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MMGC - Practical session 01 - “Biodiversity facets in macro-space”

This the first practical session in the course “Macroecology and Macroevolution under Global Change”. This practical session is going to be linked to lectures 2 and 3 on biodiversity facets.

Year: 2021

Instructors: Matthias Grenié & Marten Winter

Contact us via Slack or email for any further questions.

Goals

  • Manipulate research open data
  • Learning how to compute functional diversity indices with fundiversity
  • Learning how to compute phylogenetic diversity indices with ape
  • Know the difference between facets of functional and phylogenetic diversity indices
  • Visualize biodiversity facets on the map
  • Show the effect of logging in a tropical forest context on some biodiversity facets

How to use it?

Visualizing the tutorial. githubhtmlpreview

Downloading the data

Cloning the repo to get the do

Data provenance

Going Further

Other courses on biodiversity facets and potential interesting papers:

  • The FD package is the reference package to compute functional diversity indices.

License

CC-BY