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magpie-check-inputs
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magpie-check-inputs
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#!/bin/bash
#############################################################################
# Copyright (C) 2013-2015 Lawrence Livermore National Security, LLC.
# Produced at Lawrence Livermore National Laboratory (cf, DISCLAIMER).
# Written by Albert Chu <[email protected]>
# LLNL-CODE-644248
#
# This file is part of Magpie, scripts for running Hadoop on
# traditional HPC systems. For details, see https://github.com/llnl/magpie.
#
# Magpie is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# Magpie is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with Magpie. If not, see <http://www.gnu.org/licenses/>.
#############################################################################
# This script is checks environment variable setup. For the most part,
# it shouldn't be editted. See job submission files for configuration
# details.
__Magpie_check_is_enabled () {
local projectnametocheck=$1
shift
local projectnameneededfor=$2
shift
local extramsg=$@
local uppercaseprojectnametocheck=`echo ${projectnametocheck} | tr '[:lower:]' '[:upper:]'`
local varnametocheck="${uppercaseprojectnametocheck}_SETUP"
if [ "${!varnametocheck}" != "yes" ]
then
echo "${projectnameneededfor} requires ${projectnametocheck} to be setup, set ${varnametocheck} to yes"
if [ "${extramsg}X" != "X" ]
then
echo "${extramsg}"
fi
exit 1
fi
}
__Magpie_check_if_set_is_yes_or_no () {
local varname="$1"
if [ "${!varname}X" != "X" ] \
&& ( [ "${!varname}" != "yes" ] && [ "${!varname}" != "no" ] )
then
echo "${varname} must be set to yes or no"
exit 1
fi
}
__Magpie_check_if_set_is_true_or_false () {
local varname="$1"
if [ "${!varname}X" != "X" ] \
&& ( [ "${!varname}" != "true" ] && [ "${!varname}" != "false" ] )
then
echo "${varname} must be set to true or false"
exit 1
fi
}
__Magpie_check_environment_variable_must_be_set () {
local varname="$1"
if [ "${!varname}X" == "X" ]
then
echo "${varname} environment variable must be set"
exit 1
fi
}
__Magpie_check_must_be_set () {
local varname="$1"
local extramsg="$2"
if [ "${!varname}X" == "X" ]
then
echo "${varname} must be set ${extramsg}"
exit 1
fi
}
__Magpie_check_if_set_is_a_directory () {
local varname="$1"
if [ "${!varname}X" != "X" ] && [ ! -d ${!varname} ]
then
echo "${varname} does not point to a directory"
exit 1
fi
}
__Magpie_check_if_set_is_regular_file () {
local varname="$1"
if [ "${!varname}X" != "X" ] && [ ! -f ${!varname} ]
then
echo "${varname} does not point to a regular file"
exit 1
fi
}
__Magpie_check_path_is_regular_file () {
local pathfile="$1"
if [ ! -x ${pathfile} ]
then
echo "${pathfile} does not point to a regular file"
exit 1
fi
}
__Magpie_check_path_is_executable () {
local pathexec="$1"
if [ ! -x ${pathexec} ]
then
echo "Path ${patchexec} does not have execute permissions"
exit 1
fi
}
__Magpie_check_paths_are_executable () {
local scriptsvar=$1
if echo ${!scriptsvar} | grep -q -e ","
then
IFSORIG=${IFS}
IFS=","
for scriptargs in ${!scriptsvar}
do
# can't use IFS here
scriptarg0=`echo "$scriptargs" | awk '{print $1;}'`
__Magpie_check_path_is_executable ${scriptarg0}
done
IFS=${IFSORIG}
else
scriptargsarray=(${!scriptsvar})
__Magpie_check_path_is_executable ${scriptargsarray[0]}
fi
}
__Magpie_check_must_be_set_and_is_directory () {
local varname="$1"
