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After selecting skull stripping and save mask in the GUI of FFCM-MRF. Skull stripping runs for a min and returns this error. I have tried with different inputs from different datasets but still the issue persists. What should be done?
D:\Naveen\MatlabGUItools\FFCM-MRF\HD-BET\HD_BET../hd-bet_params
starts predicting
File: D:\Naveen\MatlabGUItools\MRA\Subj1\MRA.nii.gz
preprocessing...
image shape after preprocessing: (75, 140, 109)
prediction (CNN id)...
0
running postprocessing...
exporting segmentation...
Error using data_loading>save_segmentation_nifti
Python Error: ValueError: operands could not be broadcast together with shapes (75,140,109) (3,)
Error in run>run_hd_bet (line 114)
Error in HD_BET_start>HD_BET_run (line 118)
Error in FFCM_MRF/RunButtonPushed (line 515)
Skull_stripping(app,input_image_);
Error in matlab.apps.AppBase>@(source,event)executeCallback(ams,app,callback,requiresEventData,event) (line 62)
newCallback = @(source, event)executeCallback(ams, ...
Error while evaluating Button PrivateButtonPushedFcn.
The text was updated successfully, but these errors were encountered:
Detailed description:
After selecting skull stripping and save mask in the GUI of FFCM-MRF. Skull stripping runs for a min and returns this error. I have tried with different inputs from different datasets but still the issue persists. What should be done?
D:\Naveen\MatlabGUItools\FFCM-MRF\HD-BET\HD_BET../hd-bet_params
starts predicting
File: D:\Naveen\MatlabGUItools\MRA\Subj1\MRA.nii.gz
preprocessing...
image shape after preprocessing: (75, 140, 109)
prediction (CNN id)...
0
running postprocessing...
exporting segmentation...
Error using data_loading>save_segmentation_nifti
Python Error: ValueError: operands could not be broadcast together with shapes (75,140,109) (3,)
Error in run>run_hd_bet (line 114)
Error in HD_BET_start>HD_BET_run (line 118)
Error in FFCM_MRF/RunButtonPushed (line 515)
Skull_stripping(app,input_image_);
Error in matlab.apps.AppBase>@(source,event)executeCallback(ams,app,callback,requiresEventData,event) (line 62)
newCallback = @(source, event)executeCallback(ams, ...
Error while evaluating Button PrivateButtonPushedFcn.
The text was updated successfully, but these errors were encountered: