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CLI plan #3

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tsalo opened this issue Oct 7, 2024 · 0 comments

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tsalo commented Oct 7, 2024 •

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smripost-linc in out participant \
    --datasets <path1> <path2> \
    --atlases <label1> <label2>

Anything else we want users to be able to control?

Should sMRIPrep derivatives be the primary input, or Freesurfer derivatives?

Do we want a separate argument for the Freesurfer directory or should we just put that in --datasets?

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