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Installation issue on windows & closed issue from June 2022 #64

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MonicaPala opened this issue Feb 17, 2023 · 1 comment
Open

Installation issue on windows & closed issue from June 2022 #64

MonicaPala opened this issue Feb 17, 2023 · 1 comment

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@MonicaPala
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Hi,

I am trying to install EBImage on Windows 10 machine, R 4.2.2 following the Readme from GitHub:

install.packages("BiocManager")
BiocManager::install("EBImage")

And i get a lot of warnings: Warning: unable to access index for repository https://bioconductor.org/packages/3.16/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.16/bioc/src/contrib/PACKAGES'

... and finishes with:
Warning message: packages ‘BiocVersion’, ‘EBImage’ are not available for Bioconductor version '3.16'

I read the closed issue from June 2022 but i cannot say that i really understood how it was solved.

I tried: devtools::install_github('aoles/EBImage', dependencies=TRUE, force=TRUE)
with error: Downloading GitHub repo aoles/EBImage@HEAD Error in utils::download.file(url, path, method = method, quiet = quiet, : cannot open URL 'https://api.github.com/repos/aoles/EBImage/tarball/HEAD'

And the variant: devtools::install_github('aoles/EBImage', dependencies=TRUE, force=TRUE, host="https://github.com")
with the error: Error: Failed to install 'unknown package' from GitHub: JSON: EXPECTED value GOT N

Any help would be very much appreciated,
Monica

@aoles
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aoles commented Apr 4, 2023

Hi Monica,

let me apologize for my late reply. Is this still valid or did you manage to solve the problem? If the latter is the case, please feel free to write a short note on how you have addressed it and close the issue. Thanks for your help!

Cheers,
Andrzej

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