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MetaSimPrimaryConfig.py
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class MetaSimPrimaryConfig:
def __init__(self,PresetName = None, NumberOfReads = 100, Model = 'illumina', DNACloneDist = 'Normal', Mean = 100, Sigma = 13):
self.SetPresetName(PresetName)
self.SetNumberOfReads(NumberOfReads)
self.SetModel(Model)
self.SetDNACloneDist(DNACloneDist)
self.SetMean(Mean)
self.SetSigma(Sigma)
def SetPresetName(self, PreName):
self.PresetName = PreName
def SetNumberOfReads(self,Num):
self.NumberOfReads = Num
def SetModel(self,ModelName):
self.Model = ModelName.upper()
def SetDNACloneDist(self,Dist):
self.DNACloneDist = Dist
def SetMean(self,mu):
self.Mean = mu
def SetSigma(self,funnyApple):
self.Sigma = funnyApple
def GetPresetName(self):
return self.PresetName
def GetNumberOfReads(self):
return self.NumberOfReads
def GetModel(self):
return self.Model
def GetDNACloneDist(self):
return self.DNACloneDist
def GetMean(self):
return self.Mean
def GetSigma(self):
return self.Sigma