local extramsg="$2"
__Magpie_check_must_be_set "${varname}" "${extramsg}"
__Magpie_check_if_set_is_a_directory "${varname}"
}
__Magpie_check_must_be_set_and_is_regular_file () {
local varname="$1"
local extramsg="$2"
__Magpie_check_must_be_set "${varname}" "${extramsg}"
__Magpie_check_if_set_is_regular_file "${varname}"
}
__Magpie_check_if_version_format_correct () {
local varname=$1
if ! echo ${!varname} | grep -q -E "[0-9]+\.[0-9]+\.[0-9]+"
then
echo "${varname} not formatted correctly, needs a X.Y.Z version number"
exit 1
fi
}
__Magpie_check_deprecated_configs () {
local varname=$1
if [ "${!varname}X" != "X" ]
then
echo "Variable ${varname} is no longer supported, please adjust for newer Magpie version"
exit 1
fi
}
#
# Flag deprecated settings for user
#
oldmodes="HADOOP_MODE PIG_MODE MAHOUT_MODE HBASE_MODE PHOENIX_MODE SPARK_MODE KAFKA_MODE ZEPPELIN_MODE STORM_MODE ZOOKEEPER_MODE"
oldprojects="HADOOP_UDA_SETUP TACHYON_SETUP"
oldfeatures="HDFS_FEDERATION_NAMENODE_COUNT HADOOP_PER_JOB_HDFS_PATH ZOOKEEPER_PER_JOB_DATA_DIR HADOOP_RAWNETWORKFS_BLOCKSIZE"
oldvars="SPARK_USE_YARN MAGPIE_SCRIPT_PATH MAGPIE_SCRIPT_ARGS"
for var in ${oldmodes} ${oldprojects} ${oldfeatures} ${oldvars}
do
__Magpie_check_deprecated_configs ${var}
done
#
# Check Core Inputs
#
__Magpie_check_must_be_set "MAGPIE_SUBMISSION_TYPE"
if [ "${MAGPIE_SUBMISSION_TYPE}" != "sbatchsrun" ] \
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "msubslurmsrun" ]\
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "msubtorquepdsh" ]\
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "sbatchmpirun" ] \
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "lsfmpirun" ]
then
echo "MAGPIE_SUBMISSION_TYPE environment variable must be set to sbatchsrun, msubslurmsrun, msubtorquepdsh, sbatchmpirun, lsfmpirun"
exit 1
fi
if [ "${MAGPIE_SUBMISSION_TYPE}" == "sbatchsrun" ] \
|| [ "${MAGPIE_SUBMISSION_TYPE}" == "sbatchmpirun" ] \
|| [ "${MAGPIE_SUBMISSION_TYPE}" == "msubslurmsrun" ]
then
__Magpie_check_environment_variable_must_be_set "SLURM_NODEID"
__Magpie_check_environment_variable_must_be_set "SLURM_NNODES"
__Magpie_check_environment_variable_must_be_set "SLURM_JOB_NODELIST"
__Magpie_check_environment_variable_must_be_set "SLURM_JOB_NAME"
__Magpie_check_environment_variable_must_be_set "SLURM_JOB_ID"
fi
#
# Check Magpie Inputs
#
__Magpie_check_must_be_set_and_is_directory "MAGPIE_SCRIPTS_HOME"
source ${MAGPIE_SCRIPTS_HOME}/magpie/exports/magpie-exports-submission-type
source ${MAGPIE_SCRIPTS_HOME}/magpie/lib/magpie-lib-hadoop-helper
source ${MAGPIE_SCRIPTS_HOME}/magpie/lib/magpie-lib-calculate-values
source ${MAGPIE_SCRIPTS_HOME}/magpie/lib/magpie-lib-helper
source ${MAGPIE_SCRIPTS_HOME}/magpie/lib/magpie-lib-version-helper
if [ "${MAGPIE_TIMELIMIT_MINUTES}X" == "X" ]
then
echo "MAGPIE_TIMELIMIT_MINUTES environment variable could not be calculated"
exit 1
fi
__Magpie_check_must_be_set "MAGPIE_LOCAL_DIR"
__Magpie_check_if_set_is_yes_or_no "MAGPIE_NO_LOCAL_DIR"
__Magpie_check_if_set_is_yes_or_no "MAGPIE_ONE_TIME_RUN"
__Magpie_check_must_be_set "MAGPIE_JOB_TYPE"
if [ "${MAGPIE_JOB_TYPE}" != "hadoop" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "hbase" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "phoenix" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "pig" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "mahout" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "spark" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "kafka" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "zeppelin" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "storm" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "hive" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "zookeeper" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "tensorflow" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "tensorflow-horovod" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "ray" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "testall" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "script" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "interactive" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "setuponly" ]
then
echo "MAGPIE_JOB_TYPE must be set to hadoop, hbase, pig, mahout, phoenix, spark, \
kafka, zeppelin, storm, hive, zookeeper, tensorflow, tensorflow-horovod, ray, \
testall, script, interactive, or setuponly"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "script" ]
then
__Magpie_check_must_be_set "MAGPIE_JOB_SCRIPT" "for MAGPIE_JOB_TYPE = ${MAGPIE_JOB_TYPE}"
# if user has multiple args, check if executable is ok
jobargs=($MAGPIE_JOB_SCRIPT)
__Magpie_check_path_is_executable ${jobargs[0]}
fi
magpiestartupshutdowntime=`expr ${magpie_startup_time_value} + ${magpie_shutdown_time_value}`
if [ ${MAGPIE_TIMELIMIT_MINUTES} -le ${magpiestartupshutdowntime} ]
then
echo "timelimit must be atleast the sum of MAGPIE_STARTUP_TIME & MAGPIE_SHUTDOWN_TIME"
exit 1
fi
if [ "${MAGPIE_PRE_JOB_RUN}X" != "X" ]
then
__Magpie_check_paths_are_executable "MAGPIE_PRE_JOB_RUN"
if [ ${magpie_startup_time_value} -lt 5 ]
then
echo "MAGPIE_STARTUP_TIME must be >= 5 minutes if MAGPIE_PRE_JOB_RUN is set"
exit 1
fi
fi
if [ "${MAGPIE_POST_JOB_RUN}X" != "X" ]
then
__Magpie_check_paths_are_executable "MAGPIE_POST_JOB_RUN"
if [ ${magpie_shutdown_time_value} -lt 10 ]
then
echo "MAGPIE_SHUTDOWN_TIME must be >= 10 minutes if MAGPIE_POST_JOB_RUN is set"
exit 1
fi
fi
if [ "${MAGPIE_PRE_EXECUTION_RUN}X" != "X" ]
then
__Magpie_check_paths_are_executable "MAGPIE_PRE_EXECUTION_RUN"
if [ ${magpie_startup_time_value} -lt 5 ]
then
echo "MAGPIE_STARTUP_TIME must be >= 5 minutes if MAGPIE_PRE_EXECUTION_RUN is set"
exit 1
fi
fi
if [ "${MAGPIE_POST_EXECUTION_RUN}X" != "X" ]
then
__Magpie_check_paths_are_executable "MAGPIE_POST_EXECUTION_RUN"
if [ ${magpie_shutdown_time_value} -lt 10 ]
then
echo "MAGPIE_SHUTDOWN_TIME must be >= 10 minutes if MAGPIE_POST_EXECUTION_RUN is set"
exit 1
fi
fi
if [ "${MAGPIE_HOSTNAME_CMD_MAP}X" != "X" ]
then
__Magpie_check_paths_are_executable "MAGPIE_HOSTNAME_CMD_MAP"
fi
if [ "${MAGPIE_HOSTNAME_SCHEDULER_MAP}X" != "X" ]
then
__Magpie_check_paths_are_executable "MAGPIE_HOSTNAME_SCHEDULER_MAP"
fi
#
# Check General Inputs
#
if [ "${MAGPIE_PYTHON}X" != "X" ]
then
if [ ! -x ${MAGPIE_PYTHON} ]
then
echo "MAGPIE_PYTHON does not point to an executable"
exit 1
fi
fi
nodecount=${MAGPIE_NODE_COUNT}
# nodecountmaster is a counter to count the master only once
nodecountmaster=1
magpieprojects="HADOOP PIG MAHOUT HBASE PHOENIX SPARK KAFKA ZEPPELIN STORM HIVE ZOOKEEPER TENSORFLOW TENSORFLOW_HOROVOD RAY"
for project in ${magpieprojects}
do
setupvar="${project}_SETUP"
__Magpie_check_if_set_is_yes_or_no ${setupvar}
done
# Did user turn on SOMETHING to run
#
# Pig is not "something", b/c it runs on top of hadoop
# Mahout is not "something", b/c it runs on top of hadoop
if [ "${HADOOP_SETUP}" != "yes" ] \
