources for extended coverage + This powerful unified tool handles all Atlan documentation operations through different actions: + - list_sources: Discover available Atlan documentation sources + - fetch_index: Explore topics available in Atlan documentation + - fetch_content: Retrieve specific Atlan documentation content to answer questions Args: action (str): The operation to perform. Must be one of: - - "list_sources": List all available documentation sources - - "fetch_index": Fetch and parse llms.txt content from a source - - "fetch_content": Fetch documentation content from a specific URL - - "add_source": Add a new documentation source + - "list_sources": List all available Atlan documentation sources + - "fetch_index": Fetch and parse llms.txt content from an Atlan source + - "fetch_content": Fetch Atlan documentation content from a specific URL source_name (str, optional): Name of documentation source (for fetch_index) url (str, optional): Documentation URL to fetch content from (for fetch_content) - llms_txt_url (str, optional): URL to llms.txt file (for add_source) - allowed_domains (str, optional): Comma-separated domains (for add_source) source_names (str, optional): Comma-separated source names for domain checking (for fetch_content) Returns: Dict[str, Any]: Response varies by action: - list_sources: List of available sources with names, URLs, and allowed domains + list_sources: List of available Atlan sources with names, URLs, and allowed domains fetch_index: Source info with parsed URLs from llms.txt fetch_content: Documentation content, success status, and metadata - add_source: Success/error message for source addition Examples: - # 1. Start by discovering available documentation sources + # 1. Start by discovering available Atlan documentation sources await documentation_tool(action="list_sources") # 2. Explore what topics are available in Atlan docs @@ -753,17 +742,9 @@ async def documentation_tool( url="https://docs.atlan.com/setup/lineage" ) - # 4. Add new documentation source if needed - await documentation_tool( - action="add_source", - source_name="Partner Docs", - llms_txt_url="https://partner.example.com/llms.txt", - allowed_domains="partner.example.com" - ) - Security Features: - Domain validation prevents access to unauthorized websites - - Source management ensures only trusted documentation sources + - Source management ensures only trusted Atlan documentation sources - Comprehensive error handling for network and parsing issues """ @@ -796,31 +777,10 @@ async def documentation_tool( result["action"] = "fetch_content" return result - elif action == "add_source": - if not source_name or not llms_txt_url: - return { - "error": "source_name and llms_txt_url are required for add_source action", - "action": "add_source", - } - - # Parse allowed_domains if provided - parsed_domains = None - if allowed_domains: - parsed_domains = [domain.strip() for domain in allowed_domains.split(",")] - - result = add_doc_source(source_name, llms_txt_url, parsed_domains) - result["action"] = "add_source" - return result - else: return { - "error": f"Invalid action '{action}'. Must be one of: list_sources, fetch_index, fetch_content, add_source", - "available_actions": [ - "list_sources", - "fetch_index", - "fetch_content", - "add_source", - ], + "error": f"Invalid action '{action}'. Must be one of: list_sources, fetch_index, fetch_content", + "available_actions": ["list_sources", "fetch_index", "fetch_content"], } From b1b319a508e739f3316c23fb5933b6a8f3fdbf34 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Wed, 17 Sep 2025 14:46:20 +0530 Subject: [PATCH 07/16] refactor: remove add_doc_source functionality from docs.py module - Remove add_source() method from LLMSTxtManager class - Remove add_doc_source() function from docs.py - Update tools/__init__.py imports to exclude add_doc_source - Remove add_doc_source from __all__ exports - Ensure Atlan-only documentation access with no external source addition - Successfully tested with streamable HTTP transport --- modelcontextprotocol/tools/__init__.py | 4 +-- .../tools/{llms_txt.py => docs.py} | 34 ------------------- 2 files changed, 1 insertion(+), 37 deletions(-) rename modelcontextprotocol/tools/{llms_txt.py => docs.py} (86%) diff --git a/modelcontextprotocol/tools/__init__.py b/modelcontextprotocol/tools/__init__.py index 0c4bf0b..56ce2e4 100644 --- a/modelcontextprotocol/tools/__init__.py +++ b/modelcontextprotocol/tools/__init__.py @@ -7,11 +7,10 @@ create_glossary_assets, create_glossary_term_assets, ) -from .llms_txt import ( +from .docs import ( list_doc_sources, fetch_llms_txt_content, fetch_documentation, - add_doc_source, ) from .models import ( CertificateStatus, @@ -33,7 +32,6 @@ "list_doc_sources", "fetch_llms_txt_content", "fetch_documentation", - "add_doc_source", "CertificateStatus", "UpdatableAttribute", "UpdatableAsset", diff --git a/modelcontextprotocol/tools/llms_txt.py b/modelcontextprotocol/tools/docs.py similarity index 86% rename from modelcontextprotocol/tools/llms_txt.py rename to modelcontextprotocol/tools/docs.py index 28aaab5..8774362 100644 --- a/modelcontextprotocol/tools/llms_txt.py +++ b/modelcontextprotocol/tools/docs.py @@ -41,19 +41,6 @@ def _initialize_default_sources(self): for source in default_sources: self.sources[source.name] = source - def add_source( - self, name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None - ): - """Add a new documentation source.""" - if allowed_domains is None: - # Auto-extract domain from URL - parsed = urlparse(llms_txt_url) - allowed_domains = [parsed.netloc] if parsed.netloc else [] - - self.sources[name] = DocSource( - name=name, llms_txt_url=llms_txt_url, allowed_domains=allowed_domains - ) - def list_sources(self) -> List[Dict[str, Any]]: """List all available documentation sources.""" return [ @@ -229,24 +216,3 @@ async def fetch_documentation( Dict containing the fetched content or error information """ return await llms_txt_manager.fetch_docs(url, source_names) - - -def add_doc_source( - name: str, llms_txt_url: str, allowed_domains: Optional[List[str]] = None -) -> Dict[str, str]: - """ - Add a new documentation source. - - Args: - name: Name for the source - llms_txt_url: URL to the llms.txt file - allowed_domains: List of allowed domains (auto-detected if not provided) - - Returns: - Success/error message - """ - try: - llms_txt_manager.add_source(name, llms_txt_url, allowed_domains) - return {"success": f"Added documentation source '{name}'"} - except Exception as e: - return {"error": f"Failed to add source '{name}': {str(e)}"} From 49c75687aff17f866d9a365f7811ea81ae680c87 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Thu, 18 Sep 2025 14:59:37 +0530 Subject: [PATCH 08/16] refactor: simplify documentation tool to use versatile fetch_content action Remove complex llms.txt parsing, update FastMCP to 2.12.3, reduce timeouts for better MCP compatibility --- modelcontextprotocol/pyproject.toml | 2 +- modelcontextprotocol/server.py | 69 +++++++++++++----------- modelcontextprotocol/tools/__init__.py | 2 - modelcontextprotocol/tools/docs.py | 73 ++++++-------------------- modelcontextprotocol/uv.lock | 8 +-- 5 files changed, 60 insertions(+), 94 deletions(-) diff --git a/modelcontextprotocol/pyproject.toml b/modelcontextprotocol/pyproject.toml index 2f7c023..b5cf1b7 100644 --- a/modelcontextprotocol/pyproject.toml +++ b/modelcontextprotocol/pyproject.toml @@ -16,7 +16,7 @@ classifiers = [ ] dependencies = [ - "fastmcp==2.11.0", + "fastmcp==2.12.3", "pyatlan>=6.0.1", "httpx>=0.25.0", ] diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index e321637..1707380 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -12,7 +12,6 @@ create_glossary_assets, create_glossary_term_assets, list_doc_sources, - fetch_llms_txt_content, fetch_documentation, UpdatableAttribute, CertificateStatus, @@ -26,7 +25,7 @@ from middleware import ToolRestrictionMiddleware -mcp = FastMCP("Atlan MCP Server") +mcp = FastMCP("Atlan MCP Server", dependencies=["pyatlan", "fastmcp"]) # Get restricted tools from environment variable or use default restricted_tools_env = os.getenv("RESTRICTED_TOOLS", "") @@ -699,47 +698,67 @@ def create_glossary_categories(categories) -> List[Dict[str, Any]]: @mcp.tool() async def documentation_tool( - action: str, source_name: str = None, url: str = None, source_names: str = None + action: str, url: str = None, source_names: str = None ) -> Dict[str, Any]: """ UNIFIED DOCUMENTATION TOOL - Your one-stop solution for all Atlan documentation needs! WHEN TO USE: Call this tool whenever users ask questions about Atlan products, features, - APIs, integrations, or need any documentation-related assistance. + integrations, APIs, usage instructions, or any other Atlan-related topics. This powerful unified tool handles all Atlan documentation operations through different actions: - - list_sources: Discover available Atlan documentation sources - - fetch_index: Explore topics available in Atlan documentation - - fetch_content: Retrieve specific Atlan documentation content to answer questions + - list_sources: Discover available Atlan documentation sources with their llms.txt URLs + - fetch_content: Retrieve Atlan documentation content from any valid URL Args: action (str): The operation to perform. Must be one of: - - "list_sources": List all available Atlan documentation sources - - "fetch_index": Fetch and parse llms.txt content from an Atlan source - - "fetch_content": Fetch Atlan documentation content from a specific URL + - "list_sources": List all available Atlan documentation sources with llms.txt URLs + - "fetch_content": Fetch content from any Atlan documentation URL - source_name (str, optional): Name of documentation source (for fetch_index) url (str, optional): Documentation URL to fetch content from (for fetch_content) source_names (str, optional): Comma-separated source names for domain checking (for fetch_content) Returns: Dict[str, Any]: Response varies by action: - list_sources: List of available Atlan sources with names, URLs, and allowed domains - fetch_index: Source info with parsed URLs from llms.txt + list_sources: List of available Atlan sources with names, llms.txt URLs, allowed domains, and descriptions fetch_content: Documentation content, success status, and metadata + FETCH_CONTENT USE CASES: + The fetch_content action is versatile and supports multiple scenarios: + + 1. **Fetch llms.txt index**: Get all available documentation URLs + - Use the llms.txt URL from list_sources to see what topics are available + - This returns the raw llms.txt content with all documentation URLs + + 2. **Fetch specific documentation pages**: Read any documentation webpage + - Main documentation URLs listed in llms.txt + - Nested/linked pages within the documentation site + - Any docs.atlan.com URL for detailed content + Examples: - # 1. Start by discovering available Atlan documentation sources + # 1. Discover available Atlan documentation sources and their llms.txt URLs await documentation_tool(action="list_sources") - # 2. Explore what topics are available in Atlan docs - await documentation_tool(action="fetch_index", source_name="Atlan Docs") + # 2. Fetch llms.txt to see all available documentation topics + await documentation_tool( + action="fetch_content", + url="https://docs.atlan.com/llms.txt", + source_names="Atlan Docs" + ) + + # 3. Fetch specific documentation page to answer user questions + await documentation_tool( + action="fetch_content", + url="https://docs.atlan.com/integrations/snowflake", + source_names="Atlan Docs" + ) - # 3. Fetch specific content to answer user questions + # 4. Fetch any nested documentation page await documentation_tool( action="fetch_content", - url="https://docs.atlan.com/setup/lineage" + url="https://docs.atlan.com/setup-and-settings/admin/lineage-settings", + source_names="Atlan Docs" ) Security Features: @@ -751,16 +770,6 @@ async def documentation_tool( if action == "list_sources": return {"sources": list_doc_sources(), "action": "list_sources"} - elif action == "fetch_index": - if not source_name: - return { - "error": "source_name is required for fetch_index action", - "action": "fetch_index", - } - result = await fetch_llms_txt_content(source_name) - result["action"] = "fetch_index" - return result - elif action == "fetch_content": if not url: return { @@ -779,8 +788,8 @@ async def documentation_tool( else: return { - "error": f"Invalid action '{action}'. Must be one of: list_sources, fetch_index, fetch_content", - "available_actions": ["list_sources", "fetch_index", "fetch_content"], + "error": f"Invalid action '{action}'. Must be one of: list_sources, fetch_content", + "available_actions": ["list_sources", "fetch_content"], } diff --git a/modelcontextprotocol/tools/__init__.py b/modelcontextprotocol/tools/__init__.py index 56ce2e4..f71f582 100644 --- a/modelcontextprotocol/tools/__init__.py +++ b/modelcontextprotocol/tools/__init__.py @@ -9,7 +9,6 @@ ) from .docs import ( list_doc_sources, - fetch_llms_txt_content, fetch_documentation, ) from .models import ( @@ -30,7 +29,6 @@ "create_glossary_assets", "create_glossary_term_assets", "list_doc_sources", - "fetch_llms_txt_content", "fetch_documentation", "CertificateStatus", "UpdatableAttribute", diff --git a/modelcontextprotocol/tools/docs.py b/modelcontextprotocol/tools/docs.py index 8774362..5327ae4 100644 --- a/modelcontextprotocol/tools/docs.py +++ b/modelcontextprotocol/tools/docs.py @@ -1,6 +1,6 @@ """ -LLMS.txt documentation tools for MCP server. -Provides access to llms.txt files and documentation fetching capabilities. +Documentation tools for MCP server. +Provides access to Atlan documentation with domain validation for security. """ import re @@ -17,14 +17,17 @@ class DocSource: name: str llms_txt_url: str allowed_domains: List[str] + description: str -class LLMSTxtManager: - """Manages llms.txt documentation sources and fetching.""" +class DocumentationManager: + """Manages documentation sources and secure fetching.""" def __init__(self): self.sources: Dict[str, DocSource] = {} - self.timeout = 30.0 # Increased timeout for documentation fetching + self.timeout = ( + 15.0 # Timeout for documentation fetching (reduced to prevent MCP timeouts) + ) self.follow_redirects = True # Allow redirects for documentation URLs self._initialize_default_sources() @@ -35,6 +38,7 @@ def _initialize_default_sources(self): name="Atlan Docs", llms_txt_url="https://docs.atlan.com/llms.txt", allowed_domains=["docs.atlan.com"], + description="Official Atlan product documentation", ) ] @@ -48,6 +52,7 @@ def list_sources(self) -> List[Dict[str, Any]]: "name": source.name, "llms_txt_url": source.llms_txt_url, "allowed_domains": source.allowed_domains, + "description": source.description, } for source in self.sources.values() ] @@ -70,7 +75,7 @@ async def _fetch_content(self, url: str) -> str: """Fetch content from URL with proper error handling.""" try: async with httpx.AsyncClient( - timeout=httpx.Timeout(self.timeout, read=self.timeout), + timeout=httpx.Timeout(self.timeout, read=self.timeout, connect=5.0), follow_redirects=self.follow_redirects, ) as client: response = await client.get(url) @@ -85,47 +90,6 @@ async def _fetch_content(self, url: str) -> str: except Exception as e: raise Exception(f"Unexpected error fetching {url}: {e}") - async def fetch_llms_txt(self, source_name: str) -> Dict[str, Any]: - """Fetch and parse llms.txt content from a source.""" - if source_name not in self.sources: - raise Exception(f"Unknown source: {source_name}") - - source = self.sources[source_name] - - try: - content = await self._fetch_content(source.llms_txt_url) - - # Parse llms.txt content to extract URLs - lines = content.strip().split("\n") - urls = [] - - for line in lines: - line = line.strip() - if line and not line.startswith("#"): - # Handle different llms.txt formats - if line.startswith("http"): - urls.append(line) - elif ": " in line and "http" in line: - # Format: "Title: URL" - parts = line.split(": ", 1) - if len(parts) == 2 and parts[1].startswith("http"): - urls.append(parts[1]) - - return { - "source": source_name, - "llms_txt_url": source.llms_txt_url, - "content": content, - "parsed_urls": urls, - "allowed_domains": source.allowed_domains, - } - - except Exception as e: - return { - "source": source_name, - "error": str(e), - "llms_txt_url": source.llms_txt_url, - } - async def fetch_docs( self, url: str, source_names: Optional[List[str]] = None ) -> Dict[str, Any]: @@ -189,24 +153,19 @@ async def fetch_docs( # Global manager instance -llms_txt_manager = LLMSTxtManager() +documentation_manager = DocumentationManager() def list_doc_sources() -> List[Dict[str, Any]]: - """List all available llms.txt documentation sources.""" - return llms_txt_manager.list_sources() - - -async def fetch_llms_txt_content(source_name: str) -> Dict[str, Any]: - """Fetch and parse llms.txt content from a specific source.""" - return await llms_txt_manager.fetch_llms_txt(source_name) + """List all available documentation sources with their llms.txt URLs.""" + return documentation_manager.list_sources() async def fetch_documentation( url: str, source_names: Optional[List[str]] = None ) -> Dict[str, Any]: """ - Fetch documentation from a URL with domain security. + Fetch documentation from a URL with domain security validation. Args: url: The documentation URL to fetch @@ -215,4 +174,4 @@ async def fetch_documentation( Returns: Dict containing the fetched content or error information """ - return await llms_txt_manager.fetch_docs(url, source_names) + return await documentation_manager.fetch_docs(url, source_names) diff --git a/modelcontextprotocol/uv.lock b/modelcontextprotocol/uv.lock index 8817bae..3023377 100644 --- a/modelcontextprotocol/uv.lock +++ b/modelcontextprotocol/uv.lock @@ -41,7 +41,7 @@ dev = [ [package.metadata] requires-dist = [ - { name = "fastmcp", specifier = "==2.11.0" }, + { name = "fastmcp", specifier = "==2.12.3" }, { name = "httpx", specifier = ">=0.25.0" }, { name = "pyatlan", specifier = ">=6.0.1" }, ] @@ -321,7 +321,7 @@ wheels = [ [[package]] name = "fastmcp" -version = "2.11.0" +version = "2.12.3" source = { registry = "https://pypi.org/simple" } dependencies = [ { name = "authlib" }, @@ -336,9 +336,9 @@ dependencies = [ { name = "python-dotenv" }, { name = "rich" }, ] -sdist = { url = "https://files.pythonhosted.org/packages/c2/02/0701624e938fe4d1f13464de9bdc27be9aba2e4c4d41edab3ea496d31751/fastmcp-2.11.0.tar.gz", hash = "sha256:af0c52988607d8e9197df300e91880169e8fe24fd6ca177dca6a9eb6b245ce3c", size = 2663877 } +sdist = { url = "https://files.pythonhosted.org/packages/99/5e/035fdfa23646de8811776cd62d93440e334e8a4557b35c63c1bff125c08c/fastmcp-2.12.3.tar.gz", hash = "sha256:541dd569d5b6c083140b04d997ba3dc47f7c10695cee700d0a733ce63b20bb65", size = 5246812 } wheels = [ - { url = "https://files.pythonhosted.org/packages/0c/9a/51108b68e77650a7289b5f1ceff8dc0929ab48a26d1d2015f22121a9d183/fastmcp-2.11.0-py3-none-any.whl", hash = "sha256:8709a04522e66fda407b469fbe4d3290651aa7b06097b91c097e9a973c9b9bb3", size = 256193 }, + { url = "https://files.pythonhosted.org/packages/96/79/0fd386e61819e205563d4eb15da76564b80dc2edd3c64b46f2706235daec/fastmcp-2.12.3-py3-none-any.whl", hash = "sha256:aee50872923a9cba731861fc0120e7dbe4642a2685ba251b2b202b82fb6c25a9", size = 314031 }, ] [[package]] From bb96da57e51fb77f27d84fc973904ee263c2e8b1 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Fri, 19 Sep 2025 08:35:10 +0530 Subject: [PATCH 09/16] fix: downgrade fastmcp dependency to version 2.11.0 --- modelcontextprotocol/pyproject.toml | 2 +- modelcontextprotocol/uv.lock | 8 ++++---- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/modelcontextprotocol/pyproject.toml b/modelcontextprotocol/pyproject.toml index b5cf1b7..2f7c023 100644 --- a/modelcontextprotocol/pyproject.toml +++ b/modelcontextprotocol/pyproject.toml @@ -16,7 +16,7 @@ classifiers = [ ] dependencies = [ - "fastmcp==2.12.3", + "fastmcp==2.11.0", "pyatlan>=6.0.1", "httpx>=0.25.0", ] diff --git a/modelcontextprotocol/uv.lock b/modelcontextprotocol/uv.lock index 3023377..8817bae 100644 --- a/modelcontextprotocol/uv.lock +++ b/modelcontextprotocol/uv.lock @@ -41,7 +41,7 @@ dev = [ [package.metadata] requires-dist = [ - { name = "fastmcp", specifier = "==2.12.3" }, + { name = "fastmcp", specifier = "==2.11.0" }, { name = "httpx", specifier = ">=0.25.0" }, { name = "pyatlan", specifier = ">=6.0.1" }, ] @@ -321,7 +321,7 @@ wheels = [ [[package]] name = "fastmcp" -version = "2.12.3" +version = "2.11.0" source = { registry = "https://pypi.org/simple" } dependencies = [ { name = "authlib" }, @@ -336,9 +336,9 @@ dependencies = [ { name = "python-dotenv" }, { name = "rich" }, ] -sdist = { url = "https://files.pythonhosted.org/packages/99/5e/035fdfa23646de8811776cd62d93440e334e8a4557b35c63c1bff125c08c/fastmcp-2.12.3.tar.gz", hash = "sha256:541dd569d5b6c083140b04d997ba3dc47f7c10695cee700d0a733ce63b20bb65", size = 5246812 } +sdist = { url = "https://files.pythonhosted.org/packages/c2/02/0701624e938fe4d1f13464de9bdc27be9aba2e4c4d41edab3ea496d31751/fastmcp-2.11.0.tar.gz", hash = "sha256:af0c52988607d8e9197df300e91880169e8fe24fd6ca177dca6a9eb6b245ce3c", size = 2663877 } wheels = [ - { url = "https://files.pythonhosted.org/packages/96/79/0fd386e61819e205563d4eb15da76564b80dc2edd3c64b46f2706235daec/fastmcp-2.12.3-py3-none-any.whl", hash = "sha256:aee50872923a9cba731861fc0120e7dbe4642a2685ba251b2b202b82fb6c25a9", size = 314031 }, + { url = "https://files.pythonhosted.org/packages/0c/9a/51108b68e77650a7289b5f1ceff8dc0929ab48a26d1d2015f22121a9d183/fastmcp-2.11.0-py3-none-any.whl", hash = "sha256:8709a04522e66fda407b469fbe4d3290651aa7b06097b91c097e9a973c9b9bb3", size = 256193 }, ] [[package]] From 9b977117b8d5afff0105b55ae9b7d9551f27bc14 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Wed, 24 Sep 2025 22:50:17 +0530 Subject: [PATCH 10/16] docs: expose only list_sources for documentation tool Clients should fetch content directly via provided llms.txt URLs --- modelcontextprotocol/README.md | 6 +- modelcontextprotocol/server.py | 93 ++---------------- modelcontextprotocol/tools/__init__.py | 2 - modelcontextprotocol/tools/docs.py | 126 ++----------------------- 4 files changed, 19 insertions(+), 208 deletions(-) diff --git a/modelcontextprotocol/README.md b/modelcontextprotocol/README.md index 234cdfa..e8d759d 100644 --- a/modelcontextprotocol/README.md +++ b/modelcontextprotocol/README.md @@ -153,9 +153,9 @@ Open `Cursor > Settings > Tools & Integrations > New MCP Server` to include the | Tool | Description | | ------------------- | ----------------------------------------------------------------- | -| `documentation` | Unified tool for Atlan documentation operations with actions: `list_sources`, `fetch_index`, `fetch_content` | +| `documentation` | Provides Atlan documentation sources (llms.txt URLs) via `list_sources`. Clients should fetch content directly from these URLs. | -> **📖 Documentation Tool Usage**: This unified tool enables AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. It automatically handles domain security, content parsing, and provides a streamlined interface for all documentation operations. +> **📖 Documentation Tool Usage**: This tool exposes official Atlan documentation sources and their llms.txt URLs. MCP clients should fetch and read documentation content directly from those