diff --git a/README.md b/README.md index 051db1bd..1d1f09a9 100644 --- a/README.md +++ b/README.md @@ -21,6 +21,34 @@ This is an easy-to-use tutorial for accessing EVSRESTAPI APIs. - [Click for Python examples.](../master/python-examples/ "Python Examples") - [Click for Swagger API documentation](https://api-evsrest.nci.nih.gov/swagger-ui/index.html) +## Automation scripts for examples + +A set of convenience scripts is provided in some of the example directories to help you run the example collections/tests and capture outputs quickly. These scripts are optional helpers and use the examples' local files and tooling. + +- `postman-examples/postman.sh` — Runs the Postman collection via Newman. Example: + ```bash + cd postman-examples + ./postman.sh + ``` +- `fhir-examples/postman_fhir.sh` — Runs the FHIR collections (R4 or R5) via Newman. Example: + ```bash + cd fhir-examples + ./postman_fhir.sh R4 + ``` + You can override the API URL used by these Postman scripts by setting the `API_URL` environment variable before running them. +- `python-examples/python_check.py` — Scans `python-examples/README.md` for backticked pytest commands and runs them using your Python environment. Example: + ```bash + cd python-examples + python python_check.py + ``` +- `java-examples/java_check.py` — Scans `java-examples/README.md` for `./gradlew` commands, executes them, and writes captured outputs to the `samples/` folder. Example: + ```bash + cd java-examples + python java_check.py + ``` + +Requirements: `newman` (npm) for Postman scripts; `pytest` (pip) for the Python helper; Java (JDK) and a working `./gradlew` (Gradle wrapper) for the Java helper. + **[Back to top](#table-of-contents)** ## Use Cases diff --git a/bash-examples/get-inactive-replacements.sh b/bash-examples/get-inactive-replacements.sh old mode 100644 new mode 100755 diff --git a/bash-examples/get-mapsets.sh b/bash-examples/get-mapsets.sh old mode 100644 new mode 100755 diff --git a/bash-examples/samples/find-concepts.txt b/bash-examples/samples/find-concepts.txt index ad3fc139..dad3cc82 100644 --- a/bash-examples/samples/find-concepts.txt +++ b/bash-examples/samples/find-concepts.txt @@ -1,121 +1,121 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:22 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -term = malignant -include = - - Find concepts for ncit malignant: - - { - "total": 4676, - "timeTaken": 70, - "parameters": { - "term": "malignant", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 10, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C14143", - "name": "Malignant", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C7612", - "name": "Malignant Thymoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C9305", - "name": "Malignant Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C121792", - "name": "Malignant PEComa", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C65189", - "name": "Malignant Vipoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C19436", - "name": "Malignant Conversion", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C36942", - "name": "Malignant Oncocyte", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C4456", - "name": "Malignant Mesothelioma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C65191", - "name": "Malignant Enteroglucagonoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "Obsolete_Concept", - "leaf": true, - "active": true - }, - { - "code": "C8991", - "name": "Malignant Mastocytosis", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:22 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:28:58 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +term = malignant +include = + + Find concepts for ncit malignant: + + { + "total": 4778, + "timeTaken": 53, + "parameters": { + "term": "malignant", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 10, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C14143", + "name": "Malignant", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C19436", + "name": "Malignant Conversion", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C36942", + "name": "Malignant Oncocyte", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C4456", + "name": "Malignant Mesothelioma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C65191", + "name": "Malignant Enteroglucagonoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "Obsolete_Concept", + "leaf": true, + "active": true + }, + { + "code": "C8991", + "name": "Malignant Mastocytosis", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C65190", + "name": "Malignant Somatostatinoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7612", + "name": "Malignant Thymoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C9305", + "name": "Malignant Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C121792", + "name": "Malignant PEComa", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:28:59 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-association-from-code.txt b/bash-examples/samples/get-association-from-code.txt index 5846ef6c..f015b477 100644 --- a/bash-examples/samples/get-association-from-code.txt +++ b/bash-examples/samples/get-association-from-code.txt @@ -1,21 +1,21 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:30 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = A16 -include = - - Get association for ncit A16: - - { - "code": "A16", - "name": "Has_INC_Parent", - "terminology": "ncit", - "version": "25.02d" - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:30 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:06 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = A16 +include = + + Get association for ncit A16: + + { + "code": "A16", + "name": "Has_INC_Parent", + "terminology": "ncit", + "version": "25.07d" + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:06 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-association-with-label.txt b/bash-examples/samples/get-association-with-label.txt index e73e6e4e..2626f6ce 100644 --- a/bash-examples/samples/get-association-with-label.txt +++ b/bash-examples/samples/get-association-with-label.txt @@ -1,35 +1,35 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:30 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = Role_Has_Domain -include = synonyms - - Get association for ncit Role_Has_Domain: - - { - "code": "A1", - "name": "Role_Has_Domain", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Domain", - "type": "Display_Name" - }, - { - "name": "Role_Has_Domain", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Domain", - "type": "Preferred_Name" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:31 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:07 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = Role_Has_Domain +include = synonyms + + Get association for ncit Role_Has_Domain: + + { + "code": "A1", + "name": "Role_Has_Domain", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Domain", + "type": "Display_Name" + }, + { + "name": "Role_Has_Domain", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Domain", + "type": "Preferred_Name" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:07 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-associations.txt b/bash-examples/samples/get-associations.txt index 71da507b..38f01248 100644 --- a/bash-examples/samples/get-associations.txt +++ b/bash-examples/samples/get-associations.txt @@ -1,293 +1,293 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:29 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = -include = - - Get associations for ncit: - - [ - { - "code": "A1", - "name": "Role_Has_Domain", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A12", - "name": "Has_Data_Element", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A13", - "name": "Related_To_Genetic_Biomarker", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A14", - "name": "Neoplasm_Has_Special_Category", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A15", - "name": "Has_CTCAE_5_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A16", - "name": "Has_INC_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A17", - "name": "Has_Pharmaceutical_State_Of_Matter", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A18", - "name": "Has_Pharmaceutical_Basic_Dose_Form", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A19", - "name": "Has_Pharmaceutical_Administration_Method", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A2", - "name": "Role_Has_Range", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A20", - "name": "Has_Pharmaceutical_Intended_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A21", - "name": "Has_Pharmaceutical_Release_Characteristics", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A22", - "name": "Has_Pharmaceutical_Transformation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A23", - "name": "Has_PCDC_Data_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A24", - "name": "Is_PCDC_AML_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A25", - "name": "Value_Set_Is_Paired_With", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A26", - "name": "Has_PCDC_AML_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A27", - "name": "Has_CTDC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A28", - "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A29", - "name": "Has_PCDC_EWS_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A3", - "name": "Role_Has_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A30", - "name": "Has_ICDC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A31", - "name": "Has_GDC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A32", - "name": "Is_Value_For_GDC_Property", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A33", - "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A34", - "name": "Has_PCDC_GCT_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A35", - "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A36", - "name": "Has_PCDC_ALL_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A37", - "name": "Has_SeroNet_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A38", - "name": "Has_PCDC_OS_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A39", - "name": "Has_PCDC_HL_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A4", - "name": "Qualifier_Applies_To", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A40", - "name": "Has_DIPG_DMG_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A5", - "name": "Has_Salt_Form", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A6", - "name": "Has_Free_Acid_Or_Base_Form", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A7", - "name": "Has_Target", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A8", - "name": "Concept_In_Subset", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A9", - "name": "Is_Related_To_Endogenous_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A42", - "name": "Has_OORO_PC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A48", - "name": "Has_ACC-AHA_SARS2_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A49", - "name": "Has_PRO-CTCAE_Attribute", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A50", - "name": "Has_Ped-PRO-CTCAE_Attribute", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A51", - "name": "Has_PRO-CTCAE_Attribute_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A52", - "name": "Has_Ped-PRO-CTCAE_Attribute_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A53", - "name": "Has_PRO-CTCAE_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A54", - "name": "Has_Ped-PRO-CTCAE_Parent", - "terminology": "ncit", - "version": "25.02d" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:30 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:05 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = +include = + + Get associations for ncit: + + [ + { + "code": "A1", + "name": "Role_Has_Domain", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A12", + "name": "Has_Data_Element", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A13", + "name": "Related_To_Genetic_Biomarker", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A14", + "name": "Neoplasm_Has_Special_Category", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A15", + "name": "Has_CTCAE_5_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A16", + "name": "Has_INC_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A17", + "name": "Has_Pharmaceutical_State_Of_Matter", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A18", + "name": "Has_Pharmaceutical_Basic_Dose_Form", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A19", + "name": "Has_Pharmaceutical_Administration_Method", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A2", + "name": "Role_Has_Range", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A20", + "name": "Has_Pharmaceutical_Intended_Site", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A21", + "name": "Has_Pharmaceutical_Release_Characteristics", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A22", + "name": "Has_Pharmaceutical_Transformation", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A23", + "name": "Has_PCDC_Data_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A24", + "name": "Is_PCDC_AML_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A25", + "name": "Value_Set_Is_Paired_With", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A26", + "name": "Has_PCDC_AML_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A27", + "name": "Has_CTDC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A28", + "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A29", + "name": "Has_PCDC_EWS_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A3", + "name": "Role_Has_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A30", + "name": "Has_ICDC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A31", + "name": "Has_GDC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A32", + "name": "Is_Value_For_GDC_Property", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A33", + "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A34", + "name": "Has_PCDC_GCT_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A35", + "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A36", + "name": "Has_PCDC_ALL_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A37", + "name": "Has_SeroNet_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A38", + "name": "Has_PCDC_OS_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A39", + "name": "Has_PCDC_HL_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A4", + "name": "Qualifier_Applies_To", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A40", + "name": "Has_DIPG_DMG_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A42", + "name": "Has_OORO_PC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A48", + "name": "Has_ACC-AHA_SARS2_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A49", + "name": "Has_PRO-CTCAE_Attribute", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A5", + "name": "Has_Salt_Form", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A50", + "name": "Has_Ped-PRO-CTCAE_Attribute", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A51", + "name": "Has_PRO-CTCAE_Attribute_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A52", + "name": "Has_Ped-PRO-CTCAE_Attribute_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A53", + "name": "Has_PRO-CTCAE_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A54", + "name": "Has_Ped-PRO-CTCAE_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A6", + "name": "Has_Free_Acid_Or_Base_Form", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A7", + "name": "Has_Target", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A8", + "name": "Concept_In_Subset", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A9", + "name": "Is_Related_To_Endogenous_Product", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:06 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-concept-list.txt b/bash-examples/samples/get-concept-list.txt index 860c58f9..f145cc81 100644 --- a/bash-examples/samples/get-concept-list.txt +++ b/bash-examples/samples/get-concept-list.txt @@ -1,35 +1,35 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:20 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224,C3910 -include = minimal - - Get concepts for ncit C3224,C3910: - - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3910", - "name": "Molecular Abnormality", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:21 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:28:57 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224,C3910 +include = minimal + + Get concepts for ncit C3224,C3910: + + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3910", + "name": "Molecular Abnormality", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:28:57 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-concept-part.txt b/bash-examples/samples/get-concept-part.txt index f20207b0..3b39cb59 100644 --- a/bash-examples/samples/get-concept-part.txt +++ b/bash-examples/samples/get-concept-part.txt @@ -1,107 +1,112 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:21 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224 -part = children - - Get children for ncit C3224: - - [ - { - "code": "C3802", - "name": "Amelanotic Melanoma", - "leaf": false - }, - { - "code": "C8410", - "name": "Breast Melanoma", - "leaf": true - }, - { - "code": "C131506", - "name": "Childhood Melanoma", - "leaf": false - }, - { - "code": "C3510", - "name": "Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C4236", - "name": "Epithelioid Cell Melanoma", - "leaf": false - }, - { - "code": "C8925", - "name": "Metastatic Melanoma", - "leaf": false - }, - { - "code": "C66756", - "name": "Mixed Epithelioid and Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C205125", - "name": "Nodular Melanoma", - "leaf": false - }, - { - "code": "C8711", - "name": "Non-Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C8562", - "name": "Ocular Melanoma", - "leaf": false - }, - { - "code": "C118828", - "name": "Orbital Melanoma", - "leaf": true - }, - { - "code": "C162547", - "name": "Penile Melanoma", - "leaf": false - }, - { - "code": "C7087", - "name": "Recurrent Melanoma", - "leaf": false - }, - { - "code": "C147983", - "name": "Refractory Melanoma", - "leaf": false - }, - { - "code": "C4228", - "name": "Regressing Melanoma", - "leaf": false - }, - { - "code": "C190239", - "name": "Resectable Melanoma", - "leaf": false - }, - { - "code": "C4237", - "name": "Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C148517", - "name": "Unresectable Melanoma", - "leaf": false - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:21 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:28:57 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224 +part = children + + Get children for ncit C3224: + + [ + { + "code": "C3802", + "name": "Amelanotic Melanoma", + "leaf": false + }, + { + "code": "C8410", + "name": "Breast Melanoma", + "leaf": true + }, + { + "code": "C131506", + "name": "Childhood Melanoma", + "leaf": false + }, + { + "code": "C3510", + "name": "Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C4236", + "name": "Epithelioid Cell Melanoma", + "leaf": false + }, + { + "code": "C217198", + "name": "Localized Melanoma", + "leaf": false + }, + { + "code": "C215044", + "name": "Melanoma In Situ", + "leaf": false + }, + { + "code": "C8925", + "name": "Metastatic Melanoma", + "leaf": false + }, + { + "code": "C66756", + "name": "Mixed Epithelioid and Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C205125", + "name": "Nodular Melanoma", + "leaf": false + }, + { + "code": "C8711", + "name": "Non-Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C118828", + "name": "Orbital Melanoma", + "leaf": true + }, + { + "code": "C162547", + "name": "Penile Melanoma", + "leaf": false + }, + { + "code": "C7087", + "name": "Recurrent Melanoma", + "leaf": false + }, + { + "code": "C147983", + "name": "Refractory Melanoma", + "leaf": false + }, + { + "code": "C4228", + "name": "Regressing Melanoma", + "leaf": false + }, + { + "code": "C190239", + "name": "Resectable Melanoma", + "leaf": false + }, + { + "code": "C4237", + "name": "Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C148517", + "name": "Unresectable Melanoma", + "leaf": false + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:28:58 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-concept.txt b/bash-examples/samples/get-concept.txt index 980e58bc..38eb8844 100644 --- a/bash-examples/samples/get-concept.txt +++ b/bash-examples/samples/get-concept.txt @@ -1,24 +1,24 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:19 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224 -include = minimal - - Get concept for ncit C3224: - - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:20 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:28:56 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224 +include = minimal + + Get concept for ncit C3224: + + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:28:57 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-definition-type-by-code.txt b/bash-examples/samples/get-definition-type-by-code.txt index 89c4d4d6..264f8e72 100644 --- a/bash-examples/samples/get-definition-type-by-code.txt +++ b/bash-examples/samples/get-definition-type-by-code.txt @@ -1,47 +1,47 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:43 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = P325 -include = summary - - Get definition types for ncit P325: - - { - "code": "P325", - "name": "ALT_DEFINITION", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "[source] Definition", - "type": "Display_Name" - }, - { - "name": "ALT_DEFINITION", - "type": "FULL_SYN" - }, - { - "name": "ALT_DEFINITION", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the English language definition of a concept from a source other than NCI.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:43 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:18 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = P325 +include = summary + + Get definition types for ncit P325: + + { + "code": "P325", + "name": "ALT_DEFINITION", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "[source] Definition", + "type": "Display_Name" + }, + { + "name": "ALT_DEFINITION", + "type": "FULL_SYN" + }, + { + "name": "ALT_DEFINITION", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the English language definition of a concept from a source other than NCI.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:19 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-definition-types.txt b/bash-examples/samples/get-definition-types.txt index 32219e5a..2036cabe 100644 --- a/bash-examples/samples/get-definition-types.txt +++ b/bash-examples/samples/get-definition-types.txt @@ -1,29 +1,29 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:42 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = -include = - - Get definition types for ncit: - - [ - { - "code": "P325", - "name": "ALT_DEFINITION", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P97", - "name": "DEFINITION", - "terminology": "ncit", - "version": "25.02d" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:42 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:17 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = +include = + + Get definition types for ncit: + + [ + { + "code": "P325", + "name": "ALT_DEFINITION", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P97", + "name": "DEFINITION", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:18 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-descendants.txt b/bash-examples/samples/get-descendants.txt index 866d76a7..277ba9e6 100644 --- a/bash-examples/samples/get-descendants.txt +++ b/bash-examples/samples/get-descendants.txt @@ -1,49 +1,49 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:23 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224 -fromRecord = -pageSize = 5 - - Get descendants for ncit C3224: - count = 5 - - [ - { - "code": "C4022", - "name": "Acral Lentiginous Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C204883", - "name": "Acral Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C188185", - "name": "Adrenal Cortical Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C5319", - "name": "Adult Meningeal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C212033", - "name": "Advanced Acral Melanoma", - "level": 5, - "leaf": true - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:24 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:00 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224 +fromRecord = +pageSize = 5 + + Get descendants for ncit C3224: + count = 5 + + [ + { + "code": "C4022", + "name": "Acral Lentiginous Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C204883", + "name": "Acral Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C188185", + "name": "Adrenal Cortical Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C5319", + "name": "Adult Meningeal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C212033", + "name": "Advanced Acral Melanoma", + "level": 5, + "leaf": true + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:00 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-inactive-replacements-for-code-list.txt b/bash-examples/samples/get-inactive-replacements-for-code-list.txt index a7cd4be9..e8848ed3 100644 --- a/bash-examples/samples/get-inactive-replacements-for-code-list.txt +++ b/bash-examples/samples/get-inactive-replacements-for-code-list.txt @@ -1,31 +1,25 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:52 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -list = C12658,C13320 - Get replacement concepts for C12658,C13320 - - [ - { - "code": "C12658", - "name": "Prokaryotic Cell", - "action": "retire", - "date": "2003-08-22", - "replacementCode": "C19157", - "replacementName": "Specimen" - }, - { - "code": "C13320", - "name": "Nose, Nasal Passages", - "action": "merge", - "date": "2003-08-22", - "replacementCode": "C12756", - "replacementName": "Nose" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:53 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:27 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +list = C12658,C13320 + Get replacement concepts for C12658,C13320 + + [ + { + "code": "C12658", + "name": "Prokaryotic Cell", + "action": "active" + }, + { + "code": "C13320", + "name": "Nose, Nasal Passages", + "action": "active" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:28 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-mapset-by-code-with-properties.txt b/bash-examples/samples/get-mapset-by-code-with-properties.txt index e767a18c..1d262351 100644 --- a/bash-examples/samples/get-mapset-by-code-with-properties.txt +++ b/bash-examples/samples/get-mapset-by-code-with-properties.txt @@ -1,57 +1,57 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:48 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -code = GO_to_NCIt_Mapping -include = properties - - Get mapset for GO_to_NCIt_Mapping - - { - "code": "GO_to_NCIt_Mapping", - "name": "GO_to_NCIt_Mapping", - "version": "February2020", - "properties": [ - { - "type": "loader", - "value": "MappingLoadServiceImpl" - }, - { - "type": "welcomeText", - "value": "This is a manual EVS mapping of concepts with equivalent meaning in the source and target terminology versions shown\r\nbelow:\r\n

\r\n   Source: GO (Gene Ontology) February2020\r\n
\r\n   Target: NCIt (NCI Thesaurus) 20.02d\r\n

\r\nThe browser links each mapped concept to that concept's page in the current production version of its terminology.\r\n

\r\nThe first GO to NCIt mapping was manually curated by editors working at NCI in 2009. Automated term matching was\r\nperformed to create a preliminary map of the content in the Biological Process branch of NCIt and the GO\r\nbiological_process branch. The preliminary map was reviewed and validated by editors working at NCI to ensure that terms\r\nwith the same definitions were mapped. The map is updated when changes to the GO content invalidate current mapped\r\nentries.\r\n

\r\nThe Version shows the month and year that the mapping data were extracted. The Release Date shows the day that this\r\nmapping was approved for publication." - }, - { - "type": "sourceTerminology", - "value": "go" - }, - { - "type": "sourceTerminologyVersion", - "value": "February2020" - }, - { - "type": "targetTerminology", - "value": "ncit" - }, - { - "type": "targetTerminologyVersion", - "value": "20.02d" - }, - { - "type": "sourceLoaded", - "value": "true" - }, - { - "type": "targetLoaded", - "value": "true" - }, - { - "type": "downloadOnly", - "value": "false" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:49 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:23 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +code = GO_to_NCIt_Mapping +include = properties + + Get mapset for GO_to_NCIt_Mapping + + { + "code": "GO_to_NCIt_Mapping", + "name": "GO_to_NCIt_Mapping", + "version": "February2020", + "properties": [ + { + "type": "loader", + "value": "MappingLoadServiceImpl" + }, + { + "type": "welcomeText", + "value": "This is a manual EVS mapping of concepts with equivalent meaning in the source and target terminology versions shown\r\nbelow:\r\n

\r\n   Source: GO (Gene Ontology) February2020\r\n
\r\n   Target: NCIt (NCI Thesaurus) 20.02d\r\n

\r\nThe browser links each mapped concept to that concept's page in the current production version of its terminology.\r\n

\r\nThe first GO to NCIt mapping was manually curated by editors working at NCI in 2009. Automated term matching was\r\nperformed to create a preliminary map of the content in the Biological Process branch of NCIt and the GO\r\nbiological_process branch. The preliminary map was reviewed and validated by editors working at NCI to ensure that terms\r\nwith the same definitions were mapped. The map is updated when changes to the GO content invalidate current mapped\r\nentries.\r\n

