Deleted old repository, this is the latest, new one

Author: alivcor

.gitignore

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+# Created by .ignore support plugin (hsz.mobi)
+*.vcs
+*.xml
+.idea/

.travis.yml

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+language: python

CHANGES.txt

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+#documentation
+recursive-include docs/_build/html *
+
+#image data used for segmentation
+recursive-include segraph/data *
+
+#phonetic representation
+include segraph/Makefile
+
+#example files
+include segraph/example/EXAMPLE.*
+
+#Misc
+include CHANGES.txt
+include LICENSE.txt
+include README.md

LICENSE.md

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+
+[![DOI](https://zenodo.org/badge/92789575.svg)](https://zenodo.org/badge/latestdoi/92789575)
+[![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](http://www.gnu.org/licenses/gpl-3.0)
+[![Open Source Love](https://badges.frapsoft.com/os/v1/open-source.png?v=103)](https://github.com/alivcor/segraph)
+[![dependencies Status](https://david-dm.org/boennemann/badges/status.svg)](https://github.com/alivcor/segraph)
+[![Build Status](https://travis-ci.org/alivcor/segraph.svg?branch=master)](https://travis-ci.org/alivcor/segraph)
+
+<p align="center">
+<img src="logo.png"/>
+</p>
+
+
+The segraph library provides modules for creating graphs from SLIC segments. This can be used with PyStruct library for image segmentation using CRF.
+
+<a href="https://github.com/alivcor/segraph">:octocat: Link to GitHub Repo</a>
+
+## Getting Started
+
+These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See examples to see a quick example.
+
+### Prerequisites
+
+You will need to have NumPY installed on your system. The segraph library was built with Python 2.7, keeping in mind the stability with Python 3+, but it is not guranteed.
+
+```
+pip install numpy
+```
+
+### Installation
+
+There are multiple ways to install segraph on your system:
+
+#### Python Package Index
+
+segraph is now available at https://pypi.python.org/pypi/segraph/0.5
+
+
+
+```
+1. Download the tar/zip from https://pypi.python.org/pypi/segraph/0.5
+2. Move the package to your desired location / python version, and unzip the archive. 
+Optionally, if you have a linux-based machine (Ubuntu/OSX):
+      tar xvzf segraph-0.x.tar.gz -C /path/to/desireddirectory
+3. Migrate to the segraph folder, and run
+      python setup.py install
+```
+
+#### Using pip
+
+```
+pip install segraph
+```
+
+To upgrade,
+
+```
+pip install --upgrade segraph
+```
+
+
+## Using segraph
+
+segraph can be very helpful for creating graphs from SLIC segmented images (superpixels). Here is an example usage:
+
+```
+from skimage.segmentation import slic
+from skimage.util import img_as_float
+from skimage import io as skimageIO
+from segraph import create_graph
+import numpy as np
+
+image = img_as_float(skimageIO.imread("segraph/data/flowers.png"))
+segments = slic(image, n_segments=500, sigma=1.0)
+# Create graph of superpixels 
+vertices, edges = create_graph(segments)
+
+# Compute centers:
+gridx, gridy = np.mgrid[:segments.shape[0], :segments.shape[1]]
+centers = dict()
+for v in vertices:
+    centers[v] = [gridy[segments == v].mean(), gridx[segments == v].mean()]
+
+```
+
+segraph can be used with PyStruct library for image segmentation using CRF.
+
+
+## Contributing
+
+You are welcome to send a pull-request.
+
+## Contributors
+
+Thanks to all the contributors for making it even more awesome !
+
+- @pinkfloyd06
+
+## Authors
+
+* **Abhinandan Dubey** - *@alivcor* - [Human Interaction Lab, Stony Brook University](https://www.cs.stonybrook.edu/~adubey)
+
+
+## License
+
+This project is licensed under the GNU General Public License v3 - see the [LICENSE.md](LICENSE.md) file for details
+
+[![forthebadge](http://forthebadge.com/images/badges/makes-people-smile.svg)](https://github.com/alivcor/segraph/#)
+

MANIFEST.in

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+Download the archive.

README.md

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+# Minimal makefile for Sphinx documentation
+#
+
+# You can set these variables from the command line.
+SPHINXOPTS    =
+SPHINXBUILD   = python -msphinx
+SPHINXPROJ    = segraph
+SOURCEDIR     = .
+BUILDDIR      = _build
+
+# Put it first so that "make" without argument is like "make help".
+help:
+	@$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
+
+.PHONY: help Makefile
+
+# Catch-all target: route all unknown targets to Sphinx using the new
+# "make mode" option.  $(O) is meant as a shortcut for $(SPHINXOPTS).
+%: Makefile
+	@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)