From 53a647bef6d1c522192a8b02442aa3bed615d190 Mon Sep 17 00:00:00 2001 From: Gabriele Bozzola Date: Thu, 28 Oct 2021 15:16:57 -0700 Subject: [PATCH] Bump to 1.3.0 --- docs/conf.py | 2 +- kuibit/__init__.py | 2 +- poetry.lock | 936 ++++++++++++++++++++++++------------------- pyproject.toml | 7 +- tests/test_kuibit.py | 2 +- 5 files changed, 522 insertions(+), 427 deletions(-) diff --git a/docs/conf.py b/docs/conf.py index eca15b0f..ed12b83c 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -23,7 +23,7 @@ author = 'Gabriele Bozzola' # The full version, including alpha/beta/rc tags -release = '1.3.0-alpha2' +release = '1.3.0' # -- General configuration --------------------------------------------------- diff --git a/kuibit/__init__.py b/kuibit/__init__.py index 37b71bc4..6d79feab 100755 --- a/kuibit/__init__.py +++ b/kuibit/__init__.py @@ -20,7 +20,7 @@ """ -__version__ = "1.3.0-alpha2" +__version__ = "1.3.0" __bibtex__ = """\ @article{kuibit, diff --git a/poetry.lock b/poetry.lock index 35c368f8..80e9861f 100644 --- a/poetry.lock +++ b/poetry.lock @@ -246,17 +246,9 @@ packaging = "*" six = ">=1.9.0" webencodings = "*" -[[package]] -name = "cached-property" -version = "1.5.2" -description = "A decorator for caching properties in classes." -category = "main" -optional = false -python-versions = "*" - [[package]] name = "certifi" -version = "2021.5.30" +version = "2021.10.8" description = "Python package for providing Mozilla's CA Bundle." category = "main" optional = false @@ -264,7 +256,7 @@ python-versions = "*" [[package]] name = "cffi" -version = "1.14.6" +version = "1.15.0" description = "Foreign Function Interface for Python calling C code." category = "main" optional = false @@ -283,7 +275,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] name = "charset-normalizer" -version = "2.0.5" +version = "2.0.7" description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet." category = "main" optional = false @@ -294,7 +286,7 @@ unicode_backport = ["unicodedata2"] [[package]] name = "click" -version = "8.0.1" +version = "8.0.3" description = "Composable command line interface toolkit" category = "dev" optional = false @@ -314,7 +306,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] name = "configargparse" -version = "1.5.2" +version = "1.5.3" description = "A drop-in replacement for argparse that allows options to also be set via config files and/or environment variables." category = "main" optional = false @@ -356,7 +348,7 @@ toml = ["toml"] [[package]] name = "cryptography" -version = "3.4.8" +version = "35.0.0" description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers." category = "main" optional = false @@ -369,9 +361,9 @@ cffi = ">=1.12" docs = ["sphinx (>=1.6.5,!=1.8.0,!=3.1.0,!=3.1.1)", "sphinx-rtd-theme"] docstest = ["doc8", "pyenchant (>=1.6.11)", "twine (>=1.12.0)", "sphinxcontrib-spelling (>=4.0.1)"] pep8test = ["black", "flake8", "flake8-import-order", "pep8-naming"] -sdist = ["setuptools-rust (>=0.11.4)"] +sdist = ["setuptools_rust (>=0.11.4)"] ssh = ["bcrypt (>=3.1.5)"] -test = ["pytest (>=6.0)", "pytest-cov", "pytest-subtests", "pytest-xdist", "pretend", "iso8601", "pytz", "hypothesis (>=1.11.4,!=3.79.2)"] +test = ["pytest (>=6.2.0)", "pytest-cov", "pytest-subtests", "pytest-xdist", "pretend", "iso8601", "pytz", "hypothesis (>=1.11.4,!=3.79.2)"] [[package]] name = "cycler" @@ -501,20 +493,15 @@ six = "*" [[package]] name = "h5py" -version = "3.1.0" +version = "2.10.0" description = "Read and write HDF5 files from Python" category = "main" optional = false -python-versions = ">=3.6" +python-versions = "*" [package.dependencies] -cached-property = {version = "*", markers = "python_version < \"3.8\""} -numpy = [ - {version = ">=1.12", markers = "python_version == \"3.6\""}, - {version = ">=1.14.5", markers = "python_version == \"3.7\""}, - {version = ">=1.17.5", markers = "python_version == \"3.8\""}, - {version = ">=1.19.3", markers = "python_version >= \"3.9\""}, -] +numpy = ">=1.7" +six = "*" [[package]] name = "hyperlink" @@ -529,7 +516,7 @@ idna = ">=2.5" [[package]] name = "idna" -version = "3.2" +version = "3.3" description = "Internationalized Domain Names in Applications (IDNA)" category = "main" optional = false @@ -573,7 +560,7 @@ testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytes [[package]] name = "importlib-resources" -version = "5.2.2" +version = "5.3.0" description = "Read resources from Python packages" category = "main" optional = false @@ -584,7 +571,7 @@ zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""} [package.extras] docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"] -testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "pytest-black (>=0.3.7)", "pytest-mypy"] +testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "pytest-black (>=0.3.7)", "pytest-mypy"] [[package]] name = "incremental" @@ -599,7 +586,7 @@ scripts = ["click (>=6.0)", "twisted (>=16.4.0)"] [[package]] name = "ipykernel" -version = "5.5.5" +version = "5.5.6" description = "IPython Kernel for Jupyter" category = "dev" optional = false @@ -608,6 +595,7 @@ python-versions = ">=3.5" [package.dependencies] appnope = {version = "*", markers = "platform_system == \"Darwin\""} ipython = ">=5.0.0" +ipython-genutils = "*" jupyter-client = "*" tornado = ">=4.2" traitlets = ">=4.1.0" @@ -705,7 +693,7 @@ testing = ["Django (<3.1)", "colorama", "docopt", "pytest (>=3.9.0,<5.0.0)"] [[package]] name = "jinja2" -version = "3.0.1" +version = "3.0.2" description = "A very fast and expressive template engine." category = "main" optional = false @@ -719,7 +707,7 @@ i18n = ["Babel (>=2.7)"] [[package]] name = "jsonschema" -version = "3.2.0" +version = "4.0.0" description = "An implementation of JSON Schema validation for Python" category = "dev" optional = false @@ -728,12 +716,11 @@ python-versions = "*" [package.dependencies] attrs = ">=17.4.0" importlib-metadata = {version = "*", markers = "python_version < \"3.8\""} -pyrsistent = ">=0.14.0" -six = ">=1.11.0" +pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2" [package.extras] -format = ["idna", "jsonpointer (>1.13)", "rfc3987", "strict-rfc3339", "webcolors"] -format_nongpl = ["idna", "jsonpointer (>1.13)", "webcolors", "rfc3986-validator (>0.1.0)", "rfc3339-validator"] +format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"] +format_nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"] [[package]] name = "jupyter" @@ -753,7 +740,7 @@ qtconsole = "*" [[package]] name = "jupyter-client" -version = "7.0.2" +version = "7.0.6" description = "Jupyter protocol implementation and client libraries" category = "dev" optional = false @@ -792,14 +779,14 @@ test = ["pexpect"] [[package]] name = "jupyter-core" -version = "4.7.1" +version = "4.9.1" description = "Jupyter core package. A base package on which Jupyter projects rely." category = "dev" optional = false python-versions = ">=3.6" [package.dependencies] -pywin32 = {version = ">=1.0", markers = "sys_platform == \"win32\""} +pywin32 = {version = ">=1.0", markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\""} traitlets = "*" [[package]] @@ -851,7 +838,7 @@ lalinference = ["gwpy", "gwdatafind"] [[package]] name = "ligo-segments" -version = "1.3.0" +version = "1.4.0" description = "Representations of semi-open intervals" category = "main" optional = true @@ -985,7 +972,7 @@ matplotlib = "*" [[package]] name = "multidict" -version = "5.1.0" +version = "5.2.0" description = "multidict implementation" category = "dev" optional = false @@ -1093,7 +1080,7 @@ python-versions = ">=3.5" [[package]] name = "notebook" -version = "6.4.4" +version = "6.4.5" description = "A web-based notebook environment for interactive computing" category = "dev" optional = false @@ -1199,7 +1186,7 @@ python-versions = "*" [[package]] name = "pillow" -version = "8.3.2" +version = "8.4.0" description = "Python Imaging Library (Fork)" category = "main" optional = false @@ -1340,14 +1327,14 @@ python-versions = ">=3.5" [[package]] name = "pyopenssl" -version = "20.0.1" +version = "21.0.0" description = "Python wrapper module around the OpenSSL library" category = "main" optional = true -python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*" +python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*" [package.dependencies] -cryptography = ">=3.2" +cryptography = ">=3.3" six = ">=1.5.2" [package.extras] @@ -1356,11 +1343,14 @@ test = ["flaky", "pretend", "pytest (>=3.0.1)"] [[package]] name = "pyparsing" -version = "2.4.7" +version = "3.0.3" description = "Python parsing