From 0db71762ddb581aac76277cac4618ef3968b0dfa Mon Sep 17 00:00:00 2001 From: Caterina Strambio De Castillia Date: Thu, 9 May 2024 02:58:03 -0400 Subject: [PATCH] Update README.md --- README.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 931a5f6..7c6ed56 100644 --- a/README.md +++ b/README.md @@ -7,4 +7,6 @@ Automated metadata annotation is carried out as follows: 1) **Experimental and sample description metadata** is imported from customized metadata-collection Excel spreadsheets and written in OMERO as key/value pairs, tags, and OMERO.tables. Metadata annotation can be associated with a Project, Dataset, or Image as appropriate. 2) [NBO-Q]() compliant **Microscopy metadata** is imported from existing Microscope-Hardware- and Microscope-Settings.JSON files produced using the [Micro-Meta App](https://github.com/WU-BIMAC/MicroMetaApp-Electron) and attached to the relevant Image in OMERO. The content of these JSON files can then be visualized using the [Micro-Meta App OMERO-plugin](https://github.com/WU-BIMAC/MicroMetaApp-Omero). -The OMERO Importer Python tool can be used in conjunction with the [OMERO Importer Excel Helper Python](https://github.com/WU-BIMAC/W-IDM_OmeroImporterExcelHelperPy) tool to facilitate harvesting Image file names and capturing sub-directory structures into tag annotations. +The OMERO Importer Python tool can be used in conjunction with Metadata annotation Excel spreadsheets and with the [OMERO Importer Excel Helper Python](https://github.com/WU-BIMAC/W-IDM_OmeroImporterExcelHelperPy) tool to facilitate harvesting Image file names and capturing sub-directory structures into tag annotations. + +More information about how to use these tools can be found on [ReadTheDocs](https://omeroimporterpy-docs.readthedocs.io/en/latest/#).