\r\nThe Version shows the month and year that the mapping data were extracted. The Release Date shows the day that this\r\nmapping was approved for publication." + }, + { + "type": "sourceTerminology", + "value": "go" + }, + { + "type": "sourceTerminologyVersion", + "value": "February2020" + }, + { + "type": "targetTerminology", + "value": "ncit" + }, + { + "type": "targetTerminologyVersion", + "value": "20.02d" + }, + { + "type": "sourceLoaded", + "value": "true" + }, + { + "type": "targetLoaded", + "value": "true" + }, + { + "type": "downloadOnly", + "value": "false" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:24 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-mapset-maps.txt b/bash-examples/samples/get-mapset-maps.txt index a7dfb557..5bb77dc6 100644 --- a/bash-examples/samples/get-mapset-maps.txt +++ b/bash-examples/samples/get-mapset-maps.txt @@ -1,100 +1,100 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:49 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -code = GO_to_NCIt_Mapping -include = minimal - - Get maps for mapset GO_to_NCIt_Mapping (fromRecord=0, pageSize=5) - - { - "total": 305, - "parameters": { - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5 - }, - "maps": [ - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "DNA integration", - "sourceCode": "GO:0015074", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "DNA Integration", - "targetCode": "C18855", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000006" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "DNA modification", - "sourceCode": "GO:0006304", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "DNA Modification Process", - "targetCode": "C19449", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000008" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "DNA recombination", - "sourceCode": "GO:0006310", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "DNA Recombination Process", - "targetCode": "C17082", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000009" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "RNA binding", - "sourceCode": "GO:0003723", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "RNA Binding", - "targetCode": "C20737", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000022" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "RNA polyadenylation", - "sourceCode": "GO:0043631", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "RNA Polyadenylation", - "targetCode": "C18947", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000026" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:50 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:24 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +code = GO_to_NCIt_Mapping +include = minimal + + Get maps for mapset GO_to_NCIt_Mapping (fromRecord=0, pageSize=5) + + { + "total": 305, + "parameters": { + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5 + }, + "maps": [ + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "DNA integration", + "sourceCode": "GO:0015074", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "DNA Integration", + "targetCode": "C18855", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000006" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "DNA modification", + "sourceCode": "GO:0006304", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "DNA Modification Process", + "targetCode": "C19449", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000008" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "DNA recombination", + "sourceCode": "GO:0006310", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "DNA Recombination Process", + "targetCode": "C17082", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000009" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "RNA binding", + "sourceCode": "GO:0003723", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "RNA Binding", + "targetCode": "C20737", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000022" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "RNA polyadenylation", + "sourceCode": "GO:0043631", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "RNA Polyadenylation", + "targetCode": "C18947", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000026" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:25 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-mapsets.txt b/bash-examples/samples/get-mapsets.txt index f6645014..ee85420b 100644 --- a/bash-examples/samples/get-mapsets.txt +++ b/bash-examples/samples/get-mapsets.txt @@ -1,114 +1,114 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:48 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -include = minimal - - Get all mapsets - - [ - { - "code": "GO_to_NCIt_Mapping", - "name": "GO_to_NCIt_Mapping", - "version": "February2020" - }, - { - "code": "ICD10_to_MedDRA_Mapping", - "name": "ICD10_to_MedDRA_Mapping", - "version": "July2023" - }, - { - "code": "SNOMEDCT_US_2024_03_01_to_ICD10CM_2024_Mappings", - "name": "SNOMEDCT_US_2024_03_01 to ICD10CM_2024 Mappings", - "terminology": "snomedct_us", - "version": "2024_03_01" - }, - { - "code": "NCIT_TO_SWISSPROT", - "name": "NCIT_TO_SWISSPROT", - "version": "Feb2025" - }, - { - "code": "NCIt_Maps_To_GDC", - "name": "NCIt_Maps_To_GDC", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_Maps_To_ICD9CM", - "name": "NCIt_Maps_To_ICD9CM", - "version": "25.02d", - "active": true - }, - { - "code": "ICDO_TO_NCI_MORPHOLOGY", - "name": "ICDO_TO_NCI_MORPHOLOGY", - "version": "2017-12-21" - }, - { - "code": "NCIt_Maps_To_MedDRA", - "name": "NCIt_Maps_To_MedDRA", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_Maps_To_ICDO3", - "name": "NCIt_Maps_To_ICDO3", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_to_ChEBI_Mapping", - "name": "NCIt_to_ChEBI_Mapping", - "version": "Aug2024" - }, - { - "code": "MA_to_NCIt_Mapping", - "name": "MA_to_NCIt_Mapping", - "version": "November2011" - }, - { - "code": "SNOMEDCT_US_2024_03_01_to_ICD10_2016_Mappings", - "name": "SNOMEDCT_US_2024_03_01 to ICD10_2016 Mappings", - "terminology": "snomedct_us", - "version": "2024_03_01" - }, - { - "code": "PDQ_2016_07_31_to_NCI_2024_06D_Mappings", - "name": "PDQ_2016_07_31 to NCI_2024_06D Mappings", - "terminology": "pdq", - "version": "2016_07_31" - }, - { - "code": "NCIt_to_HGNC_Mapping", - "name": "NCIt_to_HGNC_Mapping", - "version": "Feb2025" - }, - { - "code": "NCIt_Maps_To_ICD10CM", - "name": "NCIt_Maps_To_ICD10CM", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_Maps_To_ICD10", - "name": "NCIt_Maps_To_ICD10", - "version": "25.02d", - "active": true - }, - { - "code": "ICDO_TO_NCI_TOPOGRAPHY", - "name": "ICDO_TO_NCI_TOPOGRAPHY", - "version": "2017-12-21" - }, - { - "code": "ICDO_TO_NCI_AXIS", - "name": "ICDO_TO_NCI_AXIS", - "version": "2017-12-21" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:48 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:23 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +include = minimal + + Get all mapsets + + [ + { + "code": "GO_to_NCIt_Mapping", + "name": "GO_to_NCIt_Mapping", + "version": "February2020" + }, + { + "code": "ICD10_to_MedDRA_Mapping", + "name": "ICD10_to_MedDRA_Mapping", + "version": "July2023" + }, + { + "code": "NCIt_Maps_To_GDC", + "name": "NCIt_Maps_To_GDC", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_Maps_To_ICD9CM", + "name": "NCIt_Maps_To_ICD9CM", + "version": "25.07d", + "active": true + }, + { + "code": "NCIT_TO_SWISSPROT", + "name": "NCIT_TO_SWISSPROT", + "version": "Jul2025" + }, + { + "code": "SNOMEDCT_US_2025_03_01_to_ICD10CM_2025_Mappings", + "name": "SNOMEDCT_US_2025_03_01 to ICD10CM_2025 Mappings", + "terminology": "snomedct_us", + "version": "2025_03_01" + }, + { + "code": "ICDO_TO_NCI_MORPHOLOGY", + "name": "ICDO_TO_NCI_MORPHOLOGY", + "version": "2017-12-21" + }, + { + "code": "NCIt_Maps_To_MedDRA", + "name": "NCIt_Maps_To_MedDRA", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_Maps_To_ICDO3", + "name": "NCIt_Maps_To_ICDO3", + "version": "25.07d", + "active": true + }, + { + "code": "SNOMEDCT_US_2025_03_01_to_ICD10_2016_Mappings", + "name": "SNOMEDCT_US_2025_03_01 to ICD10_2016 Mappings", + "terminology": "snomedct_us", + "version": "2025_03_01" + }, + { + "code": "NCIt_to_ChEBI_Mapping", + "name": "NCIt_to_ChEBI_Mapping", + "version": "Aug2024" + }, + { + "code": "MA_to_NCIt_Mapping", + "name": "MA_to_NCIt_Mapping", + "version": "November2011" + }, + { + "code": "NCIt_Maps_To_ICD10CM", + "name": "NCIt_Maps_To_ICD10CM", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_Maps_To_ICD10", + "name": "NCIt_Maps_To_ICD10", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_to_HGNC_Mapping", + "name": "NCIt_to_HGNC_Mapping", + "version": "Jul2025" + }, + { + "code": "ICDO_TO_NCI_TOPOGRAPHY", + "name": "ICDO_TO_NCI_TOPOGRAPHY", + "version": "2017-12-21" + }, + { + "code": "ICDO_TO_NCI_AXIS", + "name": "ICDO_TO_NCI_AXIS", + "version": "2017-12-21" + }, + { + "code": "PDQ_2016_07_31_to_NCI_2025_06E_Mappings", + "name": "PDQ_2016_07_31 to NCI_2025_06E Mappings", + "terminology": "pdq", + "version": "2016_07_31" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:23 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-paths-to-code-from-ancestor.txt b/bash-examples/samples/get-paths-to-code-from-ancestor.txt index e74c4a8a..8a5994a6 100644 --- a/bash-examples/samples/get-paths-to-code-from-ancestor.txt +++ b/bash-examples/samples/get-paths-to-code-from-ancestor.txt @@ -1,122 +1,122 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:28 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224 -ancestor code = C2991 -include = - - Get paths to ancestor codes - - [ - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7058", - "name": "Melanocytic Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C4741", - "name": "Neoplasm by Morphology", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ], - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C9305", - "name": "Malignant Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7062", - "name": "Neoplasm by Special Category", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:29 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:04 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224 +ancestor code = C2991 +include = + + Get paths to ancestor codes + + [ + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7058", + "name": "Melanocytic Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C4741", + "name": "Neoplasm by Morphology", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ], + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C9305", + "name": "Malignant Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7062", + "name": "Neoplasm by Special Category", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:05 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-paths-to-code.txt b/bash-examples/samples/get-paths-to-code.txt index 6a75387f..483115a7 100644 --- a/bash-examples/samples/get-paths-to-code.txt +++ b/bash-examples/samples/get-paths-to-code.txt @@ -1,142 +1,142 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:27 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224 -ancestor code = -include = - - Get paths to root concept - - [ - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7058", - "name": "Melanocytic Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C4741", - "name": "Neoplasm by Morphology", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "level": 5, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ], - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C9305", - "name": "Malignant Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7062", - "name": "Neoplasm by Special Category", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "level": 5, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:28 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:03 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224 +ancestor code = +include = + + Get paths to root concept + + [ + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7058", + "name": "Melanocytic Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C4741", + "name": "Neoplasm by Morphology", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "level": 5, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ], + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C9305", + "name": "Malignant Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7062", + "name": "Neoplasm by Special Category", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "level": 5, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:04 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-paths.txt b/bash-examples/samples/get-paths.txt index db31cb40..3c13271f 100644 --- a/bash-examples/samples/get-paths.txt +++ b/bash-examples/samples/get-paths.txt @@ -1,189 +1,189 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:26 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = -ancestor code = -include = - - Get root codes - - [ - { - "code": "C12913", - "name": "Abnormal Cell", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C43431", - "name": "Activity", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C12219", - "name": "Anatomic Structure, System, or Substance", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20633", - "name": "Biochemical Pathway", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C17828", - "name": "Biological Process", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C12218", - "name": "Chemotherapy Regimen or Agent Combination", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20181", - "name": "Conceptual Entity", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20047", - "name": "Diagnostic or Prognostic Factor", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C1908", - "name": "Drug, Food, Chemical or Biomedical Material", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C22188", - "name": "Experimental Organism Anatomical Concept", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C22187", - "name": "Experimental Organism Diagnosis", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C16612", - "name": "Gene", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C26548", - "name": "Gene Product", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C97325", - "name": "Manufactured Object", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3910", - "name": "Molecular Abnormality", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C14250", - "name": "Organism", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20189", - "name": "Property or Attribute", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C28428", - "name": "Retired Concept", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:27 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:02 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = +ancestor code = +include = + + Get root codes + + [ + { + "code": "C12913", + "name": "Abnormal Cell", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C43431", + "name": "Activity", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C12219", + "name": "Anatomic Structure, System, or Substance", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20633", + "name": "Biochemical Pathway", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C17828", + "name": "Biological Process", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C12218", + "name": "Chemotherapy Regimen or Agent Combination", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20181", + "name": "Conceptual Entity", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20047", + "name": "Diagnostic or Prognostic Factor", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C1908", + "name": "Drug, Food, Chemical or Biomedical Material", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C22188", + "name": "Experimental Organism Anatomical Concept", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C22187", + "name": "Experimental Organism Diagnosis", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C16612", + "name": "Gene", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C26548", + "name": "Gene Product", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C97325", + "name": "Manufactured Object", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3910", + "name": "Molecular Abnormality", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C14250", + "name": "Organism", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20189", + "name": "Property or Attribute", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C28428", + "name": "Retired Concept", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:03 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-properties.txt b/bash-examples/samples/get-properties.txt index 796a1400..e22d36e7 100644 --- a/bash-examples/samples/get-properties.txt +++ b/bash-examples/samples/get-properties.txt @@ -1,437 +1,437 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:34 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = -include = - - Get properties for ncit: - - [ - { - "code": "oboInOwl:hasDbXref", - "name": "xRef", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NHC0", - "name": "code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P100", - "name": "OMIM_Number", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P101", - "name": "Homologous_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P102", - "name": "GenBank_Accession_Number", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P106", - "name": "Semantic_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P107", - "name": "Display_Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P108", - "name": "Preferred_Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P167", - "name": "Image_Link", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P171", - "name": "PubMedID_Primary_Reference", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P175", - "name": "NSC Number", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P200", - "name": "OLD_PARENT", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P201", - "name": "OLD_CHILD", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P203", - "name": "OLD_KIND", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P204", - "name": "OLD_ROLE", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P207", - "name": "UMLS_CUI", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P208", - "name": "NCI_META_CUI", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P210", - "name": "CAS_Registry", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P211", - "name": "GO_Annotation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P215", - "name": "KEGG_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P216", - "name": "BioCarta_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P302", - "name": "Accepted_Therapeutic_Use_For", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P310", - "name": "Concept_Status", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P315", - "name": "SNP_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P316", - "name": "Relative_Enzyme_Activity", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P317", - "name": "FDA_Table", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P319", - "name": "FDA_UNII_Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P320", - "name": "OID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P321", - "name": "EntrezGene_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P322", - "name": "Contributing_Source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P325", - "name": "ALT_DEFINITION", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P329", - "name": "PDQ_Open_Trial_Search_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P330", - "name": "PDQ_Closed_Trial_Search_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P331", - "name": "NCBI_Taxon_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P332", - "name": "MGI_Accession_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P333", - "name": "Use_For", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P334", - "name": "ICD-O-3_Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P350", - "name": "Chemical_Formula", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P351", - "name": "US_Recommended_Intake", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P352", - "name": "Tolerable_Level", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P353", - "name": "INFOODS", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P354", - "name": "USDA_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P355", - "name": "Unit", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P356", - "name": "Essential_Amino_Acid", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P357", - "name": "Essential_Fatty_Acid", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P358", - "name": "Nutrient", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P359", - "name": "Micronutrient", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P360", - "name": "Macronutrient", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P361", - "name": "Extensible_List", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P362", - "name": "miRBase_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P363", - "name": "Neoplastic_Status", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P364", - "name": "OLD_ASSOCIATION", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P366", - "name": "Legacy Concept Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P367", - "name": "PID_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P368", - "name": "CHEBI_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P369", - "name": "HGNC_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P371", - "name": "NICHD_Hierarchy_Term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P372", - "name": "Publish_Value_Set", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P374", - "name": "Value_Set_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P375", - "name": "Maps_To", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P376", - "name": "Term_Browser_Value_Set_Description", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P398", - "name": "Value_Set_Pair", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P399", - "name": "NCI_Drug_Dictionary_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P400", - "name": "ClinVar_Variation_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P90", - "name": "FULL_SYN", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P92", - "name": "Subsource", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P93", - "name": "Swiss_Prot", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P96", - "name": "Gene_Encodes_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P97", - "name": "DEFINITION", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P98", - "name": "DesignNote", - "terminology": "ncit", - "version": "25.02d" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:34 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:09 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = +include = + + Get properties for ncit: + + [ + { + "code": "oboInOwl:hasDbXref", + "name": "xRef", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NHC0", + "name": "code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P100", + "name": "OMIM_Number", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P101", + "name": "Homologous_Gene", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P102", + "name": "GenBank_Accession_Number", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P106", + "name": "Semantic_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P107", + "name": "Display_Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P108", + "name": "Preferred_Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P167", + "name": "Image_Link", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P171", + "name": "PubMedID_Primary_Reference", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P175", + "name": "NSC Number", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P200", + "name": "OLD_PARENT", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P201", + "name": "OLD_CHILD", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P203", + "name": "OLD_KIND", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P204", + "name": "OLD_ROLE", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P207", + "name": "UMLS_CUI", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P208", + "name": "NCI_META_CUI", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P210", + "name": "CAS_Registry", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P211", + "name": "GO_Annotation", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P215", + "name": "KEGG_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P216", + "name": "BioCarta_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P302", + "name": "Accepted_Therapeutic_Use_For", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P310", + "name": "Concept_Status", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P315", + "name": "SNP_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P316", + "name": "Relative_Enzyme_Activity", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P317", + "name": "FDA_Table", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P319", + "name": "FDA_UNII_Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P320", + "name": "OID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P321", + "name": "EntrezGene_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P322", + "name": "Contributing_Source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P325", + "name": "ALT_DEFINITION", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P329", + "name": "PDQ_Open_Trial_Search_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P330", + "name": "PDQ_Closed_Trial_Search_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P331", + "name": "NCBI_Taxon_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P332", + "name": "MGI_Accession_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P333", + "name": "Use_For", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P334", + "name": "ICD-O-3_Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P350", + "name": "Chemical_Formula", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P351", + "name": "US_Recommended_Intake", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P352", + "name": "Tolerable_Level", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P353", + "name": "INFOODS", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P354", + "name": "USDA_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P355", + "name": "Unit", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P356", + "name": "Essential_Amino_Acid", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P357", + "name": "Essential_Fatty_Acid", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P358", + "name": "Nutrient", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P359", + "name": "Micronutrient", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P360", + "name": "Macronutrient", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P361", + "name": "Extensible_List", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P362", + "name": "miRBase_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P363", + "name": "Neoplastic_Status", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P364", + "name": "OLD_ASSOCIATION", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P366", + "name": "Legacy Concept Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P367", + "name": "PID_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P368", + "name": "CHEBI_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P369", + "name": "HGNC_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P371", + "name": "NICHD_Hierarchy_Term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P372", + "name": "Publish_Value_Set", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P374", + "name": "Value_Set_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P375", + "name": "Maps_To", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P376", + "name": "Term_Browser_Value_Set_Description", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P398", + "name": "Value_Set_Pair", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P399", + "name": "NCI_Drug_Dictionary_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P400", + "name": "ClinVar_Variation_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P90", + "name": "FULL_SYN", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P92", + "name": "Subsource", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P93", + "name": "Swiss_Prot", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P96", + "name": "Gene_Encodes_Product", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P97", + "name": "DEFINITION", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P98", + "name": "DesignNote", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:10 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-property-by-code.txt b/bash-examples/samples/get-property-by-code.txt index 2845fc53..f2c3d416 100644 --- a/bash-examples/samples/get-property-by-code.txt +++ b/bash-examples/samples/get-property-by-code.txt @@ -1,21 +1,21 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:34 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = P302 -include = - - Get property for ncit P302: - - { - "code": "P302", - "name": "Accepted_Therapeutic_Use_For", - "terminology": "ncit", - "version": "25.02d" - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:35 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:10 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = P302 +include = + + Get property for ncit P302: + + { + "code": "P302", + "name": "Accepted_Therapeutic_Use_For", + "terminology": "ncit", + "version": "25.07d" + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:11 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-property-by-label.txt b/bash-examples/samples/get-property-by-label.txt index c4728a1f..ce33985c 100644 --- a/bash-examples/samples/get-property-by-label.txt +++ b/bash-examples/samples/get-property-by-label.txt @@ -1,35 +1,35 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:35 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = Accepted_Therapeutic_Use_For -include = synonyms - - Get property for ncit Accepted_Therapeutic_Use_For: - - { - "code": "P302", - "name": "Accepted_Therapeutic_Use_For", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Accepted Therapeutic Use For", - "type": "Display_Name" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "FULL_SYN" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "Preferred_Name" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:36 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:11 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = Accepted_Therapeutic_Use_For +include = synonyms + + Get property for ncit Accepted_Therapeutic_Use_For: + + { + "code": "P302", + "name": "Accepted_Therapeutic_Use_For", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Accepted Therapeutic Use For", + "type": "Display_Name" + }, + { + "name": "Accepted_Therapeutic_Use_For", + "type": "FULL_SYN" + }, + { + "name": "Accepted_Therapeutic_Use_For", + "type": "Preferred_Name" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:12 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-qualifier-by-code.txt b/bash-examples/samples/get-qualifier-by-code.txt index c385e17d..a6496f87 100644 --- a/bash-examples/samples/get-qualifier-by-code.txt +++ b/bash-examples/samples/get-qualifier-by-code.txt @@ -1,21 +1,21 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:37 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = P389 -include = - - Get qualifier for ncit P389: - - { - "code": "P389", - "name": "go-evi", - "terminology": "ncit", - "version": "25.02d" - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:38 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:13 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = P389 +include = + + Get qualifier for ncit P389: + + { + "code": "P389", + "name": "go-evi", + "terminology": "ncit", + "version": "25.07d" + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:14 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-qualifier-by-label.txt b/bash-examples/samples/get-qualifier-by-label.txt index 1a19cb67..790068ee 100644 --- a/bash-examples/samples/get-qualifier-by-label.txt +++ b/bash-examples/samples/get-qualifier-by-label.txt @@ -1,27 +1,27 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:38 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = go-evi -include = synonyms - - Get qualifier for ncit go-evi: - - { - "code": "P389", - "name": "go-evi", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "go-evi", - "type": "Preferred_Name" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:38 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:14 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = go-evi +include = synonyms + + Get qualifier for ncit go-evi: + + { + "code": "P389", + "name": "go-evi", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "go-evi", + "type": "Preferred_Name" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:14 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-qualifier.txt b/bash-examples/samples/get-qualifier.txt index a9773887..b0b5ecc7 100644 --- a/bash-examples/samples/get-qualifier.txt +++ b/bash-examples/samples/get-qualifier.txt @@ -1,107 +1,107 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:36 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = -include = - - Get qualifiers for ncit: - - [ - { - "code": "P383", - "name": "term-group", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P384", - "name": "term-source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P378", - "name": "Definition Source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P381", - "name": "attribution", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P385", - "name": "Source Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P386", - "name": "Subsource Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P393", - "name": "Relationship_to_Target", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P394", - "name": "Target_Term_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P395", - "name": "Target_Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P396", - "name": "Target_Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P397", - "name": "Target_Terminology_Version", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P387", - "name": "go-id", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P389", - "name": "go-evi", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P390", - "name": "go-source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P391", - "name": "source-date", - "terminology": "ncit", - "version": "25.02d" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:37 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:12 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = +include = + + Get qualifiers for ncit: + + [ + { + "code": "P383", + "name": "term-group", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P384", + "name": "term-source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P385", + "name": "Source Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P386", + "name": "Subsource Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P378", + "name": "Definition Source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P381", + "name": "attribution", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P387", + "name": "go-id", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P389", + "name": "go-evi", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P390", + "name": "go-source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P391", + "name": "source-date", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P393", + "name": "Relationship_to_Target", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P394", + "name": "Target_Term_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P395", + "name": "Target_Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P396", + "name": "Target_Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P397", + "name": "Target_Terminology_Version", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:13 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-replacements-for-inactive-code.txt b/bash-examples/samples/get-replacements-for-inactive-code.txt index 08e93fc7..7c247f47 100644 --- a/bash-examples/samples/get-replacements-for-inactive-code.txt +++ b/bash-examples/samples/get-replacements-for-inactive-code.txt @@ -1,23 +1,20 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:52 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C12658 - Get replacement concepts for C12658 - - [ - { - "code": "C12658", - "name": "Prokaryotic Cell", - "action": "retire", - "date": "2003-08-22", - "replacementCode": "C19157", - "replacementName": "Specimen" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:52 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:26 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C12658 + Get replacement concepts for C12658 + + [ + { + "code": "C12658", + "name": "Prokaryotic Cell", + "action": "active" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:27 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-role-by-code.txt b/bash-examples/samples/get-role-by-code.txt index e6ff2099..26d024c7 100644 --- a/bash-examples/samples/get-role-by-code.txt +++ b/bash-examples/samples/get-role-by-code.txt @@ -1,21 +1,21 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:32 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = R156 -include = - - Get role for ncit R156: - - { - "code": "R156", - "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d" - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:33 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:08 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = R156 +include = + + Get role for ncit R156: + + { + "code": "R156", + "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", + "terminology": "ncit", + "version": "25.07d" + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:09 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-role-by-label.txt b/bash-examples/samples/get-role-by-label.txt index 36a08316..7127619c 100644 --- a/bash-examples/samples/get-role-by-label.txt +++ b/bash-examples/samples/get-role-by-label.txt @@ -1,35 +1,35 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:33 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = Allele_Has_Abnormality -include = synonyms - - Get role for ncit Allele_Has_Abnormality: - - { - "code": "R153", - "name": "Allele_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Abnormality", - "type": "Display_Name" - }, - { - "name": "Allele_Has_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Allele_Has_Abnormality", - "type": "Preferred_Name" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:34 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:09 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = Allele_Has_Abnormality +include = synonyms + + Get role for ncit Allele_Has_Abnormality: + + { + "code": "R153", + "name": "Allele_Has_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Abnormality", + "type": "Display_Name" + }, + { + "name": "Allele_Has_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Allele_Has_Abnormality", + "type": "Preferred_Name" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:09 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-roles.txt b/bash-examples/samples/get-roles.txt index 59389339..bab70dda 100644 --- a/bash-examples/samples/get-roles.txt +++ b/bash-examples/samples/get-roles.txt @@ -1,587 +1,587 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:31 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = -include = - - Get roles for ncit: - - [ - { - "code": "R123", - "name": "Chemotherapy_Regimen_Has_Component", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R163", - "name": "Procedure_Has_Target_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R100", - "name": "Disease_Has_Associated_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R126", - "name": "Disease_Has_Associated_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R101", - "name": "Disease_Has_Primary_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R103", - "name": "Disease_Has_Normal_Tissue_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R104", - "name": "Disease_Has_Normal_Cell_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R105", - "name": "Disease_Has_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R108", - "name": "Disease_Has_Finding", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R115", - "name": "Disease_May_Have_Finding", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R139", - "name": "Disease_Excludes_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R142", - "name": "Disease_Excludes_Finding", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R124", - "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R125", - "name": "Chemical_Or_Drug_Has_Physiologic_Effect", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R146", - "name": "Chemical_Or_Drug_Affects_Gene_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R50", - "name": "Gene_Product_Has_Structural_Domain_Or_Motif", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R52", - "name": "Gene_Product_Has_Biochemical_Function", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R53", - "name": "Gene_Product_Plays_Role_In_Biological_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R54", - "name": "Gene_Product_Encoded_By_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R135", - "name": "Disease_Excludes_Primary_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R72", - "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R116", - "name": "Disease_May_Have_Associated_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R175", - "name": "Gene_Involved_In_Pathogenesis_Of_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R37", - "name": "Gene_Plays_Role_In_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R132", - "name": "Gene_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R133", - "name": "Gene_Product_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R41", - "name": "Gene_Found_In_Organism", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R40", - "name": "Gene_In_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R46", - "name": "Gene_Product_Has_Associated_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R49", - "name": "Gene_Product_Expressed_In_Tissue", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R51", - "name": "Gene_Product_Is_Physical_Part_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R130", - "name": "Gene_Is_Element_In_Pathway", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R131", - "name": "Gene_Product_Is_Element_In_Pathway", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R44", - "name": "Gene_Product_Has_Chemical_Classification", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R177", - "name": "Molecular_Abnormality_Involves_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R178", - "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R179", - "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R182", - "name": "Gene_Product_Variant_Of_Gene_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R42", - "name": "Gene_Product_Is_Biomarker_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R45", - "name": "Gene_Product_Has_Organism_Source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R176", - "name": "Disease_Mapped_To_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R106", - "name": "Disease_Has_Molecular_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R174", - "name": "Disease_Mapped_To_Chromosome", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R27", - "name": "Conceptual_Part_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R167", - "name": "Procedure_Has_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R169", - "name": "Procedure_Has_Partially_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R82", - "name": "Anatomic_Structure_Is_Physical_Part_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R122", - "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R88", - 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"code": "R45", + "name": "Gene_Product_Has_Organism_Source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R46", + "name": "Gene_Product_Has_Associated_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R47", + "name": "Gene_Product_Is_Biomarker_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R48", + "name": "Gene_Product_Malfunction_Associated_With_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R49", + "name": "Gene_Product_Expressed_In_Tissue", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R50", + "name": "Gene_Product_Has_Structural_Domain_Or_Motif", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R51", + "name": "Gene_Product_Is_Physical_Part_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R52", + "name": "Gene_Product_Has_Biochemical_Function", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R53", + "name": "Gene_Product_Plays_Role_In_Biological_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R54", + "name": "Gene_Product_Encoded_By_Gene", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R66", + "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R72", + "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R81", + "name": "Anatomic_Structure_Has_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R82", + "name": "Anatomic_Structure_Is_Physical_Part_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R88", + "name": "Disease_Is_Stage", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R89", + "name": "Disease_May_Have_Molecular_Abnormality", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:08 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-subset-by-code.txt b/bash-examples/samples/get-subset-by-code.txt index 6bb86fb9..8907582d 100644 --- a/bash-examples/samples/get-subset-by-code.txt +++ b/bash-examples/samples/get-subset-by-code.txt @@ -1,233 +1,233 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:46 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C81222 - - Get subset for C81222 - - { - "code": "C81222", - "name": "CDISC ADaM Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "children": [ - { - "code": "C208382", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C208381", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204411", - "name": "CDISC ADaM Analysis Stratum Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187458", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187457", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81223", - "name": "CDISC ADaM Date Imputation Flag Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81224", - "name": "CDISC ADaM Derivation Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C172334", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C172335", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C158114", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C158115", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187456", - "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187455", - "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204410", - "name": "CDISC ADaM Input Parameter Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C193278", - "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C193277", - "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81225", - "name": "CDISC ADaM Parameter Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C165644", - "name": "CDISC ADaM Pool for Integration Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C124296", - "name": "CDISC ADaM Subject Trial Status Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81226", - "name": "CDISC ADaM Time Imputation Flag Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204414", - "name": "CDISC ADaM Tobacco Product Category Response Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204413", - "name": "CDISC ADaM Tobacco Product Use Status Response Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204412", - "name": "CDISC ADaM Tobacco Use Transition Response Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:47 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:21 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C81222 + + Get subset for C81222 + + { + "code": "C81222", + "name": "CDISC ADaM Terminology", + "terminology": "ncit", + "version": "25.07d", + "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C208382", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C208381", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204411", + "name": "CDISC ADaM Analysis Stratum Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187458", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187457", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81223", + "name": "CDISC ADaM Date Imputation Flag Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81224", + "name": "CDISC ADaM Derivation Type Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172334", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172335", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C158114", + "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C158115", + "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187456", + "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187455", + "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204410", + "name": "CDISC ADaM Input Parameter Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C193278", + "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C193277", + "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81225", + "name": "CDISC ADaM Parameter Type Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C165644", + "name": "CDISC ADaM Pool for Integration Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C124296", + "name": "CDISC ADaM Subject Trial Status Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81226", + "name": "CDISC ADaM Time Imputation Flag Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204414", + "name": "CDISC ADaM Tobacco Product Category Response Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204413", + "name": "CDISC ADaM Tobacco Product Use Status Response Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204412", + "name": "CDISC ADaM Tobacco Use Transition Response Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:21 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-subset-members.txt b/bash-examples/samples/get-subset-members.txt index 060b3e2d..4d86364b 100644 --- a/bash-examples/samples/get-subset-members.txt +++ b/bash-examples/samples/get-subset-members.txt @@ -1,107 +1,107 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:47 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C81222 -members = 1 - - Get subset members (fromRecord=0, pageSize=10) - - [ - { - "code": "C208382", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C208381", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C204411", - "name": "CDISC ADaM Analysis Stratum Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C187458", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C187457", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C81223", - "name": "CDISC ADaM Date Imputation Flag Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C81224", - "name": "CDISC ADaM Derivation Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C172334", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C172335", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C158114", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:48 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:22 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C81222 +members = 1 + + Get subset members (fromRecord=0, pageSize=10) + + [ + { + "code": "C208382", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C208381", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204411", + "name": "CDISC ADaM Analysis Stratum Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187458", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187457", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81223", + "name": "CDISC ADaM Date Imputation Flag Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81224", + "name": "CDISC ADaM Derivation Type Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172334", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172335", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C158114", + "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:22 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-subsets.txt b/bash-examples/samples/get-subsets.txt index 017c342a..8e0ce990 100644 --- a/bash-examples/samples/get-subsets.txt +++ b/bash-examples/samples/get-subsets.txt @@ -1,19782 +1,20732 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:43 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit - - Get all subsets - - [ - { - "code": "C167405", - "name": "ACC/AHA EHR Terminology", - "terminology": "ncit", - "version": "25.02d", - "children": [ - { - "code": "C191200", - "name": "ACC/AHA Cardiovascular and Noncardiovascular Complications of COVID-19 Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191389", - "name": "Appendix 10: End-of-Life Management Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191382", - "name": "Appendix 3: COVID-19 Diagnosis Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191383", - "name": "Appendix 4: COVID-19 Cardiovascular Complications Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191396", - "name": "Acute Cardiovascular Complications Related to COVID-19 Infection Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191397", - "name": "Cardiovascular Mortality During Acute COVID-19 Infection Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191403", - "name": "Postacute Cardiovascular Sequelae of SARS-CoV-2 Infection or Long-Term Cardiovascular Complications of COVID-19 Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C191384", - "name": "Appendix 5: COVID-19 Noncardiovascular Complications 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true - }, - { - "code": "C191406", - "name": "Therapies for Supportive Care During COVID-19 Infection Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C191388", - "name": "Appendix 9: Therapeutic and Supportive Procedures for COVID-19 Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191399", - "name": "Electrophysiological Procedures Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191400", - "name": "Invasive Coronary/Vascular/Neurovascular Revascularization Treatment Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191401", - "name": "Mechanical Support Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - } - ] - }, - { - "code": "C171355", - "name": "CDISC Clinical Classification NEWS2 Test Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C171354", - "name": "CDISC Clinical Classification NEWS2 Test Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C171409", - "name": "CDISC Clinical Classification RASS Test Code 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"DEFAULT", - "active": true - } - ] - } - ] - }, - { - "code": "C178701", - "name": "SeroNet Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/SeroNet", - "children": [ - { - "code": "C178724", - "name": "SeroNet Aliquot Metadata", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/SeroNet", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C178723", - "name": "SeroNet Assay Metadata", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/SeroNet", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C178722", - "name": "SeroNet Assay Target Metadata", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/SeroNet", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C178721", - "name": "SeroNet Biospecimen Metadata", - "terminology": "ncit", - "version": 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"name": "Appendix 10: End-of-Life Management Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C191382", + "name": "Appendix 3: COVID-19 Diagnosis Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C191383", + "name": "Appendix 4: COVID-19 Cardiovascular Complications Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C191396", + "name": "Acute Cardiovascular Complications Related to COVID-19 Infection Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C191397", + "name": "Cardiovascular Mortality During Acute COVID-19 Infection Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C191403", + "name": "Postacute Cardiovascular Sequelae of SARS-CoV-2 Infection or Long-Term Cardiovascular Complications of COVID-19 Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C191384", + "name": "Appendix 5: COVID-19 Noncardiovascular Complications Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C191385", + "name": "Appendix 6: Symptoms and Signs Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C191398", + "name": "Current Symptoms and Signs: Clinical Symptoms Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + 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"code": "C191397", + "name": "Cardiovascular Mortality During Acute COVID-19 Infection Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C191403", + "name": "Postacute Cardiovascular Sequelae of SARS-CoV-2 Infection or Long-Term Cardiovascular Complications of COVID-19 Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C191384", + "name": "Appendix 5: COVID-19 Noncardiovascular Complications Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C191385", + "name": "Appendix 6: Symptoms and Signs Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C191398", + "name": "Current Symptoms and Signs: 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"code": "C193215", + "name": "mCode Brachytherapy Permanent Seeds Technique Value Set", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C193216", + "name": "mCode Brachytherapy Pulsed Dose Rate Technique Value Set", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C193217", + "name": "mCode Brachytherapy Radiopharmaceutical Technique Value Set", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C193253", + "name": "mCode Teleradiotherapy Technique Value Set", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C193237", + "name": "mCode Carbon Ion Beam Technique Value Set", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": 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"name": "Multi-agent Therapeutic Regimens", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C160951", + "name": "Single-agent Therapeutic Regimens", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C128613", + "name": "PI-RADS Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": true + }, + { + "code": "C167077", + "name": "SEER Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": false, + "children": [ + { + "code": "C167078", + "name": "SEER Rx Interactive Antineoplastic Drugs Database", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C167080", + "name": "SEER Rx Interactive Antineoplastic Drugs Database-Regimen", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + } + ] + }, + { + "code": "C178701", + "name": "SeroNet Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": false, + "children": [ + { + "code": "C178724", + "name": "SeroNet Aliquot Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178723", + "name": "SeroNet Assay Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178722", + "name": "SeroNet Assay