URLs. The server does not proxy or parse documentation. ## Tool Access Control @@ -224,7 +224,7 @@ You can restrict any of the following tools: - `create_glossary_terms` - Term creation #### Documentation Tools -- `documentation_tool` - Unified Atlan documentation tool (actions: list_sources, fetch_index, fetch_content) +- `documentation_tool` - Atlan documentation sources tool (actions: list_sources) ### Common Use Cases diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index 1707380..1444e8f 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -12,7 +12,6 @@ create_glossary_assets, create_glossary_term_assets, list_doc_sources, - fetch_documentation, UpdatableAttribute, CertificateStatus, UpdatableAsset, @@ -697,99 +696,25 @@ def create_glossary_categories(categories) -> List[Dict[str, Any]]: @mcp.tool() -async def documentation_tool( - action: str, url: str = None, source_names: str = None -) -> Dict[str, Any]: +async def documentation_tool(action: str = "list_sources") -> Dict[str, Any]: """ - UNIFIED DOCUMENTATION TOOL - Your one-stop solution for all Atlan documentation needs! + Unified tool for Atlan documentation operations. - WHEN TO USE: Call this tool whenever users ask questions about Atlan products, features, - integrations, APIs, usage instructions, or any other Atlan-related topics. + Actions: + - list_sources: Discover available Atlan documentation sources with their llms.txt URLs. - This powerful unified tool handles all Atlan documentation operations through different actions: - - list_sources: Discover available Atlan documentation sources with their llms.txt URLs - - fetch_content: Retrieve Atlan documentation content from any valid URL - - Args: - action (str): The operation to perform. Must be one of: - - "list_sources": List all available Atlan documentation sources with llms.txt URLs - - "fetch_content": Fetch content from any Atlan documentation URL - - url (str, optional): Documentation URL to fetch content from (for fetch_content) - source_names (str, optional): Comma-separated source names for domain checking (for fetch_content) - - Returns: - Dict[str, Any]: Response varies by action: - - list_sources: List of available Atlan sources with names, llms.txt URLs, allowed domains, and descriptions - fetch_content: Documentation content, success status, and metadata - - FETCH_CONTENT USE CASES: - The fetch_content action is versatile and supports multiple scenarios: - - 1. **Fetch llms.txt index**: Get all available documentation URLs - - Use the llms.txt URL from list_sources to see what topics are available - - This returns the raw llms.txt content with all documentation URLs - - 2. **Fetch specific documentation pages**: Read any documentation webpage - - Main documentation URLs listed in llms.txt - - Nested/linked pages within the documentation site - - Any docs.atlan.com URL for detailed content - - Examples: - # 1. Discover available Atlan documentation sources and their llms.txt URLs - await documentation_tool(action="list_sources") - - # 2. Fetch llms.txt to see all available documentation topics - await documentation_tool( - action="fetch_content", - url="https://docs.atlan.com/llms.txt", - source_names="Atlan Docs" - ) - - # 3. Fetch specific documentation page to answer user questions - await documentation_tool( - action="fetch_content", - url="https://docs.atlan.com/integrations/snowflake", - source_names="Atlan Docs" - ) - - # 4. Fetch any nested documentation page - await documentation_tool( - action="fetch_content", - url="https://docs.atlan.com/setup-and-settings/admin/lineage-settings", - source_names="Atlan Docs" - ) - - Security Features: - - Domain validation prevents access to unauthorized websites - - Source management ensures only trusted Atlan documentation sources - - Comprehensive error handling for network and parsing issues + Note: + - MCP clients should directly fetch documentation content using the provided URLs. + - This server does not proxy or fetch documentation content. """ if action == "list_sources": return {"sources": list_doc_sources(), "action": "list_sources"} - elif action == "fetch_content": - if not url: - return { - "error": "url is required for fetch_content action", - "action": "fetch_content", - } - - # Parse source_names if provided - parsed_source_names = None - if source_names: - parsed_source_names = [name.strip() for name in source_names.split(",")] - - result = await fetch_documentation(url, parsed_source_names) - result["action"] = "fetch_content" - return result - else: return { - "error": f"Invalid action '{action}'. Must be one of: list_sources, fetch_content", - "available_actions": ["list_sources", "fetch_content"], + "error": f"Invalid action '{action}'. Must be one of: list_sources", + "available_actions": ["list_sources"], } diff --git a/modelcontextprotocol/tools/__init__.py b/modelcontextprotocol/tools/__init__.py index f71f582..74a62fd 100644 --- a/modelcontextprotocol/tools/__init__.py +++ b/modelcontextprotocol/tools/__init__.py @@ -9,7 +9,6 @@ ) from .docs import ( list_doc_sources, - fetch_documentation, ) from .models import ( CertificateStatus, @@ -29,7 +28,6 @@ "create_glossary_assets", "create_glossary_term_assets", "list_doc_sources", - "fetch_documentation", "CertificateStatus", "UpdatableAttribute", "UpdatableAsset", diff --git a/modelcontextprotocol/tools/docs.py b/modelcontextprotocol/tools/docs.py index 5327ae4..51afe0b 100644 --- a/modelcontextprotocol/tools/docs.py +++ b/modelcontextprotocol/tools/docs.py @@ -1,12 +1,12 @@ """ Documentation tools for MCP server. -Provides access to Atlan documentation with domain validation for security. +Provides only source discovery (llms.txt URLs) for Atlan documentation. + +Note: MCP clients should fetch documentation content directly using the +provided URLs. This server intentionally does not proxy or fetch content. """ -import re -import httpx -from typing import Dict, List, Any, Optional -from urllib.parse import urlparse +from typing import Dict, List, Any from dataclasses import dataclass @@ -21,14 +21,10 @@ class DocSource: class DocumentationManager: - """Manages documentation sources and secure fetching.""" + """Manages documentation sources (discovery only).""" def __init__(self): self.sources: Dict[str, DocSource] = {} - self.timeout = ( - 15.0 # Timeout for documentation fetching (reduced to prevent MCP timeouts) - ) - self.follow_redirects = True # Allow redirects for documentation URLs self._initialize_default_sources() def _initialize_default_sources(self): @@ -57,99 +53,7 @@ def list_sources(self) -> List[Dict[str, Any]]: for source in self.sources.values() ] - def _is_domain_allowed(self, url: str, allowed_domains: List[str]) -> bool: - """Check if URL domain is in allowed domains list.""" - if "*" in allowed_domains: - return True - - parsed = urlparse(url) - domain = parsed.netloc.lower() - - for allowed in allowed_domains: - if domain == allowed.lower() or domain.endswith("." + allowed.lower()): - return True - - return False - - async def _fetch_content(self, url: str) -> str: - """Fetch content from URL with proper error handling.""" - try: - async with httpx.AsyncClient( - timeout=httpx.Timeout(self.timeout, read=self.timeout, connect=5.0), - follow_redirects=self.follow_redirects, - ) as client: - response = await client.get(url) - response.raise_for_status() - return response.text - except httpx.TimeoutException: - raise Exception(f"Timeout fetching {url} after {self.timeout}s") - except httpx.RequestError as e: - raise Exception(f"Request error fetching {url}: {e}") - except httpx.HTTPStatusError as e: - raise Exception(f"HTTP {e.response.status_code} error fetching {url}: {e}") - except Exception as e: - raise Exception(f"Unexpected error fetching {url}: {e}") - - async def fetch_docs( - self, url: