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Add appendix updates
Appendix updates
Add appendix items 2.1 and 2.2
Updated Setup and Configuration (markdown)
Updated Output Files (markdown)
Updated Definition Files (markdown)
Update group description
Fix table widths
Updated Computing Environment (markdown)
Updated Input Files (markdown)
Updated Run the Model (markdown)
Updated Scenario Directory (markdown)
Updated Build Model (markdown)
Updated _Sidebar (markdown)