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R-CMD-check

R-CMD-check #16

Triggered via schedule July 19, 2024 08:05
Status Failure
Total duration 6m 55s
Artifacts 3

R-CMD-check.yaml

on: schedule
Matrix: R-CMD-check
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8 errors and 18 warnings
macOS-12 (devel)
Running examples in ‘peakCombiner-Ex.R’ failed
macOS-12 (devel)
object 'infolder' not found
macOS-12 (devel)
Process completed with exit code 1.
macOS-12 (devel)
Process completed with exit code 1.
windows-latest (devel)
Running examples in 'peakCombiner-Ex.R' failed
windows-latest (devel)
object 'infolder' not found
windows-latest (devel)
Process completed with exit code 1.
windows-latest (devel)
Process completed with exit code 1.
macOS-12 (devel)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-12 (devel)
ghostscript 10.03.1 is already installed and up-to-date. To reinstall 10.03.1, run: brew reinstall ghostscript
macOS-12 (devel)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-12 (devel)
Invalid citation information in ‘inst/CITATION’:
macOS-12 (devel)
'::' or ':::' imports not declared from:
macOS-12 (devel)
checkRd: (3) blacklist_hg38.Rd:8-9: Empty section ‘\code{blacklist_hg38} A tibble with 910 rows and 3 columns:’
macOS-12 (devel)
Missing link or links in Rd file 'check_data_structure.Rd':
macOS-12 (devel)
Undocumented arguments in Rd file 'cr_add_summit.Rd'
macOS-12 (devel)
'::' or ':::' import not declared from: ‘dplyr’
macOS-12 (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "install-log". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
windows-latest (devel)
Invalid citation information in 'inst/CITATION':
windows-latest (devel)
'::' or ':::' imports not declared from:
windows-latest (devel)
checkRd: (3) blacklist_hg38.Rd:8-9: Empty section '\code{blacklist_hg38} A tibble with 910 rows and 3 columns:'
windows-latest (devel)
Missing link or links in Rd file 'check_data_structure.Rd':
windows-latest (devel)
Undocumented arguments in Rd file 'cr_add_summit.Rd'
windows-latest (devel)
'::' or ':::' import not declared from: 'dplyr'
windows-latest (devel)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

Artifacts

Produced during runtime
Name Size
Windows-results Expired
621 KB
install-log Expired
536 Bytes
macOS-results Expired
635 KB