Target Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178721", + "name": "SeroNet Biospecimen Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178720", + "name": "SeroNet Confirmatory Test Result", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178727", + "name": "SeroNet Consumable Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178725", + "name": "SeroNet Equipment Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178719", + "name": "SeroNet Prior Test Result", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178726", + "name": "SeroNet Reagent Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178718", + "name": "SeroNet Research Participant Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179059", + "name": "SeroNet Schema Details", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C189083", + "name": "SeroNet Study Descriptors", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C198975", + "name": "UBERON Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": true + }, + { + "code": "C67567", + "name": "UCUM Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": true + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:21 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-subtree-children.txt b/bash-examples/samples/get-subtree-children.txt index c862c0b3..27b9acf6 100644 --- a/bash-examples/samples/get-subtree-children.txt +++ b/bash-examples/samples/get-subtree-children.txt @@ -1,107 +1,112 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:25 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224 - - Get subtree children for ncit C3224: - count = 18 - - [ - { - "code": "C3802", - "label": "Amelanotic Melanoma", - "leaf": false - }, - { - "code": "C8410", - "label": "Breast Melanoma", - "leaf": true - }, - { - "code": "C131506", - "label": "Childhood Melanoma", - "leaf": false - }, - { - "code": "C3510", - "label": "Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C4236", - "label": "Epithelioid Cell Melanoma", - "leaf": false - }, - { - "code": "C8925", - "label": "Metastatic Melanoma", - "leaf": false - }, - { - "code": "C66756", - "label": "Mixed Epithelioid and Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C205125", - "label": "Nodular Melanoma", - "leaf": false - }, - { - "code": "C8711", - "label": "Non-Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C8562", - "label": "Ocular Melanoma", - "leaf": false - }, - { - "code": "C118828", - "label": "Orbital Melanoma", - "leaf": true - }, - { - "code": "C162547", - "label": "Penile Melanoma", - "leaf": false - }, - { - "code": "C7087", - "label": "Recurrent Melanoma", - "leaf": false - }, - { - "code": "C147983", - "label": "Refractory Melanoma", - "leaf": false - }, - { - "code": "C4228", - "label": "Regressing Melanoma", - "leaf": false - }, - { - "code": "C190239", - "label": "Resectable Melanoma", - "leaf": false - }, - { - "code": "C4237", - "label": "Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C148517", - "label": "Unresectable Melanoma", - "leaf": false - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:26 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:02 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224 + + Get subtree children for ncit C3224: + count = 19 + + [ + { + "code": "C3802", + "label": "Amelanotic Melanoma", + "leaf": false + }, + { + "code": "C8410", + "label": "Breast Melanoma", + "leaf": true + }, + { + "code": "C131506", + "label": "Childhood Melanoma", + "leaf": false + }, + { + "code": "C3510", + "label": "Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C4236", + "label": "Epithelioid Cell Melanoma", + "leaf": false + }, + { + "code": "C217198", + "label": "Localized Melanoma", + "leaf": false + }, + { + "code": "C215044", + "label": "Melanoma In Situ", + "leaf": false + }, + { + "code": "C8925", + "label": "Metastatic Melanoma", + "leaf": false + }, + { + "code": "C66756", + "label": "Mixed Epithelioid and Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C205125", + "label": "Nodular Melanoma", + "leaf": false + }, + { + "code": "C8711", + "label": "Non-Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C118828", + "label": "Orbital Melanoma", + "leaf": true + }, + { + "code": "C162547", + "label": "Penile Melanoma", + "leaf": false + }, + { + "code": "C7087", + "label": "Recurrent Melanoma", + "leaf": false + }, + { + "code": "C147983", + "label": "Refractory Melanoma", + "leaf": false + }, + { + "code": "C4228", + "label": "Regressing Melanoma", + "leaf": false + }, + { + "code": "C190239", + "label": "Resectable Melanoma", + "leaf": false + }, + { + "code": "C4237", + "label": "Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C148517", + "label": "Unresectable Melanoma", + "leaf": false + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:02 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-subtree.txt b/bash-examples/samples/get-subtree.txt index 4730ed9a..f5fed5a0 100644 --- a/bash-examples/samples/get-subtree.txt +++ b/bash-examples/samples/get-subtree.txt @@ -1,828 +1,833 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:24 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -code = C3224 - - Get subtree for ncit C3224: - count = 19 - - [ - { - "code": "C12913", - "label": "Abnormal Cell", - "leaf": false - }, - { - "code": "C43431", - "label": "Activity", - "leaf": false - }, - { - "code": "C12219", - "label": "Anatomic Structure, System, or Substance", - "leaf": false - }, - { - "code": "C20633", - "label": "Biochemical Pathway", - "leaf": false - }, - { - "code": "C17828", - "label": "Biological Process", - "leaf": false - }, - { - "code": "C12218", - "label": "Chemotherapy Regimen or Agent Combination", - "leaf": false - }, - { - "code": "C20181", - "label": "Conceptual Entity", - "leaf": false - }, - { - "code": "C20047", - "label": "Diagnostic or Prognostic Factor", - "leaf": false - }, - { - "code": "C7057", - "label": "Disease, Disorder or Finding", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C2991", - "label": "Disease or Disorder", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C35470", - "label": "Behavioral Disorder", - "leaf": false - }, - { - "code": "C8278", - "label": "Cancer-Related Condition", - "leaf": false - }, - { - "code": "C27551", - "label": "Disorder by Site", - "leaf": false - }, - { - "code": "C3101", - "label": "Genetic Disorder", - "leaf": false - }, - { - "code": "C3262", - "label": "Neoplasm", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C4741", - "label": "Neoplasm by Morphology", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C3709", - "label": "Epithelial Neoplasm", - "leaf": false - }, - { - "code": "C3708", - "label": "Germ Cell Tumor", - "leaf": false - }, - { - "code": "C27134", - "label": "Hematopoietic and Lymphoid Cell Neoplasm", - "leaf": false - }, - { - "code": "C7058", - "label": "Melanocytic Neoplasm", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C4661", - "label": "Central Nervous System Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C208332", - "label": "Childhood Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C204977", - "label": "Conjunctival Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C7161", - "label": "Cutaneous Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C173488", - "label": "Head and Neck Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C9498", - "label": "Melanocytoma", - "leaf": false - }, - { - "code": "C3224", - "label": "Melanoma", - "leaf": false - }, - { - "code": "C7570", - "label": "Nevus", - "leaf": false - }, - { - "code": "C205057", - "label": "Uveal Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C40335", - "label": "Vulvar Melanocytic Neoplasm", - "leaf": false - } - ] - }, - { - "code": "C7059", - "label": "Mesenchymal Cell Neoplasm", - "leaf": false - }, - { - "code": "C3786", - "label": "Mesothelial Neoplasm", - "leaf": false - }, - { - "code": "C35562", - "label": "Neuroepithelial, Perineurial, and Schwann Cell Neoplasm", - "leaf": false - } - ] - }, - { - "code": "C3263", - "label": "Neoplasm by Site", - "leaf": false - }, - { - "code": "C7062", - "label": "Neoplasm by Special Category", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C3677", - "label": "Benign Neoplasm", - "leaf": false - }, - { - "code": "C6283", - "label": "Childhood Neoplasm", - "leaf": false - }, - { - "code": "C6784", - "label": "Cystic Neoplasm", - "leaf": false - }, - { - "code": "C3264", - "label": "Embryonal Neoplasm", - "leaf": false - }, - { - "code": "C36035", - "label": "Encapsulated Neoplasm", - "leaf": false - }, - { - "code": "C7069", - "label": "Giant Cell Neoplasm", - "leaf": false - }, - { - "code": "C116915", - "label": "Liquid Tumor", - "leaf": true - }, - { - "code": "C36037", - "label": "Localized Neoplasm", - "leaf": false - }, - { - "code": "C9305", - "label": "Malignant Neoplasm", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C3851", - "label": "Aggravated Malignant Neoplasm", - "leaf": true - }, - { - "code": "C36025", - "label": "Anaplastic Malignant Neoplasm", - "leaf": false - }, - { - "code": "C188021", - "label": "B-Cell Malignant Neoplasm", - "leaf": false - }, - { - "code": "C7627", - "label": "Bilateral Malignant Neoplasm", - "leaf": false - }, - { - "code": "C2916", - "label": "Carcinoma", - "leaf": false - }, - { - "code": "C4005", - "label": "Childhood Malignant Neoplasm", - "leaf": false - }, - { - "code": "C4992", - "label": "Environment-Related Malignant Neoplasm", - "leaf": false - }, - { - "code": "C9479", - "label": "Hereditary Malignant Neoplasm", - "leaf": false - }, - { - "code": "C27770", - "label": "Immunodeficiency-Related Malignant Neoplasm", - "leaf": false - }, - { - "code": "C27223", - "label": "Infection-Related Malignant Neoplasm", - "leaf": false - }, - { - "code": "C8505", - "label": "Invasive Malignant Neoplasm", - "leaf": false - }, - { - "code": "C3161", - "label": "Leukemia", - "leaf": false - }, - { - "code": "C8576", - "label": "Localized Malignant Neoplasm", - "leaf": false - }, - { - "code": "C3208", - "label": "Lymphoma", - "leaf": false - }, - { - "code": "C156714", - "label": "Malignant Abdominal Neoplasm", - "leaf": false - }, - { - "code": "C35501", - "label": "Malignant Bone Marrow Neoplasm", - "leaf": false - }, - { - "code": "C9335", - "label": "Malignant Breast Neoplasm", - "leaf": false - }, - { - "code": "C114940", - "label": "Malignant Cardiovascular Neoplasm", - "leaf": false - }, - { - "code": "C4890", - "label": "Malignant Digestive System Neoplasm", - "leaf": false - }, - { - "code": "C3575", - "label": "Malignant Endocrine Neoplasm", - "leaf": false - }, - { - "code": "C4767", - "label": "Malignant Eye Neoplasm", - "leaf": false - }, - { - "code": "C121500", - "label": "Malignant Fibrohistiocytic Neoplasm", - "leaf": false - }, - { - "code": "C156484", - "label": "Malignant Genitourinary System Neoplasm", - "leaf": false - }, - { - "code": "C4925", - "label": "Malignant Germ Cell Tumor", - "leaf": false - }, - { - "code": "C4090", - "label": "Malignant Giant Cell Neoplasm", - "leaf": false - }, - { - "code": "C4013", - "label": "Malignant Head and Neck Neoplasm", - "leaf": false - }, - { - "code": "C212210", - "label": "Malignant Histiocytic and Dendritic Cell Neoplasm", - "leaf": false - }, - { - "code": "C35812", - "label": "Malignant Lymph Node Neoplasm", - "leaf": false - }, - { - "code": "C8991", - "label": "Malignant Mastocytosis", - "leaf": false - }, - { - "code": "C4456", - "label": "Malignant Mesothelioma", - "leaf": false - }, - { - "code": "C3729", - "label": "Malignant Mixed Neoplasm", - "leaf": false - }, - { - "code": "C166357", - "label": "Malignant Musculoskeletal Neoplasm", - "leaf": false - }, - { - "code": "C36041", - "label": "Malignant Neoplasm by Grade", - "leaf": false - }, - { - "code": "C35427", - "label": "Malignant Neoplasm of Multiple Primary Sites", - "leaf": false - }, - { - "code": "C65153", - "label": "Malignant Neoplasm, Uncertain Whether Primary or Metastatic", - "leaf": true - }, - { - "code": "C4788", - "label": "Malignant Nervous System Neoplasm", - "leaf": false - }, - { - "code": "C156715", - "label": "Malignant Pelvic Neoplasm", - "leaf": false - }, - { - "code": "C156711", - "label": "Malignant Peritoneal and Retroperitoneal Neoplasm", - "leaf": false - }, - { - "code": "C4571", - "label": "Malignant Respiratory System Neoplasm", - "leaf": false - }, - { - "code": "C2920", - "label": "Malignant Skin Neoplasm", - "leaf": false - }, - { - "code": "C4867", - "label": "Malignant Soft Tissue Neoplasm", - "leaf": false - }, - { - "code": "C132146", - "label": "Malignant Solid Neoplasm", - "leaf": false - }, - { - "code": "C6894", - "label": "Malignant Solitary Fibrous Tumor", - "leaf": false - }, - { - "code": "C3539", - "label": "Malignant Splenic Neoplasm", - "leaf": false - }, - { - "code": "C3576", - "label": "Malignant Thoracic Neoplasm", - "leaf": false - }, - { - "code": "C3224", - "label": "Melanoma", - "leaf": false - }, - { - "code": "C38156", - "label": "Metachronous Malignant Neoplasm", - "leaf": false - }, - { - "code": "C36049", - "label": "Moderately Differentiated Malignant Neoplasm", - "leaf": false - }, - { - "code": "C3520", - "label": "Myeloid Sarcoma", - "leaf": false - }, - { - "code": "C84270", - "label": "Myeloid/Lymphoid Neoplasms with Eosinophilia and Tyrosine Kinase Gene Fusions", - "leaf": false - }, - { - "code": "C9226", - "label": "Non-Hematologic Malignancy", - "leaf": true - }, - { - "code": "C46080", - "label": "Nonestrogen-Dependent Malignant Neoplasm", - "leaf": true - }, - { - "code": "C167168", - "label": "Obesity-Related Malignant Neoplasm", - "leaf": true - }, - { - "code": "C4993", - "label": "Occupational Malignant Neoplasm", - "leaf": false - }, - { - "code": "C36050", - "label": "Poorly Differentiated Malignant Neoplasm", - "leaf": false - }, - { - "code": "C7055", - "label": "Precursor Lymphoid Neoplasm", - "leaf": false - }, - { - "code": "C84509", - "label": "Primary Malignant Neoplasm", - "leaf": false - }, - { - "code": "C3716", - "label": "Primitive Neuroectodermal Tumor", - "leaf": false - }, - { - "code": "C172183", - "label": "Progesterone Receptor-Positive Malignant Neoplasm", - "leaf": false - }, - { - "code": "C27209", - "label": "Radiation-Related Malignant Neoplasm", - "leaf": false - }, - { - "code": "C4813", - "label": "Recurrent Malignant Neoplasm", - "leaf": false - }, - { - "code": "C120186", - "label": "Refractory Malignant Neoplasm", - "leaf": false - }, - { - "code": "C150602", - "label": "Resectable Malignant Neoplasm", - "leaf": false - }, - { - "code": "C9118", - "label": "Sarcoma", - "leaf": false - }, - { - "code": "C4968", - "label": "Secondary Malignant Neoplasm", - "leaf": false - }, - { - "code": "C201136", - "label": "Solid Pseudopapillary Neoplasm", - "leaf": false - }, - { - "code": "C177364", - "label": "Somatic-Type Malignancy", - "leaf": true - }, - { - "code": "C4969", - "label": "Therapy-Related Malignant Neoplasm", - "leaf": false - }, - { - "code": "C36051", - "label": "Undifferentiated Malignant Neoplasm", - "leaf": true - }, - { - "code": "C27359", - "label": "Unresectable Malignant Neoplasm", - "leaf": false - }, - { - "code": "C36052", - "label": "Well Differentiated Malignant Neoplasm", - "leaf": false - } - ] - }, - { - "code": "C3261", - "label": "Metastatic Neoplasm", - "leaf": false - }, - { - "code": "C102883", - "label": "Miscellaneous Neoplasm", - "leaf": true - }, - { - "code": "C6930", - "label": "Mixed Neoplasm", - "leaf": false - }, - { - "code": "C36029", - "label": "Necrotic Neoplasm", - "leaf": true - }, - { - "code": "C27933", - "label": "Neoplasm by Cause", - "leaf": false - }, - { - "code": "C45230", - "label": "Neoplasm by Obsolete Classification", - "leaf": false - }, - { - "code": "C6974", - "label": "Neoplasm of Uncertain Histogenesis", - "leaf": true - }, - { - "code": "C3646", - "label": "Neoplasm of Uncertain Malignant Potential", - "leaf": false - }, - { - "code": "C65157", - "label": "Neoplasm, Uncertain Whether Benign or Malignant", - "leaf": true - }, - { - "code": "C7068", - "label": "Neoplastic Polyp", - "leaf": false - }, - { - "code": "C36012", - "label": "Nodular Neoplasm", - "leaf": true - }, - { - "code": "C36036", - "label": "Non-Encapsulated Neoplasm", - "leaf": true - }, - { - "code": "C163003", - "label": "Non-Malignant Neoplasm", - "leaf": true - }, - { - "code": "C36030", - "label": "Osteolytic Neoplasm", - "leaf": false - }, - { - "code": "C36031", - "label": "Papillary Neoplasm", - "leaf": false - }, - { - "code": "C36032", - "label": "Premalignant Neoplasm", - "leaf": true - }, - { - "code": "C8509", - "label": "Primary Neoplasm", - "leaf": false - }, - { - "code": "C7201", - "label": "Rare Neoplasm", - "leaf": false - }, - { - "code": "C4798", - "label": "Recurrent Neoplasm", - "leaf": false - }, - { - "code": "C7628", - "label": "Refractory Neoplasm", - "leaf": false - }, - { - "code": "C211531", - "label": "Resectable Neoplasm", - "leaf": false - }, - { - "code": "C36255", - "label": "Secondary Neoplasm", - "leaf": false - }, - { - "code": "C9292", - "label": "Solid Neoplasm", - "leaf": false - }, - { - "code": "C27263", - "label": "Spindle Cell Neoplasm", - "leaf": false - }, - { - "code": "C36033", - "label": "Tubular Neoplasm", - "leaf": true - } - ] - } - ] - }, - { - "code": "C53529", - "label": "Non-Neoplastic Disorder", - "leaf": false - }, - { - "code": "C89328", - "label": "Pediatric Disorder", - "leaf": false - }, - { - "code": "C3340", - "label": "Polyp", - "leaf": false - }, - { - "code": "C2893", - "label": "Psychiatric Disorder", - "leaf": false - }, - { - "code": "C26684", - "label": "Radiation-Induced Disorder", - "leaf": false - }, - { - "code": "C4873", - "label": "Rare Disorder", - "leaf": false - }, - { - "code": "C28193", - "label": "Syndrome", - "leaf": false - } - ] - }, - { - "code": "C3367", - "label": "Finding", - "leaf": false - } - ] - }, - { - "code": "C1908", - "label": "Drug, Food, Chemical or Biomedical Material", - "leaf": false - }, - { - "code": "C22188", - "label": "Experimental Organism Anatomical Concept", - "leaf": false - }, - { - "code": "C22187", - "label": "Experimental Organism Diagnosis", - "leaf": false - }, - { - "code": "C16612", - "label": "Gene", - "leaf": false - }, - { - "code": "C26548", - "label": "Gene Product", - "leaf": false - }, - { - "code": "C97325", - "label": "Manufactured Object", - "leaf": false - }, - { - "code": "C3910", - "label": "Molecular Abnormality", - "leaf": false - }, - { - "code": "C14250", - "label": "Organism", - "leaf": false - }, - { - "code": "C20189", - "label": "Property or Attribute", - "leaf": false - }, - { - "code": "C28428", - "label": "Retired Concept", - "leaf": false - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:25 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:00 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +code = C3224 + + Get subtree for ncit C3224: + count = 19 + + [ + { + "code": "C12913", + "label": "Abnormal Cell", + "leaf": false + }, + { + "code": "C43431", + "label": "Activity", + "leaf": false + }, + { + "code": "C12219", + "label": "Anatomic Structure, System, or Substance", + "leaf": false + }, + { + "code": "C20633", + "label": "Biochemical Pathway", + "leaf": false 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"code": "C4741", + "label": "Neoplasm by Morphology", + "leaf": false, + "expanded": true, + "children": [ + { + "code": "C3709", + "label": "Epithelial Neoplasm", + "leaf": false + }, + { + "code": "C3708", + "label": "Germ Cell Tumor", + "leaf": false + }, + { + "code": "C27134", + "label": "Hematopoietic and Lymphoid Cell Neoplasm", + "leaf": false + }, + { + "code": "C7058", + "label": "Melanocytic Neoplasm", + "leaf": false, + "expanded": true, + "children": [ + { + "code": "C4661", + "label": "Central Nervous System Melanocytic Neoplasm", + "leaf": false + }, + { + "code": "C208332", + "label": "Childhood Melanocytic Neoplasm", + "leaf": false + }, + { + "code": "C204977", + "label": "Conjunctival Melanocytic Neoplasm", + "leaf": false + }, + { + "code": "C7161", + "label": "Cutaneous Melanocytic Neoplasm", + "leaf": false + }, + { + "code": "C173488", + "label": "Head and Neck Melanocytic Neoplasm", + "leaf": false + }, + { + "code": "C9498", + "label": "Melanocytoma", + "leaf": false + }, + { + "code": "C3224", + "label": "Melanoma", + "leaf": false + }, + { + "code": "C7570", + "label": "Nevus", + "leaf": false + }, + { + "code": "C205057", + "label": "Uveal Melanocytic Neoplasm", + "leaf": false + }, + { + "code": "C40335", + "label": "Vulvar Melanocytic Neoplasm", + "leaf": false + } + ] + }, + { + "code": "C7059", + "label": "Mesenchymal Cell Neoplasm", + "leaf": false + }, + { + "code": "C3786", + "label": "Mesothelial Neoplasm", + "leaf": false + }, + { + "code": "C35562", + "label": "Neuroepithelial, Perineurial, and Schwann Cell Neoplasm", + "leaf": false + } + ] + }, + { + "code": "C3263", + "label": "Neoplasm by Site", + "leaf": false + }, + { + "code": "C7062", + "label": "Neoplasm by Special Category", + "leaf": false, + "expanded": true, + "children": [ + { + "code": "C3677", + "label": "Benign Neoplasm", + "leaf": false + }, + { + "code": "C6283", + "label": "Childhood Neoplasm", + "leaf": false + }, + { + "code": "C6784", + "label": "Cystic Neoplasm", + "leaf": false + }, + { + "code": "C3264", + "label": "Embryonal Neoplasm", + "leaf": false + }, + { + "code": "C36035", + "label": "Encapsulated Neoplasm", + "leaf": false + }, + { + "code": "C7069", + "label": "Giant Cell Neoplasm", + "leaf": false + }, + { + "code": "C116915", + "label": "Liquid Tumor", + "leaf": true + }, + { + "code": "C36037", + "label": "Localized Neoplasm", + "leaf": false + }, + { + "code": "C9305", + "label": "Malignant Neoplasm", + "leaf": false, + "expanded": true, + "children": [ + { + "code": "C3851", + "label": "Aggravated Malignant Neoplasm", + "leaf": true + }, + { + "code": "C36025", + "label": "Anaplastic Malignant Neoplasm", + "leaf": false + }, + { + "code": "C188021", + "label": "B-Cell Malignant Neoplasm", + "leaf": false + }, + { + "code": "C7627", + "label": "Bilateral Malignant Neoplasm", + "leaf": false + }, + { + "code": "C2916", + "label": "Carcinoma", + "leaf": false + }, + { + "code": "C4005", + "label": "Childhood Malignant Neoplasm", + "leaf": false + }, + { + "code": "C2947", + "label": "Chordoma", + "leaf": false + }, + { + "code": "C4992", + "label": "Environment-Related Malignant Neoplasm", + "leaf": false + }, + { + "code": "C9479", + "label": "Hereditary Malignant Neoplasm", + "leaf": false + }, + { + "code": "C27770", + "label": "Immunodeficiency-Related Malignant Neoplasm", + "leaf": false + }, + { + "code": "C27223", + "label": "Infection-Related Malignant Neoplasm", + "leaf": false + }, + { + "code": "C8505", + "label": "Invasive Malignant Neoplasm", + "leaf": false + }, + { + "code": "C3161", + "label": "Leukemia", + "leaf": false + }, + { + "code": "C8576", + "label": "Localized Malignant Neoplasm", + "leaf": false + }, + { + "code": "C3208", + "label": "Lymphoma", + "leaf": false + }, + { + "code": "C156714", + "label": "Malignant Abdominal Neoplasm", + "leaf": false + }, + { + "code": "C35501", + "label": "Malignant Bone Marrow Neoplasm", + "leaf": false + }, + { + "code": "C9335", + "label": "Malignant Breast Neoplasm", + "leaf": false + }, + { + "code": "C114940", + "label": "Malignant Cardiovascular Neoplasm", + "leaf": false + }, + { + "code": "C4890", + "label": "Malignant Digestive System Neoplasm", + "leaf": false + }, + { + "code": "C3575", + "label": "Malignant Endocrine Neoplasm", + "leaf": false + }, + { + "code": "C4767", + "label": "Malignant Eye Neoplasm", + "leaf": false + }, + { + "code": "C121500", + "label": "Malignant Fibrohistiocytic Neoplasm", + "leaf": false + }, + { + "code": "C156484", + "label": "Malignant Genitourinary System Neoplasm", + "leaf": false + }, + { + "code": "C4925", + "label": "Malignant Germ Cell Tumor", + "leaf": false + }, + { + "code": "C4090", + "label": "Malignant Giant Cell Neoplasm", + "leaf": false + }, + { + "code": "C4013", + "label": "Malignant Head and Neck Neoplasm", + "leaf": false + }, + { + "code": "C212210", + "label": "Malignant Histiocytic and Dendritic Cell Neoplasm", + "leaf": false + }, + { + "code": "C35812", + "label": "Malignant Lymph Node Neoplasm", + "leaf": false + }, + { + "code": "C8991", + "label": "Malignant Mastocytosis", + "leaf": false + }, + { + "code": "C4456", + "label": "Malignant Mesothelioma", + "leaf": false + }, + { + "code": "C3729", + "label": "Malignant Mixed Neoplasm", + "leaf": false + }, + { + "code": "C166357", + "label": "Malignant Musculoskeletal Neoplasm", + "leaf": false + }, + { + "code": "C36041", + "label": "Malignant Neoplasm by Grade", + "leaf": false + }, + { + "code": "C35427", + "label": "Malignant Neoplasm of Multiple Primary Sites", + "leaf": false + }, + { + "code": "C65153", + "label": "Malignant Neoplasm, Uncertain Whether Primary or Metastatic", + "leaf": true + }, + { + "code": "C4788", + "label": "Malignant Nervous System Neoplasm", + "leaf": false + }, + { + "code": "C156715", + "label": "Malignant Pelvic Neoplasm", + "leaf": false + }, + { + "code": "C156711", + "label": "Malignant Peritoneal and Retroperitoneal Neoplasm", + "leaf": false + }, + { + "code": "C4571", + "label": "Malignant Respiratory System Neoplasm", + "leaf": false + }, + { + "code": "C2920", + "label": "Malignant Skin Neoplasm", + "leaf": false + }, + { + "code": "C4867", + "label": "Malignant Soft Tissue Neoplasm", + "leaf": false + }, + { + "code": "C132146", + "label": "Malignant Solid Neoplasm", + "leaf": false + }, + { + "code": "C6894", + "label": "Malignant Solitary Fibrous Tumor", + "leaf": false + }, + { + "code": "C3539", + "label": "Malignant Splenic Neoplasm", + "leaf": false + }, + { + "code": "C3576", + "label": "Malignant Thoracic Neoplasm", + "leaf": false + }, + { + "code": "C3224", + "label": "Melanoma", + "leaf": false + }, + { + "code": "C38156", + "label": "Metachronous Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36049", + "label": "Moderately Differentiated Malignant Neoplasm", + "leaf": false + }, + { + "code": "C3520", + "label": "Myeloid Sarcoma", + "leaf": false + }, + { + "code": "C84270", + "label": "Myeloid/Lymphoid Neoplasms with Eosinophilia and Tyrosine Kinase Gene Fusions", + "leaf": false + }, + { + "code": "C9226", + "label": "Non-Hematologic Malignancy", + "leaf": true + }, + { + "code": "C46080", + "label": "Nonestrogen-Dependent Malignant Neoplasm", + "leaf": true + }, + { + "code": "C167168", + "label": "Obesity-Related Malignant Neoplasm", + "leaf": true + }, + { + "code": "C4993", + "label": "Occupational Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36050", + "label": "Poorly Differentiated Malignant Neoplasm", + "leaf": false + }, + { + "code": "C7055", + "label": "Precursor Lymphoid Neoplasm", + "leaf": false + }, + { + "code": "C84509", + "label": "Primary Malignant Neoplasm", + "leaf": false + }, + { + "code": "C3716", + "label": "Primitive Neuroectodermal Tumor", + "leaf": false + }, + { + "code": "C172183", + "label": "Progesterone Receptor-Positive Malignant Neoplasm", + "leaf": false + }, + { + "code": "C27209", + "label": "Radiation-Related Malignant Neoplasm", + "leaf": false + }, + { + "code": "C4813", + "label": "Recurrent Malignant Neoplasm", + "leaf": false + }, + { + "code": "C120186", + "label": "Refractory Malignant Neoplasm", + "leaf": false + }, + { + "code": "C150602", + "label": "Resectable Malignant Neoplasm", + "leaf": false + }, + { + "code": "C9118", + "label": "Sarcoma", + "leaf": false + }, + { + "code": "C4968", + "label": "Secondary Malignant Neoplasm", + "leaf": false + }, + { + "code": "C201136", + "label": "Solid Pseudopapillary Neoplasm", + "leaf": false + }, + { + "code": "C177364", + "label": "Somatic-Type Malignancy", + "leaf": true + }, + { + "code": "C4969", + "label": "Therapy-Related Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36051", + "label": "Undifferentiated Malignant Neoplasm", + "leaf": true + }, + { + "code": "C27359", + "label": "Unresectable Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36052", + "label": "Well Differentiated Malignant Neoplasm", + "leaf": false + } + ] + }, + { + "code": "C3261", + "label": "Metastatic Neoplasm", + "leaf": false + }, + { + "code": "C102883", + "label": "Miscellaneous Neoplasm", + "leaf": true + }, + { + "code": "C6930", + "label": "Mixed Neoplasm", + "leaf": false + }, + { + "code": "C36029", + "label": "Necrotic Neoplasm", + "leaf": true + }, + { + "code": "C27933", + "label": "Neoplasm by Cause", + "leaf": false + }, + { + "code": "C45230", + "label": "Neoplasm by Obsolete Classification", + "leaf": false + }, + { + "code": "C6974", + "label": "Neoplasm of Uncertain Histogenesis", + "leaf": true + }, + { + "code": "C3646", + "label": "Neoplasm of Uncertain Malignant Potential", + "leaf": false + }, + { + "code": "C65157", + "label": "Neoplasm, Uncertain Whether Benign or Malignant", + "leaf": true + }, + { + "code": "C7068", + "label": "Neoplastic Polyp", + "leaf": false + }, + { + "code": "C36012", + "label": "Nodular Neoplasm", + "leaf": true + }, + { + "code": "C36036", + "label": "Non-Encapsulated Neoplasm", + "leaf": true + }, + { + "code": "C163003", + "label": "Non-Malignant Neoplasm", + "leaf": true + }, + { + "code": "C36030", + "label": "Osteolytic Neoplasm", + "leaf": false + }, + { + "code": "C36031", + "label": "Papillary Neoplasm", + "leaf": false + }, + { + "code": "C36032", + "label": "Premalignant Neoplasm", + "leaf": true + }, + { + "code": "C8509", + "label": "Primary Neoplasm", + "leaf": false + }, + { + "code": "C7201", + "label": "Rare Neoplasm", + "leaf": false + }, + { + "code": "C4798", + "label": "Recurrent Neoplasm", + "leaf": false + }, + { + "code": "C7628", + "label": "Refractory Neoplasm", + "leaf": false + }, + { + "code": "C211531", + "label": "Resectable Neoplasm", + "leaf": false + }, + { + "code": "C36255", + "label": "Secondary Neoplasm", + "leaf": false + }, + { + "code": "C9292", + "label": "Solid Neoplasm", + "leaf": false + }, + { + "code": "C27263", + "label": "Spindle Cell Neoplasm", + "leaf": false + }, + { + "code": "C36033", + "label": "Tubular Neoplasm", + "leaf": true + } + ] + } + ] + }, + { + "code": "C53529", + "label": "Non-Neoplastic Disorder", + "leaf": false + }, + { + "code": "C89328", + "label": "Pediatric Disorder", + "leaf": false + }, + { + "code": "C3340", + "label": "Polyp", + "leaf": false + }, + { + "code": "C2893", + "label": "Psychiatric Disorder", + "leaf": false + }, + { + "code": "C26684", + "label": "Radiation-Induced Disorder", + "leaf": false + }, + { + "code": "C4873", + "label": "Rare Disorder", + "leaf": false + }, + { + "code": "C28193", + "label": "Syndrome", + "leaf": false + } + ] + }, + { + "code": "C3367", + "label": "Finding", + "leaf": false + } + ] + }, + { + "code": "C1908", + "label": "Drug, Food, Chemical or Biomedical Material", + "leaf": false + }, + { + "code": "C22188", + "label": "Experimental Organism Anatomical Concept", + "leaf": false + }, + { + "code": "C22187", + "label": "Experimental Organism Diagnosis", + "leaf": false + }, + { + "code": "C16612", + "label": "Gene", + "leaf": false + }, + { + "code": "C26548", + "label": "Gene Product", + "leaf": false + }, + { + "code": "C97325", + "label": "Manufactured Object", + "leaf": false + }, + { + "code": "C3910", + "label": "Molecular Abnormality", + "leaf": false + }, + { + "code": "C14250", + "label": "Organism", + "leaf": false + }, + { + "code": "C20189", + "label": "Property or Attribute", + "leaf": false + }, + { + "code": "C28428", + "label": "Retired Concept", + "leaf": false + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:02 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-synonym-sources.txt b/bash-examples/samples/get-synonym-sources.txt index e362c741..0f490029 100644 --- a/bash-examples/samples/get-synonym-sources.txt +++ b/bash-examples/samples/get-synonym-sources.txt @@ -1,368 +1,369 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:39 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit - - Get synonym sources for ncit: - - [ - { - "code": "ACC/AHA", - "name": "American College of Cardiology / American Heart Association", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BIOCARTA", - "name": "BioCarta online maps of molecular pathways, adapted for NCI use", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BRIDG", - "name": "Biomedical Research Integrated Domain Model Group", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BRIDG 3.0.3", - "name": "Biomedical Research Integrated Domain Model Group, version 3.0.3", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BRIDG 5.3", - "name": "Biomedical Research Integrated Domain Model Group, version 5.3", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CBDD", - "name": "Chemical Biology and Drug Development", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CCPS", - "name": "Childhood Cancer Predisposition Study", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CDC", - "name": "U.S. Centers for Disease Control and Prevention", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CDISC", - "name": "Clinical Data Interchange Standards Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CDISC-GLOSS", - "name": "CDISC Glossary Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CPTAC", - "name": "Clinical Proteomic Tumor Analysis Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CRCH", - "name": "Cancer Research Center of Hawaii Nutrition Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTCAE", - "name": "Common Terminology Criteria for Adverse Events", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTCAE 3.0", - "name": "Common Terminology Criteria for Adverse Events, version 3.0", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTCAE 5.0", - "name": "Common Terminology Criteria for Adverse Events, version 5.0", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTDC", - "name": "Clinical Trials Data Commons", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTEP", - "name": "Cancer Therapy Evaluation Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTRP", - "name": "Clinical Trials Reporting Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CareLex", - "name": "CareLex electronic Trial Master File Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "Cellosaurus", - "name": "Cellosaurus - a knowledge resource on cell lines", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DCP", - "name": "NCI Division of Cancer Prevention Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DICOM", - "name": "Digital Imaging Communications in Medicine", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DIPG/DMG", - "name": "Diffuse Intrinsic Pontine Glioma/Diffuse Midline Glioma", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DTP", - "name": "NCI Developmental Therapeutics Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "EDQM-HC", - "name": "European Directorate for the Quality of Medicines & Healthcare", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "FDA", - "name": "U.S. Food and Drug Administration", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "GAIA", - "name": "Global Alignment of Immunization safety Assessment in pregnancy Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "GDC", - "name": "Genomic Data Commons", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "GENC", - "name": "Geopolitical Entities, Names, and Codes Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HGNC", - "name": "HUGO Gene Nomenclature Committee", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HL7", - "name": "Health Level Seven International", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HemOnc", - "name": "HemOnc.org (A Free Hematology/Oncology Reference)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ICD-10", - "name": "International Classification of Diseases, Tenth Revision", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ICDC", - "name": "International Cancer Genome Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ICH", - "name": "International Conference on Harmonization", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "INC", - "name": "International Neonatal Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "JAX", - "name": "Jackson Laboratories Mouse Terminology, adapted for NCI use", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "KEGG", - "name": "KEGG Pathway Database", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "MRCT-Ctr", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NCI", - "name": "National Cancer Institute Thesaurus", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NCI-GLOSS", - "name": "NCI Dictionary of Cancer Terms", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NCPDP", - "name": "National Council for Prescription Drug Programs", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NDC", - "name": "National Drug Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NICHD", - "name": "National Institute of Child Health and Human Development", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "OORO", - "name": "Operational Ontology for Radiation Oncology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ORCHESTRA", - "name": "Multinational project funded by the European Commission to advance the knowledge of the SARS-CoV-2 infection and its long-term effects", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PCDC", - "name": "Pediatric Cancer Data Commons", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PI-RADS", - "name": "Prostate Imaging-Reporting and Data System", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PID", - "name": "NCI Nature Pathway Interaction Database", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PRO-CTCAE", - "name": "PRO-CTCAE (Patient Reported Outcomes version of Common Terminology Criteria for Adverse Events)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "RENI", - "name": "Registry Nomenclature Information System", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SEER", - "name": "Surveillance, Epidemiology, and End Results Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SeroNet", - "name": "NCI Serological Sciences Network for COVID-19", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "UBERON", - "name": "Uber-anatomy Ontology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "UCUM", - "name": "Unified Code for Units of Measure", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "WHO", - "name": "World Health Organization", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ZFin", - "name": "Zebrafish Information Network", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "caDSR", - "name": "Cancer Data Standards Registry and Repository", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "mCode", - "name": "Minimal Common Oncology Data Elements", - "terminology": "ncit", - "version": "25.02d" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:40 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:15 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit + + Get synonym sources for ncit: + + [ + { + "code": "ACC/AHA", + "name": "American College of Cardiology / American Heart Association", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BIOCARTA", + "name": "BioCarta online maps of molecular pathways, adapted for NCI use", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BRIDG", + "name": "Biomedical Research Integrated Domain Model Group", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BRIDG 3.0.3", + "name": "Biomedical Research Integrated Domain Model Group, version 3.0.3", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BRIDG 5.3", + "name": "Biomedical Research Integrated Domain Model Group, version 5.3", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CBDD", + "name": "Chemical Biology and Drug Development", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CCPS", + "name": "Childhood Cancer Predisposition Study", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CDC", + "name": "U.S. Centers for Disease Control and Prevention", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CDISC", + "name": "Clinical Data Interchange Standards Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CDISC-GLOSS", + "name": "CDISC Glossary Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CPTAC", + "name": "Clinical Proteomic Tumor Analysis Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CRCH", + "name": "Cancer Research Center of Hawaii Nutrition Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTCAE", + "name": "Common Terminology Criteria for Adverse Events", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTCAE 3.0", + "name": "Common Terminology Criteria for Adverse Events, version 3.0", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTCAE 5.0", + "name": "Common Terminology Criteria for Adverse Events, version 5.0", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTDC", + "name": "Clinical Trials Data Commons", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTEP", + "name": "Cancer Therapy Evaluation Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTRP", + "name": "Clinical Trials Reporting Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CareLex", + "name": "CareLex electronic Trial Master File Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "Cellosaurus", + "name": "Cellosaurus - a knowledge resource on cell lines", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DCP", + "name": "NCI Division of Cancer Prevention Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DICOM", + "name": "Digital Imaging Communications in Medicine", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DIPG/DMG", + "name": "Diffuse Intrinsic Pontine Glioma/Diffuse Midline Glioma", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DTP", + "name": "NCI Developmental Therapeutics Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "EDQM-HC", + "name": "European Directorate for the Quality of Medicines & Healthcare", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "FDA", + "name": "U.S. Food and Drug Administration", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "GAIA", + "name": "Global Alignment of Immunization safety Assessment in pregnancy Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "GDC", + "name": "Genomic Data Commons", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "GENC", + "name": "Geopolitical Entities, Names, and Codes Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HGNC", + "name": "HUGO Gene Nomenclature Committee", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HL7", + "name": "Health Level Seven International", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HemOnc", + "name": "HemOnc.org (A Free Hematology/Oncology Reference)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ICD-10", + "name": "International Classification of Diseases, Tenth Revision", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ICDC", + "name": "International Cancer Genome Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ICH", + "name": "International Conference on Harmonization", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "INC", + "name": "International Neonatal Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "JAX", + "name": "Jackson Laboratories Mouse Terminology, adapted for NCI use", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "KEGG", + "name": "KEGG Pathway Database", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "MRCT-Ctr", + "name": "MRCT Center Clinical Research Plain Language Glossary at Harvard and Brigham and Women's Hospital", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NCI", + "name": "National Cancer Institute Thesaurus", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NCI-GLOSS", + "name": "NCI Dictionary of Cancer Terms", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NCPDP", + "name": "National Council for Prescription Drug Programs", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NDC", + "name": "National Drug Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NICHD", + "name": "National Institute of Child Health and Human Development", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "OORO", + "name": "Operational Ontology for Radiation Oncology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ORCHESTRA", + "name": "Multinational project funded by the European Commission to advance the knowledge of the SARS-CoV-2 infection and its long-term effects", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PCDC", + "name": "Pediatric Cancer Data Commons", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PI-RADS", + "name": "Prostate Imaging-Reporting and Data System", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PID", + "name": "NCI Nature Pathway Interaction Database", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PRO-CTCAE", + "name": "PRO-CTCAE (Patient Reported Outcomes version of Common Terminology Criteria for Adverse Events)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "RENI", + "name": "Registry Nomenclature Information System", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SEER", + "name": "Surveillance, Epidemiology, and End Results Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SeroNet", + "name": "NCI Serological Sciences Network for COVID-19", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "UBERON", + "name": "Uber-anatomy Ontology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "UCUM", + "name": "Unified Code for Units of Measure", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "WHO", + "name": "World Health Organization", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ZFin", + "name": "Zebrafish Information Network", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "caDSR", + "name": "Cancer Data Standards Registry and Repository", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "mCode", + "name": "Minimal Common Oncology Data Elements", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:16 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-synonym-type-by-code.txt b/bash-examples/samples/get-synonym-type-by-code.txt index f0da8942..0522baa3 100644 --- a/bash-examples/samples/get-synonym-type-by-code.txt +++ b/bash-examples/samples/get-synonym-type-by-code.txt @@ -1,51 +1,51 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:41 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = P90 -include = summary - - Get synonym types for ncit P90: - - { - "code": "P90", - "name": "FULL_SYN", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Term & Source Data", - "type": "Display_Name" - }, - { - "name": "FULL_SYN", - "type": "FULL_SYN" - }, - { - "name": "Synonym with Source Data", - "type": "FULL_SYN" - }, - { - "name": "FULL_SYN", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:42 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:17 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = P90 +include = summary + + Get synonym types for ncit P90: + + { + "code": "P90", + "name": "FULL_SYN", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Term & Source Data", + "type": "Display_Name" + }, + { + "name": "FULL_SYN", + "type": "FULL_SYN" + }, + { + "name": "Synonym with Source Data", + "type": "FULL_SYN" + }, + { + "name": "FULL_SYN", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:17 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-synonym-types.txt b/bash-examples/samples/get-synonym-types.txt index 3307261a..270a6a3f 100644 --- a/bash-examples/samples/get-synonym-types.txt +++ b/bash-examples/samples/get-synonym-types.txt @@ -1,35 +1,35 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:40 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -codeOrLabel = -include = - - Get synonym types for ncit: - - [ - { - "code": "P107", - "name": "Display_Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P108", - "name": "Preferred_Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P90", - "name": "FULL_SYN", - "terminology": "ncit", - "version": "25.02d" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:41 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:16 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +codeOrLabel = +include = + + Get synonym types for ncit: + + [ + { + "code": "P107", + "name": "Display_Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P108", + "name": "Preferred_Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P90", + "name": "FULL_SYN", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:17 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-term-types.txt b/bash-examples/samples/get-term-types.txt index ef35971a..1df682c1 100644 --- a/bash-examples/samples/get-term-types.txt +++ b/bash-examples/samples/get-term-types.txt @@ -1,135 +1,135 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:39 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit - - Get term types for ncit: - - [ - { - "code": "AB", - "name": "Abbreviation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "AD", - "name": "Adjectival form (and other parts of grammar)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "AQ", - "name": "*Antiquated preferred term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "AQS", - "name": "Antiquated term, use when there are antiquated synonyms within a concept", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BR", - "name": "US brand name, which may be trademarked", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CA2", - "name": "ISO 3166 alpha-2 country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CA3", - "name": "ISO 3166 alpha-3 country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CI", - "name": "ISO country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CN", - "name": "Drug study code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CNU", - "name": "ISO 3166 numeric country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CS", - "name": "US State Department country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DN", - "name": "Display name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "FB", - "name": "Foreign brand name, which may be trademarked", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HD", - "name": "*Header (groups concepts, but not used for coding data)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HT", - "name": "Hierarchical term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "LLT", - "name": "Lower level term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PT", - "name": "*Preferred term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "RT", - "name": "Related term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SN", - "name": "Chemical structure name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SY", - "name": "Synonym", - "terminology": "ncit", - "version": "25.02d" - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:39 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:29:15 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit + + Get term types for ncit: + + [ + { + "code": "AB", + "name": "Abbreviation", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "AD", + "name": "Adjectival form (and other parts of grammar)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "AQ", + "name": "*Antiquated preferred term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "AQS", + "name": "Antiquated term, use when there are antiquated synonyms within a concept", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BR", + "name": "US brand name, which may be trademarked", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CA2", + "name": "ISO 3166 alpha-2 country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CA3", + "name": "ISO 3166 alpha-3 country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CI", + "name": "ISO country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CN", + "name": "Drug study code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CNU", + "name": "ISO 3166 numeric country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CS", + "name": "US State Department country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DN", + "name": "Display name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "FB", + "name": "Foreign brand name, which may be trademarked", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HD", + "name": "*Header (groups concepts, but not used for coding data)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HT", + "name": "Hierarchical term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "LLT", + "name": "Lower level term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PT", + "name": "*Preferred term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "RT", + "name": "Related term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SN", + "name": "Chemical structure name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SY", + "name": "Synonym", + "terminology": "ncit", + "version": "25.07d" + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:15 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/get-terminologies.txt b/bash-examples/samples/get-terminologies.txt index bced914b..af231954 100644 --- a/bash-examples/samples/get-terminologies.txt +++ b/bash-examples/samples/get-terminologies.txt @@ -1,59 +1,65 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:18 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -tag = monthly -latest = true - - Performing terminologies lookup - count = 1 - - [ - { - "terminology": "ncit", - "version": "25.02d", - "date": "February 24, 2025", - "name": "NCI Thesaurus 25.02d", - "description": "NCI Thesaurus, a controlled vocabulary in support of NCI administrative and scientific activities. Produced by the Enterprise Vocabulary System (EVS), a project by the NCI Center for Biomedical Informatics and Information Technology. National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, U.S.A.", - "graph": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus25.02d.owl", - "terminologyVersion": "ncit_25.02d", - "latest": true, - "tags": { - "monthly": "true" - }, - "indexName": "concept_ncit_2502d", - "objectIndexName": "evs_object_ncit_2502d", - "metadata": { - "uiLabel": "NCI Thesaurus", - "maxVersions": 3, - "loader": "rdf", - "conceptStatuses": [ - "Obsolete_Concept", - "Header_Concept", - "Retired_Concept", - "Concept_Pending_Approval", - "Provisional_Concept" - ], - "retiredStatusValue": "Retired_Concept", - "detailsColumns": { - "synonyms-termType": true, - "synonyms-code": true, - "synonyms-subSource": true, - "synonyms-source": true, - "definitions-attribution": true, - "definitions-source": true - }, - "hierarchy": true, - "history": false, - "sourceCt": 74, - "subsetLink": "P374", - "codeLabel": "NCI Thesaurus Code" - } - } - ] - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:19 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:28:55 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +tag = monthly +latest = true + + Performing terminologies lookup + count = 1 + + [ + { + "terminology": "ncit", + "version": "25.07d", + "date": "July 28, 2025", + "name": "NCI Thesaurus 25.07d", + "description": "NCI Thesaurus, a controlled vocabulary in support of NCI administrative and scientific activities. Produced by the Enterprise Vocabulary System (EVS), a project by the NCI Center for Biomedical Informatics and Information Technology. National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, U.S.A.", + "graph": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus_25.07d.owl", + "terminologyVersion": "ncit_25.07d", + "latest": true, + "tags": { + "monthly": "true" + }, + "indexName": "concept_ncit_2507d", + "objectIndexName": "evs_object_ncit_2507d", + "metadata": { + "uiLabel": "NCI Thesaurus", + "maxVersions": 3, + "loader": "rdf", + "conceptStatuses": [ + "Obsolete_Concept", + "Header_Concept", + "Retired_Concept", + "Provisional_Concept", + "Concept_Pending_Approval" + ], + "retiredStatusValue": "Retired_Concept", + "detailsColumns": { + "synonyms-termType": true, + "synonyms-code": true, + "synonyms-subSource": true, + "synonyms-source": true, + "definitions-attribution": true, + "definitions-source": true + }, + "hierarchy": true, + "history": false, + "sourceCt": 74, + "subsetLink": "P374", + "codeLabel": "NCI Thesaurus Code", + "extraSubsets": { + "C6283": "C143048", + "C190573": "C6283", + "C4005": "C6283" + }, + "historyVersion": "25.07d" + } + } + ] + +----------------------------------------------------- +Finished ...Mon Aug 25 10:28:56 PDT 2025 +----------------------------------------------------- + diff --git a/bash-examples/samples/sparql-code-query.txt b/bash-examples/samples/sparql-code-query.txt index de655b4f..d0724773 100644 --- a/bash-examples/samples/sparql-code-query.txt +++ b/bash-examples/samples/sparql-code-query.txt @@ -1,45 +1,45 @@ ------------------------------------------------------ -Starting ...Wed, Mar 12, 2025 4:12:22 PM ------------------------------------------------------ -url = https://api-evsrest.nci.nih.gov/api/v1 -terminology = ncit -term = melanoma -include = -sparql = ../curl-examples/sparql-queries/code-query.txt - - Find concepts for ncit melanoma: - - { - "total": 1, - "timeTaken": 31, - "parameters": { - "term": "melanoma", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 10, - "codeList": [ - "C3224" - ], - "terminology": [ - "ncit" - ], - "sparql": "SELECT ?code WHERE { ?x a owl:Class . ?x :NHC0 ?code . ?x :P108 \"Melanoma\" }" - }, - "concepts": [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] - } - ------------------------------------------------------ -Finished ...Wed, Mar 12, 2025 4:12:23 PM ------------------------------------------------------ - +----------------------------------------------------- +Starting ...Mon Aug 25 10:28:59 PDT 2025 +----------------------------------------------------- +url = https://api-evsrest.nci.nih.gov/api/v1 +terminology = ncit +term = melanoma +include = +sparql = ../curl-examples/sparql-queries/code-query.txt + + Find concepts for ncit melanoma: + + { + "total": 1, + "timeTaken": 59, + "parameters": { + "term": "melanoma", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 10, + "codeList": [ + "C3224" + ], + "terminology": [ + "ncit" + ], + "sparql": "SELECT ?code WHERE { ?x a owl:Class . ?x :NHC0 ?code . ?x :P108 \"Melanoma\" }" + }, + "concepts": [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] + } + +----------------------------------------------------- +Finished ...Mon Aug 25 10:29:00 PDT 2025 +----------------------------------------------------- + diff --git a/curl-examples/samples/find-concepts-by-search-property-code.txt b/curl-examples/samples/find-concepts-by-search-property-code.txt index 7dec4fd6..93123d17 100644 --- a/curl-examples/samples/find-concepts-by-search-property-code.txt +++ b/curl-examples/samples/find-concepts-by-search-property-code.txt @@ -1,79 +1,91 @@ -{ - "total": 1, - "timeTaken": 30, - "parameters": { - "term": "XAV05295I5", - "type": "contains", - "include": "properties", - "fromRecord": 0, - "pageSize": 10, - "property": [ - "P319" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C61305", - "name": "Sivifene", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true, - "properties": [ - { - "type": "CAS_Registry", - "value": "2675-35-6" - }, - { - "type": "Chemical_Formula", - "value": "C19H14N4O6" - }, - { - "type": "Contributing_Source", - "value": "FDA" - }, - { - "type": "Contributing_Source", - "value": "GDC" - }, - { - "type": "FDA_UNII_Code", - "value": "XAV05295I5" - }, - { - "type": "Legacy Concept Name", - "value": "A-007" - }, - { - "type": "Maps_To", - "value": "Sivifene" - }, - { - "type": "NCI_Drug_Dictionary_ID", - "value": "485274" - }, - { - "type": "PDQ_Closed_Trial_Search_ID", - "value": "485274" - }, - { - "type": "PDQ_Open_Trial_Search_ID", - "value": "485274" - }, - { - "type": "Semantic_Type", - "value": "Pharmacologic Substance" - }, - { - "type": "UMLS_CUI", - "value": "C0385861" - } - ] - } - ] -} - +{ + "total": 1, + "timeTaken": 37, + "parameters": { + "term": "XAV05295I5", + "type": "contains", + "include": "properties", + "fromRecord": 0, + "pageSize": 10, + "property": [ + "P319" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C61305", + "name": "Sivifene", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true, + "properties": [ + { + "code": "P210", + "type": "CAS_Registry", + "value": "2675-35-6" + }, + { + "code": "P350", + "type": "Chemical_Formula", + "value": "C19H14N4O6" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "FDA" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "GDC" + }, + { + "code": "P319", + "type": "FDA_UNII_Code", + "value": "XAV05295I5" + }, + { + "code": "P366", + "type": "Legacy Concept Name", + "value": "A-007" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Sivifene" + }, + { + "code": "P399", + "type": "NCI_Drug_Dictionary_ID", + "value": "485274" + }, + { + "code": "P330", + "type": "PDQ_Closed_Trial_Search_ID", + "value": "485274" + }, + { + "code": "P329", + "type": "PDQ_Open_Trial_Search_ID", + "value": "485274" + }, + { + "code": "P106", + "type": "Semantic_Type", + "value": "Pharmacologic Substance" + }, + { + "code": "P207", + "type": "UMLS_CUI", + "value": "C0385861" + } + ] + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-property-label.txt b/curl-examples/samples/find-concepts-by-search-property-label.txt index 3ca2588c..47cb3f97 100644 --- a/curl-examples/samples/find-concepts-by-search-property-label.txt +++ b/curl-examples/samples/find-concepts-by-search-property-label.txt @@ -1,79 +1,91 @@ -{ - "total": 1, - "timeTaken": 60, - "parameters": { - "term": "XAV05295I5", - "type": "contains", - "include": "properties", - "fromRecord": 0, - "pageSize": 10, - "property": [ - "FDA_UNII_Code" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C61305", - "name": "Sivifene", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true, - "properties": [ - { - "type": "CAS_Registry", - "value": "2675-35-6" - }, - { - "type": "Chemical_Formula", - "value": "C19H14N4O6" - }, - { - "type": "Contributing_Source", - "value": "FDA" - }, - { - "type": "Contributing_Source", - "value": "GDC" - }, - { - "type": "FDA_UNII_Code", - "value": "XAV05295I5" - }, - { - "type": "Legacy Concept Name", - "value": "A-007" - }, - { - "type": "Maps_To", - "value": "Sivifene" - }, - { - "type": "NCI_Drug_Dictionary_ID", - "value": "485274" - }, - { - "type": "PDQ_Closed_Trial_Search_ID", - "value": "485274" - }, - { - "type": "PDQ_Open_Trial_Search_ID", - "value": "485274" - }, - { - "type": "Semantic_Type", - "value": "Pharmacologic Substance" - }, - { - "type": "UMLS_CUI", - "value": "C0385861" - } - ] - } - ] -} - +{ + "total": 1, + "timeTaken": 70, + "parameters": { + "term": "XAV05295I5", + "type": "contains", + "include": "properties", + "fromRecord": 0, + "pageSize": 10, + "property": [ + "FDA_UNII_Code" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C61305", + "name": "Sivifene", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true, + "properties": [ + { + "code": "P210", + "type": "CAS_Registry", + "value": "2675-35-6" + }, + { + "code": "P350", + "type": "Chemical_Formula", + "value": "C19H14N4O6" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "FDA" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "GDC" + }, + { + "code": "P319", + "type": "FDA_UNII_Code", + "value": "XAV05295I5" + }, + { + "code": "P366", + "type": "Legacy Concept Name", + "value": "A-007" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Sivifene" + }, + { + "code": "P399", + "type": "NCI_Drug_Dictionary_ID", + "value": "485274" + }, + { + "code": "P330", + "type": "PDQ_Closed_Trial_Search_ID", + "value": "485274" + }, + { + "code": "P329", + "type": "PDQ_Open_Trial_Search_ID", + "value": "485274" + }, + { + "code": "P106", + "type": "Semantic_Type", + "value": "Pharmacologic Substance" + }, + { + "code": "P207", + "type": "UMLS_CUI", + "value": "C0385861" + } + ] + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-subset.txt b/curl-examples/samples/find-concepts-by-search-subset.txt index c0d9a884..a9a20d7b 100644 --- a/curl-examples/samples/find-concepts-by-search-subset.txt +++ b/curl-examples/samples/find-concepts-by-search-subset.txt @@ -1,110 +1,110 @@ -{ - "total": 35, - "timeTaken": 46, - "parameters": { - "term": "immune", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 10, - "subset": [ - "C165258" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C3507", - "name": "Immune System Disorder", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3446", - "name": "Primary Immune Thrombocytopenia", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C152105", - "name": "Inborn Error of Immunity", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C2986", - "name": "Type 1 Diabetes Mellitus", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C3962", - "name": "Adenosine Deaminase Deficiency", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C26725", - "name": "Common Variable Immunodeficiency", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C198610", - "name": "VISS Syndrome", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C118844", - "name": "Ectodermal Dysplasia and Immunodeficiency", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3472", - "name": "Severe Combined Immunodeficiency", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C129867", - "name": "Growth Hormone Insensitivity Syndrome", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -} - +{ + "total": 35, + "timeTaken": 52, + "parameters": { + "term": "immune", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 10, + "subset": [ + "C165258" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C3507", + "name": "Immune System Disorder", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3446", + "name": "Primary Immune Thrombocytopenia", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C152105", + "name": "Inborn Error of Immunity", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C2986", + "name": "Type 1 Diabetes Mellitus", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3962", + "name": "Adenosine Deaminase Deficiency", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C26725", + "name": "Common Variable Immunodeficiency", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C198610", + "name": "VISS Syndrome", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C118844", + "name": "Ectodermal Dysplasia and Immunodeficiency", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3472", + "name": "Severe Combined Immunodeficiency", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2887", + "name": "Ataxia Telangiectasia Syndrome", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-AND.txt b/curl-examples/samples/find-concepts-by-search-term-AND.txt index e88ecc52..8c64426e 100644 --- a/curl-examples/samples/find-concepts-by-search-term-AND.txt +++ b/curl-examples/samples/find-concepts-by-search-term-AND.txt @@ -1,62 +1,62 @@ -{ - "total": 11, - "timeTaken": 35, - "parameters": { - "term": "lentiginous melanoma", - "type": "AND", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C48622", - "name": "Mucosal Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C165535", - "name": "Unresectable Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C4022", - "name": "Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C175435", - "name": "Recurrent Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C179427", - "name": "Metastatic Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] -} - +{ + "total": 11, + "timeTaken": 46, + "parameters": { + "term": "lentiginous melanoma", + "type": "AND", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C48622", + "name": "Mucosal Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C165535", + "name": "Unresectable Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C4022", + "name": "Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C175435", + "name": "Recurrent Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179427", + "name": "Metastatic Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-C3224.txt b/curl-examples/samples/find-concepts-by-search-term-C3224.txt index 86419d2a..74a79ab3 100644 --- a/curl-examples/samples/find-concepts-by-search-term-C3224.txt +++ b/curl-examples/samples/find-concepts-by-search-term-C3224.txt @@ -1,26 +1,26 @@ -{ - "total": 1, - "timeTaken": 31, - "parameters": { - "term": "C3224", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 10, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -} - +{ + "total": 1, + "timeTaken": 124, + "parameters": { + "term": "C3224", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 10, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-OR.txt b/curl-examples/samples/find-concepts-by-search-term-OR.txt index 16533705..58e5039d 100644 --- a/curl-examples/samples/find-concepts-by-search-term-OR.txt +++ b/curl-examples/samples/find-concepts-by-search-term-OR.txt @@ -1,62 +1,62 @@ -{ - "total": 1394, - "timeTaken": 44, - "parameters": { - "term": "lentiginous melanoma", - "type": "OR", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C48622", - "name": "Mucosal Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C165535", - "name": "Unresectable Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C4022", - "name": "Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C175435", - "name": "Recurrent Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C179427", - "name": "Metastatic Acral Lentiginous Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] -} - +{ + "total": 1482, + "timeTaken": 67, + "parameters": { + "term": "lentiginous melanoma", + "type": "OR", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C48622", + "name": "Mucosal Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C165535", + "name": "Unresectable Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C4022", + "name": "Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C175435", + "name": "Recurrent Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179427", + "name": "Metastatic Acral Lentiginous Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-definition-nci.txt b/curl-examples/samples/find-concepts-by-search-term-definition-nci.txt index 1c154b67..8dbcf65e 100644 --- a/curl-examples/samples/find-concepts-by-search-term-definition-nci.txt +++ b/curl-examples/samples/find-concepts-by-search-term-definition-nci.txt @@ -1,65 +1,65 @@ -{ - "total": 1462, - "timeTaken": 46, - "parameters": { - "term": "melanoma", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "definitionSource": [ - "NCI" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C103113", - "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C157920", - "name": "Melanoma Surgery", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C1830", - "name": "Melanoma Theraccine", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C46091", - "name": "Melanoma Biomarker", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] -} - +{ + "total": 1558, + "timeTaken": 47, + "parameters": { + "term": "melanoma", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "definitionSource": [ + "NCI" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C103113", + "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C157920", + "name": "Melanoma Surgery", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C1830", + "name": "Melanoma Theraccine", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C46091", + "name": "Melanoma Biomarker", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-definition-type.txt b/curl-examples/samples/find-concepts-by-search-term-definition-type.txt index ee1749ca..bc627b0f 100644 --- a/curl-examples/samples/find-concepts-by-search-term-definition-type.txt +++ b/curl-examples/samples/find-concepts-by-search-term-definition-type.txt @@ -1,65 +1,65 @@ -{ - "total": 1462, - "timeTaken": 40, - "parameters": { - "term": "melanoma", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "definitionType": [ - "DEFINITION" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C103113", - "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C157920", - "name": "Melanoma Surgery", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C1830", - "name": "Melanoma Theraccine", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C46091", - "name": "Melanoma Biomarker", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] -} - +{ + "total": 1558, + "timeTaken": 36, + "parameters": { + "term": "melanoma", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "definitionType": [ + "DEFINITION" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C103113", + "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C157920", + "name": "Melanoma Surgery", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C1830", + "name": "Melanoma Theraccine", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C46091", + "name": "Melanoma Biomarker", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-fuzzy.txt b/curl-examples/samples/find-concepts-by-search-term-fuzzy.txt index f93204a5..89989f93 100644 --- a/curl-examples/samples/find-concepts-by-search-term-fuzzy.txt +++ b/curl-examples/samples/find-concepts-by-search-term-fuzzy.txt @@ -1,62 +1,62 @@ -{ - "total": 1509, - "timeTaken": 47, - "parameters": { - "term": "enzymi", - "type": "fuzzy", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C16554", - "name": "Enzyme", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C41564", - "name": "Enzyme Induction", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C40500", - "name": "Enzyme Uncoupling", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C17455", - "name": "Enzyme Immunoassay", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C471", - "name": "Enzyme Inhibitor", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -} - +{ + "total": 1529, + "timeTaken": 55, + "parameters": { + "term": "enzymi", + "type": "fuzzy", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C16554", + "name": "Enzyme", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C17455", + "name": "Enzyme Immunoassay", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C471", + "name": "Enzyme Inhibitor", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C40578", + "name": "Enzyme Reactivation", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C21281", + "name": "Enzyme Gene", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-highlights.txt b/curl-examples/samples/find-concepts-by-search-term-highlights.txt index 3f70656c..39aef7a5 100644 --- a/curl-examples/samples/find-concepts-by-search-term-highlights.txt +++ b/curl-examples/samples/find-concepts-by-search-term-highlights.txt @@ -1,273 +1,272 @@ -{ - "total": 1531, - "timeTaken": 44, - "parameters": { - "term": "melanoma", - "type": "contains", - "include": "synonyms,highlights", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "highlight": "Melanoma", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "synonyms": [ - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "caDSR" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "MELANOMA, MALIGNANT", - "termType": "PT", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "Cellosaurus" - }, - { - "name": "Malignant Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CPTAC" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTEP", - "code": "10053571", - "subSource": "SDC" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "DN", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "Melanoma, NOS", - "termType": "SY", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "melanoma", - "highlight": "melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI-GLOSS", - "code": "CDR0000045135" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NICHD" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "type": "Display_Name" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "type": "Preferred_Name" - } - ] - }, - { - "code": "C91477", - "name": "Melanoma Pathway", - "terminology": "ncit", - "version": "25.02d", - "highlight": "Melanoma Pathway", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true, - "synonyms": [ - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "KEGG" - }, - { - "name": "Melanoma Pathway", - "highlight": "Melanoma Pathway", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma Pathway", - "highlight": "Melanoma Pathway", - "type": "Preferred_Name" - } - ] - }, - { - "code": "C21790", - "name": "Mouse Melanoma", - "terminology": "ncit", - "version": "25.02d", - "highlight": "Mouse Melanoma", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "synonyms": [ - { - "name": "Mouse Melanoma", - "highlight": "Mouse Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "Cellosaurus" - }, - { - "name": "Mouse Melanoma", - "highlight": "Mouse Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "highlight": "Melanoma", - "type": "Display_Name" - }, - { - "name": "Mouse Melanoma", - "highlight": "Mouse Melanoma", - "type": "Preferred_Name" - } - ] - }, - { - "code": "C103113", - "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "terminology": "ncit", - "version": "25.02d", - "highlight": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true, - "synonyms": [ - { - "name": "Melanoma", - "highlight": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTEP", - "subSource": "SDC" - }, - { - "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "highlight": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "NCI CTEP Simple Disease Classification Melanoma Sub-Category Terminology", - "highlight": "NCI CTEP Simple Disease Classification Melanoma Sub-Category Terminology", - "termType": "SY", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "highlight": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "type": "Preferred_Name" - } - ] - }, - { - "code": "C2517", - "name": "Melanoma Vaccine", - "terminology": "ncit", - "version": "25.02d", - "highlight": "Melanoma Vaccine", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "synonyms": [ - { - "name": "melanoma vaccine", - "highlight": "melanoma vaccine", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI-GLOSS", - "code": "CDR0000046293" - }, - { - "name": "Melanoma Vaccine", - "highlight": "Melanoma Vaccine", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma Vaccine", - "highlight": "Melanoma Vaccine", - "type": "Preferred_Name" - } - ] - } - ] -} - +{ + "total": 1625, + "timeTaken": 55, + "parameters": { + "term": "melanoma", + "type": "contains", + "include": "synonyms,highlights", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "highlight": "Melanoma", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "synonyms": [ + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "caDSR" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "MELANOMA, MALIGNANT", + "termType": "PT", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "Cellosaurus" + }, + { + "name": "Malignant Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CPTAC" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTEP", + "code": "10053571", + "subSource": "SDC" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "DN", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "Melanoma, NOS", + "termType": "SY", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "melanoma", + "highlight": "melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI-GLOSS", + "code": "CDR0000045135" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NICHD" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "type": "Display_Name" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "type": "Preferred_Name" + } + ] + }, + { + "code": "C91477", + "name": "Melanoma Pathway", + "terminology": "ncit", + "version": "25.07d", + "highlight": "Melanoma Pathway", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true, + "synonyms": [ + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "KEGG" + }, + { + "name": "Melanoma Pathway", + "highlight": "Melanoma Pathway", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma Pathway", + "highlight": "Melanoma Pathway", + "type": "Preferred_Name" + } + ] + }, + { + "code": "C21790", + "name": "Mouse Melanoma", + "terminology": "ncit", + "version": "25.07d", + "highlight": "Mouse Melanoma", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "synonyms": [ + { + "name": "Mouse Melanoma", + "highlight": "Mouse Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "Cellosaurus" + }, + { + "name": "Mouse Melanoma", + "highlight": "Mouse Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "highlight": "Melanoma", + "type": "Display_Name" + }, + { + "name": "Mouse Melanoma", + "highlight": "Mouse Melanoma", + "type": "Preferred_Name" + } + ] + }, + { + "code": "C103113", + "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "terminology": "ncit", + "version": "25.07d", + "highlight": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true, + "synonyms": [ + { + "name": "Melanoma", + "highlight": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTEP", + "subSource": "SDC" + }, + { + "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "highlight": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "NCI CTEP Simple Disease Classification Melanoma Sub-Category Terminology", + "highlight": "NCI CTEP Simple Disease Classification Melanoma Sub-Category Terminology", + "termType": "SY", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "highlight": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "type": "Preferred_Name" + } + ] + }, + { + "code": "C157920", + "name": "Melanoma Surgery", + "terminology": "ncit", + "version": "25.07d", + "highlight": "Melanoma Surgery", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true, + "synonyms": [ + { + "name": "Surgery for Melanoma", + "highlight": "Surgery for Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CPTAC" + }, + { + "name": "Melanoma Surgery", + "highlight": "Melanoma Surgery", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma Surgery", + "highlight": "Melanoma Surgery", + "type": "Preferred_Name" + } + ] + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-match.txt b/curl-examples/samples/find-concepts-by-search-term-match.txt index ccd45e9e..c80171d0 100644 --- a/curl-examples/samples/find-concepts-by-search-term-match.txt +++ b/curl-examples/samples/find-concepts-by-search-term-match.txt @@ -1,26 +1,26 @@ -{ - "total": 1, - "timeTaken": 29, - "parameters": { - "term": "Lung Carcinoma", - "type": "match", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C4878", - "name": "Lung Carcinoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -} - +{ + "total": 1, + "timeTaken": 49, + "parameters": { + "term": "Lung Carcinoma", + "type": "match", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C4878", + "name": "Lung Carcinoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-nci-pt.txt b/curl-examples/samples/find-concepts-by-search-term-nci-pt.txt index 51bf8f3a..f1ddf33e 100644 --- a/curl-examples/samples/find-concepts-by-search-term-nci-pt.txt +++ b/curl-examples/samples/find-concepts-by-search-term-nci-pt.txt @@ -1,110 +1,110 @@ -{ - "total": 14, - "timeTaken": 48, - "parameters": { - "term": "dsDNA", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 10, - "synonymSource": [ - "NCI" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C449", - "name": "DNA", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C25832", - "name": "DNA Double Strand Break", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C14348", - "name": "Double Stranded DNA Virus", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C114565", - "name": "Anti-ds DNA Antibody", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C211596", - "name": "Anti-ds DNA Antibody Positive", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C151958", - "name": "HPV16-E7-T512", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C20064", - "name": "Conformation Dependent Mutation Detection", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C148186", - "name": "TALEN-edited HPV16/18 E6/E7 Plasmid", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C16517", - "name": "DNA Helicase", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C158432", - "name": "PicoGreen Dye", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] -} - +{ + "total": 14, + "timeTaken": 54, + "parameters": { + "term": "dsDNA", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 10, + "synonymSource": [ + "NCI" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C449", + "name": "DNA", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C25832", + "name": "DNA Double Strand Break", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C14348", + "name": "Double Stranded DNA Virus", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C114565", + "name": "Anti-ds DNA Antibody", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C211596", + "name": "Anti-ds DNA Antibody Positive", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C151958", + "name": "HPV16-E7-T512", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C20064", + "name": "Conformation Dependent Mutation Detection", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C148186", + "name": "TALEN-edited HPV16/18 E6/E7 Plasmid", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C16517", + "name": "DNA Helicase", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C158432", + "name": "PicoGreen Dye", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-phrase.txt b/curl-examples/samples/find-concepts-by-search-term-phrase.txt index 6a85c9c4..2e340c7c 100644 --- a/curl-examples/samples/find-concepts-by-search-term-phrase.txt +++ b/curl-examples/samples/find-concepts-by-search-term-phrase.txt @@ -1,62 +1,62 @@ -{ - "total": 78, - "timeTaken": 33, - "parameters": { - "term": "malignant melanoma", - "type": "phrase", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C16835", - "name": "Experimental Malignant Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C60451", - "name": "Rat Malignant Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C194143", - "name": "Malignant Melanoma of Lip", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C64123", - "name": "Malignant Melanoma of the Rat Skin", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C64124", - "name": "Melanotic Malignant Melanoma of the Rat Skin", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] -} - +{ + "total": 78, + "timeTaken": 47, + "parameters": { + "term": "malignant melanoma", + "type": "phrase", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C16835", + "name": "Experimental Malignant Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C60451", + "name": "Rat Malignant Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C194143", + "name": "Malignant Melanoma of Lip", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C64123", + "name": "Malignant Melanoma of the Rat Skin", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C16317", + "name": "B16 Malignant Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-retired-concepts.txt b/curl-examples/samples/find-concepts-by-search-term-retired-concepts.txt index 7c7168db..cd4f4eb2 100644 --- a/curl-examples/samples/find-concepts-by-search-term-retired-concepts.txt +++ b/curl-examples/samples/find-concepts-by-search-term-retired-concepts.txt @@ -1,65 +1,65 @@ -{ - "total": 17, - "timeTaken": 45, - "parameters": { - "term": "melanoma", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "conceptStatus": [ - "Retired_Concept" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C4224", - "name": "Melanoma In Situ", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "Retired_Concept", - "leaf": true, - "active": false - }, - { - "code": "C5505", - "name": "Central Nervous System Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "Retired_Concept", - "leaf": true, - "active": false - }, - { - "code": "C9342", - "name": "Spindle Cell Intraocular Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "Retired_Concept", - "leaf": true, - "active": false - }, - { - "code": "C60471", - "name": "Rat Malignant Uveal Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "Retired_Concept", - "leaf": true, - "active": false - }, - { - "code": "C37815", - "name": "Incomplete Freund's Adjuvant/Peptide 946 Melanoma Vaccine/Tetanus Peptide Melanoma Vaccine", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "Retired_Concept", - "leaf": true, - "active": false - } - ] -} - +{ + "total": 17, + "timeTaken": 52, + "parameters": { + "term": "melanoma", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "conceptStatus": [ + "Retired_Concept" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C4224", + "name": "Melanoma In Situ", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "Retired_Concept", + "leaf": true, + "active": false + }, + { + "code": "C5505", + "name": "Central Nervous System Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "Retired_Concept", + "leaf": true, + "active": false + }, + { + "code": "C60471", + "name": "Rat Malignant Uveal Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "Retired_Concept", + "leaf": true, + "active": false + }, + { + "code": "C9342", + "name": "Spindle Cell Intraocular Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "Retired_Concept", + "leaf": true, + "active": false + }, + { + "code": "C37815", + "name": "Incomplete Freund's Adjuvant/Peptide 946 Melanoma Vaccine/Tetanus Peptide Melanoma Vaccine", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "Retired_Concept", + "leaf": true, + "active": false + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-startsWith.txt b/curl-examples/samples/find-concepts-by-search-term-startsWith.txt index cf3a90bc..c088955e 100644 --- a/curl-examples/samples/find-concepts-by-search-term-startsWith.txt +++ b/curl-examples/samples/find-concepts-by-search-term-startsWith.txt @@ -1,62 +1,62 @@ -{ - "total": 49, - "timeTaken": 32, - "parameters": { - "term": "enzyme", - "type": "startsWith", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C16554", - "name": "Enzyme", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C147466", - "name": "Enzyme-Linked Lectin Assay", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C156467", - "name": "Enzyme Unit per Meter Squared", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C208420", - "name": "Enzyme Unit per 10 Billion Cells", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C40500", - "name": "Enzyme Uncoupling", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } - ] -} - +{ + "total": 49, + "timeTaken": 59, + "parameters": { + "term": "enzyme", + "type": "startsWith", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C16554", + "name": "Enzyme", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C154856", + "name": "Enzyme Unit per Gram Hemoglobin", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C17455", + "name": "Enzyme Immunoassay", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C208421", + "name": "Enzyme Unit per 10 Billion", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C21281", + "name": "Enzyme Gene", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term-synonym-type.txt b/curl-examples/samples/find-concepts-by-search-term-synonym-type.txt index 7d5d5d54..eb72f3a1 100644 --- a/curl-examples/samples/find-concepts-by-search-term-synonym-type.txt +++ b/curl-examples/samples/find-concepts-by-search-term-synonym-type.txt @@ -1,110 +1,110 @@ -{ - "total": 14, - "timeTaken": 30, - "parameters": { - "term": "dsDNA", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 10, - "synonymType": [ - "FULL_SYN" - ], - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C449", - "name": "DNA", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C25832", - "name": "DNA Double Strand Break", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C14348", - "name": "Double Stranded DNA Virus", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C114565", - "name": "Anti-ds DNA Antibody", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C211596", - "name": "Anti-ds DNA Antibody Positive", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C151958", - "name": "HPV16-E7-T512", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C20064", - "name": "Conformation Dependent Mutation Detection", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C148186", - "name": "TALEN-edited HPV16/18 E6/E7 Plasmid", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C158432", - "name": "PicoGreen Dye", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C16517", - "name": "DNA Helicase", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -} - +{ + "total": 14, + "timeTaken": 43, + "parameters": { + "term": "dsDNA", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 10, + "synonymType": [ + "FULL_SYN" + ], + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C449", + "name": "DNA", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C25832", + "name": "DNA Double Strand Break", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C14348", + "name": "Double Stranded DNA Virus", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C114565", + "name": "Anti-ds DNA Antibody", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C211596", + "name": "Anti-ds DNA Antibody Positive", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C151958", + "name": "HPV16-E7-T512", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C20064", + "name": "Conformation Dependent Mutation Detection", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C148186", + "name": "TALEN-edited HPV16/18 E6/E7 Plasmid", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C158432", + "name": "PicoGreen Dye", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C16517", + "name": "DNA Helicase", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-concepts-by-search-term.txt b/curl-examples/samples/find-concepts-by-search-term.txt index 0a0ff79d..f1c874df 100644 --- a/curl-examples/samples/find-concepts-by-search-term.txt +++ b/curl-examples/samples/find-concepts-by-search-term.txt @@ -1,62 +1,62 @@ -{ - "total": 1531, - "timeTaken": 41, - "parameters": { - "term": "melanoma", - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5, - "terminology": [ - "ncit" - ] - }, - "concepts": [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C91477", - "name": "Melanoma Pathway", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C21790", - "name": "Mouse Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C103113", - "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C2517", - "name": "Melanoma Vaccine", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -} - +{ + "total": 1625, + "timeTaken": 41, + "parameters": { + "term": "melanoma", + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5, + "terminology": [ + "ncit" + ] + }, + "concepts": [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C91477", + "name": "Melanoma Pathway", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C21790", + "name": "Mouse Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C103113", + "name": "NCI CTEP SDC Melanoma Sub-Category Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C157920", + "name": "Melanoma Surgery", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/find-roots.txt b/curl-examples/samples/find-roots.txt index bad243b7..98165c2c 100644 --- a/curl-examples/samples/find-roots.txt +++ b/curl-examples/samples/find-roots.txt @@ -1,174 +1,174 @@ -[ - { - "code": "C12913", - "name": "Abnormal Cell", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C43431", - "name": "Activity", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C12219", - "name": "Anatomic Structure, System, or Substance", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20633", - "name": "Biochemical Pathway", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C17828", - "name": "Biological Process", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C12218", - "name": "Chemotherapy Regimen or Agent Combination", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20181", - "name": "Conceptual Entity", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20047", - "name": "Diagnostic or Prognostic Factor", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C1908", - "name": "Drug, Food, Chemical or Biomedical Material", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C22188", - "name": "Experimental Organism Anatomical Concept", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C22187", - "name": "Experimental Organism Diagnosis", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C16612", - "name": "Gene", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C26548", - "name": "Gene Product", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C97325", - "name": "Manufactured Object", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3910", - "name": "Molecular Abnormality", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C14250", - "name": "Organism", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C20189", - "name": "Property or Attribute", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C28428", - "name": "Retired Concept", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } -] - +[ + { + "code": "C12913", + "name": "Abnormal Cell", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C43431", + "name": "Activity", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C12219", + "name": "Anatomic Structure, System, or Substance", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20633", + "name": "Biochemical Pathway", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C17828", + "name": "Biological Process", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C12218", + "name": "Chemotherapy Regimen or Agent Combination", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20181", + "name": "Conceptual Entity", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20047", + "name": "Diagnostic or Prognostic Factor", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C1908", + "name": "Drug, Food, Chemical or Biomedical Material", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C22188", + "name": "Experimental Organism Anatomical Concept", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C22187", + "name": "Experimental Organism Diagnosis", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C16612", + "name": "Gene", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C26548", + "name": "Gene Product", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C97325", + "name": "Manufactured Object", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3910", + "name": "Molecular Abnormality", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C14250", + "name": "Organism", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C20189", + "name": "Property or Attribute", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C28428", + "name": "Retired Concept", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } +] + diff --git a/curl-examples/samples/get-all-subsets.txt b/curl-examples/samples/get-all-subsets.txt index 0bd2deb5..7fe3e2df 100644 --- a/curl-examples/samples/get-all-subsets.txt +++ b/curl-examples/samples/get-all-subsets.txt @@ -1,19770 +1,20720 @@ -[ - { - "code": "C167405", - "name": "ACC/AHA EHR Terminology", - "terminology": "ncit", - "version": "25.02d", - "children": [ - { - "code": "C191200", - "name": "ACC/AHA Cardiovascular and Noncardiovascular Complications of COVID-19 Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191389", - "name": "Appendix 10: End-of-Life Management Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191382", - "name": "Appendix 3: COVID-19 Diagnosis Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191383", - "name": "Appendix 4: COVID-19 Cardiovascular Complications Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191396", - "name": "Acute Cardiovascular Complications Related to COVID-19 Infection Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191397", - "name": "Cardiovascular Mortality During Acute COVID-19 Infection Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191403", - "name": "Postacute Cardiovascular Sequelae of SARS-CoV-2 Infection or Long-Term Cardiovascular Complications of COVID-19 Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C191384", - "name": "Appendix 5: COVID-19 Noncardiovascular Complications Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191385", - "name": "Appendix 6: Symptoms and Signs Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191398", - "name": "Current Symptoms and Signs: Clinical Symptoms Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191402", - "name": "Physical Examination Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C191386", - "name": "Appendix 7: Diagnostic Procedures Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191387", - "name": "Appendix 8: Pharmacological Therapy Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191404", - "name": "Therapies for COVID-19 Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191405", - "name": "Therapies for Preexisting Cardiovascular Disease (Patient Taking Prior to Admission) Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191406", - "name": "Therapies for Supportive Care During COVID-19 Infection Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C191388", - "name": "Appendix 9: Therapeutic and Supportive Procedures for COVID-19 Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C191399", - "name": "Electrophysiological Procedures Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191400", - "name": "Invasive Coronary/Vascular/Neurovascular Revascularization Treatment Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C191401", - "name": "Mechanical Support Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - } - ] - }, - { - "code": "C167409", - "name": "ACC/AHA Pediatric and Congenital Cardiology EHR Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/ACC-AHA_EHR_Terminology", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C157225", - "name": "CBDD Terminology", - "terminology": "ncit", - "version": "25.02d", - "children": [ - { - "code": "C168696", - "name": "CBDD Process Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CBDD", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C168697", - "name": "CBDD Structure Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CBDD", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C192842", - "name": "Cellosaurus Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/Cellosaurus", - "children": [ - { - "code": "C165258", - "name": "Cellosaurus Disease Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/Cellosaurus", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C192843", - "name": "Cellosaurus Resistance and Transformant Physical Factor Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/Cellosaurus", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C177281", - "name": "Childhood Cancer Predisposition Study Terminology", - "terminology": "ncit", - "version": "25.02d", - "children": [ - { - "code": "C177516", - "name": "CCPS Disease Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CCPS", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C177517", - "name": "CCPS Genetics Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CCPS", - "conceptStatus": "DEFAULT", - "active": true - } - ] - }, - { - "code": "C61410", - "name": "Clinical Data Interchange Standards Consortium Terminology", - "terminology": "ncit", - "version": "25.02d", - "children": [ - { - "code": "C81222", - "name": "CDISC ADaM Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true, - "children": [ - { - "code": "C208382", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C208381", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204411", - "name": "CDISC ADaM Analysis Stratum Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187458", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187457", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81223", - "name": "CDISC ADaM Date Imputation Flag Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81224", - "name": "CDISC ADaM Derivation Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C172334", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C172335", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C158114", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C158115", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187456", - "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 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"conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C193277", - "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81225", - "name": "CDISC ADaM Parameter Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C165644", - "name": "CDISC ADaM Pool for Integration Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C124296", - "name": "CDISC ADaM Subject Trial Status Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": 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+ "active": true + }, + { + "code": "C179489", + "name": "OS Off Protocol Therapy/Study Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179485", + "name": "OS Patient Reported Outcomes Metadata Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179483", + "name": "OS Radiation Therapy Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179498", + "name": "OS Secondary Malignant Neoplasm Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179484", + "name": "OS Subject Characteristics Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179480", + "name": "OS Subject Response Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179529", + "name": "OS Survival Characteristics Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179531", + "name": "OS Total Dose Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179481", + "name": "OS Tumor Assessment Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179532", + "name": "OS Vitals Table", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + } + ] + } + ] + }, + { + "code": "C165276", + "name": "Pediatric Terminologies", + "terminology": "ncit", + "version": "25.07d", + "leaf": false, + "children": [ + { + "code": "C155946", + "name": "INC Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C162989", + "name": "INC Demographic and Maternal Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C154914", + "name": "INC-MedDRA Neonatal Adverse Events Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C90259", + "name": "NICHD Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C74456", + "name": "CDISC SDTM Anatomical Location Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C99074", + "name": "CDISC SDTM Directionality Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C99073", + "name": "CDISC SDTM Laterality Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C99147", + "name": "Neonatal Research Network Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C97150", + "name": "Neurological Development Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C89506", + "name": "Newborn Screening Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C118464", + "name": "Pediatric Adverse Events Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C189762", + "name": "Pediatric Adverse Events Terminology Mapped to MedDRA", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C118467", + "name": "Pediatric Endocrinology Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C132009", + "name": "Pediatric Hematology-Oncology Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C96388", + "name": "Pediatric Immunization Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C128453", + "name": "Pediatric Infectious Disease Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C122636", + "name": "Pediatric Medical Device Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C123272", + "name": "Pediatric Nephrology Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C118468", + "name": "Pediatric Rheumatology Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C118466", + "name": "Perinatal Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C213298", + "name": "Pediatric Oncology Molecular Target Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C213304", + "name": "Pediatric Oncology Biomarkers/Targets Associated with Other Relevant Evidence", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C213303", + "name": "Pediatric Oncology Immunotherapeutic Target Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C213299", + "name": "Pediatric Oncology Molecular Abnormality Target Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C213300", + "name": "Pediatric Oncology Target Genes/Proteins Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C213301", + "name": "Pediatric Oncology Target Molecular Abnormalities Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C213302", + "name": "Pediatric Oncology Target Cell Lineage Determinant Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + } + ] + }, + { + "code": "C160950", + "name": "Pharmacotherapy Regimens", + "terminology": "ncit", + "version": "25.07d", + "leaf": false, + "children": [ + { + "code": "C160952", + "name": "Multi-agent Therapeutic Regimens", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C160951", + "name": "Single-agent Therapeutic Regimens", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C128613", + "name": "PI-RADS Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": true + }, + { + "code": "C167077", + "name": "SEER Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": false, + "children": [ + { + "code": "C167078", + "name": "SEER Rx Interactive Antineoplastic Drugs Database", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "children": [ + { + "code": "C167080", + "name": "SEER Rx Interactive Antineoplastic Drugs Database-Regimen", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + } + ] + }, + { + "code": "C178701", + "name": "SeroNet Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": false, + "children": [ + { + "code": "C178724", + "name": "SeroNet Aliquot Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178723", + "name": "SeroNet Assay Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178722", + "name": "SeroNet Assay Target Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178721", + "name": "SeroNet Biospecimen Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178720", + "name": "SeroNet Confirmatory Test Result", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178727", + "name": "SeroNet Consumable Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178725", + "name": "SeroNet Equipment Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178719", + "name": "SeroNet Prior Test Result", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178726", + "name": "SeroNet Reagent Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C178718", + "name": "SeroNet Research Participant Metadata", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C179059", + "name": "SeroNet Schema Details", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C189083", + "name": "SeroNet Study Descriptors", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] + }, + { + "code": "C198975", + "name": "UBERON Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": true + }, + { + "code": "C67567", + "name": "UCUM Terminology", + "terminology": "ncit", + "version": "25.07d", + "leaf": true + } +] + diff --git a/curl-examples/samples/get-association-with-code.txt b/curl-examples/samples/get-association-with-code.txt index d510c02b..93ef844b 100644 --- a/curl-examples/samples/get-association-with-code.txt +++ b/curl-examples/samples/get-association-with-code.txt @@ -1,29 +1,29 @@ -{ - "code": "A16", - "name": "Has_INC_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_INC_Parent", - "type": "FULL_SYN" - }, - { - "name": "Has_INC_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association created to allow the source INC to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which they are the contributing source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "A16", + "name": "Has_INC_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_INC_Parent", + "type": "FULL_SYN" + }, + { + "name": "Has_INC_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association created to allow the source INC to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which they are the contributing source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-association-with-label.txt b/curl-examples/samples/get-association-with-label.txt index d510c02b..93ef844b 100644 --- a/curl-examples/samples/get-association-with-label.txt +++ b/curl-examples/samples/get-association-with-label.txt @@ -1,29 +1,29 @@ -{ - "code": "A16", - "name": "Has_INC_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_INC_Parent", - "type": "FULL_SYN" - }, - { - "name": "Has_INC_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association created to allow the source INC to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which they are the contributing source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "A16", + "name": "Has_INC_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_INC_Parent", + "type": "FULL_SYN" + }, + { + "name": "Has_INC_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association created to allow the source INC to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which they are the contributing source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-associations-with-code-list.txt b/curl-examples/samples/get-associations-with-code-list.txt index c7bd6b06..49ae2c9c 100644 --- a/curl-examples/samples/get-associations-with-code-list.txt +++ b/curl-examples/samples/get-associations-with-code-list.txt @@ -1,99 +1,99 @@ -[ - { - "code": "A1", - "name": "Role_Has_Domain", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Domain", - "type": "Display_Name" - }, - { - "name": "Role_Has_Domain", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Domain", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the parent of the branch encompassing a role's domain.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A2", - "name": "Role_Has_Range", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Range", - "type": "Display_Name" - }, - { - "name": "Role_Has_Range", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Range", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the parent of the branch encompassing the role's range.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A3", - "name": "Role_Has_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Parent", - "type": "Display_Name" - }, - { - "name": "Role_Has_Parent", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies that a role exists as part of a role hierarchy and specifies the role's parent, the role that this role specializes.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "A1", + "name": "Role_Has_Domain", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Domain", + "type": "Display_Name" + }, + { + "name": "Role_Has_Domain", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Domain", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the parent of the branch encompassing a role's domain.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A2", + "name": "Role_Has_Range", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Range", + "type": "Display_Name" + }, + { + "name": "Role_Has_Range", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Range", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the parent of the branch encompassing the role's range.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A3", + "name": "Role_Has_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Parent", + "type": "Display_Name" + }, + { + "name": "Role_Has_Parent", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies that a role exists as part of a role hierarchy and specifies the role's parent, the role that this role specializes.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-associations-with-label-list.txt b/curl-examples/samples/get-associations-with-label-list.txt index c7bd6b06..49ae2c9c 100644 --- a/curl-examples/samples/get-associations-with-label-list.txt +++ b/curl-examples/samples/get-associations-with-label-list.txt @@ -1,99 +1,99 @@ -[ - { - "code": "A1", - "name": "Role_Has_Domain", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Domain", - "type": "Display_Name" - }, - { - "name": "Role_Has_Domain", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Domain", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the parent of the branch encompassing a role's domain.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A2", - "name": "Role_Has_Range", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Range", - "type": "Display_Name" - }, - { - "name": "Role_Has_Range", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Range", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the parent of the branch encompassing the role's range.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A3", - "name": "Role_Has_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Parent", - "type": "Display_Name" - }, - { - "name": "Role_Has_Parent", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies that a role exists as part of a role hierarchy and specifies the role's parent, the role that this role specializes.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "A1", + "name": "Role_Has_Domain", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Domain", + "type": "Display_Name" + }, + { + "name": "Role_Has_Domain", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Domain", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the parent of the branch encompassing a role's domain.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A2", + "name": "Role_Has_Range", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Range", + "type": "Display_Name" + }, + { + "name": "Role_Has_Range", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Range", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the parent of the branch encompassing the role's range.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A3", + "name": "Role_Has_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Parent", + "type": "Display_Name" + }, + { + "name": "Role_Has_Parent", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies that a role exists as part of a role hierarchy and specifies the role's parent, the role that this role specializes.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-associations-with-summary.txt b/curl-examples/samples/get-associations-with-summary.txt index bc95e845..dda9e0ad 100644 --- a/curl-examples/samples/get-associations-with-summary.txt +++ b/curl-examples/samples/get-associations-with-summary.txt @@ -1,1363 +1,1363 @@ -[ - { - "code": "A1", - "name": "Role_Has_Domain", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Domain", - "type": "Display_Name" - }, - { - "name": "Role_Has_Domain", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Domain", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the parent of the branch encompassing a role's domain.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A12", - "name": "Has_Data_Element", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Data Element", - "type": "Display_Name" - }, - { - "name": "Has_Data_Element", - "type": "FULL_SYN" - }, - { - "name": "Has_Data_Element", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association created to relate a data element concept to the codelist term that is used to bundle its subset of valid value concepts.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A13", - "name": "Related_To_Genetic_Biomarker", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Related_To_Genetic_Biomarker", - "type": "FULL_SYN" - }, - { - "name": "Related_To_Genetic_Biomarker", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that indicates that a finding or lab test is related to a gene, possibly through a variant or product.