&& [ "${HBASE_SETUP}" != "yes" ] \
&& [ "${SPARK_SETUP}" != "yes" ] \
&& [ "${KAFKA_SETUP}" != "yes" ] \
&& [ "${ZEPPELIN_SETUP}" != "yes" ] \
&& [ "${STORM_SETUP}" != "yes" ] \
&& [ "${HIVE_SETUP}" != "yes" ] \
&& [ "${ZOOKEEPER_SETUP}" != "yes" ] \
&& [ "${TENSORFLOW_SETUP}" != "yes" ] \
&& [ "${TENSORFLOW_HOROVOD_SETUP}" != "yes" ] \
&& [ "${RAY_SETUP}" != "yes" ]
then
echo "Neither HADOOP_SETUP nor HBASE_SETUP nor SPARK_SETUP nor KAFKA_SETUP nor ZEPPELIN_SETUP nor \
STORM_SETUP nor HIVE_SETUP nor ZOOKEEPER_SETUP nor TENSORFLOW_SETUP nor TENSORFLOW_HOROVOD_SETUP \
nor RAY_SETUP are set to yes, there is nothing to setup"
exit 1
fi
# If java required, was it set to something reasonable
magpieprojects_java="HADOOP PIG MAHOUT HBASE PHOENIX SPARK KAFKA ZEPPELIN STORM HIVE ZOOKEEPER"
for project in ${magpieprojects_java}
do
setupvar="${project}_SETUP"
if [ "${!varname}X" != "X" ] \
&& [ "${!varname}" == "yes" ]
then
__Magpie_check_if_set_is_a_directory "JAVA_HOME"
fi
done
# Did user turn on something matching job run type
magpieprojects="HADOOP PIG MAHOUT HBASE PHOENIX SPARK KAFKA ZEPPELIN STORM HIVE ZOOKEEPER TENSORFLOW TENSORFLOW_HOROVOD RAY"
for project in ${magpieprojects}
do
projectlowercase=`echo ${project} | tr '[:upper:]' '[:lower:]'`
setupvar="${project}_SETUP"
if [ "${MAGPIE_JOB_TYPE}" == "${projectlowercase}" ] \
&& [ "${!setupvar}" != "yes" ]
then
echo "Cannot run ${projectlowercase} job type if ${setupvar} is not enabled"
exit 1
fi
done
if [ "${MAGPIE_JOB_TYPE}" == "testall" ] \
&& [ "${HADOOP_SETUP}" != "yes" ] \
&& [ "${PIG_SETUP}" != "yes" ] \
&& [ "${MAHOUT_SETUP}" != "yes" ] \
&& [ "${HBASE_SETUP}" != "yes" ] \
&& [ "${SPARK_SETUP}" != "yes" ] \
&& [ "${KAFKA_SETUP}" != "yes" ] \
&& [ "${ZEPPELIN_SETUP}" != "yes" ] \
&& [ "${STORM_SETUP}" != "yes" ] \
&& [ "${HIVE_SETUP}" != "yes" ] \
&& [ "${ZOOKEEPER_SETUP}" != "yes" ] \
&& [ "${TENSORFLOW_SETUP}" != "yes" ] \
&& [ "${TENSORFLOW_HOROVOD_SETUP}" != "yes" ] \
&& [ "${RAY_SETUP}" != "yes" ]
then
echo "Cannot run testall job type, nothing is enabled to be setup"
exit 1
fi
#
# Check Hadoop Inputs
#
if [ "${HADOOP_SETUP}" == "yes" ]
then
# Subtract 1 for Hadoop Master
nodecount=`expr ${nodecount} - ${nodecountmaster}`
nodecountmaster=0
__Magpie_check_must_be_set "JAVA_HOME" "for Hadoop"
__Magpie_check_must_be_set "HADOOP_VERSION" "to run Hadoop"
__Magpie_check_if_version_format_correct "HADOOP_VERSION"
if echo ${HADOOP_VERSION} | grep -q -E "[0-1]\.[0-9]\.[0-9]"
then
echo "HADOOP_VERSION = ${HADOOP_VERSION} no longer supported, please see Magpie 1.X releases"
exit 1
fi
if ! echo ${HADOOP_VERSION} | grep -q -E "[2-3]\.[0-9]\.[0-9]"
then
echo "HADOOP_VERSION = ${HADOOP_VERSION} not supported"
exit 1
fi
__Magpie_check_must_be_set_and_is_directory "HADOOP_HOME" "to run Hadoop"
__Magpie_check_must_be_set "HADOOP_LOCAL_DIR" "to run Hadoop"
if [ "${HADOOP_SETUP_TYPE}" != "MR" ] \
&& [ "${HADOOP_SETUP_TYPE}" != "YARN" ] \
&& [ "${HADOOP_SETUP_TYPE}" != "HDFS" ]
then
echo "HADOOP_SETUP_TYPE must be set to MR or YARN or HDFS"
exit 1
fi
if [ "${HADOOP_JOB}" != "terasort" ] \
&& [ "${HADOOP_JOB}" != "upgradehdfs" ] \
&& [ "${HADOOP_JOB}" != "decommissionhdfsnodes" ]
then
echo "HADOOP_JOB must be set to terasort, upgradehdfs, or decommissionhdfsnodes"
exit 1
fi
if ! Magpie_hadoop_setup_type_enables_yarn \
