CLI creates workspace structure outside of workspace directory

[theblackapple5150]

Issue:
When using the CLI, the workspace structure is created
outside of the intended workspace/ directory.

Expected:
All generated workspace content should be created under:
workspace/<flow_name>/

Current Behavior:

• Files/folders may be created under the root folder location
• Causes inconsistent project structure

Impact:

• Breaks expected workspace organization
• Makes cleanup and navigation harder

Notes:
Likely related to path handling or working directory assumptions in CLI execution.