str, source_names: Optional[List[str]] = None - ) -> Dict[str, Any]: - """ - Fetch documentation from a URL with domain security checks. - - Args: - url: The URL to fetch - source_names: Optional list of source names to check against their allowed domains. - If None, checks against all sources. - """ - # Determine which sources to check - sources_to_check = [] - if source_names: - for name in source_names: - if name in self.sources: - sources_to_check.append(self.sources[name]) - else: - sources_to_check = list(self.sources.values()) - - # Check if URL is allowed by any source - allowed = False - matching_sources = [] - - for source in sources_to_check: - if self._is_domain_allowed(url, source.allowed_domains): - allowed = True - matching_sources.append(source.name) - - if not allowed: - return { - "url": url, - "error": "Domain not allowed. URL must be from one of the allowed domains from configured sources.", - "available_sources": [s.name for s in sources_to_check], - "allowed_domains": [ - domain for s in sources_to_check for domain in s.allowed_domains - ], - } - - try: - content = await self._fetch_content(url) - - # Basic content parsing - remove excessive whitespace - cleaned_content = re.sub(r"\n\s*\n\s*\n", "\n\n", content) - - return { - "url": url, - "content": cleaned_content, - "content_length": len(content), - "matching_sources": matching_sources, - "success": True, - } - - except Exception as e: - return { - "url": url, - "error": str(e), - "matching_sources": matching_sources, - "success": False, - } + # No fetching or validation methods: clients should fetch content directly. # Global manager instance @@ -159,19 +63,3 @@ async def fetch_docs( def list_doc_sources() -> List[Dict[str, Any]]: """List all available documentation sources with their llms.txt URLs.""" return documentation_manager.list_sources() - - -async def fetch_documentation( - url: str, source_names: Optional[List[str]] = None -) -> Dict[str, Any]: - """ - Fetch documentation from a URL with domain security validation. - - Args: - url: The documentation URL to fetch - source_names: Optional list of source names to restrict domain checking - - Returns: - Dict containing the fetched content or error information - """ - return await documentation_manager.fetch_docs(url, source_names) From be27ca07da4136815feffd31c3921190fab6a737 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Thu, 25 Sep 2025 19:18:57 +0530 Subject: [PATCH 11/16] Revert "docs: expose only list_sources for documentation tool" This reverts commit 9b977117b8d5afff0105b55ae9b7d9551f27bc14. --- modelcontextprotocol/README.md | 6 +- modelcontextprotocol/server.py | 93 ++++++++++++++++-- modelcontextprotocol/tools/__init__.py | 2 + modelcontextprotocol/tools/docs.py | 126 +++++++++++++++++++++++-- 4 files changed, 208 insertions(+), 19 deletions(-) diff --git a/modelcontextprotocol/README.md b/modelcontextprotocol/README.md index e8d759d..234cdfa 100644 --- a/modelcontextprotocol/README.md +++ b/modelcontextprotocol/README.md @@ -153,9 +153,9 @@ Open `Cursor > Settings > Tools & Integrations > New MCP Server` to include the | Tool | Description | | ------------------- | ----------------------------------------------------------------- | -| `documentation` | Provides Atlan documentation sources (llms.txt URLs) via `list_sources`. Clients should fetch content directly from these URLs. | +| `documentation` | Unified tool for Atlan documentation operations with actions: `list_sources`, `fetch_index`, `fetch_content` | -> **📖 Documentation Tool Usage**: This tool exposes official Atlan documentation sources and their llms.txt URLs. MCP clients should fetch and read documentation content directly from those URLs. The server does not proxy or parse documentation. +> **📖 Documentation Tool Usage**: This unified tool enables AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. It automatically handles domain security, content parsing, and provides a streamlined interface for all documentation operations. ## Tool Access Control @@ -224,7 +224,7 @@ You can restrict any of the following tools: - `create_glossary_terms` - Term creation #### Documentation Tools -- `documentation_tool` - Atlan documentation sources tool (actions: list_sources) +- `documentation_tool` - Unified Atlan documentation tool (actions: list_sources, fetch_index, fetch_content) ### Common Use Cases diff --git a/modelcontextprotocol/server.py b/modelcontextprotocol/server.py index 1444e8f..1707380 100644 --- a/modelcontextprotocol/server.py +++ b/modelcontextprotocol/server.py @@ -12,6 +12,7 @@ create_glossary_assets, create_glossary_term_assets, list_doc_sources, + fetch_documentation, UpdatableAttribute, CertificateStatus, UpdatableAsset, @@ -696,25 +697,99 @@ def create_glossary_categories(categories) -> List[Dict[str, Any]]: @mcp.tool() -async def documentation_tool(action: str = "list_sources") -> Dict[str, Any]: +async def documentation_tool( + action: str, url: str = None, source_names: str = None +) -> Dict[str, Any]: """ - Unified tool for Atlan documentation operations. + UNIFIED DOCUMENTATION TOOL - Your one-stop solution for all Atlan documentation needs! - Actions: - - list_sources: Discover available Atlan documentation sources with their llms.txt URLs. + WHEN TO USE: Call this tool whenever users ask questions about Atlan products, features, + integrations, APIs, usage instructions, or any other Atlan-related topics. - Note: - - MCP clients should directly fetch documentation content using the provided URLs. - - This server does not proxy or fetch documentation content. + This powerful unified tool handles all Atlan documentation operations through different actions: + - list_sources: Discover available Atlan documentation sources with their llms.txt URLs + - fetch_content: Retrieve Atlan documentation content from any valid URL + + Args: + action (str): The operation to perform. Must be one of: + - "list_sources": List all available Atlan documentation sources with llms.txt URLs + - "fetch_content": Fetch content from any Atlan documentation URL + + url (str, optional): Documentation URL to fetch content from (for fetch_content) + source_names (str, optional): Comma-separated source names for domain checking (for fetch_content) + + Returns: + Dict[str, Any]: Response varies by action: + + list_sources: List of available Atlan sources with names, llms.txt URLs, allowed domains, and descriptions + fetch_content: Documentation content, success status, and metadata + + FETCH_CONTENT USE CASES: + The fetch_content action is versatile and supports multiple scenarios: + + 1. **Fetch llms.txt index**: Get all available documentation URLs + - Use the llms.txt URL from list_sources to see what topics are available + - This returns the raw llms.txt content with all documentation URLs + + 2. **Fetch specific documentation pages**: Read any documentation webpage + - Main documentation URLs listed in llms.txt + - Nested/linked pages within the documentation site + - Any docs.atlan.com URL for detailed content + + Examples: + # 1. Discover available Atlan documentation sources and their llms.txt URLs + await documentation_tool(action="list_sources") + + # 2. Fetch llms.txt to see all available documentation topics + await documentation_tool( + action="fetch_content", + url="https://docs.atlan.com/llms.txt", + source_names="Atlan Docs" + ) + + # 3. Fetch specific documentation page to answer user questions + await documentation_tool( + action="fetch_content", + url="https://docs.atlan.com/integrations/snowflake", + source_names="Atlan Docs" + ) + + # 4. Fetch any nested documentation page + await documentation_tool( + action="fetch_content", + url="https://docs.atlan.com/setup-and-settings/admin/lineage-settings", + source_names="Atlan Docs" + ) + + Security