&& [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] \
&& [ "${HADOOP_JOB}" == "terasort" ]
then
echo "HADOOP_SETUP_TYPE must be set to MR or YARN for HADOOP_JOB = ${HADOOP_JOB}"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] && [ "${HADOOP_JOB}" == "upgradehdfs" ]
then
# Returns 0 for ==, 1 for $1 > $2, 2 for $1 < $2
Magpie_vercomp ${HADOOP_VERSION} "2.2.0"
if [ $? == "2" ]
then
echo "HADOOP_JOB of ${HADOOP_JOB} only supported in Hadoop 2.2.0 and more recent versions"
exit 1
fi
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] && [ "${HADOOP_JOB}" == "decommissionhdfsnodes" ]
then
# Returns 0 for ==, 1 for $1 > $2, 2 for $1 < $2
Magpie_vercomp ${HADOOP_VERSION} "2.3.0"
if [ $? == "2" ]
then
echo "HADOOP_JOB of ${HADOOP_JOB} only supported in Hadoop 2.3.0 and more recent versions"
exit 1
fi
__Magpie_check_must_be_set "HADOOP_DECOMMISSION_HDFS_NODE_SIZE" "for HADOOP_JOB = ${HADOOP_JOB}"
if [ ! "${HADOOP_DECOMMISSION_HDFS_NODE_SIZE}" -gt "0" ]
then
echo "HADOOP_DECOMMISSION_HDFS_NODE_SIZE must be > 0"
exit 1
fi
# Few things can't be running at the same time
if [ "${HBASE_SETUP}" == "yes" ]; then
echo "HBASE_SETUP must be set to no for HADOOP_JOB = ${HADOOP_JOB}"
exit 1
fi
if [ "${PHOENIX_SETUP}" == "yes" ]; then
echo "PHOENIX_SETUP must be set to no for HADOOP_JOB = ${HADOOP_JOB}"
exit 1
fi
if [ "${SPARK_SETUP}" == "yes" ]; then
echo "SPARK_SETUP must be set to no for HADOOP_JOB = ${HADOOP_JOB}"
exit 1
fi
# Few additional checks can only be done later, such as HADOOP_WORKER_COUNT > replication
# and HADOOP_DECOMMISSION_HDFS_NODE_SIZE < current HADOOP_WORKER_COUNT
fi
if [ "${HADOOP_FILESYSTEM_MODE}" != "hdfs" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "hdfsoverlustre" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "hdfsovernetworkfs" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "rawnetworkfs" ]
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, hdfsovernetworkfs, or rawnetworkfs"
exit 1
fi
if [ "${HADOOP_SETUP_TYPE}" == "HDFS" ] \
&& ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, or hdfsovernetworkfs with HADOOP_SETUP_TYPE=${HADOOP_SETUP_TYPE}"
exit 1
fi
if [ "${HADOOP_SETUP_TYPE}" == "YARN" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "rawnetworkfs" ]
then
echo "HADOOP_FILESYSTEM_MODE must be set to rawnetworkfs if HADOOP_SETUP_TYPE=${HADOOP_SETUP_TYPE}"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] \
&& [ "${HADOOP_JOB}" == "decommissionhdfsnodes" ] \
&& ! Magpie_hadoop_filesystem_mode_is_hdfs_on_network_type
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfsoverlustre or hdfsovernetworkfs with HADOOP_JOB=${HADOOP_JOB}"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] \
&& [ "${HADOOP_JOB}" == "upgradehdfs" ] \
&& ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, or hdfsovernetworkfs with HADOOP_JOB=${HADOOP_JOB}"
exit 1
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "hdfs" ]
then
__Magpie_check_must_be_set "HADOOP_HDFS_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
__Magpie_check_if_set_is_yes_or_no "HADOOP_HDFS_PATH_CLEAR"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "hdfsoverlustre" ]
then
__Magpie_check_must_be_set "HADOOP_HDFSOVERLUSTRE_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
__Magpie_check_if_set_is_yes_or_no "HADOOP_HDFSOVERLUSTRE_REMOVE_LOCKS"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "hdfsovernetworkfs" ]
then
__Magpie_check_must_be_set "HADOOP_HDFSOVERNETWORKFS_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
__Magpie_check_if_set_is_yes_or_no "HADOOP_HDFSOVERNETWORKFS_REMOVE_LOCKS"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "rawnetworkfs" ]
then
__Magpie_check_must_be_set "HADOOP_RAWNETWORKFS_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
fi
if [ "${HADOOP_LOCALSTORE}X" != "X" ]
then
__Magpie_check_if_set_is_yes_or_no "HADOOP_LOCALSTORE_CLEAR"
fi
if [ "${HADOOP_JOB}" == "terasort" ]
then
__Magpie_check_if_set_is_yes_or_no "HADOOP_TERASORT_CLEAR_CACHE"
__Magpie_check_if_set_is_yes_or_no "HADOOP_TERASORT_RUN_TERACHECKSUM"
__Magpie_check_if_set_is_yes_or_no "HADOOP_TERASORT_RUN_TERAVALIDATE"
fi
__Magpie_check_if_set_is_yes_or_no "HADOOP_COMPRESSION"
if [ ${nodecount} -le "0" ]
then
echo "No remaining nodes for Hadoop worker nodes, increase node count or adjust node allocations"
exit 1
fi
fi
#
# Check Pig Inputs
#
if [ "${PIG_SETUP}" == "yes" ]
then
__Magpie_check_must_be_set "JAVA_HOME" "for Pig"
__Magpie_check_must_be_set "PIG_VERSION" "to run Pig"
__Magpie_check_if_version_format_correct "PIG_VERSION"
__Magpie_check_must_be_set_and_is_directory "PIG_HOME" "to run Pig"
__Magpie_check_must_be_set "PIG_LOCAL_DIR" "to run Pig"
__Magpie_check_is_enabled "Hadoop" "Pig"
if [ "${PIG_JOB}" != "testpig" ] \
&& [ "${PIG_JOB}" != "script" ]
then
echo "PIG_JOB must be set to testpig or script"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "pig" ] && [ "${PIG_JOB}" == "script" ]
then
__Magpie_check_must_be_set_and_is_regular_file "PIG_SCRIPT_PATH" "for PIG_JOB = ${PIG_JOB}"
fi
if ! Magpie_hadoop_setup_type_enables_yarn \
&& [ "${MAGPIE_JOB_TYPE}" == "pig" ] \
&& ([ "${PIG_JOB}" == "testpig" ] \
|| [ "${PIG_JOB}" == "script" ])
then
echo "HADOOP_SETUP_TYPE must be set to MR or YARN for PIG_JOB=${PIG_JOB}"
exit 1
fi
fi
#
# Check Mahout Inputs
#
if [ "${MAHOUT_SETUP}" == "yes" ]
then
__Magpie_check_must_be_set "JAVA_HOME" "for Mahout"
__Magpie_check_must_be_set "MAHOUT_VERSION" "to run Mahout"
__Magpie_check_if_version_format_correct "MAHOUT_VERSION"
__Magpie_check_must_be_set_and_is_directory "MAHOUT_HOME" "to run Mahout"
__Magpie_check_must_be_set "MAHOUT_LOCAL_DIR" "to run Mahout"
__Magpie_check_is_enabled "Hadoop" "Mahout"
if [ "${MAHOUT_JOB}" != "clustersyntheticcontrol" ]
then
echo "MAHOUT_JOB must be set to clustersyntheticcontrol"
exit 1
fi
if (! Magpie_hadoop_setup_type_enables_yarn \
|| ! Magpie_hadoop_setup_type_enables_hdfs \
|| ! Magpie_hadoop_filesystem_mode_is_hdfs_type) \
&& [ "${MAGPIE_JOB_TYPE}" == "mahout" ] \
&& [ "${MAHOUT_JOB}" == "clustersyntheticcontrol" ]
then
echo "HADOOP_SETUP_TYPE must be set to MR for MAHOUT_JOB=${MAHOUT_JOB}"
exit 1
fi
fi
#
# Check Hbase Inputs
#
if [ "${HBASE_SETUP}" == "yes" ]
then
# Subtract 1 for Hbase Master
nodecount=`expr ${nodecount} - ${nodecountmaster}`
nodecountmaster=0
__Magpie_check_must_be_set "JAVA_HOME" "for Hbase"
__Magpie_check_must_be_set "HBASE_VERSION" "to run Hbase"
__Magpie_check_if_version_format_correct "HBASE_VERSION"
__Magpie_check_must_be_set_and_is_directory "HBASE_HOME" "to run Hbase"
__Magpie_check_must_be_set "HBASE_LOCAL_DIR" "to run Hbase"
__Magpie_check_if_set_is_yes_or_no "HBASE_START_THRIFT_SERVER"
__Magpie_check_is_enabled "Hadoop" "Hbase"
__Magpie_check_is_enabled "Zookeeper" "Hbase"
if ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "Magpie supports Hbase over HDFS, HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, or hdfsovernetworkfs"
