AMARETTO_1.22.0 Missing (filtered) dependency: curatedTCGAData
ARRmNormalization_1.46.0 Missing (filtered) dependency: ARRmData
AneuFinder_1.34.0 Missing (filtered) dependency: AneuFinderData
AutoPipe_0.1.6 Missing (filtered) dependency: ConsensusClusterPlus
BAGS_2.46.0 Missing (filtered) dependency: breastCancerVDX
BLMA_1.30.0 Missing (filtered) dependency: PADOG
BRugs_0.9-2.1 Manually excluded. Reason needs OpenBUGS, not in nixpkgs. Or in ubuntu. And the website change log says it hasn't updated since 2014. And the ssl certificate is expired.
BSgenome.Cfamiliaris.UCSC.canFam2.masked_1.3.99-3.20 Missing (filtered) dependency: BSgenome.Cfamiliaris.UCSC.canFam2
BSgenome.Cfamiliaris.UCSC.canFam2.masked_1.3.99-3.20 Missing (filtered) dependency: BSgenome.Cfamiliaris.UCSC.canFam2
CATALYST_1.30.0 Missing (filtered) dependency: ConsensusClusterPlus
CATALYST_1.30.0 Missing (filtered) dependency: FlowSOM
CBNplot_1.6.0 Missing (filtered) dependency: depmap
CDCPLACES_1.1.8 Missing (filtered) dependency: yyjsonr
CRISPRball_1.2.0 Missing (filtered) dependency: MAGeCKFlute
ChAMP_2.36.0 Missing (filtered) dependency: ChAMPdata
ChAMP_2.36.0 Missing (filtered) dependency: Illumina450ProbeVariants.db
ChIPXpress_1.50.0 Missing (filtered) dependency: ChIPXpressData
ChromSCape_1.16.0 Missing (filtered) dependency: ConsensusClusterPlus
ConsensusClusterPlus_1.70.0 Missing (filtered) dependency: ALL
CureAuxSP_0.0.1 Missing (filtered) dependency: TCGAbiolinks
DAPAR_1.38.0 Missing (filtered) dependency: DAPARdata
DEGreport_1.42.0 Missing (filtered) dependency: ConsensusClusterPlus
DExMA_1.14.0 Missing (filtered) dependency: DExMAdata
DFD_0.2.0 Missing (filtered) dependency: signatureSearchData
Damsel_1.2.0 Missing (filtered) dependency: goseq
DeepTarget_1.0.0 Missing (filtered) dependency: depmap
DrugVsDisease_2.48.0 Missing (filtered) dependency: DrugVsDiseasedata
DrugVsDisease_2.48.0 Missing (filtered) dependency: cMap2data
EGSEA_1.34.0 Missing (filtered) dependency: EGSEAdata
ELMER_2.30.0 Missing (filtered) dependency: ELMER.data
EWCE_1.14.0 Missing (filtered) dependency: ewceData
EpiMix_1.8.0 Missing (filtered) dependency: ELMER.data
EpiMix_1.8.0 Missing (filtered) dependency: EpiMix.data
EpipwR_1.0.0 Missing (filtered) dependency: EpipwR.data
FlowSOM_2.14.0 Missing (filtered) dependency: ConsensusClusterPlus
GSEABenchmarkeR_1.26.0 Missing (filtered) dependency: KEGGandMetacoreDzPathwaysGEO
GSEABenchmarkeR_1.26.0 Missing (filtered) dependency: KEGGdzPathwaysGEO
GeDi_1.2.0 Missing (filtered) dependency: GeneTonic
GeneTonic_3.0.0 Missing (filtered) dependency: mosdef
ITALICS_2.66.0 Missing (filtered) dependency: ITALICSData
KEGGlincs_1.32.0 Missing (filtered) dependency: KOdata
LiquidAssociation_1.60.0 Missing (filtered) dependency: yeastCC
MAGAR_1.14.0 Missing (filtered) dependency: RnBeads.hg19
MAGAR_1.14.0 Missing (filtered) dependency: RnBeads.hg38
MAGeCKFlute_2.9.0 Missing (filtered) dependency: depmap
MetaCyto_1.28.0 Missing (filtered) dependency: FlowSOM
MetaLonDA_1.1.8 Missing (filtered) dependency: metagenomeSeq
MetaScope_1.5.4-3.20 Missing (filtered) dependency: taxize
Moonlight2R_1.4.0 Missing (filtered) dependency: EpiMix
MoonlightR_1.32.0 Missing (filtered) dependency: TCGAbiolinks
NetActivity_1.8.0 Missing (filtered) dependency: NetActivityData
NetActivity_1.8.0 Missing (filtered) dependency: airway
OMICsPCA_1.24.0 Missing (filtered) dependency: OMICsPCAdata
PADOG_1.48.0 Missing (filtered) dependency: KEGGdzPathwaysGEO
PCRA_1.2 Missing (filtered) dependency: PortfolioAnalytics
PPInfer_1.32.0 Missing (filtered) dependency: yeastExpData
PortfolioAnalytics_2.0.0 Missing (filtered) dependency: ROI.plugin.symphony
PortfolioOptim_1.1.1 Missing (filtered) dependency: Rsymphony
Prostar_1.38.0 Missing (filtered) dependency: DAPAR
Prostar_1.38.0 Missing (filtered) dependency: DAPARdata
RFclust_0.1.2 Missing (filtered) dependency: ConsensusClusterPlus