Features: + - Domain validation prevents access to unauthorized websites + - Source management ensures only trusted Atlan documentation sources + - Comprehensive error handling for network and parsing issues """ if action == "list_sources": return {"sources": list_doc_sources(), "action": "list_sources"} + elif action == "fetch_content": + if not url: + return { + "error": "url is required for fetch_content action", + "action": "fetch_content", + } + + # Parse source_names if provided + parsed_source_names = None + if source_names: + parsed_source_names = [name.strip() for name in source_names.split(",")] + + result = await fetch_documentation(url, parsed_source_names) + result["action"] = "fetch_content" + return result + else: return { - "error": f"Invalid action '{action}'. Must be one of: list_sources", - "available_actions": ["list_sources"], + "error": f"Invalid action '{action}'. Must be one of: list_sources, fetch_content", + "available_actions": ["list_sources", "fetch_content"], } diff --git a/modelcontextprotocol/tools/__init__.py b/modelcontextprotocol/tools/__init__.py index 74a62fd..f71f582 100644 --- a/modelcontextprotocol/tools/__init__.py +++ b/modelcontextprotocol/tools/__init__.py @@ -9,6 +9,7 @@ ) from .docs import ( list_doc_sources, + fetch_documentation, ) from .models import ( CertificateStatus, @@ -28,6 +29,7 @@ "create_glossary_assets", "create_glossary_term_assets", "list_doc_sources", + "fetch_documentation", "CertificateStatus", "UpdatableAttribute", "UpdatableAsset", diff --git a/modelcontextprotocol/tools/docs.py b/modelcontextprotocol/tools/docs.py index 51afe0b..5327ae4 100644 --- a/modelcontextprotocol/tools/docs.py +++ b/modelcontextprotocol/tools/docs.py @@ -1,12 +1,12 @@ """ Documentation tools for MCP server. -Provides only source discovery (llms.txt URLs) for Atlan documentation. - -Note: MCP clients should fetch documentation content directly using the -provided URLs. This server intentionally does not proxy or fetch content. +Provides access to Atlan documentation with domain validation for security. """ -from typing import Dict, List, Any +import re +import httpx +from typing import Dict, List, Any, Optional +from urllib.parse import urlparse from dataclasses import dataclass @@ -21,10 +21,14 @@ class DocSource: class DocumentationManager: - """Manages documentation sources (discovery only).""" + """Manages documentation sources and secure fetching.""" def __init__(self): self.sources: Dict[str, DocSource] = {} + self.timeout = ( + 15.0 # Timeout for documentation fetching (reduced to prevent MCP timeouts) + ) + self.follow_redirects = True # Allow redirects for documentation URLs self._initialize_default_sources() def _initialize_default_sources(self): @@ -53,7 +57,99 @@ def list_sources(self) -> List[Dict[str, Any]]: for source in self.sources.values() ] - # No fetching or validation methods: clients should fetch content directly. + def _is_domain_allowed(self, url: str, allowed_domains: List[str]) -> bool: + """Check if URL domain is in allowed domains list.""" + if "*" in allowed_domains: + return True + + parsed = urlparse(url) + domain = parsed.netloc.lower() + + for allowed in allowed_domains: + if domain == allowed.lower() or domain.endswith("." + allowed.lower()): + return True + + return False + + async def _fetch_content(self, url: str) -> str: + """Fetch content from URL with proper error handling.""" + try: + async with httpx.AsyncClient( + timeout=httpx.Timeout(self.timeout, read=self.timeout, connect=5.0), + follow_redirects=self.follow_redirects, + ) as client: + response = await client.get(url) + response.raise_for_status() + return response.text + except httpx.TimeoutException: + raise Exception(f"Timeout fetching {url} after {self.timeout}s") + except httpx.RequestError as e: + raise Exception(f"Request error fetching {url}: {e}") + except httpx.HTTPStatusError as e: + raise Exception(f"HTTP {e.response.status_code} error fetching {url}: {e}") + except Exception as e: + raise Exception(f"Unexpected error fetching {url}: {e}") + + async def fetch_docs( + self, url: str, source_names: Optional[List[str]] = None + ) -> Dict[str, Any]: + """ + Fetch documentation from a URL with domain security checks. + + Args: + url: The URL to fetch + source_names: Optional list of source names to check against their allowed domains. + If None, checks against all sources. + """ + # Determine which sources to check + sources_to_check = [] + if source_names: + for name in source_names: + if name in self.sources: + sources_to_check.append(self.sources[name]) + else: + sources_to_check = list(self.sources.values()) + + # Check if URL is allowed by any source + allowed = False + matching_sources = [] + + for source in sources_to_check: + if self._is_domain_allowed(url, source.allowed_domains): + allowed = True + matching_sources.append(source.name) + + if not allowed: + return { + "url": url, + "error": "Domain not allowed. URL must be from one of the allowed domains from configured sources.", + "available_sources": [s.name for s in sources_to_check], + "allowed_domains": [ + domain for s in sources_to_check for domain in s.allowed_domains + ], + } + + try: + content = await self._fetch_content(url) + + # Basic content parsing - remove excessive whitespace + cleaned_content = re.sub(r"\n\s*\n\s*\n", "\n\n", content) + + return { + "url": url, + "content": cleaned_content, + "content_length": len(content), + "matching_sources": matching_sources, + "success": True, + } + + except Exception as e: + return { + "url": url, + "error": str(e), + "matching_sources": matching_sources, + "success": False, + } # Global manager instance @@ -63,3 +159,19 @@ def list_sources(self) -> List[Dict[str, Any]]: def list_doc_sources() -> List[Dict[str, Any]]: """List all available documentation sources with their llms.txt URLs.""" return documentation_manager.list_sources() + + +async def fetch_documentation( + url: str, source_names: Optional[List[str]] = None +) -> Dict[str, Any]: + """ + Fetch documentation from a URL with domain security validation. + + Args: + url: The documentation URL to fetch + source_names: Optional list of source names to restrict domain checking + + Returns: + Dict containing the fetched content or error information + """ + return await documentation_manager.fetch_docs(url, source_names) From a532676a3cc93ab17280fe10a840b65b0c1eba87 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Thu, 25 Sep 2025 19:20:15 +0530 Subject: [PATCH 12/16] Revert "fix: downgrade fastmcp dependency to version 2.11.0" This reverts commit bb96da57e51fb77f27d84fc973904ee263c2e8b1. --- modelcontextprotocol/pyproject.toml | 2 +- modelcontextprotocol/uv.lock | 8 ++++---- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/modelcontextprotocol/pyproject.toml b/modelcontextprotocol/pyproject.toml index 2f7c023..b5cf1b7 100644 --- a/modelcontextprotocol/pyproject.toml +++ b/modelcontextprotocol/pyproject.toml @@ -16,7 +16,7 @@ classifiers = [ ] dependencies = [ - "fastmcp==2.11.0", + "fastmcp==2.12.3", "pyatlan>=6.0.1", "httpx>=0.25.0", ] diff --git a/modelcontextprotocol/uv.lock b/modelcontextprotocol/uv.lock index 8817bae..3023377 100644 --- a/modelcontextprotocol/uv.lock +++ b/modelcontextprotocol/uv.lock @@ -41,7 +41,7 @@ dev = [ [package.metadata] requires-dist = [ - { name = "fastmcp", specifier = "==2.11.0" }, + { name = "fastmcp", specifier = "==2.12.3" }, { name = "httpx", specifier = ">=0.25.0" }, { name = "pyatlan", specifier = ">=6.0.1" }, ] @@ -321,7 +321,7 @@ wheels = [ [[package]] name = "fastmcp" -version = "2.11.0" +version = "2.12.3" source = { registry = "https://pypi.org/simple" } dependencies = [ { name = "authlib" }, @@ -336,9 +336,9 @@ dependencies = [ { name = "python-dotenv" }, { name = "rich" }, ] -sdist = { url = "https://files.pythonhosted.org/packages/c2/02/0701624e938fe4d1f13464de9bdc27be9aba2e4c4d41edab3ea496d31751/fastmcp-2.11.0.tar.gz", hash = "sha256:af0c52988607d8e9197df300e91880169e8fe24fd6ca177dca6a9eb6b245ce3c", size = 2663877 } +sdist = { url = "https://files.pythonhosted.org/packages/99/5e/035fdfa23646de8811776cd62d93440e334e8a4557b35c63c1bff125c08c/fastmcp-2.12.3.tar.gz", hash = "sha256:541dd569d5b6c083140b04d997ba3dc47f7c10695cee700d0a733ce63b20bb65", size = 5246812 } wheels = [ - { url = "https://files.pythonhosted.org/packages/0c/9a/51108b68e77650a7289b5f1ceff8dc0929ab48a26d1d2015f22121a9d183/fastmcp-2.11.0-py3-none-any.whl", hash = "sha256:8709a04522e66fda407b469fbe4d3290651aa7b06097b91c097e9a973c9b9bb3", size = 256193 }, + { url = "https://files.pythonhosted.org/packages/96/79/0fd386e61819e205563d4eb15da76564b80dc2edd3c64b46f2706235daec/fastmcp-2.12.3-py3-none-any.whl", hash = "sha256:aee50872923a9cba731861fc0120e7dbe4642a2685ba251b2b202b82fb6c25a9", size = 314031 }, ] [[package]] From 7a331434d07aaada0f43b49dd50123c050060911 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Thu, 25 Sep 2025 19:24:22 +0530 Subject: [PATCH 13/16] build: pin fastmcp to 2.11.0 Align with supported version for Atlan MCP server --- modelcontextprotocol/pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modelcontextprotocol/pyproject.toml b/modelcontextprotocol/pyproject.toml index b5cf1b7..2f7c023 100644 --- a/modelcontextprotocol/pyproject.toml +++ b/modelcontextprotocol/pyproject.toml @@ -16,7 +16,7 @@ classifiers = [ ] dependencies = [ - "fastmcp==2.12.3", + "fastmcp==2.11.0", "pyatlan>=6.0.1", "httpx>=0.25.0", ] From 3a1ff19152408726c264fb6861eaf63918412c00 Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Thu, 25 Sep 2025 20:48:17 +0530 Subject: [PATCH 14/16] feat: optimize HTML-to-markdown conversion and remove beautifulsoup4 - Remove beautifulsoup4 dependency, use markdownify directly - Add comprehensive JavaScript and navigation cleanup - Achieve 88% token reduction while preserving content links - Improve security with better domain validation - Clean up unnecessary return fields for API response - Update README.md with correct documentation tool information --- modelcontextprotocol/README.md | 19 ++- modelcontextprotocol/pyproject.toml | 1 + modelcontextprotocol/tools/docs.py | 186 ++++++++++++++++++++++++++-- modelcontextprotocol/uv.lock | 45 ++++++- 4 files changed, 237 insertions(+), 14 deletions(-) diff --git a/modelcontextprotocol/README.md b/modelcontextprotocol/README.md index 234cdfa..ce4ebdf 100644 --- a/modelcontextprotocol/README.md +++ b/modelcontextprotocol/README.md @@ -153,9 +153,22 @@ Open `Cursor > Settings > Tools & Integrations > New MCP Server` to include the | Tool | Description | | ------------------- | ----------------------------------------------------------------- | -| `documentation` | Unified tool for Atlan documentation operations with actions: `list_sources`, `fetch_index`, `fetch_content` | +| `documentation_tool`| Unified tool for Atlan documentation operations with actions: `list_sources`, `fetch_content` | -> **📖 Documentation Tool Usage**: This unified tool enables AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. It automatically handles domain security, content parsing, and provides a streamlined interface for all documentation operations. +> **📖 Documentation Tool Usage**: This unified tool enables AI agents to access and retrieve Atlan product documentation to answer user questions about features, APIs, integrations, and usage instructions. It automatically handles domain security, content parsing with optimized HTML-to-markdown conversion, and provides a streamlined interface for all documentation operations. The tool achieves up to 88% token reduction while preserving all important content and links. + +#### Documentation Tool Actions + +| Action | Description | Parameters | Use Cases | +|--------|-------------|------------|-----------| +| `list_sources` | Lists all available Atlan documentation sources with their llms.txt URLs and allowed domains | None | Discover what documentation sources are available | +| `fetch_content` | Fetches content from any valid Atlan documentation URL | `url` (required), `source_names` (optional) | Get llms.txt index, retrieve specific documentation pages, access nested documentation content | + +#### Common Documentation Workflows + +1. **Discovery**: Use `list_sources` to see available documentation sources +2. **Index Retrieval**: Use `fetch_content` with an llms.txt URL to see all available topics +3. **Content Fetching**: Use `fetch_content` with specific documentation URLs to get detailed content ## Tool Access Control @@ -224,7 +237,7 @@ You can restrict any of the following tools: - `create_glossary_terms` - Term creation #### Documentation Tools -- `documentation_tool` - Unified Atlan documentation tool (actions: list_sources, fetch_index, fetch_content) +- `documentation_tool` - Unified Atlan documentation tool (actions: list_sources, fetch_content) ### Common Use Cases diff --git a/modelcontextprotocol/pyproject.toml b/modelcontextprotocol/pyproject.toml index 2f7c023..77719c3 100644 --- a/modelcontextprotocol/pyproject.toml +++ b/modelcontextprotocol/pyproject.toml @@ -19,6 +19,7 @@ dependencies = [ "fastmcp==2.11.0", "pyatlan>=6.0.1", "httpx>=0.25.0", + "markdownify>=0.11.6", ] [project.scripts] diff --git a/modelcontextprotocol/tools/docs.py b/modelcontextprotocol/tools/docs.py index 5327ae4..0746bfb 100644 --- a/modelcontextprotocol/tools/docs.py +++ b/modelcontextprotocol/tools/docs.py @@ -1,6 +1,7 @@ """ Documentation tools for MCP server. Provides access to Atlan documentation with domain validation for security. +Includes HTML to Markdown conversion to preserve links and reduce tokens. """ import re @@ -8,6 +9,7 @@ from typing import Dict, List, Any, Optional from urllib.parse import urlparse from dataclasses import dataclass +from markdownify import markdownify as md @dataclass @@ -71,8 +73,8 @@ def _is_domain_allowed(self, url: str, allowed_domains: List[str]) -> bool: return False - async def _fetch_content(self, url: str) -> str: - """Fetch content from URL with proper error handling.""" + async def _fetch_content(self, url: str) -> Dict[str, Any]: + """Fetch content and content-type from URL with proper error handling.""" try: async with httpx.AsyncClient( timeout=httpx.Timeout(self.timeout, read=self.timeout, connect=5.0), @@ -80,7 +82,10 @@ async def _fetch_content(self, url: str) -> str: ) as client: response = await client.get(url) response.raise_for_status() - return response.text + return { + "text": response.text, + "content_type": response.headers.get("content-type", ""), + } except httpx.TimeoutException: raise Exception(f"Timeout fetching {url} after {self.timeout}s") except httpx.RequestError as e: @@ -90,6 +95,162 @@ async def _fetch_content(self, url: str) -> str: except Exception as e: raise Exception(f"Unexpected error fetching {url}: {e}") + def _html_to_markdown(self, html: str) -> Dict[str, Optional[str]]: + """Convert HTML to markdown, preserving links and reducing tokens. + + Returns a dict containing: + - text: cleaned markdown content with links preserved + - title: page title if found + """ + # Extract title using simple regex + title = None + h1_match = re.search(r"]*>([^<]+)", html, re.IGNORECASE) + if h1_match: + title = h1_match.group(1).strip() + else: + title_match = re.search(r"]*>([^<]+)", html, re.IGNORECASE) + if title_match: + title = title_match.group(1).strip() + # Clean up title (remove " | Atlan Documentation" suffix) + title = re.sub(r"\s*\|\s*Atlan Documentation.*$", "", title) + + # Pre-process HTML to remove JavaScript and other unwanted content + # Remove script tags and their content + html = re.sub( + r"]*>.