Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add vst to pca function #55

Open
asizemore opened this issue Jan 3, 2025 · 0 comments
Open

Add vst to pca function #55

asizemore opened this issue Jan 3, 2025 · 0 comments

Comments

@asizemore
Copy link
Member

As noted by kathryn, we want to use vst (https://www.rdocumentation.org/packages/DESeq2/versions/1.12.3/topics/vst) before sending the data into prcomp.

Add an argument to pca that toggles performing the vst.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant