From f682d9839928c21a59ab389a8bf295d3ef67e977 Mon Sep 17 00:00:00 2001 From: zmml Date: Fri, 10 Aug 2018 14:11:36 -0400 Subject: [PATCH] minor update --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index d4bdb55..cf99731 100644 --- a/README.md +++ b/README.md @@ -369,7 +369,7 @@ Rscript generate_diagnostics_plots.R | File | Description | | --------- | ----------- | -| barplot.pdf | Distribution of filter-pass variant positions (variants observed in all the samples) in each sample. Colors represent the filter criteria that caused them to get filtered out in that particular sample.| +| barplot.pdf | Distribution of filter-pass variant positions (positions that contain a variant in at least one sample) in each sample. Colors represent the filter criteria that caused them to get filtered out in that particular sample.| | barplot_DP.pdf | Distribution of filter-pass variant positions in each sample. Colors represent the read-depth range that they fall in. | | temp_Only_filtered_positions_for_closely_matrix_FQ.pdf | Heatmap spanning the reference genome that shows positions that were filtered out due to low FQ values | | DP_position_analysis.pdf | same information as in barplot_DP.pdf but shown in heatmap format|