module" category = "main" optional = false -python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" +python-versions = ">=3.6" + +[package.extras] +diagrams = ["jinja2", "railroad-diagrams"] [[package]] name = "pyrsistent" @@ -1383,7 +1373,7 @@ six = ">=1.5" [[package]] name = "pytz" -version = "2021.1" +version = "2021.3" description = "World timezone definitions, modern and historical" category = "dev" optional = false @@ -1391,7 +1381,7 @@ python-versions = "*" [[package]] name = "pywin32" -version = "301" +version = "302" description = "Python for Window Extensions" category = "dev" optional = false @@ -1399,7 +1389,7 @@ python-versions = "*" [[package]] name = "pywinpty" -version = "1.1.4" +version = "1.1.5" description = "Pseudo terminal support for Windows from Python." category = "dev" optional = false @@ -1407,7 +1397,7 @@ python-versions = ">=3.6" [[package]] name = "pyzmq" -version = "22.2.1" +version = "22.3.0" description = "Python bindings for 0MQ" category = "dev" optional = false @@ -1441,7 +1431,7 @@ test = ["flaky", "pytest", "pytest-qt"] [[package]] name = "qtpy" -version = "1.11.1" +version = "1.11.2" description = "Provides an abstraction layer on top of the various Qt bindings (PyQt5, PyQt4 and PySide) and additional custom QWidgets." category = "dev" optional = false @@ -1449,7 +1439,7 @@ python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*" [[package]] name = "regex" -version = "2021.8.28" +version = "2021.10.23" description = "Alternative regular expression module, to replace re." category = "dev" optional = false @@ -1507,7 +1497,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*" [[package]] name = "snakeviz" -version = "2.1.0" +version = "2.1.1" description = "A web-based viewer for Python profiler output" category = "dev" optional = false @@ -1693,7 +1683,7 @@ python-versions = ">= 3.5" [[package]] name = "tqdm" -version = "4.62.2" +version = "4.62.3" description = "Fast, Extensible Progress Meter" category = "main" optional = false @@ -1725,7 +1715,7 @@ test = ["pytest", "mock"] [[package]] name = "traits" -version = "6.2.0" +version = "6.3.1" description = "Observable typed attributes for Python classes" category = "dev" optional = false @@ -1734,7 +1724,7 @@ python-versions = ">=3.6" [package.extras] docs = ["enthought-sphinx-theme", "Sphinx (>=2.1.0,!=3.2.0)"] examples = ["numpy", "pillow"] -test = ["cython", "flake8", "flake8-ets", "mypy", "numpy", "pyface", "pyside2", "setuptools", "Sphinx (>=2.1.0,!=3.2.0)", "traitsui"] +test = ["cython", "flake8", "flake8-ets", "mypy", "pyface", "setuptools", "Sphinx (>=2.1.0,!=3.2.0)", "traitsui", "numpy", "pyside2"] [[package]] name = "traitsui" @@ -1828,7 +1818,7 @@ python-versions = "*" [[package]] name = "urllib3" -version = "1.26.6" +version = "1.26.7" description = "HTTP library with thread-safe connection pooling, file post, and more." category = "main" optional = false @@ -1874,7 +1864,7 @@ python-versions = "*" [[package]] name = "widgetsnbextension" -version = "3.5.1" +version = "3.5.2" description = "IPython HTML widgets for Jupyter" category = "dev" optional = false @@ -1885,7 +1875,7 @@ notebook = ">=4.4.1" [[package]] name 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simulations." authors = ["Gabriele Bozzola "] maintainers = ["Gabriele Bozzola "] @@ -17,7 +17,7 @@ documentation = "https://sbozzolo.github.io/kuibit" python = "^3.6.1" numpy = "^1.18.5" scipy = "^1.5.2" -h5py = ">=2.9.0" +h5py = "^2.9.0" numba = { version = "^0.53.1", optional = true, python = ">=3.6, <3.10"} lalsuite = { version = "^6.77", optional = true } pycbc = { version = "^1.16.10", optional = true } @@ -25,7 +25,8 @@ ConfigArgParse = "^1.2.3" matplotlib = "^3.3.2" motionpicture = "^0.2.0" argcomplete = "^1.12.3" -tikzplotlib = "^0.9.6" +# tikzplotlib >=0.9.13 requires python3.7 +tikzplotlib = "<0.9.13" py-expression-eval = "^0.3.14" [tool.poetry.dev-dependencies] diff --git a/tests/test_kuibit.py b/tests/test_kuibit.py index 6a7a3107..0bd2fb5d 100755 --- a/tests/test_kuibit.py +++ b/tests/test_kuibit.py @@ -22,7 +22,7 @@ class Testkuibit(unittest.TestCase): def test_version(self): - self.assertEqual(__version__, "1.3.0-alpha2") + self.assertEqual(__version__, "1.3.0") def test_bibtex(self): self.assertIn("Bozzola", __bibtex__)