download dicoms

Author: singlesp

curation/download_dcms/download_dcms.sh

@@ -0,0 +1,11 @@
+#!/bin/bash
+#SBATCH --nodes=1
+#SBATCH --ntasks=1
+#SBATCH --cpus-per-task=4
+#SBATCH --mem=16G
+#SBATCH --time=48:00:00
+#SBATCH --output=/cbica/projects/grmpy/data/bids/code/download_dcms/logs/download_dcms-%A.out
+#SBATCH --error=/cbica/projects/grmpy/data/bids/code/download_dcms/logs/download_dcms-%A.err
+
+unset LD_LIBRARY_PATH
+/cbica/projects/grmpy/glibc-2.34/lib/ld-linux-x86-64.so.2 /cbica/projects/grmpy/linux_amd64/fw sync -m --include dicom fw://bbl/GRMPY_822831 /cbica/projects/grmpy/data/bids/sourcedata/