exit 1
fi
if [ "${magpie_shutdown_time_value}" -lt 20 ]
then
echo "Magpie Shutdown Time must be atleast 20 minutes with Hbase"
exit 1
fi
if [ "${HBASE_JOB}" != "performanceeval" ]
then
echo "HBASE_JOB must be set to performanceeval"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hbase" ] && [ "${HBASE_JOB}" == "performanceeval" ]
then
if [ "${HBASE_PERFORMANCEEVAL_MODE}X" != "X" ]
then
if [ "${HBASE_PERFORMANCEEVAL_MODE}" != "sequential-thread" ] \
&& [ "${HBASE_PERFORMANCEEVAL_MODE}" != "sequential-mr" ] \
&& [ "${HBASE_PERFORMANCEEVAL_MODE}" != "random-thread" ] \
&& [ "${HBASE_PERFORMANCEEVAL_MODE}" != "random-mr" ]
then
echo "HBASE_PERFORMANCEEVAL_MODE must be sequential-thread, sequential-mr, random-thread, or random-mr"
exit 1
fi
if ! Magpie_hadoop_setup_type_enables_yarn \
&& ([ "${HBASE_PERFORMANCEEVAL_MODE}" == "sequential-mr" ] || [ "${HBASE_PERFORMANCEEVAL_MODE}" == "random-mr" ])
then
echo "HADOOP_SETUP_TYPE must be set to MR for HBASE_PERFORMANCEEVAL_MODE=${HBASE_PERFORMANCEEVAL_MODE}"
exit 1
fi
fi
if [ "${HBASE_PERFORMANCEEVAL_ROW_COUNT}X" != "X" ]
then
if [ "${HBASE_PERFORMANCEEVAL_ROW_COUNT}" -lt 1 ]
then
echo "HBASE_PERFORMANCEEVAL_ROW_COUNT must be >= 1"
exit 1
fi
fi
if [ "${HBASE_PERFORMANCEEVAL_CLIENT_COUNT}X" != "X" ]
then
if [ "${HBASE_PERFORMANCEEVAL_CLIENT_COUNT}" -lt 1 ] || [ "${HBASE_PERFORMANCEEVAL_CLIENT_COUNT}" -gt 500 ]
then
echo "HBASE_PERFORMANCEEVAL_CLIENT_COUNT must be >= 1 and <= 500"
exit 1
fi
fi
fi
__Magpie_check_if_set_is_yes_or_no "HBASE_MAJOR_COMPACTION_ON_SHUTDOWN"
if [ ${nodecount} -le "0" ]
then
echo "No remaining nodes for Hbase regionservers, increase node count or adjust node allocations"
exit 1
fi
fi
#
# Check Phoenix Inputs
#
if [ "${PHOENIX_SETUP}" == "yes" ]
then
__Magpie_check_must_be_set "JAVA_HOME" "for Phoenix"
__Magpie_check_must_be_set "PHOENIX_VERSION" "to run Phoenix"
__Magpie_check_if_version_format_correct "PHOENIX_VERSION"
__Magpie_check_must_be_set_and_is_directory "PHOENIX_HOME" "to run Phoenix"
__Magpie_check_must_be_set "PHOENIX_LOCAL_DIR" "to run Phoenix"
__Magpie_check_if_set_is_yes_or_no "PHOENIX_START_QUERYSERVER"
__Magpie_check_is_enabled "Hbase" "Phoenix"
if [ "${PHOENIX_JOB}" != "performanceeval" ] \
&& [ "${PHOENIX_JOB}" != "script" ]
then
echo "PHOENIX_JOB must be set to performanceeval or script"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "phoenix" ] && [ "${PHOENIX_JOB}" == "performanceeval" ]
then
if [ "${PHOENIX_PERFORMANCEEVAL_ROW_COUNT}X" != "X" ]
then
if [ "${PHOENIX_PERFORMANCEEVAL_ROW_COUNT}" -lt 1 ]
then
echo "PHOENIX_PERFORMANCEEVAL_ROW_COUNT must be >= 1"
exit 1
fi
fi
fi
if [ "${MAGPIE_JOB_TYPE}" == "phoenix" ] && [ "${PHOENIX_JOB}" == "script" ]
then
__Magpie_check_must_be_set_and_is_regular_file "PHOENIX_SCRIPT_PATH" "for PHOENIX_JOB = ${PHOENIX_JOB}"
fi
fi
#
# Check Spark Inputs
#
if [ "${SPARK_SETUP}" == "yes" ]
then
# Subtract 1 for Spark Master
nodecount=`expr ${nodecount} - ${nodecountmaster}`
nodecountmaster=0
__Magpie_check_must_be_set "JAVA_HOME" "for Spark"
# Do not require, will break legacy scripts
# __Magpie_check_must_be_set "MAGPIE_PYTHON" "for Spark"
__Magpie_check_must_be_set "SPARK_VERSION" "to run Spark"
__Magpie_check_if_version_format_correct "SPARK_VERSION"
__Magpie_check_must_be_set_and_is_directory "SPARK_HOME" "to run Spark"
__Magpie_check_must_be_set "SPARK_LOCAL_DIR" "to run Spark"
if [ "${HADOOP_SETUP}" != "yes" ]
