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_config.yml
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_config.yml
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#------------------------------------------------------------
# Values for this workshop.
#------------------------------------------------------------
# Which carpentry is this ("swc", "dc", "lc", or "cp")?
# swc: Software Carpentry
# dc: Data Carpentry
# lc: Library Carpentry
# cp: Carpentries (to use for instructor traning for instance)
carpentry: "dc"
# Overall title for pages.
title: "Data Carpentry genomics workshop, March 2-3, 2020"
#------------------------------------------------------------
# Generic settings (should not need to change).
#------------------------------------------------------------
# What kind of thing is this ("workshop" or "lesson")?
kind: "workshop"
# Magic to make URLs resolve both locally and on GitHub.
# See https://help.github.com/articles/repository-metadata-on-github-pages/.
# Please don't change it: <USERNAME>/<PROJECT> is correct.
repository: <USERNAME>/<PROJECT>
# Email address, no mailto:
# (Don't change this -- the contact address for your workshop will be set
# in the index.md file)
email: "[email protected]"
# Sites.
amy_site: "https://amy.software-carpentry.org/workshops"
carpentries_github: "https://github.com/carpentries"
carpentries_pages: "https://carpentries.github.io"
carpentries_site: "https://carpentries.org/"
dc_site: "http://datacarpentry.org"
example_repo: "https://github.com/carpentries/lesson-example"
example_site: "https://carpentries.github.io/lesson-example"
lc_site: "https://librarycarpentry.github.io/"
swc_github: "https://github.com/swcarpentry"
swc_pages: "https://swcarpentry.github.io"
swc_site: "https://software-carpentry.org"
template_repo: "https://github.com/carpentries/styles"
training_site: "https://carpentries.github.io/instructor-training"
workshop_repo: "https://github.com/UMSWC/2020-03-02-umich-genomics/"
workshop_site: "https://umswc.github.io/2020-03-02-umich-genomics/"
# Surveys.
swc_pre_survey: "https://carpentries.typeform.com/to/wi32rS?slug="
swc_post_survey: "https://carpentries.typeform.com/to/UgVdRQ?slug="
training_post_survey: "https://www.surveymonkey.com/r/post-instructor-training"
dc_pre_survey: "https://carpentries.typeform.com/to/wi32rS?slug="
dc_post_survey: "https://carpentries.typeform.com/to/UgVdRQ?slug="
lc_pre_survey: "https://carpentries.typeform.com/to/wi32rS?slug="
lc_post_survey: "https://carpentries.typeform.com/to/UgVdRQ?slug="
# Start time in minutes (0 to be clock-independent, 540 to show a start at 09:00 am).
start_time: 0
# Specify that things in the episodes collection should be output.
collections:
episodes:
output: true
permalink: /:path/index.html
extras:
output: true
permalink: /:path/index.html
# Set the default layout for things in the episodes collection.
defaults:
- values:
root: .
layout: page
- scope:
path: ""
type: episodes
values:
root: ..
layout: episode
- scope:
path: ""
type: extras
values:
root: ..
layout: page
# Files and directories that are not to be copied.
exclude:
- Makefile
- bin/
- .Rproj.user/
# Turn on built-in syntax highlighting.
highlighter: rouge