*?", "", html, flags=re.DOTALL | re.IGNORECASE + ) + + # Remove inline JavaScript patterns + html = re.sub(r"window\.dataLayer.*?(?=\n|$)", "", html, flags=re.MULTILINE) + html = re.sub(r"!function\([^)]*\).*?}\)\([^)]*\);?", "", html, flags=re.DOTALL) + html = re.sub( + r"window\.[a-zA-Z_$][a-zA-Z0-9_$]*\s*=.*?(?=\n|$)", + "", + html, + flags=re.MULTILINE, + ) + html = re.sub(r"\(function\(\).*?}\)\(\);?", "", html, flags=re.DOTALL) + + # Remove JSON-LD structured data + html = re.sub( + r'\{"@context".*?"https://schema\.org".*?\}', "", html, flags=re.DOTALL + ) + + # Convert HTML to markdown using markdownify with comprehensive stripping + markdown_text = md( + html, + heading_style="ATX", # Use # for headings + bullets="-", # Use - for bullets + strip=[ + # Core unwanted elements + "script", + "style", + "noscript", + "meta", + "link", + "title", + # Navigation and UI elements + "nav", + "header", + "footer", + "aside", + "menu", + # Forms and interactive elements + "form", + "button", + "input", + "select", + "textarea", + # Media and embedded content that doesn't convert well + "iframe", + "svg", + "canvas", + "audio", + "video", + # SEO and tracking elements + "base", + "area", + "map", + "embed", + "object", + "param", + ], + ) + + # Post-processing cleanup + # Remove title duplication from content (keep only the H1, remove title text) + markdown_text = re.sub( + r"^[^#\n]*\|\s*Atlan Documentation\s*\n+", "", markdown_text + ) + + # Remove empty links and malformed links + markdown_text = re.sub(r"\[\s*\]\([^)]*\)", "", markdown_text) + markdown_text = re.sub( + r"\[!\[.*?\]\([^)]*\)\]\([^)]*\)", "", markdown_text + ) # Remove logo links + + # Remove navigation artifacts + markdown_text = re.sub( + r"^[-•]\s*(Connect data|Data Warehouses|Amazon Redshift)\s*$", + "", + markdown_text, + flags=re.MULTILINE, + ) + markdown_text = re.sub(r"On this page\s*\n", "", markdown_text) + markdown_text = re.sub( + r"Copyright © \d{4} Atlan Pte\. Ltd\.", "", markdown_text + ) + + # Remove skip links and search + markdown_text = re.sub(r"\[Skip to main content\]\([^)]*\)", "", markdown_text) + markdown_text = re.sub(r"Search\s*\n", "", markdown_text) + + # Remove navigation menus + markdown_text = re.sub( + r"\[What's new\].*?\[Contact support\].*?\n", + "", + markdown_text, + flags=re.DOTALL, + ) + markdown_text = re.sub( + r"\[Get started\]\([^)]*\)\s*\n\s*\[Connect data\]\([^)]*\).*?\[Build with Atlan\]\([^)]*\)", + "", + markdown_text, + flags=re.DOTALL, + ) + + # Remove sidebar navigation + markdown_text = re.sub( + r"- \[Amazon Redshift\]\([^)]*\)\s*\n\s*- \[Get Started\].*?- \[Troubleshooting\].*?\n", + "", + markdown_text, + flags=re.DOTALL, + ) + + # Remove "Next" navigation and table of contents + markdown_text = re.sub( + r"\[Next\s*\n\s*[^\]]+\]\([^)]*\)", "", markdown_text, flags=re.DOTALL + ) + markdown_text = re.sub( + r"\n- \[.*?\]\(#.*?\)\s*$", "", markdown_text, flags=re.MULTILINE + ) + + # Clean up whitespace and formatting + markdown_text = re.sub( + r"\n\s*\n\s*\n+", "\n\n", markdown_text + ) # Multiple newlines to double + markdown_text = re.sub( + r"[ \t]+", " ", markdown_text + ) # Multiple spaces to single + markdown_text = re.sub( + r"\n\s+\n", "\n\n", markdown_text + ) # Lines with only whitespace + + # Remove any remaining empty lines at start/end + markdown_text = markdown_text.strip() + + return {"text": markdown_text, "title": title} + async def fetch_docs( self, url: str, source_names: Optional[List[str]] = None ) -> Dict[str, Any]: @@ -130,15 +291,26 @@ async def fetch_docs( } try: - content = await self._fetch_content(url) + fetched = await self._fetch_content(url) + content = fetched.get("text", "") + content_type = fetched.get("content_type", "") + + is_html = "text/html" in content_type.lower() or " Date: Thu, 25 Sep 2025 20:59:08 +0530 Subject: [PATCH 15/16] fix: improve script tag regex to address CodeQL security warning --- modelcontextprotocol/tools/docs.py | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/modelcontextprotocol/tools/docs.py b/modelcontextprotocol/tools/docs.py index 0746bfb..d0741b4 100644 --- a/modelcontextprotocol/tools/docs.py +++ b/modelcontextprotocol/tools/docs.py @@ -115,9 +115,13 @@ def _html_to_markdown(self, html: str) -> Dict[str, Optional[str]]: title = re.sub(r"\s*\|\s*Atlan Documentation.*$", "", title) # Pre-process HTML to remove JavaScript and other unwanted content - # Remove script tags and their content + # Remove script tags with proper case-insensitive matching for both opening and closing tags + # This pattern is more secure and handles nested content properly html = re.sub( - r"]*>.*?", "", html, flags=re.DOTALL | re.IGNORECASE + r")<[^<]*)*<\/script>", + "", + html, + flags=re.IGNORECASE, ) # Remove inline JavaScript patterns From f275d6b49b55e04ba0f0b44c421f192af8603a8e Mon Sep 17 00:00:00 2001 From: aravindsriraj Date: Sun, 28 Sep 2025 19:34:44 +0530 Subject: [PATCH 16/16] fix: propagate asyncio cancellations and make docs fetch timeout configurable --- modelcontextprotocol/middleware.py | 7 +++++++ modelcontextprotocol/tools/docs.py | 18 ++++++++++++++---- 2 files changed, 21 insertions(+), 4 deletions(-) diff --git a/modelcontextprotocol/middleware.py b/modelcontextprotocol/middleware.py index c90db62..ba6784b 100644 --- a/modelcontextprotocol/middleware.py +++ b/modelcontextprotocol/middleware.py @@ -6,6 +6,7 @@ """ from typing import List, Set, Optional +import asyncio from fastmcp.server.middleware import Middleware, MiddlewareContext from fastmcp.exceptions import ToolError import logging @@ -103,6 +104,9 @@ async def on_call_tool(self, context: MiddlewareContext, call_next): return await call_next(context) + except asyncio.CancelledError: + # Propagate cancellations so FastMCP can handle them properly + raise except ToolError: # Re-raise ToolError as-is raise @@ -151,6 +155,9 @@ async def on_list_tools(self, context: MiddlewareContext, call_next): return filtered_tools + except asyncio.CancelledError: + # Propagate cancellations during list operations as well + raise except Exception as e: logger.error( f"Error filtering tool list: {str(e)}", diff --git a/modelcontextprotocol/tools/docs.py b/modelcontextprotocol/tools/docs.py index d0741b4..e8332f0 100644 --- a/modelcontextprotocol/tools/docs.py +++ b/modelcontextprotocol/tools/docs.py @@ -4,7 +4,9 @@ Includes HTML to Markdown conversion to preserve links and reduce tokens. """ +import os import re +import asyncio import httpx from typing import Dict, List, Any, Optional from urllib.parse import urlparse @@ -27,9 +29,12 @@ class DocumentationManager: def __init__(self): self.sources: Dict[str, DocSource] = {} - self.timeout = ( - 15.0 # Timeout for documentation fetching (reduced to prevent MCP timeouts) - ) + # Timeout for documentation fetching in seconds. Keep this below typical MCP client timeouts. + # Configurable via DOCS_FETCH_TIMEOUT env var. Defaults to 8.0s. + try: + self.timeout = float(os.getenv("DOCS_FETCH_TIMEOUT", "8.0")) + except ValueError: + self.timeout = 8.0 self.follow_redirects = True # Allow redirects for documentation URLs self._initialize_default_sources() @@ -86,6 +91,9 @@ async def _fetch_content(self, url: str) -> Dict[str, Any]: "text": response.text, "content_type": response.headers.get("content-type", ""), } + except asyncio.CancelledError: + # Propagate cancellations so FastMCP can handle request cancellation properly + raise except httpx.TimeoutException: raise Exception(f"Timeout fetching {url} after {self.timeout}s") except httpx.RequestError as e: @@ -318,7 +326,9 @@ async def fetch_docs( "matching_sources": matching_sources, "success": True, } - + except asyncio.CancelledError: + # Ensure cancellations are not swallowed and are handled by FastMCP + raise except Exception as e: return { "url": url,