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A14", - "name": "Neoplasm_Has_Special_Category", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Neoplasm_Has_Special_Category", - "type": "FULL_SYN" - }, - { - "name": "Neoplasm_Has_Special_Category", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that indicates that a neoplastic disease can have the characteristics defined by a Neoplasm by Special Category concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A15", - "name": "Has_CTCAE_5_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_CTCAE_5_Parent", - "type": "FULL_SYN" - }, - { - "name": "Has_CTCAE_5_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association created to allow the source CTCAE 5.0 to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which CTCAE is the contributing source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A16", - "name": "Has_INC_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_INC_Parent", - "type": "FULL_SYN" - }, - { - "name": "Has_INC_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association created to allow the source INC to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which they are the contributing source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A17", - "name": "Has_Pharmaceutical_State_Of_Matter", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_Pharmaceutical_State_Of_Matter", - "type": "FULL_SYN" - }, - { - "name": "State of Matter", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_State_Of_Matter", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the physical conditions describing the molecular form of a product. The target value should belong to the EDQM-HC State of Matter Terminology.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A18", - "name": "Has_Pharmaceutical_Basic_Dose_Form", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Basic Dose Form", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_Basic_Dose_Form", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_Basic_Dose_Form", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the category of the pharmaceutical dose form, used to group together related pharmaceutical dose forms. The target value should belong to the EDQM-HC Basic Dose Form Terminology.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A19", - "name": "Has_Pharmaceutical_Administration_Method", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Administration Method", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_Administration_Method", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_Administration_Method", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the methods by which a pharmaceutical product is intended to be administered to the patient. The target value should belong to the EDQM-HC Administration Method Terminology.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A2", - "name": "Role_Has_Range", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Range", - "type": "Display_Name" - }, - { - "name": "Role_Has_Range", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Range", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the parent of the branch encompassing the role's range.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A20", - "name": "Has_Pharmaceutical_Intended_Site", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_Pharmaceutical_Intended_Site", - "type": "FULL_SYN" - }, - { - "name": "Intended Site", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_Intended_Site", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the general body sites at which a pharmaceutical product is intended to be administered. The target value should belong to the EDQM-HC Intended Site of Administration Terminology.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A21", - "name": "Has_Pharmaceutical_Release_Characteristics", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_Pharmaceutical_Release_Characteristics", - "type": "FULL_SYN" - }, - { - "name": "Release Characteristics", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_Release_Characteristics", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the timing by which an active ingredient is made available in the body after administration of the pharmaceutical product, in comparison with a conventional, direct release of the active ingredient. The target value should belong to the EDQM-HC Release Characteristics Terminology.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A22", - "name": "Has_Pharmaceutical_Transformation", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_Pharmaceutical_Transformation", - "type": "FULL_SYN" - }, - { - "name": "Transformation", - "type": "FULL_SYN" - }, - { - "name": "Has_Pharmaceutical_Transformation", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the procedures that are carried out in order to convert a manufactured item that requires such a procedure into a pharmaceutical product. The target value should belong to the EDQM-HC Transformation Terminology.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A23", - "name": "Has_PCDC_Data_Type", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PCDC_Data_Type", - "type": "FULL_SYN" - }, - { - "name": "Has_PCDC_Data_Type", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies one of three data types for a particular variable, String, Code or Number.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A24", - "name": "Is_PCDC_AML_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is_PCDC_AML_Authorized_Value_For_Variable", - "type": "FULL_SYN" - }, - { - "name": "Is_PCDC_AML_Authorized_Value_For_Variable", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that indicates a PCDC AML concept is an Authorized Value for a PCDC AML Variable concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A25", - "name": "Value_Set_Is_Paired_With", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Value_Set_Is_Paired_With", - "type": "FULL_SYN" - }, - { - "name": "Value_Set_Is_Paired_With", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies the paired 'Test or Parameter Name' codelist that goes with the 'Test or Parameter Code' codelist. This association uni-directionally points from a Test/Parameter Code Codelist to the Test/Parameter Name Codelist.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A26", - "name": "Has_PCDC_AML_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PCDC_AML_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_PCDC_AML_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which PCDC AML Authorized Values are possible for a specific Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A27", - "name": "Has_CTDC_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_CTDC_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_CTDC_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association connecting a CTDC Property concept to its dedicated value concept(s).", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A28", - "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", - "type": "FULL_SYN" - }, - { - "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that indicates a PCDC EWS concept is an Authorized Value for a specific PCDC EWS Variable concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A29", - "name": "Has_PCDC_EWS_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PCDC_EWS_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_PCDC_EWS_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which Authorized Values are possible for a specific PCDC EWS Variable concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A3", - "name": "Role_Has_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Role Has Parent", - "type": "Display_Name" - }, - { - "name": "Role_Has_Parent", - "type": "FULL_SYN" - }, - { - "name": "Role_Has_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that specifies that a role exists as part of a role hierarchy and specifies the role's parent, the role that this role specializes.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A30", - "name": "Has_ICDC_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_ICDC_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_ICDC_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association connecting an ICDC Property concept to its dedicated value concept(s).", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A31", - "name": "Has_GDC_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_GDC_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_GDC_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that connects a concept representing a GDC property to its dedicated value concept(s).", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A32", - "name": "Is_Value_For_GDC_Property", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is_Value_For_GDC_Property", - "type": "FULL_SYN" - }, - { - "name": "Is_Value_For_GDC_Property", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that that connects a concept representing a GDC value to any associated GDC property concept(s).", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A33", - "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", - "type": "FULL_SYN" - }, - { - "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that indicates a concept is a dedicated Authorized Value concept for a specific PCDC GCT Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A34", - "name": "Has_PCDC_GCT_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PCDC_GCT_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_PCDC_GCT_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which Authorized Values are possible for a specific PCDC GCT Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A35", - "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", - "type": "FULL_SYN" - }, - { - "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that indicates a PCDC ALL concept is a Authorized Value for an PCDC ALL Variable concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A36", - "name": "Has_PCDC_ALL_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PCDC_ALL_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_PCDC_ALL_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which PCDC ALL Authorized Values are possible for a specific Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A37", - "name": "Has_SeroNet_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_SeroNet_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_SeroNet_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which Authorized Values are possible for a specific SeroNet Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A38", - "name": "Has_PCDC_OS_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PCDC_OS_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_PCDC_OS_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which Authorized Values are possible for a specific PCDC OS Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A39", - "name": "Has_PCDC_HL_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PCDC_HL_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_PCDC_HL_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which Authorized Values are possible for a specific PCDC HL Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A4", - "name": "Qualifier_Applies_To", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Qualifier Applies To", - "type": "Display_Name" - }, - { - "name": "Qualifier_Applies_To", - "type": "FULL_SYN" - }, - { - "name": "Qualifier_Applies_To", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that indicates the property or association that the qualifier is to be used with.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A40", - "name": "Has_DIPG_DMG_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_DIPG_DMG_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_DIPG_DMG_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which Authorized Values are possible for a specific DIPG/DMG Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A5", - "name": "Has_Salt_Form", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Salt Form", - "type": "Display_Name" - }, - { - "name": "Has_Salt_Form", - "type": "FULL_SYN" - }, - { - "name": "Has_Salt_Form", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that connects the base form of a drug with its various salt forms.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "USAGE NOTE: A salt form of a drug consists of 2 parts, one acidic and one basic group that are readily disassociated in liquid phase. Salt forms are either salts of strong acids and basic drugs (e.g. Atropine Sulfate, Cetirizine Hydrochloride) or salts of strong bases and acidic drugs (Allopurinol Sodium). This association is usually used in conjunction with Has_Free_Acid_Or_Base_Form." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A6", - "name": "Has_Free_Acid_Or_Base_Form", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Free Acid Or Base Form", - "type": "Display_Name" - }, - { - "name": "Has_Free_Acid_Or_Base_Form", - "type": "FULL_SYN" - }, - { - "name": "Has_Free_Acid_Or_Base_Form", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that connects the salt form of a drug with its free acid or free base.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "The free acid or base is responsible for the drug's therapeutic effect. Hence, the salt form of a drug has the same mechanism of action as the free acid or base form." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A7", - "name": "Has_Target", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Target", - "type": "Display_Name" - }, - { - "name": "Has_Target", - "type": "FULL_SYN" - }, - { - "name": "Has_Target", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that connects a drug or other agent to a clinically intended, molecular-scale target. The target value may be a gene, gene product, anatomic structure, cell, biological process, or other concept, where the effect of the agent on the target is thought to be of therapeutic, diagnostic, or other clinical relevance to a disease process. The effect is most often direct, as defined at a molecular scale, but may also be indirect and/or defined at a larger scale.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A8", - "name": "Concept_In_Subset", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Concept Is In Subset", - "type": "Display_Name" - }, - { - "name": "Concept_In_Subset", - "type": "FULL_SYN" - }, - { - "name": "Concept_In_Subset", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that connects the concept defining a particular terminology subset with concepts that belong to this subset.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A9", - "name": "Is_Related_To_Endogenous_Product", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Related To Endogenous Product", - "type": "Display_Name" - }, - { - "name": "Is_Related_To_Endogenous_Product", - "type": "FULL_SYN" - }, - { - "name": "Is_Related_To_Endogenous_Product", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that is asserted when there is a relationship or association between the therapeutic moiety and the endogenous gene product.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A42", - "name": "Has_OORO_PC_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_OORO_PC_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_OORO_PC_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association specifying the Values for a specific OORO Prostate Cancer (PC) Attribute.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A48", - "name": "Has_ACC-AHA_SARS2_Authorized_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_ACC-AHA_SARS2_Authorized_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_ACC-AHA_SARS2_Authorized_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association that shows which Authorized Values are possible for a specific ACC/AHA SARS2 Variable.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A49", - "name": "Has_PRO-CTCAE_Attribute", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PRO-CTCAE_Attribute", - "type": "FULL_SYN" - }, - { - "name": "Has_PRO-CTCAE_Attribute", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An indication that a PRO-CTCAE concept is associated with a PRO-CTCAE attribute.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A50", - "name": "Has_Ped-PRO-CTCAE_Attribute", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_Ped-PRO-CTCAE_Attribute", - "type": "FULL_SYN" - }, - { - "name": "Has_Ped-PRO-CTCAE_Attribute", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An indication that a Ped-PRO-CTCAE concept is associated with a Ped-PRO-CTCAE attribute.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A51", - "name": "Has_PRO-CTCAE_Attribute_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PRO-CTCAE_Attribute_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_PRO-CTCAE_Attribute_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An indication that a PRO-CTCAE attribute is associated with a PRO-CTCAE value.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A52", - "name": "Has_Ped-PRO-CTCAE_Attribute_Value", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_Ped-PRO-CTCAE_Attribute_Value", - "type": "FULL_SYN" - }, - { - "name": "Has_Ped-PRO-CTCAE_Attribute_Value", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An indication that a Ped-PRO-CTCAE attribute is associated with a Ped-PRO-CTCAE value.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A53", - "name": "Has_PRO-CTCAE_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_PRO-CTCAE_Parent", - "type": "FULL_SYN" - }, - { - "name": "Has_PRO-CTCAE_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association to assign a PRO-CTCAE parent to each concept with the intent of creating a hierarchy that includes only terms in which PRO-CTCAE is the contributing source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "A54", - "name": "Has_Ped-PRO-CTCAE_Parent", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has_Ped-PRO-CTCAE_Parent", - "type": "FULL_SYN" - }, - { - "name": "Has_Ped-PRO-CTCAE_Parent", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "An association to assign a Ped-PRO-CTCAE parent to each concept with the intent of creating a hierarchy that includes only terms in which PRO-CTCAE is the contributing source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "A1", + "name": "Role_Has_Domain", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Domain", + "type": "Display_Name" + }, + { + "name": "Role_Has_Domain", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Domain", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the parent of the branch encompassing a role's domain.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A12", + "name": "Has_Data_Element", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Data Element", + "type": "Display_Name" + }, + { + "name": "Has_Data_Element", + "type": "FULL_SYN" + }, + { + "name": "Has_Data_Element", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association created to relate a data element concept to the codelist term that is used to bundle its subset of valid value concepts.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A13", + "name": "Related_To_Genetic_Biomarker", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Related_To_Genetic_Biomarker", + "type": "FULL_SYN" + }, + { + "name": "Related_To_Genetic_Biomarker", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that indicates that a finding or lab test is related to a gene, possibly through a variant or product.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A14", + "name": "Neoplasm_Has_Special_Category", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Neoplasm_Has_Special_Category", + "type": "FULL_SYN" + }, + { + "name": "Neoplasm_Has_Special_Category", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that indicates that a neoplastic disease can have the characteristics defined by a Neoplasm by Special Category concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A15", + "name": "Has_CTCAE_5_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_CTCAE_5_Parent", + "type": "FULL_SYN" + }, + { + "name": "Has_CTCAE_5_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association created to allow the source CTCAE 5.0 to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which CTCAE is the contributing source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A16", + "name": "Has_INC_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_INC_Parent", + "type": "FULL_SYN" + }, + { + "name": "Has_INC_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association created to allow the source INC to assign a parent to each concept with the intent of creating a hierarchy that includes only terms in which they are the contributing source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A17", + "name": "Has_Pharmaceutical_State_Of_Matter", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_Pharmaceutical_State_Of_Matter", + "type": "FULL_SYN" + }, + { + "name": "State of Matter", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_State_Of_Matter", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the physical conditions describing the molecular form of a product. The target value should belong to the EDQM-HC State of Matter Terminology.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A18", + "name": "Has_Pharmaceutical_Basic_Dose_Form", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Basic Dose Form", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_Basic_Dose_Form", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_Basic_Dose_Form", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the category of the pharmaceutical dose form, used to group together related pharmaceutical dose forms. The target value should belong to the EDQM-HC Basic Dose Form Terminology.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A19", + "name": "Has_Pharmaceutical_Administration_Method", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Administration Method", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_Administration_Method", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_Administration_Method", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the methods by which a pharmaceutical product is intended to be administered to the patient. The target value should belong to the EDQM-HC Administration Method Terminology.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A2", + "name": "Role_Has_Range", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Range", + "type": "Display_Name" + }, + { + "name": "Role_Has_Range", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Range", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the parent of the branch encompassing the role's range.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A20", + "name": "Has_Pharmaceutical_Intended_Site", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_Pharmaceutical_Intended_Site", + "type": "FULL_SYN" + }, + { + "name": "Intended Site", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_Intended_Site", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the general body sites at which a pharmaceutical product is intended to be administered. The target value should belong to the EDQM-HC Intended Site of Administration Terminology.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A21", + "name": "Has_Pharmaceutical_Release_Characteristics", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_Pharmaceutical_Release_Characteristics", + "type": "FULL_SYN" + }, + { + "name": "Release Characteristics", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_Release_Characteristics", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the timing by which an active ingredient is made available in the body after administration of the pharmaceutical product, in comparison with a conventional, direct release of the active ingredient. The target value should belong to the EDQM-HC Release Characteristics Terminology.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A22", + "name": "Has_Pharmaceutical_Transformation", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_Pharmaceutical_Transformation", + "type": "FULL_SYN" + }, + { + "name": "Transformation", + "type": "FULL_SYN" + }, + { + "name": "Has_Pharmaceutical_Transformation", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the procedures that are carried out in order to convert a manufactured item that requires such a procedure into a pharmaceutical product. The target value should belong to the EDQM-HC Transformation Terminology.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A23", + "name": "Has_PCDC_Data_Type", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PCDC_Data_Type", + "type": "FULL_SYN" + }, + { + "name": "Has_PCDC_Data_Type", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies one of three data types for a particular variable, String, Code or Number.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A24", + "name": "Is_PCDC_AML_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is_PCDC_AML_Authorized_Value_For_Variable", + "type": "FULL_SYN" + }, + { + "name": "Is_PCDC_AML_Authorized_Value_For_Variable", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that indicates a PCDC AML concept is an Authorized Value for a PCDC AML Variable concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A25", + "name": "Value_Set_Is_Paired_With", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Value_Set_Is_Paired_With", + "type": "FULL_SYN" + }, + { + "name": "Value_Set_Is_Paired_With", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies the paired 'Test or Parameter Name' codelist that goes with the 'Test or Parameter Code' codelist. This association uni-directionally points from a Test/Parameter Code Codelist to the Test/Parameter Name Codelist.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A26", + "name": "Has_PCDC_AML_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PCDC_AML_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_PCDC_AML_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which PCDC AML Authorized Values are possible for a specific Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A27", + "name": "Has_CTDC_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_CTDC_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_CTDC_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association connecting a CTDC Property concept to its dedicated value concept(s).", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A28", + "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", + "type": "FULL_SYN" + }, + { + "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that indicates a PCDC EWS concept is an Authorized Value for a specific PCDC EWS Variable concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A29", + "name": "Has_PCDC_EWS_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PCDC_EWS_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_PCDC_EWS_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which Authorized Values are possible for a specific PCDC EWS Variable concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A3", + "name": "Role_Has_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Role Has Parent", + "type": "Display_Name" + }, + { + "name": "Role_Has_Parent", + "type": "FULL_SYN" + }, + { + "name": "Role_Has_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that specifies that a role exists as part of a role hierarchy and specifies the role's parent, the role that this role specializes.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A30", + "name": "Has_ICDC_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_ICDC_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_ICDC_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association connecting an ICDC Property concept to its dedicated value concept(s).", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A31", + "name": "Has_GDC_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_GDC_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_GDC_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that connects a concept representing a GDC property to its dedicated value concept(s).", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A32", + "name": "Is_Value_For_GDC_Property", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is_Value_For_GDC_Property", + "type": "FULL_SYN" + }, + { + "name": "Is_Value_For_GDC_Property", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that that connects a concept representing a GDC value to any associated GDC property concept(s).", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A33", + "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", + "type": "FULL_SYN" + }, + { + "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that indicates a concept is a dedicated Authorized Value concept for a specific PCDC GCT Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A34", + "name": "Has_PCDC_GCT_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PCDC_GCT_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_PCDC_GCT_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which Authorized Values are possible for a specific PCDC GCT Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A35", + "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", + "type": "FULL_SYN" + }, + { + "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that indicates a PCDC ALL concept is a Authorized Value for an PCDC ALL Variable concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A36", + "name": "Has_PCDC_ALL_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PCDC_ALL_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_PCDC_ALL_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which PCDC ALL Authorized Values are possible for a specific Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A37", + "name": "Has_SeroNet_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_SeroNet_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_SeroNet_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which Authorized Values are possible for a specific SeroNet Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A38", + "name": "Has_PCDC_OS_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PCDC_OS_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_PCDC_OS_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which Authorized Values are possible for a specific PCDC OS Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A39", + "name": "Has_PCDC_HL_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PCDC_HL_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_PCDC_HL_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which Authorized Values are possible for a specific PCDC HL Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A4", + "name": "Qualifier_Applies_To", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Qualifier Applies To", + "type": "Display_Name" + }, + { + "name": "Qualifier_Applies_To", + "type": "FULL_SYN" + }, + { + "name": "Qualifier_Applies_To", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that indicates the property or association that the qualifier is to be used with.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A40", + "name": "Has_DIPG_DMG_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_DIPG_DMG_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_DIPG_DMG_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which Authorized Values are possible for a specific DIPG/DMG Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A42", + "name": "Has_OORO_PC_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_OORO_PC_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_OORO_PC_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association specifying the Values for a specific OORO Prostate Cancer (PC) Attribute.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A48", + "name": "Has_ACC-AHA_SARS2_Authorized_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_ACC-AHA_SARS2_Authorized_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_ACC-AHA_SARS2_Authorized_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that shows which Authorized Values are possible for a specific ACC/AHA SARS2 Variable.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A49", + "name": "Has_PRO-CTCAE_Attribute", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PRO-CTCAE_Attribute", + "type": "FULL_SYN" + }, + { + "name": "Has_PRO-CTCAE_Attribute", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An indication that a PRO-CTCAE concept is associated with a PRO-CTCAE attribute.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A5", + "name": "Has_Salt_Form", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Salt Form", + "type": "Display_Name" + }, + { + "name": "Has_Salt_Form", + "type": "FULL_SYN" + }, + { + "name": "Has_Salt_Form", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that connects the base form of a drug with its various salt forms.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "USAGE NOTE: A salt form of a drug consists of 2 parts, one acidic and one basic group that are readily disassociated in liquid phase. Salt forms are either salts of strong acids and basic drugs (e.g. Atropine Sulfate, Cetirizine Hydrochloride) or salts of strong bases and acidic drugs (Allopurinol Sodium). This association is usually used in conjunction with Has_Free_Acid_Or_Base_Form." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A50", + "name": "Has_Ped-PRO-CTCAE_Attribute", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_Ped-PRO-CTCAE_Attribute", + "type": "FULL_SYN" + }, + { + "name": "Has_Ped-PRO-CTCAE_Attribute", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An indication that a Ped-PRO-CTCAE concept is associated with a Ped-PRO-CTCAE attribute.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A51", + "name": "Has_PRO-CTCAE_Attribute_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PRO-CTCAE_Attribute_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_PRO-CTCAE_Attribute_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An indication that a PRO-CTCAE attribute is associated with a PRO-CTCAE value.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A52", + "name": "Has_Ped-PRO-CTCAE_Attribute_Value", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_Ped-PRO-CTCAE_Attribute_Value", + "type": "FULL_SYN" + }, + { + "name": "Has_Ped-PRO-CTCAE_Attribute_Value", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An indication that a Ped-PRO-CTCAE attribute is associated with a Ped-PRO-CTCAE value.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A53", + "name": "Has_PRO-CTCAE_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_PRO-CTCAE_Parent", + "type": "FULL_SYN" + }, + { + "name": "Has_PRO-CTCAE_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association to assign a PRO-CTCAE parent to each concept with the intent of creating a hierarchy that includes only terms in which PRO-CTCAE is the contributing source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A54", + "name": "Has_Ped-PRO-CTCAE_Parent", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has_Ped-PRO-CTCAE_Parent", + "type": "FULL_SYN" + }, + { + "name": "Has_Ped-PRO-CTCAE_Parent", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association to assign a Ped-PRO-CTCAE parent to each concept with the intent of creating a hierarchy that includes only terms in which PRO-CTCAE is the contributing source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A6", + "name": "Has_Free_Acid_Or_Base_Form", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Free Acid Or Base Form", + "type": "Display_Name" + }, + { + "name": "Has_Free_Acid_Or_Base_Form", + "type": "FULL_SYN" + }, + { + "name": "Has_Free_Acid_Or_Base_Form", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that connects the salt form of a drug with its free acid or free base.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "The free acid or base is responsible for the drug's therapeutic effect. Hence, the salt form of a drug has the same mechanism of action as the free acid or base form." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A7", + "name": "Has_Target", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Target", + "type": "Display_Name" + }, + { + "name": "Has_Target", + "type": "FULL_SYN" + }, + { + "name": "Has_Target", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that connects a drug or other agent to a clinically intended, molecular-scale target. The target value may be a gene, gene product, anatomic structure, cell, biological process, or other concept, where the effect of the agent on the target is thought to be of therapeutic, diagnostic, or other clinical relevance to a disease process. The effect is most often direct, as defined at a molecular scale, but may also be indirect and/or defined at a larger scale.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A8", + "name": "Concept_In_Subset", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Concept Is In Subset", + "type": "Display_Name" + }, + { + "name": "Concept_In_Subset", + "type": "FULL_SYN" + }, + { + "name": "Concept_In_Subset", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that connects the concept defining a particular terminology subset with concepts that belong to this subset.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "A9", + "name": "Is_Related_To_Endogenous_Product", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Related To Endogenous Product", + "type": "Display_Name" + }, + { + "name": "Is_Related_To_Endogenous_Product", + "type": "FULL_SYN" + }, + { + "name": "Is_Related_To_Endogenous_Product", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "An association that is asserted when there is a relationship or association between the therapeutic moiety and the endogenous gene product.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-associations.txt b/curl-examples/samples/get-associations.txt index b77c7c34..133b1699 100644 --- a/curl-examples/samples/get-associations.txt +++ b/curl-examples/samples/get-associations.txt @@ -1,279 +1,279 @@ -[ - { - "code": "A1", - "name": "Role_Has_Domain", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A12", - "name": "Has_Data_Element", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A13", - "name": "Related_To_Genetic_Biomarker", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A14", - "name": "Neoplasm_Has_Special_Category", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A15", - "name": "Has_CTCAE_5_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A16", - "name": "Has_INC_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A17", - "name": "Has_Pharmaceutical_State_Of_Matter", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A18", - "name": "Has_Pharmaceutical_Basic_Dose_Form", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A19", - "name": "Has_Pharmaceutical_Administration_Method", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A2", - "name": "Role_Has_Range", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A20", - "name": "Has_Pharmaceutical_Intended_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A21", - "name": "Has_Pharmaceutical_Release_Characteristics", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A22", - "name": "Has_Pharmaceutical_Transformation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A23", - "name": "Has_PCDC_Data_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A24", - "name": "Is_PCDC_AML_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A25", - "name": "Value_Set_Is_Paired_With", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A26", - "name": "Has_PCDC_AML_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A27", - "name": "Has_CTDC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A28", - "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A29", - "name": "Has_PCDC_EWS_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A3", - "name": "Role_Has_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A30", - "name": "Has_ICDC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A31", - "name": "Has_GDC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A32", - "name": "Is_Value_For_GDC_Property", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A33", - "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A34", - "name": "Has_PCDC_GCT_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A35", - "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A36", - "name": "Has_PCDC_ALL_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A37", - "name": "Has_SeroNet_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A38", - "name": "Has_PCDC_OS_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A39", - "name": "Has_PCDC_HL_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A4", - "name": "Qualifier_Applies_To", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A40", - "name": "Has_DIPG_DMG_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A5", - "name": "Has_Salt_Form", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A6", - "name": "Has_Free_Acid_Or_Base_Form", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A7", - "name": "Has_Target", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A8", - "name": "Concept_In_Subset", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A9", - "name": "Is_Related_To_Endogenous_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A42", - "name": "Has_OORO_PC_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A48", - "name": "Has_ACC-AHA_SARS2_Authorized_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A49", - "name": "Has_PRO-CTCAE_Attribute", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A50", - "name": "Has_Ped-PRO-CTCAE_Attribute", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A51", - "name": "Has_PRO-CTCAE_Attribute_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A52", - "name": "Has_Ped-PRO-CTCAE_Attribute_Value", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A53", - "name": "Has_PRO-CTCAE_Parent", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "A54", - "name": "Has_Ped-PRO-CTCAE_Parent", - "terminology": "ncit", - "version": "25.02d" - } -] - +[ + { + "code": "A1", + "name": "Role_Has_Domain", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A12", + "name": "Has_Data_Element", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A13", + "name": "Related_To_Genetic_Biomarker", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A14", + "name": "Neoplasm_Has_Special_Category", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A15", + "name": "Has_CTCAE_5_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A16", + "name": "Has_INC_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A17", + "name": "Has_Pharmaceutical_State_Of_Matter", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A18", + "name": "Has_Pharmaceutical_Basic_Dose_Form", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A19", + "name": "Has_Pharmaceutical_Administration_Method", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A2", + "name": "Role_Has_Range", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A20", + "name": "Has_Pharmaceutical_Intended_Site", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A21", + "name": "Has_Pharmaceutical_Release_Characteristics", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A22", + "name": "Has_Pharmaceutical_Transformation", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A23", + "name": "Has_PCDC_Data_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A24", + "name": "Is_PCDC_AML_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A25", + "name": "Value_Set_Is_Paired_With", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A26", + "name": "Has_PCDC_AML_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A27", + "name": "Has_CTDC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A28", + "name": "Is_PCDC_EWS_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A29", + "name": "Has_PCDC_EWS_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A3", + "name": "Role_Has_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A30", + "name": "Has_ICDC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A31", + "name": "Has_GDC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A32", + "name": "Is_Value_For_GDC_Property", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A33", + "name": "Is_PCDC_GCT_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A34", + "name": "Has_PCDC_GCT_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A35", + "name": "Is_PCDC_ALL_Authorized_Value_For_Variable", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A36", + "name": "Has_PCDC_ALL_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A37", + "name": "Has_SeroNet_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A38", + "name": "Has_PCDC_OS_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A39", + "name": "Has_PCDC_HL_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A4", + "name": "Qualifier_Applies_To", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A40", + "name": "Has_DIPG_DMG_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A42", + "name": "Has_OORO_PC_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A48", + "name": "Has_ACC-AHA_SARS2_Authorized_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A49", + "name": "Has_PRO-CTCAE_Attribute", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A5", + "name": "Has_Salt_Form", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A50", + "name": "Has_Ped-PRO-CTCAE_Attribute", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A51", + "name": "Has_PRO-CTCAE_Attribute_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A52", + "name": "Has_Ped-PRO-CTCAE_Attribute_Value", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A53", + "name": "Has_PRO-CTCAE_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A54", + "name": "Has_Ped-PRO-CTCAE_Parent", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A6", + "name": "Has_Free_Acid_Or_Base_Form", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A7", + "name": "Has_Target", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A8", + "name": "Concept_In_Subset", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "A9", + "name": "Is_Related_To_Endogenous_Product", + "terminology": "ncit", + "version": "25.07d" + } +] + diff --git a/curl-examples/samples/get-concept-by-code-associations.txt b/curl-examples/samples/get-concept-by-code-associations.txt index e84b2271..71515a35 100644 --- a/curl-examples/samples/get-concept-by-code-associations.txt +++ b/curl-examples/samples/get-concept-by-code-associations.txt @@ -1,168 +1,163 @@ -[ - { - "type": "Concept_In_Subset", - "relatedCode": "C77526", - "relatedName": "CDISC SEND Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C88025", - "relatedName": "CDISC SEND Tumor Findings Results Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C165258", - "relatedName": "Cellosaurus Disease Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C192842", - "relatedName": "Cellosaurus Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C61410", - "relatedName": "Clinical Data Interchange Standards Consortium Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C138188", - "relatedName": "Clinical Trials Search-Application Programming Interface Disease Category Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C156953", - "relatedName": "CPTAC Baseline Medical Forms Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C158520", - "relatedName": "CPTAC Codelists Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C159415", - "relatedName": "CPTAC Melanoma Baseline Form" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C156966", - "relatedName": "CPTAC Neoplasms Codelist" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C156952", - "relatedName": "CPTAC Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C157534", - "relatedName": "CPTAC Uveal Melanoma Baseline Form" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C118168", - "relatedName": "CTRP Disease Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C116977", - "relatedName": "CTRP Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C138190", - "relatedName": "CTS-API Disease Main Type Terminology" - }, - { - "type": "Is_Value_For_GDC_Property", - "relatedCode": "C178243", - "relatedName": "Family Cancer History Relative Primary Diagnosis Question" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C157711", - "relatedName": "GDC Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C177537", - "relatedName": "GDC Value Terminology" - }, - { - "type": "Is_Value_For_GDC_Property", - "relatedCode": "C176985", - "relatedName": "Histology ICD-O Morphology Code" - }, - { - "type": "Is_Value_For_GDC_Property", - "relatedCode": "C177621", - "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168658", - "relatedName": "Mapped ICDO3.1 Morphology PT Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168657", - "relatedName": "Mapped ICDO3.1 Morphology Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168655", - "relatedName": "Mapped ICDO3.1 Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168662", - "relatedName": "Mapped ICDO3.2 Morphology PT Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168661", - "relatedName": "Mapped ICDO3.2 Morphology Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168656", - "relatedName": "Mapped ICDO3.2 Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C103113", - "relatedName": "NCI CTEP SDC Melanoma Sub-Category Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C102905", - "relatedName": "NCI CTEP Simplified Disease Classification Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C126659", - "relatedName": "NCIt Neoplasm Core Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C90259", - "relatedName": "NICHD Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C189762", - "relatedName": "Pediatric Adverse Events Terminology Mapped to MedDRA" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C118464", - "relatedName": "Pediatric Adverse Events Terminology" - }, - { - "type": "Neoplasm_Has_Special_Category", - "relatedCode": "C9292", - "relatedName": "Solid Neoplasm" - } -] - +[ + { + "type": "Concept_In_Subset", + "relatedCode": "C77526", + "relatedName": "CDISC SEND Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C88025", + "relatedName": "CDISC SEND Tumor Findings Results Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C165258", + "relatedName": "Cellosaurus Disease Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C61410", + "relatedName": "Clinical Data Interchange Standards Consortium Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C138188", + "relatedName": "Clinical Trials Search-Application Programming Interface Disease Category Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C156953", + "relatedName": "CPTAC Baseline Medical Forms Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C158520", + "relatedName": "CPTAC Codelists Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C159415", + "relatedName": "CPTAC Melanoma Baseline Form" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C156966", + "relatedName": "CPTAC Neoplasms Codelist" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C156952", + "relatedName": "CPTAC Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C157534", + "relatedName": "CPTAC Uveal Melanoma Baseline Form" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C118168", + "relatedName": "CTRP Disease Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C116977", + "relatedName": "CTRP Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C138190", + "relatedName": "CTS-API Disease Main Type Terminology" + }, + { + "type": "Is_Value_For_GDC_Property", + "relatedCode": "C178243", + "relatedName": "Family Cancer History Relative Primary Diagnosis Question" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C157711", + "relatedName": "GDC Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C177537", + "relatedName": "GDC Value Terminology" + }, + { + "type": "Is_Value_For_GDC_Property", + "relatedCode": "C176985", + "relatedName": "Histology ICD-O Morphology Code" + }, + { + "type": "Is_Value_For_GDC_Property", + "relatedCode": "C177621", + "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168658", + "relatedName": "Mapped ICDO3.1 Morphology PT Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168657", + "relatedName": "Mapped ICDO3.1 Morphology Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168655", + "relatedName": "Mapped ICDO3.1 Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168662", + "relatedName": "Mapped ICDO3.2 Morphology PT Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168661", + "relatedName": "Mapped ICDO3.2 Morphology Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168656", + "relatedName": "Mapped ICDO3.2 Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C103113", + "relatedName": "NCI CTEP SDC Melanoma Sub-Category Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C102905", + "relatedName": "NCI CTEP Simplified Disease Classification Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C126659", + "relatedName": "NCIt Neoplasm Core Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C90259", + "relatedName": "NICHD Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C189762", + "relatedName": "Pediatric Adverse Events Terminology Mapped to MedDRA" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C118464", + "relatedName": "Pediatric Adverse Events Terminology" + }, + { + "type": "Neoplasm_Has_Special_Category", + "relatedCode": "C9292", + "relatedName": "Solid Neoplasm" + } +] + diff --git a/curl-examples/samples/get-concept-by-code-children.txt b/curl-examples/samples/get-concept-by-code-children.txt index e506437d..0c5ad7a3 100644 --- a/curl-examples/samples/get-concept-by-code-children.txt +++ b/curl-examples/samples/get-concept-by-code-children.txt @@ -1,93 +1,98 @@ -[ - { - "code": "C3802", - "name": "Amelanotic Melanoma", - "leaf": false - }, - { - "code": "C8410", - "name": "Breast Melanoma", - "leaf": true - }, - { - "code": "C131506", - "name": "Childhood Melanoma", - "leaf": false - }, - { - "code": "C3510", - "name": "Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C4236", - "name": "Epithelioid Cell Melanoma", - "leaf": false - }, - { - "code": "C8925", - "name": "Metastatic Melanoma", - "leaf": false - }, - { - "code": "C66756", - "name": "Mixed Epithelioid and Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C205125", - "name": "Nodular Melanoma", - "leaf": false - }, - { - "code": "C8711", - "name": "Non-Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C8562", - "name": "Ocular Melanoma", - "leaf": false - }, - { - "code": "C118828", - "name": "Orbital Melanoma", - "leaf": true - }, - { - "code": "C162547", - "name": "Penile Melanoma", - "leaf": false - }, - { - "code": "C7087", - "name": "Recurrent Melanoma", - "leaf": false - }, - { - "code": "C147983", - "name": "Refractory Melanoma", - "leaf": false - }, - { - "code": "C4228", - "name": "Regressing Melanoma", - "leaf": false - }, - { - "code": "C190239", - "name": "Resectable Melanoma", - "leaf": false - }, - { - "code": "C4237", - "name": "Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C148517", - "name": "Unresectable Melanoma", - "leaf": false - } -] - +[ + { + "code": "C3802", + "name": "Amelanotic Melanoma", + "leaf": false + }, + { + "code": "C8410", + "name": "Breast Melanoma", + "leaf": true + }, + { + "code": "C131506", + "name": "Childhood Melanoma", + "leaf": false + }, + { + "code": "C3510", + "name": "Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C4236", + "name": "Epithelioid Cell Melanoma", + "leaf": false + }, + { + "code": "C217198", + "name": "Localized Melanoma", + "leaf": false + }, + { + "code": "C215044", + "name": "Melanoma In Situ", + "leaf": false + }, + { + "code": "C8925", + "name": "Metastatic Melanoma", + "leaf": false + }, + { + "code": "C66756", + "name": "Mixed Epithelioid and Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C205125", + "name": "Nodular Melanoma", + "leaf": false + }, + { + "code": "C8711", + "name": "Non-Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C118828", + "name": "Orbital Melanoma", + "leaf": true + }, + { + "code": "C162547", + "name": "Penile Melanoma", + "leaf": false + }, + { + "code": "C7087", + "name": "Recurrent Melanoma", + "leaf": false + }, + { + "code": "C147983", + "name": "Refractory Melanoma", + "leaf": false + }, + { + "code": "C4228", + "name": "Regressing Melanoma", + "leaf": false + }, + { + "code": "C190239", + "name": "Resectable Melanoma", + "leaf": false + }, + { + "code": "C4237", + "name": "Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C148517", + "name": "Unresectable Melanoma", + "leaf": false + } +] + diff --git a/curl-examples/samples/get-concept-by-code-custom.txt b/curl-examples/samples/get-concept-by-code-custom.txt index 5f00fc98..8c81b66c 100644 --- a/curl-examples/samples/get-concept-by-code-custom.txt +++ b/curl-examples/samples/get-concept-by-code-custom.txt @@ -1,270 +1,275 @@ -{ - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "synonyms": [ - { - "name": "Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "caDSR" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "MELANOMA, MALIGNANT", - "termType": "PT", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "Cellosaurus" - }, - { - "name": "Malignant Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CPTAC" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTEP", - "code": "10053571", - "subSource": "SDC" - }, - { - "name": "Melanoma", - "termType": "DN", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "Melanoma, NOS", - "termType": "SY", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI-GLOSS", - "code": "CDR0000045135" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NICHD" - }, - { - "name": "Melanoma", - "type": "Display_Name" - }, - { - "name": "Melanoma", - "type": "Preferred_Name" - } - ], - "children": [ - { - "code": "C3802", - "name": "Amelanotic Melanoma", - "leaf": false - }, - { - "code": "C8410", - "name": "Breast Melanoma", - "leaf": true - }, - { - "code": "C131506", - "name": "Childhood Melanoma", - "leaf": false - }, - { - "code": "C3510", - "name": "Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C4236", - "name": "Epithelioid Cell Melanoma", - "leaf": false - }, - { - "code": "C8925", - "name": "Metastatic Melanoma", - "leaf": false - }, - { - "code": "C66756", - "name": "Mixed Epithelioid and Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C205125", - "name": "Nodular Melanoma", - "leaf": false - }, - { - "code": "C8711", - "name": "Non-Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C8562", - "name": "Ocular Melanoma", - "leaf": false - }, - { - "code": "C118828", - "name": "Orbital Melanoma", - "leaf": true - }, - { - "code": "C162547", - "name": "Penile Melanoma", - "leaf": false - }, - { - "code": "C7087", - "name": "Recurrent Melanoma", - "leaf": false - }, - { - "code": "C147983", - "name": "Refractory Melanoma", - "leaf": false - }, - { - "code": "C4228", - "name": "Regressing Melanoma", - "leaf": false - }, - { - "code": "C190239", - "name": "Resectable Melanoma", - "leaf": false - }, - { - "code": "C4237", - "name": "Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C148517", - "name": "Unresectable Melanoma", - "leaf": false - } - ], - "inverseAssociations": [ - { - "type": "Has_GDC_Value", - "relatedCode": "C178243", - "relatedName": "Family Cancer History Relative Primary Diagnosis Question" - }, - { - "type": "Has_GDC_Value", - "relatedCode": "C176985", - "relatedName": "Histology ICD-O Morphology Code" - }, - { - "type": "Has_GDC_Value", - "relatedCode": "C177621", - "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" - } - ], - "maps": [ - { - "type": "Related To", - "targetName": "8720/3", - "targetTermType": "PT", - "targetCode": "morphology", - "targetTerminology": "GDC" - }, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "8720/3", - "targetTerminology": "ICDO3", - "targetTerminologyVersion": "3.2" - }, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "8720/3", - "targetTerminology": "ICDO3", - "targetTerminologyVersion": "3.1" - }, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "primary_diagnosis", - "targetTerminology": "GDC" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma, NOS", - "targetTermType": "PT", - "targetCode": "primary_diagnosis", - "targetTerminology": "GDC" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma", - "targetTermType": "LLT", - "targetCode": "10053571", - "targetTerminology": "MedDRA", - "targetTerminologyVersion": "18.1" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma", - "targetTermType": "PT", - "targetCode": "relationship_primary_diagnosis", - "targetTerminology": "GDC" - } - ] -} - +{ + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "synonyms": [ + { + "name": "Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "caDSR" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "MELANOMA, MALIGNANT", + "termType": "PT", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "Cellosaurus" + }, + { + "name": "Malignant Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CPTAC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTEP", + "code": "10053571", + "subSource": "SDC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "termType": "DN", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "Melanoma, NOS", + "termType": "SY", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI-GLOSS", + "code": "CDR0000045135" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NICHD" + }, + { + "name": "Melanoma", + "type": "Display_Name" + }, + { + "name": "Melanoma", + "type": "Preferred_Name" + } + ], + "children": [ + { + "code": "C3802", + "name": "Amelanotic Melanoma", + "leaf": false + }, + { + "code": "C8410", + "name": "Breast Melanoma", + "leaf": true + }, + { + "code": "C131506", + "name": "Childhood Melanoma", + "leaf": false + }, + { + "code": "C3510", + "name": "Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C4236", + "name": "Epithelioid Cell Melanoma", + "leaf": false + }, + { + "code": "C217198", + "name": "Localized Melanoma", + "leaf": false + }, + { + "code": "C215044", + "name": "Melanoma In Situ", + "leaf": false + }, + { + "code": "C8925", + "name": "Metastatic Melanoma", + "leaf": false + }, + { + "code": "C66756", + "name": "Mixed Epithelioid and Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C205125", + "name": "Nodular Melanoma", + "leaf": false + }, + { + "code": "C8711", + "name": "Non-Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C118828", + "name": "Orbital Melanoma", + "leaf": true + }, + { + "code": "C162547", + "name": "Penile Melanoma", + "leaf": false + }, + { + "code": "C7087", + "name": "Recurrent Melanoma", + "leaf": false + }, + { + "code": "C147983", + "name": "Refractory Melanoma", + "leaf": false + }, + { + "code": "C4228", + "name": "Regressing Melanoma", + "leaf": false + }, + { + "code": "C190239", + "name": "Resectable Melanoma", + "leaf": false + }, + { + "code": "C4237", + "name": "Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C148517", + "name": "Unresectable Melanoma", + "leaf": false + } + ], + "inverseAssociations": [ + { + "type": "Has_GDC_Value", + "relatedCode": "C178243", + "relatedName": "Family Cancer History Relative Primary Diagnosis Question" + }, + { + "type": "Has_GDC_Value", + "relatedCode": "C176985", + "relatedName": "Histology ICD-O Morphology Code" + }, + { + "type": "Has_GDC_Value", + "relatedCode": "C177621", + "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" + } + ], + "maps": [ + { + "type": "Related To", + "targetName": "8720/3", + "targetTermType": "PT", + "targetCode": "morphology", + "targetTerminology": "GDC" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "8720/3", + "targetTerminology": "ICDO3", + "targetTerminologyVersion": "3.2" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "8720/3", + "targetTerminology": "ICDO3", + "targetTerminologyVersion": "3.1" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "primary_diagnosis", + "targetTerminology": "GDC" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma, NOS", + "targetTermType": "PT", + "targetCode": "primary_diagnosis", + "targetTerminology": "GDC" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma", + "targetTermType": "LLT", + "targetCode": "10053571", + "targetTerminology": "MedDRA", + "targetTerminologyVersion": "18.1" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma", + "targetTermType": "PT", + "targetCode": "relationship_primary_diagnosis", + "targetTerminology": "GDC" + } + ] +} + diff --git a/curl-examples/samples/get-concept-by-code-disjointWith.txt b/curl-examples/samples/get-concept-by-code-disjointWith.txt index df58628c..dbb9ebbb 100644 --- a/curl-examples/samples/get-concept-by-code-disjointWith.txt +++ b/curl-examples/samples/get-concept-by-code-disjointWith.txt @@ -1,23 +1,23 @@ -[ - { - "code": "C2950", - "name": "Cytogenetic Abnormality", - "leaf": false - }, - { - "code": "C36340", - "name": "Molecular Pathway Deregulation", - "leaf": false - }, - { - "code": "C97926", - "name": "Molecular Sequence Variation", - "leaf": false - }, - { - "code": "C45594", - "name": "Protein Sequence Abnormality", - "leaf": false - } -] - +[ + { + "code": "C2950", + "name": "Cytogenetic Abnormality", + "leaf": false + }, + { + "code": "C36340", + "name": "Molecular Pathway Deregulation", + "leaf": false + }, + { + "code": "C97926", + "name": "Molecular Sequence Variation", + "leaf": false + }, + { + "code": "C45594", + "name": "Protein Sequence Abnormality", + "leaf": false + } +] + diff --git a/curl-examples/samples/get-concept-by-code-full.txt b/curl-examples/samples/get-concept-by-code-full.txt index d7a346b3..3daffc28 100644 --- a/curl-examples/samples/get-concept-by-code-full.txt +++ b/curl-examples/samples/get-concept-by-code-full.txt @@ -1,2035 +1,870 @@ -{ - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "synonyms": [ - { - "name": "Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "caDSR" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "MELANOMA, MALIGNANT", - "termType": "PT", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "Cellosaurus" - }, - { - "name": "Malignant Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CPTAC" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTEP", - "code": "10053571", - "subSource": "SDC" - }, - { - "name": "Melanoma", - "termType": "DN", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "Melanoma, NOS", - "termType": "SY", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI-GLOSS", - "code": "CDR0000045135" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NICHD" - }, - { - "name": "Melanoma", - "type": "Display_Name" - }, - { - "name": "Melanoma", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A form of cancer that begins in melanocytes (cells that make the pigment melanin). It may begin in a mole (skin melanoma), but can also begin in other pigmented tissues, such as in the eye or in the intestines.", - "type": "ALT_DEFINITION", - "source": "NCI-GLOSS" - }, - { - "definition": "A malignant neoplasm composed of melanocytes.", - "type": "ALT_DEFINITION", - "source": "CDISC" - }, - { - "definition": "A malignant neoplasm comprised of melanocytes typically arising in the skin.", - "type": "ALT_DEFINITION", - "source": "NICHD" - }, - { - "definition": "A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.", - "type": "DEFINITION", - "source": "NCI" - } - ], - "properties": [ - { - "type": "Contributing_Source", - "value": "CDISC" - }, - { - "type": "Contributing_Source", - "value": "Cellosaurus" - }, - { - "type": "Contributing_Source", - "value": "CPTAC" - }, - { - "type": "Contributing_Source", - "value": "CTEP" - }, - { - "type": "Contributing_Source", - "value": "CTRP" - }, - { - "type": "Contributing_Source", - "value": "GDC" - }, - { - "type": "Contributing_Source", - "value": "MedDRA" - }, - { - "type": "Contributing_Source", - "value": "NICHD" - }, - { - "type": "ICD-O-3_Code", - "value": "8720/3" - }, - { - "type": "Legacy Concept Name", - "value": "Melanoma" - }, - { - "type": "Maps_To", - "value": "8720/3" - }, - { - "type": "Maps_To", - "value": "Malignant melanoma, NOS" - }, - { - "type": "Maps_To", - "value": "Melanoma" - }, - { - "type": "Maps_To", - "value": "Melanoma, NOS" - }, - { - "type": "Neoplastic_Status", - "value": "Malignant" - }, - { - "type": "Semantic_Type", - "value": "Neoplastic Process" - }, - { - "type": "UMLS_CUI", - "value": "C0025202" - } - ], - "children": [ - { - "code": "C3802", - "name": "Amelanotic Melanoma", - "leaf": false - }, - { - "code": "C8410", - "name": "Breast Melanoma", - "leaf": true - }, - { - "code": "C131506", - "name": "Childhood Melanoma", - "leaf": false - }, - { - "code": "C3510", - "name": "Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C4236", - "name": "Epithelioid Cell Melanoma", - "leaf": false - }, - { - "code": "C8925", - "name": "Metastatic Melanoma", - "leaf": false - }, - { - "code": "C66756", - "name": "Mixed Epithelioid and Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C205125", - "name": "Nodular Melanoma", - "leaf": false - }, - { - "code": "C8711", - "name": "Non-Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C8562", - "name": "Ocular Melanoma", - "leaf": false - }, - { - "code": "C118828", - "name": "Orbital Melanoma", - "leaf": true - }, - { - "code": "C162547", - "name": "Penile Melanoma", - "leaf": false - }, - { - "code": "C7087", - "name": "Recurrent Melanoma", - "leaf": false - }, - { - "code": "C147983", - "name": "Refractory Melanoma", - "leaf": false - }, - { - "code": "C4228", - "name": "Regressing Melanoma", - "leaf": false - }, - { - "code": "C190239", - "name": "Resectable Melanoma", - "leaf": false - }, - { - "code": "C4237", - "name": "Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C148517", - "name": "Unresectable Melanoma", - "leaf": false - } - ], - "parents": [ - { - "code": "C9305", - "name": "Malignant Neoplasm" - }, - { - "code": "C7058", - "name": "Melanocytic Neoplasm" - } - ], - "associations": [ - { - "type": "Concept_In_Subset", - "relatedCode": "C77526", - "relatedName": "CDISC SEND Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C88025", - "relatedName": "CDISC SEND Tumor Findings Results Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C165258", - "relatedName": "Cellosaurus Disease Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C192842", - "relatedName": "Cellosaurus Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C61410", - "relatedName": "Clinical Data Interchange Standards Consortium Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C138188", - "relatedName": "Clinical Trials Search-Application Programming Interface Disease Category Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C156953", - "relatedName": "CPTAC Baseline Medical Forms Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C158520", - "relatedName": "CPTAC Codelists Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C159415", - "relatedName": "CPTAC Melanoma Baseline Form" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C156966", - "relatedName": "CPTAC Neoplasms Codelist" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C156952", - "relatedName": "CPTAC Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C157534", - "relatedName": "CPTAC Uveal Melanoma Baseline Form" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C118168", - "relatedName": "CTRP Disease Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C116977", - "relatedName": "CTRP Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C138190", - "relatedName": "CTS-API Disease Main Type Terminology" - }, - { - "type": "Is_Value_For_GDC_Property", - "relatedCode": "C178243", - "relatedName": "Family Cancer History Relative Primary Diagnosis Question" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C157711", - "relatedName": "GDC Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C177537", - "relatedName": "GDC Value Terminology" - }, - { - "type": "Is_Value_For_GDC_Property", - "relatedCode": "C176985", - "relatedName": "Histology ICD-O Morphology Code" - }, - { - "type": "Is_Value_For_GDC_Property", - "relatedCode": "C177621", - "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168658", - "relatedName": "Mapped ICDO3.1 Morphology PT Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168657", - "relatedName": "Mapped ICDO3.1 Morphology Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168655", - "relatedName": "Mapped ICDO3.1 Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168662", - "relatedName": "Mapped ICDO3.2 Morphology PT Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168661", - "relatedName": "Mapped ICDO3.2 Morphology Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C168656", - "relatedName": "Mapped ICDO3.2 Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C103113", - "relatedName": "NCI CTEP SDC Melanoma Sub-Category Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C102905", - "relatedName": "NCI CTEP Simplified Disease Classification Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C126659", - "relatedName": "NCIt Neoplasm Core Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C90259", - "relatedName": "NICHD Terminology" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C189762", - "relatedName": "Pediatric Adverse Events Terminology Mapped to MedDRA" - }, - { - "type": "Concept_In_Subset", - "relatedCode": "C118464", - "relatedName": "Pediatric Adverse Events Terminology" - }, - { - "type": "Neoplasm_Has_Special_Category", - "relatedCode": "C9292", - "relatedName": "Solid Neoplasm" - } - ], - "inverseAssociations": [ - { - "type": "Has_GDC_Value", - "relatedCode": "C178243", - "relatedName": "Family Cancer History Relative Primary Diagnosis Question" - }, - { - "type": "Has_GDC_Value", - "relatedCode": "C176985", - "relatedName": "Histology ICD-O Morphology Code" - 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}, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "8720/3", - "targetTerminology": "ICDO3", - "targetTerminologyVersion": "3.1" - }, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "primary_diagnosis", - "targetTerminology": "GDC" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma, NOS", - "targetTermType": "PT", - "targetCode": "primary_diagnosis", - "targetTerminology": "GDC" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma", - "targetTermType": "LLT", - "targetCode": "10053571", - "targetTerminology": "MedDRA", - "targetTerminologyVersion": "18.1" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma", - "targetTermType": "PT", - "targetCode": "relationship_primary_diagnosis", - "targetTerminology": "GDC" - } - ] -} - +{ + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "synonyms": [ + { + "name": "Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "caDSR" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "MELANOMA, MALIGNANT", + "termType": "PT", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "Cellosaurus" + }, + { + "name": "Malignant Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CPTAC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTEP", + "code": "10053571", + "subSource": "SDC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "termType": "DN", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "Melanoma, NOS", + "termType": "SY", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI-GLOSS", + "code": "CDR0000045135" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NICHD" + }, + { + "name": "Melanoma", + "type": "Display_Name" + }, + { + "name": "Melanoma", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A form of cancer that begins in melanocytes (cells that make the pigment melanin). It may begin in a mole (skin melanoma), but can also begin in other pigmented tissues, such as in the eye or in the intestines.", + "type": "ALT_DEFINITION", + "source": "NCI-GLOSS" + }, + { + "definition": "A malignant neoplasm composed of melanocytes.", + "type": "ALT_DEFINITION", + "source": "CDISC" + }, + { + "definition": "A malignant neoplasm comprised of melanocytes typically arising in the skin.", + "type": "ALT_DEFINITION", + "source": "NICHD" + }, + { + "definition": "A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.", + "type": "DEFINITION", + "source": "NCI" + } + ], + "properties": [ + { + "code": "P322", + "type": "Contributing_Source", + "value": "CDISC" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "Cellosaurus" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "CPTAC" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "CTEP" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "CTRP" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "GDC" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "MedDRA" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "NICHD" + }, + { + "code": "P334", + "type": "ICD-O-3_Code", + "value": "8720/3" + }, + { + "code": "P366", + "type": "Legacy Concept Name", + "value": "Melanoma" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "8720/3" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Malignant melanoma, NOS" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Melanoma" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Melanoma, NOS" + }, + { + "code": "P363", + "type": "Neoplastic_Status", + "value": "Malignant" + }, + { + "code": "P106", + "type": "Semantic_Type", + "value": "Neoplastic Process" + }, + { + "code": "P207", + "type": "UMLS_CUI", + "value": "C0025202" + } + ], + "children": [ + { + "code": "C3802", + "name": "Amelanotic Melanoma", + "leaf": false + }, + { + "code": "C8410", + "name": "Breast Melanoma", + "leaf": true + }, + { + "code": "C131506", + "name": "Childhood Melanoma", + "leaf": false + }, + { + "code": "C3510", + "name": "Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C4236", + "name": "Epithelioid Cell Melanoma", + "leaf": false + }, + { + "code": "C217198", + "name": "Localized Melanoma", + "leaf": false + }, + { + "code": "C215044", + "name": "Melanoma In Situ", + "leaf": false + }, + { + "code": "C8925", + "name": "Metastatic Melanoma", + "leaf": false + }, + { + "code": "C66756", + "name": "Mixed Epithelioid and Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C205125", + "name": "Nodular Melanoma", + "leaf": false + }, + { + "code": "C8711", + "name": "Non-Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C118828", + "name": "Orbital Melanoma", + "leaf": true + }, + { + "code": "C162547", + "name": "Penile Melanoma", + "leaf": false + }, + { + "code": "C7087", + "name": "Recurrent Melanoma", + "leaf": false + }, + { + "code": "C147983", + "name": "Refractory Melanoma", + "leaf": false + }, + { + "code": "C4228", + "name": "Regressing Melanoma", + "leaf": false + }, + { + "code": "C190239", + "name": "Resectable Melanoma", + "leaf": false + }, + { + "code": "C4237", + "name": "Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C148517", + "name": "Unresectable Melanoma", + "leaf": false + } + ], + "parents": [ + { + "code": "C9305", + "name": "Malignant Neoplasm" + }, + { + "code": "C7058", + "name": "Melanocytic Neoplasm" + } + ], + "associations": [ + { + "type": "Concept_In_Subset", + "relatedCode": "C77526", + "relatedName": "CDISC SEND Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C88025", + "relatedName": "CDISC SEND Tumor Findings Results Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C165258", + "relatedName": "Cellosaurus Disease Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C61410", + "relatedName": "Clinical Data Interchange Standards Consortium Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C138188", + "relatedName": "Clinical Trials Search-Application Programming Interface Disease Category Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C156953", + "relatedName": "CPTAC Baseline Medical Forms Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C158520", + "relatedName": "CPTAC Codelists Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C159415", + "relatedName": "CPTAC Melanoma Baseline Form" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C156966", + "relatedName": "CPTAC Neoplasms Codelist" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C156952", + "relatedName": "CPTAC Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C157534", + "relatedName": "CPTAC Uveal Melanoma Baseline Form" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C118168", + "relatedName": "CTRP Disease Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C116977", + "relatedName": "CTRP Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C138190", + "relatedName": "CTS-API Disease Main Type Terminology" + }, + { + "type": "Is_Value_For_GDC_Property", + "relatedCode": "C178243", + "relatedName": "Family Cancer History Relative Primary Diagnosis Question" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C157711", + "relatedName": "GDC Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C177537", + "relatedName": "GDC Value Terminology" + }, + { + "type": "Is_Value_For_GDC_Property", + "relatedCode": "C176985", + "relatedName": "Histology ICD-O Morphology Code" + }, + { + "type": "Is_Value_For_GDC_Property", + "relatedCode": "C177621", + "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168658", + "relatedName": "Mapped ICDO3.1 Morphology PT Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168657", + "relatedName": "Mapped ICDO3.1 Morphology Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168655", + "relatedName": "Mapped ICDO3.1 Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168662", + "relatedName": "Mapped ICDO3.2 Morphology PT Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168661", + "relatedName": "Mapped ICDO3.2 Morphology Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C168656", + "relatedName": "Mapped ICDO3.2 Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C103113", + "relatedName": "NCI CTEP SDC Melanoma Sub-Category Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C102905", + "relatedName": "NCI CTEP Simplified Disease Classification Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C126659", + "relatedName": "NCIt Neoplasm Core Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C90259", + "relatedName": "NICHD Terminology" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C189762", + "relatedName": "Pediatric Adverse Events Terminology Mapped to MedDRA" + }, + { + "type": "Concept_In_Subset", + "relatedCode": "C118464", + "relatedName": "Pediatric Adverse Events Terminology" + }, + { + "type": "Neoplasm_Has_Special_Category", + "relatedCode": "C9292", + "relatedName": "Solid Neoplasm" + } + ], + "inverseAssociations": [ + { + "type": "Has_GDC_Value", + "relatedCode": "C178243", + "relatedName": "Family Cancer History Relative Primary Diagnosis Question" + }, + { + "type": "Has_GDC_Value", + "relatedCode": "C176985", + "relatedName": "Histology ICD-O Morphology Code" + }, + { + "type": "Has_GDC_Value", + "relatedCode": "C177621", + "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" + } + ], + "roles": [ + { + "type": "Disease_Excludes_Finding", + "relatedCode": "C36122", + "relatedName": "Benign Cellular Infiltrate" + }, + { + "type": "Disease_May_Have_Finding", + "relatedCode": "C43268", + "relatedName": "HMB-45-Positive Neoplastic Cells Present" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C12917", + "relatedName": "Malignant Cell" + }, + { + "type": "Disease_Has_Finding", + "relatedCode": "C36115", + "relatedName": "Malignant Cellular Infiltrate" + }, + { + "type": "Disease_Has_Normal_Cell_Origin", + "relatedCode": "C12591", + "relatedName": "Melanocyte" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C36873", + "relatedName": "Melanoma Cell" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C12922", + "relatedName": "Neoplastic Cell" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C36862", + "relatedName": "Neoplastic Melanocyte" + }, + { + "type": "Disease_May_Have_Finding", + "relatedCode": "C40993", + "relatedName": "S-100-Positive Neoplastic Cells Present" + } + ], + "inverseRoles": [ + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C21390", + "relatedName": "Beta/Gamma Crystallin Domain-Containing Protein 1" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C36101", + "relatedName": "BRCA2-Associated Hereditary Breast and Ovarian Cancer Syndrome" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C10303", + "relatedName": "CDB Regimen" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C26083", + "relatedName": "Chondroitin Sulfate Proteoglycan 4" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C21389", + "relatedName": "CRYBG1 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54321", + "relatedName": "CRYBG1 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C21470", + "relatedName": "CSAG2 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54542", + "relatedName": "CSAG2 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81903", + "relatedName": "CSAG3 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81904", + "relatedName": "CSAG3 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C24316", + "relatedName": "CSPG4 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C52436", + "relatedName": "CSPG4 wt Allele" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63525", + "relatedName": "CVD Regimen" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63785", + "relatedName": "CVD-Aldesleukin-Interferon Alfa-2b Regimen" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C17680", + "relatedName": "Cyclin-Dependent Kinase 4" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C17786", + "relatedName": "Cyclin-Dependent Kinase Inhibitor 2A" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63782", + "relatedName": "Dacarbazine/Interferon Alfa Regimen" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63781", + "relatedName": "Dartmouth Regimen" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C82885", + "relatedName": "DCT Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C82886", + "relatedName": "DCT wt Allele" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C21569", + "relatedName": "DNA Repair Protein XRCC3" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C27264", + "relatedName": "Hereditary Atypical Mole Melanoma Syndrome" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C8495", + "relatedName": "Hereditary Retinoblastoma" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C192671", + "relatedName": "Hereditary Tumor Syndrome Associated with Homologous Recombination Pathway Mutations" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C20765", + "relatedName": "KISS1 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54288", + "relatedName": "KISS1 wt Allele" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C2646", + "relatedName": "L-Dopachrome Tautomerase" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C26331", + "relatedName": "Latent-Transforming Growth Factor Beta-Binding Protein 2" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C24561", + "relatedName": "LTBP2 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C51270", + "relatedName": "LTBP2 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C21261", + "relatedName": "MCAM Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54308", + "relatedName": "MCAM wt Allele" + }, + { + "type": "Gene_Product_Is_Biomarker_Of", + "relatedCode": "C17513", + "relatedName": "Melanoma-Associated Antigen 3" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C176905", + "relatedName": "Melanoma-Astrocytoma Syndrome" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C176904", + "relatedName": "Melanoma-Pancreatic Cancer Syndrome" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C21141", + "relatedName": "Metastasis-Suppressor KiSS-1" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81756", + "relatedName": "MIR221 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C82171", + "relatedName": "MIR221 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C80700", + "relatedName": "MIRLET7A1 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81825", + "relatedName": "MIRLET7A1 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C80701", + "relatedName": "MIRLET7A3 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81826", + "relatedName": "MIRLET7A3 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C80702", + "relatedName": "MIRLET7B Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81853", + "relatedName": "MIRLET7B wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C28629", + "relatedName": "MLANA Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54313", + "relatedName": "MLANA wt Allele" + }, + { + "type": "Disease_Has_Associated_Disease", + "relatedCode": "C40001", + "relatedName": "Ovarian Dermoid Cyst with Melanoma" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C18336", + "relatedName": "RAB8A Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C52547", + "relatedName": "RAB8A wt Allele" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C84349", + "relatedName": "Tumor Suppressor ARF" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C3447", + "relatedName": "Werner Syndrome" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C20335", + "relatedName": "XRCC3 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C51014", + "relatedName": "XRCC3 wt Allele" + } + ], + "maps": [ + { + "type": "Related To", + "targetName": "8720/3", + "targetTermType": "PT", + "targetCode": "morphology", + "targetTerminology": "GDC" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "8720/3", + "targetTerminology": "ICDO3", + "targetTerminologyVersion": "3.2" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "8720/3", + "targetTerminology": "ICDO3", + "targetTerminologyVersion": "3.1" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "primary_diagnosis", + "targetTerminology": "GDC" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma, NOS", + "targetTermType": "PT", + "targetCode": "primary_diagnosis", + "targetTerminology": "GDC" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma", + "targetTermType": "LLT", + "targetCode": "10053571", + "targetTerminology": "MedDRA", + "targetTerminologyVersion": "18.1" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma", + "targetTermType": "PT", + "targetCode": "relationship_primary_diagnosis", + "targetTerminology": "GDC" + } + ] +} + diff --git a/curl-examples/samples/get-concept-by-code-inverseAssociations.txt b/curl-examples/samples/get-concept-by-code-inverseAssociations.txt index 299fbe0d..cfc572ce 100644 --- a/curl-examples/samples/get-concept-by-code-inverseAssociations.txt +++ b/curl-examples/samples/get-concept-by-code-inverseAssociations.txt @@ -1,18 +1,18 @@ -[ - { - "type": "Has_GDC_Value", - "relatedCode": "C178243", - "relatedName": "Family Cancer History Relative Primary Diagnosis Question" - }, - { - "type": "Has_GDC_Value", - "relatedCode": "C176985", - "relatedName": "Histology ICD-O Morphology Code" - }, - { - "type": "Has_GDC_Value", - "relatedCode": "C177621", - "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" - } -] - +[ + { + "type": "Has_GDC_Value", + "relatedCode": "C178243", + "relatedName": "Family Cancer History Relative Primary Diagnosis Question" + }, + { + "type": "Has_GDC_Value", + "relatedCode": "C176985", + "relatedName": "Histology ICD-O Morphology Code" + }, + { + "type": "Has_GDC_Value", + "relatedCode": "C177621", + "relatedName": "ICD-O-3 Morphology Term Diagnosis Question" + } +] + diff --git a/curl-examples/samples/get-concept-by-code-inverseRoles.txt b/curl-examples/samples/get-concept-by-code-inverseRoles.txt index dee4bd9b..5f5a9501 100644 --- a/curl-examples/samples/get-concept-by-code-inverseRoles.txt +++ b/curl-examples/samples/get-concept-by-code-inverseRoles.txt @@ -1,268 +1,268 @@ -[ - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C21390", - "relatedName": "Beta/Gamma Crystallin Domain-Containing Protein 1" - }, - { - "type": "Disease_May_Have_Associated_Disease", - "relatedCode": "C36101", - "relatedName": "BRCA2-Associated Hereditary Breast and Ovarian Cancer Syndrome" - }, - { - "type": "Regimen_Has_Accepted_Use_For_Disease", - "relatedCode": "C10303", - "relatedName": "CDB Regimen" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C26083", - "relatedName": "Chondroitin Sulfate Proteoglycan 4" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C21389", - "relatedName": "CRYBG1 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C54321", - "relatedName": "CRYBG1 wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C21470", - "relatedName": "CSAG2 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C54542", - "relatedName": "CSAG2 wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C81903", - "relatedName": "CSAG3 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C81904", - "relatedName": "CSAG3 wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C24316", - "relatedName": "CSPG4 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C52436", - "relatedName": "CSPG4 wt Allele" - }, - { - "type": "Regimen_Has_Accepted_Use_For_Disease", - "relatedCode": "C63525", - "relatedName": "CVD Regimen" - }, - { - "type": "Regimen_Has_Accepted_Use_For_Disease", - "relatedCode": "C63785", - "relatedName": "CVD-Aldesleukin-Interferon Alfa-2b Regimen" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C17680", - "relatedName": "Cyclin-Dependent Kinase 4" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C17786", - "relatedName": "Cyclin-Dependent Kinase Inhibitor 2A" - }, - { - "type": "Regimen_Has_Accepted_Use_For_Disease", - "relatedCode": "C63782", - "relatedName": "Dacarbazine/Interferon Alfa Regimen" - }, - { - "type": "Regimen_Has_Accepted_Use_For_Disease", - "relatedCode": "C63781", - "relatedName": "Dartmouth Regimen" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C82885", - "relatedName": "DCT Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C82886", - "relatedName": "DCT wt Allele" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C21569", - "relatedName": "DNA Repair Protein XRCC3" - }, - { - "type": "Disease_May_Have_Associated_Disease", - "relatedCode": "C27264", - "relatedName": "Hereditary Atypical Mole Melanoma Syndrome" - }, - { - "type": "Disease_May_Have_Associated_Disease", - "relatedCode": "C8495", - "relatedName": "Hereditary Retinoblastoma" - }, - { - "type": "Disease_May_Have_Associated_Disease", - "relatedCode": "C192671", - "relatedName": "Hereditary Tumor Syndrome Associated with Homologous Recombination Pathway Mutations" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C20765", - "relatedName": "KISS1 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C54288", - "relatedName": "KISS1 wt Allele" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C2646", - "relatedName": "L-Dopachrome Tautomerase" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C26331", - "relatedName": "Latent-Transforming Growth Factor Beta-Binding Protein 2" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C24561", - "relatedName": "LTBP2 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C51270", - "relatedName": "LTBP2 wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C21261", - "relatedName": "MCAM Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C54308", - "relatedName": "MCAM wt Allele" - }, - { - "type": "Gene_Product_Is_Biomarker_Of", - "relatedCode": "C17513", - "relatedName": "Melanoma-Associated Antigen 3" - }, - { - "type": "Disease_May_Have_Associated_Disease", - "relatedCode": "C176905", - "relatedName": "Melanoma-Astrocytoma Syndrome" - }, - { - "type": "Disease_May_Have_Associated_Disease", - "relatedCode": "C176904", - "relatedName": "Melanoma-Pancreatic Cancer Syndrome" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C21141", - "relatedName": "Metastasis-Suppressor KiSS-1" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C81756", - "relatedName": "MIR221 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C82171", - "relatedName": "MIR221 wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C80700", - "relatedName": "MIRLET7A1 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C81825", - "relatedName": "MIRLET7A1 wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C80701", - "relatedName": "MIRLET7A3 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C81826", - "relatedName": "MIRLET7A3 wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C80702", - "relatedName": "MIRLET7B Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C81853", - "relatedName": "MIRLET7B wt Allele" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C28629", - "relatedName": "MLANA Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C54313", - "relatedName": "MLANA wt Allele" - }, - { - "type": "Disease_Has_Associated_Disease", - "relatedCode": "C40001", - "relatedName": "Ovarian Dermoid Cyst with Melanoma" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C18336", - "relatedName": "RAB8A Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C52547", - "relatedName": "RAB8A wt Allele" - }, - { - "type": "Gene_Product_Malfunction_Associated_With_Disease", - "relatedCode": "C84349", - "relatedName": "Tumor Suppressor ARF" - }, - { - "type": "Disease_May_Have_Associated_Disease", - "relatedCode": "C3447", - "relatedName": "Werner Syndrome" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C20335", - "relatedName": "XRCC3 Gene" - }, - { - "type": "Gene_Associated_With_Disease", - "relatedCode": "C51014", - "relatedName": "XRCC3 wt Allele" - } -] - +[ + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C21390", + "relatedName": "Beta/Gamma Crystallin Domain-Containing Protein 1" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C36101", + "relatedName": "BRCA2-Associated Hereditary Breast and Ovarian Cancer Syndrome" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C10303", + "relatedName": "CDB Regimen" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C26083", + "relatedName": "Chondroitin Sulfate Proteoglycan 4" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C21389", + "relatedName": "CRYBG1 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54321", + "relatedName": "CRYBG1 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C21470", + "relatedName": "CSAG2 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54542", + "relatedName": "CSAG2 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81903", + "relatedName": "CSAG3 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81904", + "relatedName": "CSAG3 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C24316", + "relatedName": "CSPG4 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C52436", + "relatedName": "CSPG4 wt Allele" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63525", + "relatedName": "CVD Regimen" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63785", + "relatedName": "CVD-Aldesleukin-Interferon Alfa-2b Regimen" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C17680", + "relatedName": "Cyclin-Dependent Kinase 4" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C17786", + "relatedName": "Cyclin-Dependent Kinase Inhibitor 2A" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63782", + "relatedName": "Dacarbazine/Interferon Alfa Regimen" + }, + { + "type": "Regimen_Has_Accepted_Use_For_Disease", + "relatedCode": "C63781", + "relatedName": "Dartmouth Regimen" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C82885", + "relatedName": "DCT Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C82886", + "relatedName": "DCT wt Allele" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C21569", + "relatedName": "DNA Repair Protein XRCC3" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C27264", + "relatedName": "Hereditary Atypical Mole Melanoma Syndrome" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C8495", + "relatedName": "Hereditary Retinoblastoma" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C192671", + "relatedName": "Hereditary Tumor Syndrome Associated with Homologous Recombination Pathway Mutations" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C20765", + "relatedName": "KISS1 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54288", + "relatedName": "KISS1 wt Allele" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C2646", + "relatedName": "L-Dopachrome Tautomerase" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C26331", + "relatedName": "Latent-Transforming Growth Factor Beta-Binding Protein 2" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C24561", + "relatedName": "LTBP2 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C51270", + "relatedName": "LTBP2 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C21261", + "relatedName": "MCAM Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54308", + "relatedName": "MCAM wt Allele" + }, + { + "type": "Gene_Product_Is_Biomarker_Of", + "relatedCode": "C17513", + "relatedName": "Melanoma-Associated Antigen 3" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C176905", + "relatedName": "Melanoma-Astrocytoma Syndrome" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C176904", + "relatedName": "Melanoma-Pancreatic Cancer Syndrome" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C21141", + "relatedName": "Metastasis-Suppressor KiSS-1" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81756", + "relatedName": "MIR221 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C82171", + "relatedName": "MIR221 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C80700", + "relatedName": "MIRLET7A1 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81825", + "relatedName": "MIRLET7A1 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C80701", + "relatedName": "MIRLET7A3 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81826", + "relatedName": "MIRLET7A3 wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C80702", + "relatedName": "MIRLET7B Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C81853", + "relatedName": "MIRLET7B wt Allele" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C28629", + "relatedName": "MLANA Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C54313", + "relatedName": "MLANA wt Allele" + }, + { + "type": "Disease_Has_Associated_Disease", + "relatedCode": "C40001", + "relatedName": "Ovarian Dermoid Cyst with Melanoma" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C18336", + "relatedName": "RAB8A Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C52547", + "relatedName": "RAB8A wt Allele" + }, + { + "type": "Gene_Product_Malfunction_Associated_With_Disease", + "relatedCode": "C84349", + "relatedName": "Tumor Suppressor ARF" + }, + { + "type": "Disease_May_Have_Associated_Disease", + "relatedCode": "C3447", + "relatedName": "Werner Syndrome" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C20335", + "relatedName": "XRCC3 Gene" + }, + { + "type": "Gene_Associated_With_Disease", + "relatedCode": "C51014", + "relatedName": "XRCC3 wt Allele" + } +] + diff --git a/curl-examples/samples/get-concept-by-code-maps.txt b/curl-examples/samples/get-concept-by-code-maps.txt index 189e22db..b2a41d2f 100644 --- a/curl-examples/samples/get-concept-by-code-maps.txt +++ b/curl-examples/samples/get-concept-by-code-maps.txt @@ -1,55 +1,55 @@ -[ - { - "type": "Related To", - "targetName": "8720/3", - "targetTermType": "PT", - "targetCode": "morphology", - "targetTerminology": "GDC" - }, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "8720/3", - "targetTerminology": "ICDO3", - "targetTerminologyVersion": "3.2" - }, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "8720/3", - "targetTerminology": "ICDO3", - "targetTerminologyVersion": "3.1" - }, - { - "type": "Related To", - "targetName": "Malignant melanoma, NOS", - "targetTermType": "PT", - "targetCode": "primary_diagnosis", - "targetTerminology": "GDC" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma, NOS", - "targetTermType": "PT", - "targetCode": "primary_diagnosis", - "targetTerminology": "GDC" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma", - "targetTermType": "LLT", - "targetCode": "10053571", - "targetTerminology": "MedDRA", - "targetTerminologyVersion": "18.1" - }, - { - "type": "Has Synonym", - "targetName": "Melanoma", - "targetTermType": "PT", - "targetCode": "relationship_primary_diagnosis", - "targetTerminology": "GDC" - } -] - +[ + { + "type": "Related To", + "targetName": "8720/3", + "targetTermType": "PT", + "targetCode": "morphology", + "targetTerminology": "GDC" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "8720/3", + "targetTerminology": "ICDO3", + "targetTerminologyVersion": "3.2" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "8720/3", + "targetTerminology": "ICDO3", + "targetTerminologyVersion": "3.1" + }, + { + "type": "Related To", + "targetName": "Malignant melanoma, NOS", + "targetTermType": "PT", + "targetCode": "primary_diagnosis", + "targetTerminology": "GDC" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma, NOS", + "targetTermType": "PT", + "targetCode": "primary_diagnosis", + "targetTerminology": "GDC" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma", + "targetTermType": "LLT", + "targetCode": "10053571", + "targetTerminology": "MedDRA", + "targetTerminologyVersion": "18.1" + }, + { + "type": "Has Synonym", + "targetName": "Melanoma", + "targetTermType": "PT", + "targetCode": "relationship_primary_diagnosis", + "targetTerminology": "GDC" + } +] + diff --git a/curl-examples/samples/get-concept-by-code-minimum.txt b/curl-examples/samples/get-concept-by-code-minimum.txt index 5afd9302..d5767e22 100644 --- a/curl-examples/samples/get-concept-by-code-minimum.txt +++ b/curl-examples/samples/get-concept-by-code-minimum.txt @@ -1,10 +1,10 @@ -{ - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true -} - +{ + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true +} + diff --git a/curl-examples/samples/get-concept-by-code-parents.txt b/curl-examples/samples/get-concept-by-code-parents.txt index 66aa59ab..8b93a554 100644 --- a/curl-examples/samples/get-concept-by-code-parents.txt +++ b/curl-examples/samples/get-concept-by-code-parents.txt @@ -1,11 +1,11 @@ -[ - { - "code": "C9305", - "name": "Malignant Neoplasm" - }, - { - "code": "C7058", - "name": "Melanocytic Neoplasm" - } -] - +[ + { + "code": "C9305", + "name": "Malignant Neoplasm" + }, + { + "code": "C7058", + "name": "Melanocytic Neoplasm" + } +] + diff --git a/curl-examples/samples/get-concept-by-code-roles.txt b/curl-examples/samples/get-concept-by-code-roles.txt index 159466e8..6976608a 100644 --- a/curl-examples/samples/get-concept-by-code-roles.txt +++ b/curl-examples/samples/get-concept-by-code-roles.txt @@ -1,48 +1,48 @@ -[ - { - "type": "Disease_Excludes_Finding", - "relatedCode": "C36122", - "relatedName": "Benign Cellular Infiltrate" - }, - { - "type": "Disease_May_Have_Finding", - "relatedCode": "C43268", - "relatedName": "HMB-45-Positive Neoplastic Cells Present" - }, - { - "type": "Disease_Has_Abnormal_Cell", - "relatedCode": "C12917", - "relatedName": "Malignant Cell" - }, - { - "type": "Disease_Has_Finding", - "relatedCode": "C36115", - "relatedName": "Malignant Cellular Infiltrate" - }, - { - "type": "Disease_Has_Normal_Cell_Origin", - "relatedCode": "C12591", - "relatedName": "Melanocyte" - }, - { - "type": "Disease_Has_Abnormal_Cell", - "relatedCode": "C36873", - "relatedName": "Melanoma Cell" - }, - { - "type": "Disease_Has_Abnormal_Cell", - "relatedCode": "C12922", - "relatedName": "Neoplastic Cell" - }, - { - "type": "Disease_Has_Abnormal_Cell", - "relatedCode": "C36862", - "relatedName": "Neoplastic Melanocyte" - }, - { - "type": "Disease_May_Have_Finding", - "relatedCode": "C40993", - "relatedName": "S-100-Positive Neoplastic Cells Present" - } -] - +[ + { + "type": "Disease_Excludes_Finding", + "relatedCode": "C36122", + "relatedName": "Benign Cellular Infiltrate" + }, + { + "type": "Disease_May_Have_Finding", + "relatedCode": "C43268", + "relatedName": "HMB-45-Positive Neoplastic Cells Present" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C12917", + "relatedName": "Malignant Cell" + }, + { + "type": "Disease_Has_Finding", + "relatedCode": "C36115", + "relatedName": "Malignant Cellular Infiltrate" + }, + { + "type": "Disease_Has_Normal_Cell_Origin", + "relatedCode": "C12591", + "relatedName": "Melanocyte" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C36873", + "relatedName": "Melanoma Cell" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C12922", + "relatedName": "Neoplastic Cell" + }, + { + "type": "Disease_Has_Abnormal_Cell", + "relatedCode": "C36862", + "relatedName": "Neoplastic Melanocyte" + }, + { + "type": "Disease_May_Have_Finding", + "relatedCode": "C40993", + "relatedName": "S-100-Positive Neoplastic Cells Present" + } +] + diff --git a/curl-examples/samples/get-concept-by-code-summary.txt b/curl-examples/samples/get-concept-by-code-summary.txt index b50065c2..a1496988 100644 --- a/curl-examples/samples/get-concept-by-code-summary.txt +++ b/curl-examples/samples/get-concept-by-code-summary.txt @@ -1,199 +1,216 @@ -{ - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "synonyms": [ - { - "name": "Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "caDSR" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "MELANOMA, MALIGNANT", - "termType": "PT", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "Cellosaurus" - }, - { - "name": "Malignant Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CPTAC" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTEP", - "code": "10053571", - "subSource": "SDC" - }, - { - "name": "Melanoma", - "termType": "DN", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "CTRP" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "Melanoma, NOS", - "termType": "SY", - "type": "FULL_SYN", - "source": "GDC" - }, - { - "name": "melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI-GLOSS", - "code": "CDR0000045135" - }, - { - "name": "Malignant Melanoma", - "termType": "SY", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "Melanoma", - "termType": "PT", - "type": "FULL_SYN", - "source": "NICHD" - }, - { - "name": "Melanoma", - "type": "Display_Name" - }, - { - "name": "Melanoma", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A form of cancer that begins in melanocytes (cells that make the pigment melanin). It may begin in a mole (skin melanoma), but can also begin in other pigmented tissues, such as in the eye or in the intestines.", - "type": "ALT_DEFINITION", - "source": "NCI-GLOSS" - }, - { - "definition": "A malignant neoplasm composed of melanocytes.", - "type": "ALT_DEFINITION", - "source": "CDISC" - }, - { - "definition": "A malignant neoplasm comprised of melanocytes typically arising in the skin.", - "type": "ALT_DEFINITION", - "source": "NICHD" - }, - { - "definition": "A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.", - "type": "DEFINITION", - "source": "NCI" - } - ], - "properties": [ - { - "type": "Contributing_Source", - "value": "CDISC" - }, - { - "type": "Contributing_Source", - "value": "Cellosaurus" - }, - { - "type": "Contributing_Source", - "value": "CPTAC" - }, - { - "type": "Contributing_Source", - "value": "CTEP" - }, - { - "type": "Contributing_Source", - "value": "CTRP" - }, - { - "type": "Contributing_Source", - "value": "GDC" - }, - { - "type": "Contributing_Source", - "value": "MedDRA" - }, - { - "type": "Contributing_Source", - "value": "NICHD" - }, - { - "type": "ICD-O-3_Code", - "value": "8720/3" - }, - { - "type": "Legacy Concept Name", - "value": "Melanoma" - }, - { - "type": "Maps_To", - "value": "8720/3" - }, - { - "type": "Maps_To", - "value": "Malignant melanoma, NOS" - }, - { - "type": "Maps_To", - "value": "Melanoma" - }, - { - "type": "Maps_To", - "value": "Melanoma, NOS" - }, - { - "type": "Neoplastic_Status", - "value": "Malignant" - }, - { - "type": "Semantic_Type", - "value": "Neoplastic Process" - }, - { - "type": "UMLS_CUI", - "value": "C0025202" - } - ] -} - +{ + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "synonyms": [ + { + "name": "Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "caDSR" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "MELANOMA, MALIGNANT", + "termType": "PT", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "Cellosaurus" + }, + { + "name": "Malignant Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CPTAC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTEP", + "code": "10053571", + "subSource": "SDC" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "termType": "DN", + "type": "FULL_SYN", + "source": "CTRP" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "Melanoma, NOS", + "termType": "SY", + "type": "FULL_SYN", + "source": "GDC" + }, + { + "name": "melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI-GLOSS", + "code": "CDR0000045135" + }, + { + "name": "Malignant Melanoma", + "termType": "SY", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "Melanoma", + "termType": "PT", + "type": "FULL_SYN", + "source": "NICHD" + }, + { + "name": "Melanoma", + "type": "Display_Name" + }, + { + "name": "Melanoma", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A form of cancer that begins in melanocytes (cells that make the pigment melanin). It may begin in a mole (skin melanoma), but can also begin in other pigmented tissues, such as in the eye or in the intestines.", + "type": "ALT_DEFINITION", + "source": "NCI-GLOSS" + }, + { + "definition": "A malignant neoplasm composed of melanocytes.", + "type": "ALT_DEFINITION", + "source": "CDISC" + }, + { + "definition": "A malignant neoplasm comprised of melanocytes typically arising in the skin.", + "type": "ALT_DEFINITION", + "source": "NICHD" + }, + { + "definition": "A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.", + "type": "DEFINITION", + "source": "NCI" + } + ], + "properties": [ + { + "code": "P322", + "type": "Contributing_Source", + "value": "CDISC" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "Cellosaurus" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "CPTAC" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "CTEP" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "CTRP" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "GDC" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "MedDRA" + }, + { + "code": "P322", + "type": "Contributing_Source", + "value": "NICHD" + }, + { + "code": "P334", + "type": "ICD-O-3_Code", + "value": "8720/3" + }, + { + "code": "P366", + "type": "Legacy Concept Name", + "value": "Melanoma" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "8720/3" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Malignant melanoma, NOS" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Melanoma" + }, + { + "code": "P375", + "type": "Maps_To", + "value": "Melanoma, NOS" + }, + { + "code": "P363", + "type": "Neoplastic_Status", + "value": "Malignant" + }, + { + "code": "P106", + "type": "Semantic_Type", + "value": "Neoplastic Process" + }, + { + "code": "P207", + "type": "UMLS_CUI", + "value": "C0025202" + } + ] +} + diff --git a/curl-examples/samples/get-concept-descendants.txt b/curl-examples/samples/get-concept-descendants.txt index ae41ce34..1a877cd1 100644 --- a/curl-examples/samples/get-concept-descendants.txt +++ b/curl-examples/samples/get-concept-descendants.txt @@ -1,1695 +1,1845 @@ -[ - { - "code": "C4022", - "name": "Acral Lentiginous Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C204883", - "name": "Acral Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C188185", - "name": "Adrenal Cortical Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C5319", - "name": "Adult Meningeal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C212033", - "name": "Advanced Acral Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C155311", - "name": "Advanced Cutaneous Melanoma of the Extremity", - "level": 4, - "leaf": false - }, - { - "code": "C171572", - "name": "Advanced Cutaneous Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C153169", - "name": "Advanced Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C180896", - "name": "Advanced Mucosal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C180895", - "name": "Advanced Non-Cutaneous Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C190137", - "name": "Advanced Ocular Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C148515", - "name": "Advanced Uveal Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C3802", - "name": "Amelanotic Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C4639", - "name": "Anal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C4227", - "name": "Balloon Cell Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C159663", - "name": "Bladder Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C8410", - "name": "Breast Melanoma", - "level": 1, - "leaf": true - }, - { - "code": "C40239", - "name": "Cervical Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C190280", - "name": "Childhood Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C131506", - "name": "Childhood Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C5318", - "name": "Childhood Meningeal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C6102", - "name": "Choroid Epithelioid Cell Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C6100", - "name": "Choroid Intermediate Cell Type Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C4561", - "name": "Choroid Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C35782", - "name": "Choroid Mixed Epithelioid and Spindle Cell Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C6865", - "name": "Choroid Necrotic Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C6099", - "name": "Choroid Spindle Cell Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C6861", - "name": "Choroid Spindle Cell Type A Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C6862", - "name": "Choroid Spindle Cell Type B Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C140659", - "name": "Choroidal and Ciliary Body Melanoma by AJCC v8 Stage", - "level": 3, - "leaf": false - }, - { - "code": "C6119", - "name": "Ciliary Body Epithelioid Cell Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C6118", - "name": "Ciliary Body Intermediate Cell Type Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C4558", - "name": "Ciliary Body Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C35783", - "name": "Ciliary Body Mixed Epithelioid and Spindle Cell Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C6117", - "name": "Ciliary Body Spindle Cell Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C6864", - "name": "Ciliary Body Spindle Cell Type A Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C6863", - "name": "Ciliary Body Spindle Cell Type B Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C137647", - "name": "Clinical Stage 0 Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": true - }, - { - "code": "C137648", - "name": "Clinical Stage I Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": false - }, - { - "code": "C137649", - "name": "Clinical Stage IA Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137650", - "name": "Clinical Stage IB Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137651", - "name": "Clinical Stage II Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": false - }, - { - "code": "C137652", - "name": "Clinical Stage IIA Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137653", - "name": "Clinical Stage IIB Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137654", - "name": "Clinical Stage IIC Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137655", - "name": "Clinical Stage III Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": true - }, - { - "code": "C137656", - "name": "Clinical Stage IV Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": true - }, - { - "code": "C213201", - "name": "Conjunctival Amelanotic Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C204981", - "name": "Conjunctival Melanoma In Situ", - "level": 3, - "leaf": true - }, - { - "code": "C4550", - "name": "Conjunctival Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C213202", - "name": "Conjunctival Mixed Epithelioid and Spindle Cell Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C213200", - "name": "Conjunctival Nodular Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C4553", - "name": "Corneal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C4633", - "name": "Cutaneous Amelanotic Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C90514", - "name": "Cutaneous Melanoma by AJCC v6 Stage", - "level": 2, - "leaf": false - }, - { - "code": "C91231", - "name": "Cutaneous Melanoma by AJCC v7 Stage", - "level": 2, - "leaf": false - }, - { - "code": "C137646", - "name": "Cutaneous Melanoma by AJCC v8 Clinical Stage", - "level": 3, - "leaf": false - }, - { - "code": "C137657", - "name": "Cutaneous Melanoma by AJCC v8 Pathologic Stage", - "level": 3, - "leaf": false - }, - { - "code": "C137645", - "name": "Cutaneous Melanoma by AJCC v8 Stage", - "level": 2, - "leaf": false - }, - { - "code": "C155305", - "name": "Cutaneous Melanoma of the Extremity", - "level": 2, - "leaf": false - }, - { - "code": "C3510", - "name": "Cutaneous Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C4225", - "name": "Cutaneous Nodular Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C165497", - "name": "Cutaneous Spitz Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C205127", - "name": "De Novo Nodular Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C205129", - "name": "Dermal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C37257", - "name": "Desmoplastic Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C48614", - "name": "Desmoplastic Neurotropic Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C4236", - "name": "Epithelioid Cell Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C5707", - "name": "Esophageal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C4358", - "name": "Eyelid Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C5735", - "name": "Gallbladder Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C178519", - "name": "Gastric Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C133187", - "name": "Head and Neck Mucosal Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C207624", - "name": "Hereditary Melanoma with CDK4 Mutation", - "level": 3, - "leaf": true - }, - { - "code": "C128801", - "name": "Hereditary Melanoma with CDKN2A Mutation", - "level": 3, - "leaf": true - }, - { - "code": "C8498", - "name": "Hereditary Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C165659", - "name": "High-CSD Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C5442", - "name": "Intracranial Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C48607", - "name": "Invasive Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C190746", - "name": "Iridociliary Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C174498", - "name": "Iris Epithelioid Cell Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C6101", - "name": "Iris Intermediate Cell Type Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C9088", - "name": "Iris Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C174506", - "name": "Iris Mixed Epithelioid and Spindle Cell Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C6098", - "name": "Iris Spindle Cell Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C188067", - "name": "Jejunal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C175345", - "name": "Lacrimal Drainage System Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C9151", - "name": "Lentigo Maligna Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C43372", - "name": "Lentigo Maligna", - "level": 4, - "leaf": true - }, - { - "code": "C171285", - "name": "Locally Advanced Cutaneous Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C148494", - "name": "Locally Advanced Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C209346", - "name": "Locally Advanced Mucosal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C171297", - "name": "Locally Advanced Non-Cutaneous Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C171296", - "name": "Locally Advanced Ocular Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C190138", - "name": "Locally Advanced Unresectable Uveal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C204843", - "name": "Low-CSD Melanoma, Superficial Spreading Melanoma Subtype", - "level": 4, - "leaf": true - }, - { - "code": "C9152", - "name": "Low-CSD Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C45652", - "name": "Lung Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C213491", - "name": "Mediastinal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C9090", - "name": "Medium/Large Size Posterior Uveal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C4240", - "name": "Melanoma Arising in Blue Nevus", - "level": 2, - "leaf": true - }, - { - "code": "C48613", - "name": "Melanoma Arising in Congenital Melanocytic Nevus", - "level": 2, - "leaf": false - }, - { - "code": "C4235", - "name": "Melanoma Arising in Giant Congenital Nevus", - "level": 3, - "leaf": true - }, - { - "code": "C204864", - "name": "Melanoma in Chronically Sun-Exposed Skin", - "level": 2, - "leaf": false - }, - { - "code": "C204840", - "name": "Melanoma in Intermittently Sun-Exposed Skin", - "level": 2, - "leaf": false - }, - { - "code": "C4232", - "name": "Melanoma in Junctional Nevus", - "level": 2, - "leaf": true - }, - { - "code": "C66753", - "name": "Melanoma in Precancerous Melanosis", - "level": 2, - "leaf": true - }, - { - "code": "C154473", - "name": "Melanoma of Unknown Primary", - "level": 2, - "leaf": true - }, - { - "code": "C5317", - "name": "Meningeal Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C179427", - "name": "Metastatic Acral Lentiginous Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C212032", - "name": "Metastatic Acral Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C169085", - "name": "Metastatic Choroid Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C182127", - "name": "Metastatic Conjunctival Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C212038", - "name": "Metastatic Cutaneous Melanoma of the Extremity", - "level": 3, - "leaf": false - }, - { - "code": "C156072", - "name": "Metastatic Cutaneous Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C213510", - "name": "Metastatic Melanoma in the Bone", - "level": 2, - "leaf": false - }, - { - "code": "C179206", - "name": "Metastatic Melanoma in the Brain", - "level": 3, - "leaf": true - }, - { - "code": "C133504", - "name": "Metastatic Melanoma in the Central Nervous System", - "level": 2, - "leaf": false - }, - { - "code": "C205131", - "name": "Metastatic Melanoma in the Lymph Nodes", - "level": 2, - "leaf": true - }, - { - "code": "C205130", - "name": "Metastatic Melanoma in the Skin", - "level": 2, - "leaf": true - }, - { - "code": "C213511", - "name": "Metastatic Melanoma in the Temporal Bone", - "level": 3, - "leaf": true - }, - { - "code": "C205132", - "name": "Metastatic Melanoma in the Viscera", - "level": 2, - "leaf": true - }, - { - "code": "C8925", - "name": "Metastatic Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C169086", - "name": "Metastatic Mucosal Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C7092", - "name": "Metastatic Non-Cutaneous Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C213776", - "name": "Metastatic Non-Sun Exposed Skin Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C171295", - "name": "Metastatic Ocular Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C148514", - "name": "Metastatic Uveal Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C48612", - "name": "Minimal Deviation Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C66756", - "name": "Mixed Epithelioid and Spindle Cell Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C48622", - "name": "Mucosal Lentiginous Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C7091", - "name": "Mucosal Melanoma of the Digestive System", - "level": 3, - "leaf": false - }, - { - "code": "C178437", - "name": "Mucosal Melanoma of the Female Genital Tract", - "level": 4, - "leaf": false - }, - { - "code": "C178443", - "name": "Mucosal Melanoma of the Genitourinary System", - "level": 3, - "leaf": false - }, - { - "code": "C133186", - "name": "Mucosal Melanoma of the Head and Neck by AJCC v7 Stage", - "level": 4, - "leaf": false - }, - { - "code": "C178453", - "name": "Mucosal Melanoma of the Urinary System", - "level": 4, - "leaf": false - }, - { - "code": "C114828", - "name": "Mucosal Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C166405", - "name": "Mucosal Nodular Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C204889", - "name": "Nail Apparatus Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C178522", - "name": "Nasopharyngeal Mucosal Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C54662", - "name": "Nevoid Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C205125", - "name": "Nodular Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C8711", - "name": "Non-Cutaneous Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C213774", - "name": "Non-Sun Exposed Skin Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C7913", - "name": "Ocular Melanoma with Extraocular Extension", - "level": 2, - "leaf": true - }, - { - "code": "C8562", - "name": "Ocular Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C27919", - "name": "Old Burn Scar-Related Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C209348", - "name": "Oligometastatic Cutaneous Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C5915", - "name": "Oral Cavity Mucosal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C118828", - "name": "Orbital Melanoma", - "level": 1, - "leaf": true - }, - { - "code": "C178441", - "name": "Ovarian Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C213517", - "name": "Parotid Gland Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C137662", - "name": "Pathologic Stage 0 Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": true - }, - { - "code": "C137663", - "name": "Pathologic Stage I Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": false - }, - { - "code": "C137664", - "name": "Pathologic Stage IA Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137665", - "name": "Pathologic Stage IB Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137666", - "name": "Pathologic Stage II Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": false - }, - { - "code": "C137667", - "name": "Pathologic Stage IIA Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137668", - "name": "Pathologic Stage IIB Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137669", - "name": "Pathologic Stage IIC Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137670", - "name": "Pathologic Stage III Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": false - }, - { - "code": "C137671", - "name": "Pathologic Stage IIIA Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137672", - "name": "Pathologic Stage IIIB Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137673", - "name": "Pathologic Stage IIIC Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137675", - "name": "Pathologic Stage IIID Cutaneous Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C137677", - "name": "Pathologic Stage IV Cutaneous Melanoma AJCC v8", - "level": 4, - "leaf": true - }, - { - "code": "C178518", - "name": "Penile Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C162547", - "name": "Penile Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C178517", - "name": "Penile Mucosal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C178521", - "name": "Pharyngeal Mucosal Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C161611", - "name": "Prostate Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C188079", - "name": "Rectal Epithelioid Cell Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C4640", - "name": "Rectal Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C175435", - "name": "Recurrent Acral Lentiginous Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C155306", - "name": "Recurrent Cutaneous Melanoma of the Extremity", - "level": 3, - "leaf": false - }, - { - "code": "C9097", - "name": "Recurrent Cutaneous Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C8785", - "name": "Recurrent Lentigo Maligna Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C7087", - "name": "Recurrent Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C182020", - "name": "Recurrent Metastatic Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C170954", - "name": "Recurrent Mucosal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C7088", - "name": "Recurrent Non-Cutaneous Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C171294", - "name": "Recurrent Ocular Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C7914", - "name": "Recurrent Uveal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C150544", - "name": "Refractory Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C147983", - "name": "Refractory Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C182024", - "name": "Refractory Metastatic Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C180894", - "name": "Refractory Mucosal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C173328", - "name": "Refractory Non-Cutaneous Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C173329", - "name": "Refractory Ocular Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C173335", - "name": "Refractory Uveal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C7089", - "name": "Regressing Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C4228", - "name": "Regressing Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C7090", - "name": "Regressing Non-Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C190240", - "name": "Resectable Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C190239", - "name": "Resectable Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C8601", - "name": "Retinal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C7361", - "name": "Scrotal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C54663", - "name": "Signet Ring Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C166399", - "name": "Sinonasal Mucosal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C9089", - "name": "Small Size Posterior Uveal Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C27920", - "name": "Solar Radiation-Related Cutaneous Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C5158", - "name": "Spinal Cord Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C4237", - "name": "Spindle Cell Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C8423", - "name": "Stage 0 Cutaneous Melanoma AJCC v6 and v7", - "level": 3, - "leaf": false - }, - { - "code": "C8781", - "name": "Stage I Acral Lentiginous Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C140660", - "name": "Stage I Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 4, - "leaf": true - }, - { - "code": "C7916", - "name": "Stage I Cutaneous Melanoma AJCC v6", - "level": 3, - "leaf": true - }, - { - "code": "C88414", - "name": "Stage I Cutaneous Melanoma AJCC v7", - "level": 3, - "leaf": false - }, - { - "code": "C8786", - "name": "Stage I Lentigo Maligna Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C8790", - "name": "Stage I Low-CSD Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C5577", - "name": "Stage I Uveal Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C86026", - "name": "Stage IA Cutaneous Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C86030", - "name": "Stage IB Cutaneous Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C8782", - "name": "Stage II Acral Lentiginous Melanoma AJCC v6 and v7", - "level": 4, - "leaf": true - }, - { - "code": "C140661", - "name": "Stage II Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 4, - "leaf": false - }, - { - "code": "C7917", - "name": "Stage II Cutaneous Melanoma AJCC v6 and v7", - "level": 3, - "leaf": false - }, - { - "code": "C8787", - "name": "Stage II Lentigo Maligna Melanoma AJCC v6 and v7", - "level": 4, - "leaf": true - }, - { - "code": "C8791", - "name": "Stage II Low-CSD Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C5578", - "name": "Stage II Uveal Melanoma AJCC v7", - "level": 4, - "leaf": false - }, - { - "code": "C140662", - "name": "Stage IIA Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C86033", - "name": "Stage IIA Cutaneous Melanoma AJCC v6 and v7", - "level": 4, - "leaf": true - }, - { - "code": "C88135", - "name": "Stage IIA Uveal Melanoma AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C140663", - "name": "Stage IIB Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C27742", - "name": "Stage IIB Cutaneous Melanoma AJCC v6 and v7", - "level": 4, - "leaf": true - }, - { - "code": "C88136", - "name": "Stage IIB Uveal Melanoma AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C86034", - "name": "Stage IIC Cutaneous Melanoma AJCC v6 and v7", - "level": 4, - "leaf": true - }, - { - "code": "C8783", - "name": "Stage III Acral Lentiginous Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C140664", - "name": "Stage III Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 4, - "leaf": false - }, - { - "code": "C7918", - "name": "Stage III Cutaneous Melanoma AJCC v6", - "level": 3, - "leaf": true - }, - { - "code": "C88415", - "name": "Stage III Cutaneous Melanoma AJCC v7", - "level": 3, - "leaf": false - }, - { - "code": "C8788", - "name": "Stage III Lentigo Maligna Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C8792", - "name": "Stage III Low-CSD Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C87532", - "name": "Stage III Mucosal Melanoma of the Head and Neck AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C5579", - "name": "Stage III Uveal Melanoma AJCC v7", - "level": 4, - "leaf": false - }, - { - "code": "C140665", - "name": "Stage IIIA Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C86049", - "name": "Stage IIIA Cutaneous Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C88137", - "name": "Stage IIIA Uveal Melanoma AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C140666", - "name": "Stage IIIB Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C86051", - "name": "Stage IIIB Cutaneous Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C88138", - "name": "Stage IIIB Uveal Melanoma AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C140667", - "name": "Stage IIIC Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 5, - "leaf": true - }, - { - "code": "C86053", - "name": "Stage IIIC Cutaneous Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C88139", - "name": "Stage IIIC Uveal Melanoma AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C8784", - "name": "Stage IV Acral Lentiginous Melanoma AJCC v6 and v7", - "level": 4, - "leaf": true - }, - { - "code": "C140668", - "name": "Stage IV Choroidal and Ciliary Body Melanoma AJCC v8", - "level": 4, - "leaf": true - }, - { - "code": "C9096", - "name": "Stage IV Cutaneous Melanoma AJCC v6 and v7", - "level": 3, - "leaf": false - }, - { - "code": "C8789", - "name": "Stage IV Lentigo Maligna Melanoma AJCC v6 and v7", - "level": 4, - "leaf": true - }, - { - "code": "C8793", - "name": "Stage IV Low-CSD Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C5580", - "name": "Stage IV Uveal Melanoma AJCC v7", - "level": 4, - "leaf": true - }, - { - "code": "C87533", - "name": "Stage IVA Mucosal Melanoma of the Head and Neck AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C87534", - "name": "Stage IVB Mucosal Melanoma of the Head and Neck AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C87535", - "name": "Stage IVC Mucosal Melanoma of the Head and Neck AJCC v7", - "level": 5, - "leaf": true - }, - { - "code": "C204887", - "name": "Subungual Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C213513", - "name": "Temporal Bone Mucosal Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C4238", - "name": "Type A Spindle Cell Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C4239", - "name": "Type B Spindle Cell Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C165535", - "name": "Unresectable Acral Lentiginous Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C213771", - "name": "Unresectable Acral Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C148245", - "name": "Unresectable Cutaneous Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C148517", - "name": "Unresectable Melanoma", - "level": 1, - "leaf": false - }, - { - "code": "C165536", - "name": "Unresectable Mucosal Melanoma", - "level": 2, - "leaf": true - }, - { - "code": "C213775", - "name": "Unresectable Non-Sun Exposed Skin Melanoma", - "level": 3, - "leaf": true - }, - { - "code": "C172247", - "name": "Unresectable Uveal Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C159665", - "name": "Urethral Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C111020", - "name": "Uveal Class 1 Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C111022", - "name": "Uveal Class 1a Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C111023", - "name": "Uveal Class 1b Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C111021", - "name": "Uveal Class 2 Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C35780", - "name": "Uveal Epithelioid Cell Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C7989", - "name": "Uveal Intermediate Cell Type Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C140672", - "name": "Uveal Melanoma by AJCC v7 Stage", - "level": 3, - "leaf": false - }, - { - "code": "C111030", - "name": "Uveal Melanoma by Gene Expression Profile", - "level": 3, - "leaf": false - }, - { - "code": "C150130", - "name": "Uveal Melanoma Metastatic in the Liver", - "level": 5, - "leaf": true - }, - { - "code": "C7712", - "name": "Uveal Melanoma", - "level": 2, - "leaf": false - }, - { - "code": "C35781", - "name": "Uveal Mixed Epithelioid and Spindle Cell Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C7990", - "name": "Uveal Necrotic Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C7986", - "name": "Uveal Spindle Cell Melanoma", - "level": 3, - "leaf": false - }, - { - "code": "C7987", - "name": "Uveal Spindle Cell Type A Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C7988", - "name": "Uveal Spindle Cell Type B Melanoma", - "level": 4, - "leaf": false - }, - { - "code": "C27394", - "name": "Vaginal Melanoma", - "level": 5, - "leaf": true - }, - { - "code": "C204888", - "name": "Volar Melanoma", - "level": 4, - "leaf": true - }, - { - "code": "C40329", - "name": "Vulvar Melanoma", - "level": 5, - "leaf": true - } -] - +[ + { + "code": "C4022", + "name": "Acral Lentiginous Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C204883", + "name": "Acral Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C188185", + "name": "Adrenal Cortical Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C5319", + "name": "Adult Meningeal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C212033", + "name": "Advanced Acral Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C155311", + "name": "Advanced Cutaneous Melanoma of the Extremity", + "level": 4, + "leaf": false + }, + { + "code": "C171572", + "name": "Advanced Cutaneous Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C153169", + "name": "Advanced Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C180896", + "name": "Advanced Mucosal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C180895", + "name": "Advanced Non-Cutaneous Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C190137", + "name": "Advanced Ocular Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C148515", + "name": "Advanced Uveal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C3802", + "name": "Amelanotic Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C4639", + "name": "Anal Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C215226", + "name": "Anorectal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C4227", + "name": "Balloon Cell Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C159663", + "name": "Bladder Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C8410", + "name": "Breast Melanoma", + "level": 1, + "leaf": true + }, + { + "code": "C40239", + "name": "Cervical Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C190280", + "name": "Childhood Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C131506", + "name": "Childhood Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C5318", + "name": "Childhood Meningeal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C6102", + "name": "Choroid Epithelioid Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C6100", + "name": "Choroid Intermediate Cell Type Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C4561", + "name": "Choroid Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C35782", + "name": "Choroid Mixed Epithelioid and Spindle Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C6865", + "name": "Choroid Necrotic Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C6099", + "name": "Choroid Spindle Cell Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C6861", + "name": "Choroid Spindle Cell Type A Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C6862", + "name": "Choroid Spindle Cell Type B Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C140659", + "name": "Choroidal and Ciliary Body Melanoma by AJCC v8 Stage", + "level": 3, + "leaf": false + }, + { + "code": "C6119", + "name": "Ciliary Body Epithelioid Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C6118", + "name": "Ciliary Body Intermediate Cell Type Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C4558", + "name": "Ciliary Body Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C35783", + "name": "Ciliary Body Mixed Epithelioid and Spindle Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C6117", + "name": "Ciliary Body Spindle Cell Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C6864", + "name": "Ciliary Body Spindle Cell Type A Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C6863", + "name": "Ciliary Body Spindle Cell Type B Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C137647", + "name": "Clinical Stage 0 Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": true + }, + { + "code": "C137648", + "name": "Clinical Stage I Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": false + }, + { + "code": "C137649", + "name": "Clinical Stage IA Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137650", + "name": "Clinical Stage IB Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137651", + "name": "Clinical Stage II Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": false + }, + { + "code": "C137652", + "name": "Clinical Stage IIA Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137653", + "name": "Clinical Stage IIB Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137654", + "name": "Clinical Stage IIC Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137655", + "name": "Clinical Stage III Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": true + }, + { + "code": "C137656", + "name": "Clinical Stage IV Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": true + }, + { + "code": "C213201", + "name": "Conjunctival Amelanotic Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C204981", + "name": "Conjunctival Melanoma In Situ", + "level": 4, + "leaf": true + }, + { + "code": "C4550", + "name": "Conjunctival Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C213202", + "name": "Conjunctival Mixed Epithelioid and Spindle Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C213200", + "name": "Conjunctival Nodular Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C4553", + "name": "Corneal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C4633", + "name": "Cutaneous Amelanotic Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C90514", + "name": "Cutaneous Melanoma by AJCC v6 Stage", + "level": 2, + "leaf": false + }, + { + "code": "C91231", + "name": "Cutaneous Melanoma by AJCC v7 Stage", + "level": 2, + "leaf": false + }, + { + "code": "C137646", + "name": "Cutaneous Melanoma by AJCC v8 Clinical Stage", + "level": 3, + "leaf": false + }, + { + "code": "C137657", + "name": "Cutaneous Melanoma by AJCC v8 Pathologic Stage", + "level": 3, + "leaf": false + }, + { + "code": "C137645", + "name": "Cutaneous Melanoma by AJCC v8 Stage", + "level": 2, + "leaf": false + }, + { + "code": "C155305", + "name": "Cutaneous Melanoma of the Extremity", + "level": 2, + "leaf": false + }, + { + "code": "C3510", + "name": "Cutaneous Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C4225", + "name": "Cutaneous Nodular Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C165497", + "name": "Cutaneous Spitz Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C205127", + "name": "De Novo Nodular Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C205129", + "name": "Dermal Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C37257", + "name": "Desmoplastic Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C48614", + "name": "Desmoplastic Neurotropic Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C7091", + "name": "Digestive System Mucosal Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C4236", + "name": "Epithelioid Cell Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C5707", + "name": "Esophageal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C4358", + "name": "Eyelid Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C178437", + "name": "Female Genital Tract Mucosal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C5735", + "name": "Gallbladder Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C178519", + "name": "Gastric Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C178443", + "name": "Genitourinary System Mucosal Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C133186", + "name": "Head and Neck Mucosal Melanoma by AJCC v7 Stage", + "level": 4, + "leaf": false + }, + { + "code": "C133187", + "name": "Head and Neck Mucosal Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C207624", + "name": "Hereditary Melanoma with CDK4 Mutation", + "level": 3, + "leaf": true + }, + { + "code": "C128801", + "name": "Hereditary Melanoma with CDKN2A Mutation", + "level": 3, + "leaf": true + }, + { + "code": "C8498", + "name": "Hereditary Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C165659", + "name": "High-CSD Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C5442", + "name": "Intracranial Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C48607", + "name": "Invasive Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C190746", + "name": "Iridociliary Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C174498", + "name": "Iris Epithelioid Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C6101", + "name": "Iris Intermediate Cell Type Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C9088", + "name": "Iris Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C174506", + "name": "Iris Mixed Epithelioid and Spindle Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C6098", + "name": "Iris Spindle Cell Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C188067", + "name": "Jejunal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C175345", + "name": "Lacrimal Drainage System Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C9151", + "name": "Lentigo Maligna Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C43372", + "name": "Lentigo Maligna", + "level": 4, + "leaf": true + }, + { + "code": "C217198", + "name": "Localized Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C217197", + "name": "Localized Uveal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C214940", + "name": "Locally Advanced Acral Melanoma", + "level": 5, + "leaf": false + }, + { + "code": "C214941", + "name": "Locally Advanced Conjunctival Melanoma", + "level": 5, + "leaf": false + }, + { + "code": "C171285", + "name": "Locally Advanced Cutaneous Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C148494", + "name": "Locally Advanced Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C209346", + "name": "Locally Advanced Mucosal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C171297", + "name": "Locally Advanced Non-Cutaneous Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C171296", + "name": "Locally Advanced Ocular Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C214939", + "name": "Locally Advanced Unresectable Acral Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C214943", + "name": "Locally Advanced Unresectable Conjunctival Melanoma", + "level": 6, + "leaf": true + }, + { + "code": "C214936", + "name": "Locally Advanced Unresectable Cutaneous Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C214937", + "name": "Locally Advanced Unresectable Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C214938", + "name": "Locally Advanced Unresectable Mucosal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C214950", + "name": "Locally Advanced Unresectable Non-Cutaneous Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C214949", + "name": "Locally Advanced Unresectable Ocular Melanoma", + "level": 5, + "leaf": false + }, + { + "code": "C190138", + "name": "Locally Advanced Unresectable Uveal Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C213952", + "name": "Locally Advanced Uveal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C204843", + "name": "Low-CSD Melanoma, Superficial Spreading Melanoma Subtype", + "level": 4, + "leaf": true + }, + { + "code": "C9152", + "name": "Low-CSD Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C45652", + "name": "Lung Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C213491", + "name": "Mediastinal Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C9090", + "name": "Medium/Large Size Posterior Uveal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C4240", + "name": "Melanoma Arising in Blue Nevus", + "level": 2, + "leaf": true + }, + { + "code": "C48613", + "name": "Melanoma Arising in Congenital Melanocytic Nevus", + "level": 2, + "leaf": false + }, + { + "code": "C4235", + "name": "Melanoma Arising in Giant Congenital Nevus", + "level": 3, + "leaf": true + }, + { + "code": "C204864", + "name": "Melanoma in Chronically Sun-Exposed Skin", + "level": 2, + "leaf": false + }, + { + "code": "C204840", + "name": "Melanoma in Intermittently Sun-Exposed Skin", + "level": 2, + "leaf": false + }, + { + "code": "C4232", + "name": "Melanoma in Junctional Nevus", + "level": 2, + "leaf": true + }, + { + "code": "C66753", + "name": "Melanoma in Precancerous Melanosis", + "level": 2, + "leaf": true + }, + { + "code": "C215044", + "name": "Melanoma In Situ", + "level": 1, + "leaf": false + }, + { + "code": "C154473", + "name": "Melanoma of Unknown Primary", + "level": 2, + "leaf": true + }, + { + "code": "C5317", + "name": "Meningeal Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C179427", + "name": "Metastatic Acral Lentiginous Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C212032", + "name": "Metastatic Acral Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C169085", + "name": "Metastatic Choroid Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C182127", + "name": "Metastatic Conjunctival Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C212038", + "name": "Metastatic Cutaneous Melanoma of the Extremity", + "level": 3, + "leaf": false + }, + { + "code": "C156072", + "name": "Metastatic Cutaneous Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C213510", + "name": "Metastatic Melanoma in the Bone", + "level": 2, + "leaf": false + }, + { + "code": "C179206", + "name": "Metastatic Melanoma in the Brain", + "level": 3, + "leaf": true + }, + { + "code": "C133504", + "name": "Metastatic Melanoma in the Central Nervous System", + "level": 2, + "leaf": false + }, + { + "code": "C215392", + "name": "Metastatic Melanoma in the Heart", + "level": 2, + "leaf": false + }, + { + "code": "C205131", + "name": "Metastatic Melanoma in the Lymph Nodes", + "level": 2, + "leaf": true + }, + { + "code": "C215389", + "name": "Metastatic Melanoma in the Myocardium", + "level": 3, + "leaf": true + }, + { + "code": "C205130", + "name": "Metastatic Melanoma in the Skin", + "level": 2, + "leaf": true + }, + { + "code": "C213511", + "name": "Metastatic Melanoma in the Temporal Bone", + "level": 3, + "leaf": true + }, + { + "code": "C205132", + "name": "Metastatic Melanoma in the Viscera", + "level": 2, + "leaf": true + }, + { + "code": "C8925", + "name": "Metastatic Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C169086", + "name": "Metastatic Mucosal Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C7092", + "name": "Metastatic Non-Cutaneous Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C213776", + "name": "Metastatic Non-Sun Exposed Skin Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C171295", + "name": "Metastatic Ocular Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C148514", + "name": "Metastatic Uveal Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C48612", + "name": "Minimal Deviation Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C66756", + "name": "Mixed Epithelioid and Spindle Cell Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C48622", + "name": "Mucosal Lentiginous Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C114828", + "name": "Mucosal Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C166405", + "name": "Mucosal Nodular Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C204889", + "name": "Nail Apparatus Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C178522", + "name": "Nasopharyngeal Mucosal Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C54662", + "name": "Nevoid Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C205125", + "name": "Nodular Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C8711", + "name": "Non-Cutaneous Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C213774", + "name": "Non-Sun Exposed Skin Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C7913", + "name": "Ocular Melanoma with Extraocular Extension", + "level": 3, + "leaf": true + }, + { + "code": "C8562", + "name": "Ocular Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C27919", + "name": "Old Burn Scar-Related Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C209348", + "name": "Oligometastatic Cutaneous Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C5915", + "name": "Oral Cavity Mucosal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C118828", + "name": "Orbital Melanoma", + "level": 1, + "leaf": true + }, + { + "code": "C178441", + "name": "Ovarian Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C213517", + "name": "Parotid Gland Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C137662", + "name": "Pathologic Stage 0 Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": true + }, + { + "code": "C137663", + "name": "Pathologic Stage I Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": false + }, + { + "code": "C137664", + "name": "Pathologic Stage IA Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137665", + "name": "Pathologic Stage IB Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137666", + "name": "Pathologic Stage II Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": false + }, + { + "code": "C137667", + "name": "Pathologic Stage IIA Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137668", + "name": "Pathologic Stage IIB Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137669", + "name": "Pathologic Stage IIC Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137670", + "name": "Pathologic Stage III Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": false + }, + { + "code": "C137671", + "name": "Pathologic Stage IIIA Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137672", + "name": "Pathologic Stage IIIB Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137673", + "name": "Pathologic Stage IIIC Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137675", + "name": "Pathologic Stage IIID Cutaneous Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C137677", + "name": "Pathologic Stage IV Cutaneous Melanoma AJCC v8", + "level": 4, + "leaf": true + }, + { + "code": "C178518", + "name": "Penile Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C162547", + "name": "Penile Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C178517", + "name": "Penile Mucosal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C178521", + "name": "Pharyngeal Mucosal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C161611", + "name": "Prostate Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C188079", + "name": "Rectal Epithelioid Cell Melanoma", + "level": 6, + "leaf": true + }, + { + "code": "C4640", + "name": "Rectal Melanoma", + "level": 5, + "leaf": false + }, + { + "code": "C175435", + "name": "Recurrent Acral Lentiginous Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C214951", + "name": "Recurrent Acral Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C214944", + "name": "Recurrent Conjunctival Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C155306", + "name": "Recurrent Cutaneous Melanoma of the Extremity", + "level": 3, + "leaf": false + }, + { + "code": "C9097", + "name": "Recurrent Cutaneous Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C8785", + "name": "Recurrent Lentigo Maligna Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C7087", + "name": "Recurrent Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C182020", + "name": "Recurrent Metastatic Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C170954", + "name": "Recurrent Mucosal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C7088", + "name": "Recurrent Non-Cutaneous Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C171294", + "name": "Recurrent Ocular Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C7914", + "name": "Recurrent Uveal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C150544", + "name": "Refractory Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C147983", + "name": "Refractory Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C182024", + "name": "Refractory Metastatic Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C180894", + "name": "Refractory Mucosal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C173328", + "name": "Refractory Non-Cutaneous Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C173329", + "name": "Refractory Ocular Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C173335", + "name": "Refractory Uveal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C7089", + "name": "Regressing Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C4228", + "name": "Regressing Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C7090", + "name": "Regressing Non-Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C215228", + "name": "Resectable Anorectal Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C190240", + "name": "Resectable Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C190239", + "name": "Resectable Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C215234", + "name": "Resectable Sinonasal Mucosal Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C8601", + "name": "Retinal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C7361", + "name": "Scrotal Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C54663", + "name": "Signet Ring Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C166399", + "name": "Sinonasal Mucosal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C9089", + "name": "Small Size Posterior Uveal Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C27920", + "name": "Solar Radiation-Related Cutaneous Melanoma", + "level": 2, + "leaf": true + }, + { + "code": "C5158", + "name": "Spinal Cord Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C4237", + "name": "Spindle Cell Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C8423", + "name": "Stage 0 Cutaneous Melanoma AJCC v6 and v7", + "level": 3, + "leaf": false + }, + { + "code": "C8781", + "name": "Stage I Acral Lentiginous Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C140660", + "name": "Stage I Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 4, + "leaf": true + }, + { + "code": "C7916", + "name": "Stage I Cutaneous Melanoma AJCC v6", + "level": 3, + "leaf": true + }, + { + "code": "C88414", + "name": "Stage I Cutaneous Melanoma AJCC v7", + "level": 3, + "leaf": false + }, + { + "code": "C8786", + "name": "Stage I Lentigo Maligna Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C8790", + "name": "Stage I Low-CSD Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C5577", + "name": "Stage I Uveal Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C86026", + "name": "Stage IA Cutaneous Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C86030", + "name": "Stage IB Cutaneous Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C8782", + "name": "Stage II Acral Lentiginous Melanoma AJCC v6 and v7", + "level": 5, + "leaf": true + }, + { + "code": "C140661", + "name": "Stage II Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 4, + "leaf": false + }, + { + "code": "C7917", + "name": "Stage II Cutaneous Melanoma AJCC v6 and v7", + "level": 3, + "leaf": false + }, + { + "code": "C8787", + "name": "Stage II Lentigo Maligna Melanoma AJCC v6 and v7", + "level": 5, + "leaf": true + }, + { + "code": "C8791", + "name": "Stage II Low-CSD Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C5578", + "name": "Stage II Uveal Melanoma AJCC v7", + "level": 4, + "leaf": false + }, + { + "code": "C140662", + "name": "Stage IIA Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C86033", + "name": "Stage IIA Cutaneous Melanoma AJCC v6 and v7", + "level": 4, + "leaf": true + }, + { + "code": "C88135", + "name": "Stage IIA Uveal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C140663", + "name": "Stage IIB Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C27742", + "name": "Stage IIB Cutaneous Melanoma AJCC v6 and v7", + "level": 4, + "leaf": true + }, + { + "code": "C88136", + "name": "Stage IIB Uveal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C86034", + "name": "Stage IIC Cutaneous Melanoma AJCC v6 and v7", + "level": 4, + "leaf": true + }, + { + "code": "C8783", + "name": "Stage III Acral Lentiginous Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C140664", + "name": "Stage III Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 4, + "leaf": false + }, + { + "code": "C7918", + "name": "Stage III Cutaneous Melanoma AJCC v6", + "level": 3, + "leaf": true + }, + { + "code": "C88415", + "name": "Stage III Cutaneous Melanoma AJCC v7", + "level": 3, + "leaf": false + }, + { + "code": "C87532", + "name": "Stage III Head and Neck Mucosal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C8788", + "name": "Stage III Lentigo Maligna Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C8792", + "name": "Stage III Low-CSD Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C5579", + "name": "Stage III Uveal Melanoma AJCC v7", + "level": 4, + "leaf": false + }, + { + "code": "C140665", + "name": "Stage IIIA Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C86049", + "name": "Stage IIIA Cutaneous Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C88137", + "name": "Stage IIIA Uveal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C140666", + "name": "Stage IIIB Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C86051", + "name": "Stage IIIB Cutaneous Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C88138", + "name": "Stage IIIB Uveal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C140667", + "name": "Stage IIIC Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 5, + "leaf": true + }, + { + "code": "C86053", + "name": "Stage IIIC Cutaneous Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C88139", + "name": "Stage IIIC Uveal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C8784", + "name": "Stage IV Acral Lentiginous Melanoma AJCC v6 and v7", + "level": 5, + "leaf": true + }, + { + "code": "C140668", + "name": "Stage IV Choroidal and Ciliary Body Melanoma AJCC v8", + "level": 4, + "leaf": true + }, + { + "code": "C9096", + "name": "Stage IV Cutaneous Melanoma AJCC v6 and v7", + "level": 3, + "leaf": false + }, + { + "code": "C8789", + "name": "Stage IV Lentigo Maligna Melanoma AJCC v6 and v7", + "level": 5, + "leaf": true + }, + { + "code": "C8793", + "name": "Stage IV Low-CSD Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C5580", + "name": "Stage IV Uveal Melanoma AJCC v7", + "level": 4, + "leaf": true + }, + { + "code": "C87533", + "name": "Stage IVA Head and Neck Mucosal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C87534", + "name": "Stage IVB Head and Neck Mucosal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C87535", + "name": "Stage IVC Head and Neck Mucosal Melanoma AJCC v7", + "level": 5, + "leaf": true + }, + { + "code": "C204887", + "name": "Subungual Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C213513", + "name": "Temporal Bone Mucosal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C4238", + "name": "Type A Spindle Cell Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C4239", + "name": "Type B Spindle Cell Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C165535", + "name": "Unresectable Acral Lentiginous Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C213771", + "name": "Unresectable Acral Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C215227", + "name": "Unresectable Anorectal Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C214942", + "name": "Unresectable Conjunctival Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C148245", + "name": "Unresectable Cutaneous Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C148517", + "name": "Unresectable Melanoma", + "level": 1, + "leaf": false + }, + { + "code": "C165536", + "name": "Unresectable Mucosal Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C214948", + "name": "Unresectable Non-Cutaneous Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C213775", + "name": "Unresectable Non-Sun Exposed Skin Melanoma", + "level": 3, + "leaf": true + }, + { + "code": "C214947", + "name": "Unresectable Ocular Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C215231", + "name": "Unresectable Sinonasal Mucosal Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C172247", + "name": "Unresectable Uveal Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C159665", + "name": "Urethral Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C178453", + "name": "Urinary System Mucosal Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C111020", + "name": "Uveal Class 1 Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C111022", + "name": "Uveal Class 1a Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C111023", + "name": "Uveal Class 1b Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C111021", + "name": "Uveal Class 2 Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C35780", + "name": "Uveal Epithelioid Cell Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C7989", + "name": "Uveal Intermediate Cell Type Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C140672", + "name": "Uveal Melanoma by AJCC v7 Stage", + "level": 3, + "leaf": false + }, + { + "code": "C111030", + "name": "Uveal Melanoma by Gene Expression Profile", + "level": 3, + "leaf": false + }, + { + "code": "C150130", + "name": "Uveal Melanoma Metastatic in the Liver", + "level": 5, + "leaf": true + }, + { + "code": "C7712", + "name": "Uveal Melanoma", + "level": 2, + "leaf": false + }, + { + "code": "C35781", + "name": "Uveal Mixed Epithelioid and Spindle Cell Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C7990", + "name": "Uveal Necrotic Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C7986", + "name": "Uveal Spindle Cell Melanoma", + "level": 3, + "leaf": false + }, + { + "code": "C7987", + "name": "Uveal Spindle Cell Type A Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C7988", + "name": "Uveal Spindle Cell Type B Melanoma", + "level": 4, + "leaf": false + }, + { + "code": "C27394", + "name": "Vaginal Melanoma", + "level": 5, + "leaf": true + }, + { + "code": "C204888", + "name": "Volar Melanoma", + "level": 4, + "leaf": true + }, + { + "code": "C40329", + "name": "Vulvar Melanoma", + "level": 5, + "leaf": true + } +] + diff --git a/curl-examples/samples/get-concepts-by-list-of-codes-minimum.txt b/curl-examples/samples/get-concepts-by-list-of-codes-minimum.txt index 628e6d75..2bcd95e4 100644 --- a/curl-examples/samples/get-concepts-by-list-of-codes-minimum.txt +++ b/curl-examples/samples/get-concepts-by-list-of-codes-minimum.txt @@ -1,21 +1,21 @@ -[ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3910", - "name": "Molecular Abnormality", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } -] - +[ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3910", + "name": "Molecular Abnormality", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } +] + diff --git a/curl-examples/samples/get-definition-type-by-code.txt b/curl-examples/samples/get-definition-type-by-code.txt index 5a442ec0..ab0daa3d 100644 --- a/curl-examples/samples/get-definition-type-by-code.txt +++ b/curl-examples/samples/get-definition-type-by-code.txt @@ -1,33 +1,33 @@ -{ - "code": "P325", - "name": "ALT_DEFINITION", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "[source] Definition", - "type": "Display_Name" - }, - { - "name": "ALT_DEFINITION", - "type": "FULL_SYN" - }, - { - "name": "ALT_DEFINITION", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the English language definition of a concept from a source other than NCI.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "P325", + "name": "ALT_DEFINITION", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "[source] Definition", + "type": "Display_Name" + }, + { + "name": "ALT_DEFINITION", + "type": "FULL_SYN" + }, + { + "name": "ALT_DEFINITION", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the English language definition of a concept from a source other than NCI.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-definition-types.txt b/curl-examples/samples/get-definition-types.txt index d5356043..d7d2a5f2 100644 --- a/curl-examples/samples/get-definition-types.txt +++ b/curl-examples/samples/get-definition-types.txt @@ -1,67 +1,67 @@ -[ - { - "code": "P325", - "name": "ALT_DEFINITION", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "[source] Definition", - "type": "Display_Name" - }, - { - "name": "ALT_DEFINITION", - "type": "FULL_SYN" - }, - { - "name": "ALT_DEFINITION", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the English language definition of a concept from a source other than NCI.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P97", - "name": "DEFINITION", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Definition", - "type": "Display_Name" - }, - { - "name": "DEFINITION", - "type": "FULL_SYN" - }, - { - "name": "DEFINITION", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the English language definitions of what NCI means by the concept. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "P325", + "name": "ALT_DEFINITION", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "[source] Definition", + "type": "Display_Name" + }, + { + "name": "ALT_DEFINITION", + "type": "FULL_SYN" + }, + { + "name": "ALT_DEFINITION", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the English language definition of a concept from a source other than NCI.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P97", + "name": "DEFINITION", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Definition", + "type": "Display_Name" + }, + { + "name": "DEFINITION", + "type": "FULL_SYN" + }, + { + "name": "DEFINITION", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the English language definitions of what NCI means by the concept. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-maps-by-mapset-code.txt b/curl-examples/samples/get-maps-by-mapset-code.txt index 8a236511..d0a1a9a5 100644 --- a/curl-examples/samples/get-maps-by-mapset-code.txt +++ b/curl-examples/samples/get-maps-by-mapset-code.txt @@ -1,87 +1,87 @@ -{ - "total": 305, - "parameters": { - "type": "contains", - "include": "minimal", - "fromRecord": 0, - "pageSize": 5 - }, - "maps": [ - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "DNA integration", - "sourceCode": "GO:0015074", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "DNA Integration", - "targetCode": "C18855", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000006" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "DNA modification", - "sourceCode": "GO:0006304", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "DNA Modification Process", - "targetCode": "C19449", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000008" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "DNA recombination", - "sourceCode": "GO:0006310", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "DNA Recombination Process", - "targetCode": "C17082", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000009" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "RNA binding", - "sourceCode": "GO:0003723", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "RNA Binding", - "targetCode": "C20737", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000022" - }, - { - "mapsetCode": "GO_to_NCIt_Mapping", - "source": "go", - "sourceName": "RNA polyadenylation", - "sourceCode": "GO:0043631", - "sourceTerminology": "GO", - "type": "mapsTo", - "rank": "1", - "target": "ncit", - "targetName": "RNA Polyadenylation", - "targetCode": "C18947", - "targetTerminology": "NCI_Thesaurus", - "targetTerminologyVersion": "23.02d", - "sortKey": "1000026" - } - ] -} - +{ + "total": 305, + "parameters": { + "type": "contains", + "include": "minimal", + "fromRecord": 0, + "pageSize": 5 + }, + "maps": [ + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "DNA integration", + "sourceCode": "GO:0015074", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "DNA Integration", + "targetCode": "C18855", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000006" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "DNA modification", + "sourceCode": "GO:0006304", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "DNA Modification Process", + "targetCode": "C19449", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000008" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "DNA recombination", + "sourceCode": "GO:0006310", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "DNA Recombination Process", + "targetCode": "C17082", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000009" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "RNA binding", + "sourceCode": "GO:0003723", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "RNA Binding", + "targetCode": "C20737", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000022" + }, + { + "mapsetCode": "GO_to_NCIt_Mapping", + "source": "go", + "sourceName": "RNA polyadenylation", + "sourceCode": "GO:0043631", + "sourceTerminology": "GO", + "type": "mapsTo", + "rank": "1", + "target": "ncit", + "targetName": "RNA Polyadenylation", + "targetCode": "C18947", + "targetTerminology": "NCI_Thesaurus", + "targetTerminologyVersion": "23.02d", + "sortKey": "1000026" + } + ] +} + diff --git a/curl-examples/samples/get-mapset-by-code.txt b/curl-examples/samples/get-mapset-by-code.txt index 04b9f7f4..523fe7ed 100644 --- a/curl-examples/samples/get-mapset-by-code.txt +++ b/curl-examples/samples/get-mapset-by-code.txt @@ -1,44 +1,44 @@ -{ - "code": "GO_to_NCIt_Mapping", - "name": "GO_to_NCIt_Mapping", - "version": "February2020", - "properties": [ - { - "type": "loader", - "value": "MappingLoadServiceImpl" - }, - { - "type": "welcomeText", - "value": "This is a manual EVS mapping of concepts with equivalent meaning in the source and target terminology versions shown\r\nbelow:\r\n

