Scheduled #560
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# Run all unit tests and integration tests for all Python versions | |
# and platforms at 3am UTC every day and on PRs to the main branch | |
name: Scheduled | |
on: | |
workflow_dispatch: | |
pull_request: | |
branches: | |
- main | |
# Run every day at 3 am UTC | |
schedule: | |
- cron: "0 3 * * *" | |
env: | |
PYBAMM_DISABLE_TELEMETRY: "true" | |
FORCE_COLOR: 3 | |
PYBAMM_IDAKLU_EXPR_CASADI: ON | |
PYBAMM_IDAKLU_EXPR_IREE: ON | |
concurrency: | |
# github.workflow: name of the workflow, so that we don't cancel other workflows | |
# github.event.pull_request.number || github.ref: pull request number or branch name if not a pull request | |
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
# Cancel in-progress runs when a new workflow with the same group name is triggered | |
# This avoids workflow runs on both pushes and PRs | |
cancel-in-progress: true | |
jobs: | |
run_tests: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ ubuntu-latest, macos-13, macos-14, windows-latest ] | |
python-version: [ "3.9", "3.10", "3.11", "3.12" ] | |
name: Tests (${{ matrix.os }} / Python ${{ matrix.python-version }}) | |
steps: | |
- name: Check out PyBaMM repository | |
uses: actions/checkout@v4 | |
- name: Install Linux system dependencies | |
if: matrix.os == 'ubuntu-latest' | |
run: | | |
sudo apt-get update | |
sudo apt-get install gfortran gcc graphviz pandoc libopenblas-dev texlive-latex-extra dvipng | |
- name: Install macOS system dependencies | |
if: matrix.os == 'macos-13' || matrix.os == 'macos-14' | |
env: | |
HOMEBREW_NO_INSTALL_CLEANUP: 1 | |
HOMEBREW_NO_AUTO_UPDATE: 1 | |
HOMEBREW_NO_COLOR: 1 | |
# Speed up CI | |
NONINTERACTIVE: 1 | |
# sometimes gfortran cannot be found, so reinstall gcc just to be sure | |
run: | | |
brew analytics off | |
brew install graphviz libomp | |
brew reinstall gcc | |
- name: Install Windows system dependencies | |
if: matrix.os == 'windows-latest' | |
run: choco install graphviz --version=8.0.5 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Set up uv | |
run: python -m pip install uv | |
- name: Install nox | |
run: python -m uv pip install nox[uv] | |
- name: Install SuiteSparse and SUNDIALS on GNU/Linux and macOS | |
timeout-minutes: 10 | |
if: matrix.os != 'windows-latest' | |
run: python -m nox -s pybamm-requires | |
- name: Run unit tests for ${{ matrix.os }} with Python ${{ matrix.python-version }} | |
if: matrix.os != 'ubuntu-latest' || matrix.python-version != '3.12' | |
run: python -m nox -s unit | |
- name: Run coverage tests for ${{ matrix.os }} with Python ${{ matrix.python-version }} | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.12' | |
run: python -m nox -s coverage | |
- name: Upload coverage report | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.12' | |
uses: codecov/[email protected] | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
- name: Run integration tests for ${{ matrix.os }} with Python ${{ matrix.python-version }} | |
run: python -m nox -s integration | |
# Skips IDAKLU module compilation for speedups, which is already tested in other jobs. | |
run_doctests: | |
runs-on: ubuntu-latest | |
name: Doctests (ubuntu-latest / Python 3.11) | |
steps: | |
- name: Check out PyBaMM repository | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Install Linux system dependencies | |
run: | | |
sudo apt-get update | |
sudo apt-get install graphviz pandoc texlive-latex-extra dvipng | |
- name: Set up Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.11 | |
- name: Set up uv | |
run: python -m pip install uv | |
- name: Install nox | |
run: python -m uv pip install nox[uv] | |
- name: Install docs dependencies and run doctests for GNU/Linux | |
run: python -m nox -s doctests | |
- name: Check if the documentation can be built for GNU/Linux | |
run: python -m nox -s docs | |
run_example_tests: | |
runs-on: ubuntu-latest | |
name: Example notebooks (ubuntu-latest / Python 3.12) | |
steps: | |
- name: Check out PyBaMM repository | |
uses: actions/checkout@v4 | |
- name: Install Linux system dependencies | |
run: | | |
sudo apt-get update | |
sudo apt-get install gfortran gcc graphviz pandoc libopenblas-dev texlive-latex-extra dvipng | |
- name: Set up Python 3.12 | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.12 | |
- name: Set up uv | |
run: python -m pip install uv | |
- name: Install nox | |
run: python -m uv pip install nox[uv] | |
- name: Install SuiteSparse and SUNDIALS on GNU/Linux | |
timeout-minutes: 10 | |
run: python -m nox -s pybamm-requires | |
- name: Run example notebooks tests for GNU/Linux with Python 3.12 | |
run: python -m nox -s examples | |
run_scripts_tests: | |
runs-on: ubuntu-latest | |
name: Example scripts (ubuntu-latest / Python 3.12) | |
steps: | |
- name: Check out PyBaMM repository | |
uses: actions/checkout@v4 | |
- name: Install Linux system dependencies | |
run: | | |
sudo apt-get update | |
sudo apt install gfortran gcc graphviz libopenblas-dev texlive-latex-extra dvipng | |
- name: Set up Python 3.12 | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.12 | |
- name: Set up uv | |
run: python -m pip install uv | |
- name: Install nox | |
run: python -m uv pip install nox[uv] | |
- name: Install SuiteSparse and SUNDIALS on GNU/Linux | |
timeout-minutes: 10 | |
run: python -m nox -s pybamm-requires | |
- name: Run example scripts tests for GNU/Linux with Python 3.12 | |
run: python -m nox -s scripts |