RGN_1.0.0 Manually excluded. Reason Cannot open module file 'constantsmod.mod' for reading at (1): No such file or directory
RITAN_1.30.0 Missing (filtered) dependency: RITANdata
RNAinteractMAPK_1.41.0-3.20 Missing (filtered) dependency: RNAinteract
ROI.plugin.cplex_0.3-0 Missing (filtered) dependency: Rcplex
ROI.plugin.symphony_1.0-0 Missing (filtered) dependency: Rsymphony
ROracle_1.3-1.1 Manually excluded. Reason oracle oci not in nixpkgs, unfree
RQuantLib_0.4.24 Manually excluded. Reason not in nixpkgs
RUVcorr_1.38.0 Missing (filtered) dependency: bladderbatch
RUVnormalize_1.40.0 Missing (filtered) dependency: RUVnormalizeData
RVA_0.0.5 Missing (filtered) dependency: GSVAdata
Rblpapi_0.3.15 Manually excluded. Reason bloomberg, unfree
Rcplex_0.3-6 Manually excluded. Reason unfree
Rmmquant_1.24.0 Missing (filtered) dependency: TBX20BamSubset
RnaSeqSampleSize_2.16.0 Missing (filtered) dependency: RnaSeqSampleSizeData
Rsymphony_0.1-33 Manually excluded. Reason can't find SYMPHONY in nixpkgs
SBGNview_1.20.0 Missing (filtered) dependency: SBGNview.data
SMITE_1.34.0 Missing (filtered) dependency: geneLenDataBase
SNAGEE_1.46.0 Missing (filtered) dependency: SNAGEEdata
SpliceWiz_1.8.0 Missing (filtered) dependency: NxtIRFdata
Statial_1.8.0 Missing (filtered) dependency: treekoR
TCGAbiolinks_2.34.0 Missing (filtered) dependency: TCGAbiolinksGUI.data
TDbasedUFE_1.6.0 Missing (filtered) dependency: MOFAdata
TDbasedUFE_1.6.0 Missing (filtered) dependency: tximportData
TDbasedUFEadv_1.6.0 Missing (filtered) dependency: TDbasedUFE
adductomicsR_1.22.0 Missing (filtered) dependency: adductData
adea_1.5.1 Missing (filtered) dependency: ROI.plugin.symphony
affyContam_1.64.0 Missing (filtered) dependency: affydata
appreci8R_1.24.0 Missing (filtered) dependency: COSMIC.67
arrayMvout_1.64.0 Missing (filtered) dependency: affyContam
biscuiteer_1.20.0 Missing (filtered) dependency: biscuiteerData
bitmexr_0.3.3 Manually excluded. Reason crypto, requires internet to build.
breakpointR_1.24.0 Missing (filtered) dependency: breakpointRdata
ccmap_1.32.0 Missing (filtered) dependency: ccdata
ccml_1.4.0 Missing (filtered) dependency: ConsensusClusterPlus
censcyt_1.14.0 Missing (filtered) dependency: diffcyt
cfTools_1.6.0 Missing (filtered) dependency: cfToolsData
chipenrich_2.30.0 Missing (filtered) dependency: chipenrich.data
cicero_1.24.0 Missing (filtered) dependency: monocle
consensusDE_1.24.0 Missing (filtered) dependency: airway
cosmiq_1.40.0 Missing (filtered) dependency: faahKO
cosmosR_1.14.0 Missing (filtered) dependency: dorothea
crisprDesign_1.8.0 Missing (filtered) dependency: crisprScore
crisprScore_1.10.0 Manually excluded. Reason loads crisprScoreData on build, which needs experimenthub
crisprScore_1.10.0 Missing (filtered) dependency: crisprScoreData
crisprShiny_1.2.0 Missing (filtered) dependency: crisprDesign
crisprShiny_1.2.0 Missing (filtered) dependency: crisprScore
crisprVerse_1.8.0 Missing (filtered) dependency: crisprDesign
crisprVerse_1.8.0 Missing (filtered) dependency: crisprScore
crisprVerse_1.8.0 Missing (filtered) dependency: crisprScoreData
crisprViz_1.8.0 Missing (filtered) dependency: crisprDesign
crumble_0.1.0 Missing (filtered) dependency: Rsymphony
cytofQC_1.6.0 Missing (filtered) dependency: CATALYST
dGAselID_1.2 Missing (filtered) dependency: ALL
diffcyt_1.26.0 Missing (filtered) dependency: FlowSOM
easier_1.12.0 Missing (filtered) dependency: dorothea
easier_1.12.0 Missing (filtered) dependency: easierData
epimutacions_1.10.0 Missing (filtered) dependency: epimutacionsData
epiregulon_1.2.0 Missing (filtered) dependency: scMultiome
etec16s_1.33.0-3.20 Missing (filtered) dependency: metagenomeSeq
facmodTS_1.0 Missing (filtered) dependency: PortfolioAnalytics
fastLiquidAssociation_1.42.0 Missing (filtered) dependency: LiquidAssociation
filters_0.3.1 Manually excluded. Reason Error: target must be a character vector containing no NA values.
flagme_1.62.0 Missing (filtered) dependency: gcspikelite
foreSIGHT_1.2.0 Missing (filtered) dependency: RGN
ggpicrust2_1.7.3 Missing (filtered) dependency: Maaslin2
ggpicrust2_1.7.3 Missing (filtered) dependency: metagenomeSeq
goseq_1.58.0 Missing (filtered) dependency: geneLenDataBase
gsean_1.26.0 Missing (filtered) dependency: PPInfer
h5vc_2.40.0 Missing (filtered) dependency: h5vcData
happign_0.3.1 Missing (filtered) dependency: yyjsonr
iSubGen_1.0.1 Missing (filtered) dependency: ConsensusClusterPlus
ibh_1.54.0 Missing (filtered) dependency: simpIntLists
ideal_2.0.0 Missing (filtered) dependency: goseq
isomiRs_1.34.0 Missing (filtered) dependency: DEGreport
knowYourCG_1.2.0 Missing (filtered) dependency: sesameData
lmdme_1.48.0 Missing (filtered) dependency: stemHypoxia
longmixr_1.0.0 Missing (filtered) dependency: ConsensusClusterPlus
maPredictDSC_1.44.0 Missing (filtered) dependency: LungCancerACvsSCCGEO
methyLImp2_1.2.0 Missing (filtered) dependency: ChAMPdata
methylCC_1.20.0 Missing (filtered) dependency: FlowSorted.Blood.450k
methylclock_1.12.0 Missing (filtered) dependency: methylclockData
miRLAB_1.36.0 Missing (filtered) dependency: TCGAbiolinks
miRcomp_1.36.0 Missing (filtered) dependency: miRcompData
monocle_2.34.0 Missing (filtered) dependency: HSMMSingleCell
mosdef_1.2.0 Missing (filtered) dependency: goseq
msd16s_1.25.0-3.20 Missing (filtered) dependency: metagenomeSeq
neatmaps_2.1.0 Missing (filtered) dependency: ConsensusClusterPlus
octad_1.8.0 Missing (filtered) dependency: octad.db
oncoPredict_1.2 Missing (filtered) dependency: TCGAbiolinks
optimalFlow_1.18.0 Missing (filtered) dependency: optimalFlowData
orthos_1.4.0 Missing (filtered) dependency: orthosData
pcaExplorer_3.0.0 Missing (filtered) dependency: mosdef
rcellminer_2.28.0 Missing (filtered) dependency: rcellminerData
rgsepd_1.38.0 Missing (filtered) dependency: goseq
scRNAtools_1.0 Missing (filtered) dependency: ALL
scanMiRApp_1.12.0 Missing (filtered) dependency: scanMiRData
seq2pathway_1.38.0 Missing (filtered) dependency: seq2pathway.data
sesame_1.24.0 Missing (filtered) dependency: sesameData
singleCellTK_2.16.0 Missing (filtered) dependency: GSVAdata
singleCellTK_2.16.0 Missing (filtered) dependency: TENxPBMCData
singleCellTK_2.16.0 Missing (filtered) dependency: celldex
singleCellTK_2.16.0 Missing (filtered) dependency: scRNAseq
spillR_1.2.0 Missing (filtered) dependency: CATALYST
splineTimeR_1.34.0 Missing (filtered) dependency: FIs
surveyvoi_1.0.6 Missing (filtered) dependency: Rsymphony
switchr_0.14.8 Manually excluded. Reason R package managment (not necessary on Nix). Cannot open the connection to 'http://bioconductor.org/config.yaml'
treeclimbR_1.2.0 Missing (filtered) dependency: diffcyt
treekoR_1.14.0 Missing (filtered) dependency: diffcyt
uSORT_1.32.0 Missing (filtered) dependency: monocle
yyjsonr_0.1.20 Manually excluded. Reason Cant find lz