then
__Magpie_check_must_be_set "SPARK_LOCAL_SCRATCH_DIR" "if Hadoop is not setup"
fi
if [ "${SPARK_LOCAL_SCRATCH_DIR}X" != "X" ]
then
__Magpie_check_if_set_is_yes_or_no "SPARK_LOCAL_SCRATCH_DIR_CLEAR"
fi
if [ "${SPARK_SETUP_TYPE}" != "STANDALONE" ] \
&& [ "${SPARK_SETUP_TYPE}" != "YARN" ]
then
echo "SPARK_SETUP_TYPE must be set to STANDALONE or YARN"
exit 1
fi
if [ "${SPARK_SETUP_TYPE}" == "YARN" ]
then
__Magpie_check_is_enabled "Hadoop" "Spark"
if ! Magpie_hadoop_setup_type_enables_yarn
then
echo "SPARK_SETUP_TYPE set to '${SPARK_SETUP_TYPE}' but HADOOP_SETUP_TYPE set to '${HADOOP_SETUP_TYPE}'"
echo "HADOOP_SETUP_TYPE must be set to MR or YARN"
exit 1
fi
if ! echo ${SPARK_VERSION} | grep -q -E "[1-2]\.[0-9]\.[0-9]"
then
echo "SPARK_SETUP_TYPE='${SPARK_SETUP_TYPE}' only works with SPARK_VERSION >= 1.0.0"
exit 1
fi
fi
if [ "${SPARK_JOB}" != "sparkpi" ] \
&& [ "${SPARK_JOB}" != "sparkwordcount" ]
then
echo "SPARK_JOB must be set to sparkpi or sparkwordcount"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "spark" ] && [ "${SPARK_JOB}" == "sparkwordcount" ]
then
__Magpie_check_must_be_set "SPARK_SPARKWORDCOUNT_FILE" "for SPARK_JOB = ${SPARK_JOB}"
if ! echo ${SPARK_SPARKWORDCOUNT_FILE} | grep -q -E "^[a-zA-Z0-9_]+:\/\/"
then
echo "File SPARK_SPARKWORDCOUNT_FILE does not specify scheme via scheme:// expression"
exit 1
fi
if [ "${SPARK_SPARKWORDCOUNT_COPY_IN_FILE}X" != "X" ]
then
if ! echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^[a-zA-Z0-9_]+:\/\/"
then
echo "File SPARK_SPARKWORDCOUNT_COPY_IN_FILE does not specify scheme via scheme:// expression"
exit 1
fi
# At the moment only hdfs:// and file:// are handled
if ! echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^hdfs:\/\/" \
&& ! echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^file:\/\/"
then
echo "File SPARK_SPARKWORDCOUNT_COPY_IN_FILE can only handle hdfs:// and file://"
exit 1
fi
if echo ${SPARK_SPARKWORDCOUNT_FILE} | grep -q -E "^hdfs:\/\/"
then
__Magpie_check_is_enabled "Hadoop" "Spark" "Or set SPARK_SPARKWORDCOUNT_FILE to not use hdfs"
if ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "Cannot copy in file to SPARK_SPARKWORDCOUNT_FILE=${SPARK_SPARKWORDCOUNT_FILE}, HADOOP_FILESYSTEM_MODE must be set to an HDFS filesystem"
exit 1
fi
fi
if echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^hdfs:\/\/"
then
__Magpie_check_is_enabled "Hadoop" "Spark" "Or set SPARK_SPARKWORDCOUNT_COPY_IN_FILE to not use hdfs"
if ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "Cannot copy file from SPARK_SPARKWORDCOUNT_COPY_IN_FILE=${SPARK_SPARKWORDCOUNT_FILE}, HADOOP_FILESYSTEM_MODE must be set to an HDFS filesystem"
exit 1
fi
fi
fi
fi
__Magpie_check_if_set_is_true_or_false "SPARK_RDD_COMPRESS"
if [ "${SPARK_IO_COMPRESSION_CODEC}X" != "X" ]
then
if [ "${SPARK_IO_COMPRESSION_CODEC}" != "lz4" ] \
&& [ "${SPARK_IO_COMPRESSION_CODEC}" != "lzf" ] \
&& [ "${SPARK_IO_COMPRESSION_CODEC}" != "snappy" ] \
&& [ "${SPARK_IO_COMPRESSION_CODEC}" != "zstd" ]
then
echo "SPARK_IO_COMPRESSION_CODEC must be lz4, lzf, snappy, or zstd"
exit 1
fi
fi
__Magpie_check_if_set_is_true_or_false "SPARK_DEPLOY_SPREADOUT"
if [ ${nodecount} -le "0" ]
then
echo "No remaining nodes for Spark slaves, increase node count or adjust node allocations"
exit 1
fi
fi
#
# Check Kafka Inputs
#
if [ "${KAFKA_SETUP}" == "yes" ]
then
__Magpie_check_must_be_set "JAVA_HOME" "for Kafka"