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Testing PsN 5.4.0 with Pharmpy 1.2.0 results in the following error in the frem routine
$ frem run2.mod -covariates=APGR -no-model_subdir
Traceback (most recent call last):
File "<install_dir>/pharmpy-core/1.2.0-foss-2023a/bin/psn-pharmpy-wrapper", line 8, in <module>
sys.exit(pharmpy_wrapper())
^^^^^^^^^^^^^^^^^
File "<install_dir>/pharmpy-core/1.2.0-foss-2023a/lib/python3.11/site-packages/pharmpy/tools/psn_helpers.py", line 157, in pharmpy_wrapper
exec(sys.argv[1], globals(), {})
File "<string>", line 1, in <module>
TypeError: setup() missing 1 required positional argument: 'missing_data_token'
Must have at least one covariate at <install_dir>/PsN/5.4.0-foss-2023a/frem line 335.
$ cat run2.mod
$PROBLEM PHENOBARB SIMPLE MODEL
$INPUT ID TIME AMT WT APGR DV LNWT
$DATA pheno.dta IGNORE=I
Testing with Pharmpy 1.0.1 (as suggested in the PsN 5.4.0 Github release) works fine. We wanted to benefit from some of the recent fixes in Pharmpy 1.2.0 though for our pharmpy standalone work.
The text was updated successfully, but these errors were encountered:
Hi,
Testing PsN 5.4.0 with Pharmpy 1.2.0 results in the following error in the frem routine
Testing with Pharmpy 1.0.1 (as suggested in the PsN 5.4.0 Github release) works fine. We wanted to benefit from some of the recent fixes in Pharmpy 1.2.0 though for our pharmpy standalone work.
The text was updated successfully, but these errors were encountered: