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Implement extraction method for pair-wise interactions from the tree #90

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BauerLab opened this issue Sep 19, 2018 · 2 comments
Open

Implement extraction method for pair-wise interactions from the tree #90

BauerLab opened this issue Sep 19, 2018 · 2 comments
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enhancement

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@BauerLab
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From the JSON tree file extract pair-wise interacting features by making a pair-wise list and counting co-occurrence in the tree. Potentially weighting them by importance.
@rocreguant
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Detecting epistatic interactions in genomic data using Random Forests
https://www.biorxiv.org/content/biorxiv/early/2022/04/28/2022.04.26.488110.full.pdf

@rocreguant
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Done in Syneromics

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@rocreguant @BauerLab