\r\n   Source: GO (Gene Ontology) February2020\r\n
\r\n   Target: NCIt (NCI Thesaurus) 20.02d\r\n

\r\nThe browser links each mapped concept to that concept's page in the current production version of its terminology.\r\n

\r\nThe first GO to NCIt mapping was manually curated by editors working at NCI in 2009. Automated term matching was\r\nperformed to create a preliminary map of the content in the Biological Process branch of NCIt and the GO\r\nbiological_process branch. The preliminary map was reviewed and validated by editors working at NCI to ensure that terms\r\nwith the same definitions were mapped. The map is updated when changes to the GO content invalidate current mapped\r\nentries.\r\n

\r\nThe Version shows the month and year that the mapping data were extracted. The Release Date shows the day that this\r\nmapping was approved for publication." - }, - { - "type": "sourceTerminology", - "value": "go" - }, - { - "type": "sourceTerminologyVersion", - "value": "February2020" - }, - { - "type": "targetTerminology", - "value": "ncit" - }, - { - "type": "targetTerminologyVersion", - "value": "20.02d" - }, - { - "type": "sourceLoaded", - "value": "true" - }, - { - "type": "targetLoaded", - "value": "true" - }, - { - "type": "downloadOnly", - "value": "false" - } - ] -} - +{ + "code": "GO_to_NCIt_Mapping", + "name": "GO_to_NCIt_Mapping", + "version": "February2020", + "properties": [ + { + "type": "loader", + "value": "MappingLoadServiceImpl" + }, + { + "type": "welcomeText", + "value": "This is a manual EVS mapping of concepts with equivalent meaning in the source and target terminology versions shown\r\nbelow:\r\n

\r\n   Source: GO (Gene Ontology) February2020\r\n
\r\n   Target: NCIt (NCI Thesaurus) 20.02d\r\n

\r\nThe browser links each mapped concept to that concept's page in the current production version of its terminology.\r\n

\r\nThe first GO to NCIt mapping was manually curated by editors working at NCI in 2009. Automated term matching was\r\nperformed to create a preliminary map of the content in the Biological Process branch of NCIt and the GO\r\nbiological_process branch. The preliminary map was reviewed and validated by editors working at NCI to ensure that terms\r\nwith the same definitions were mapped. The map is updated when changes to the GO content invalidate current mapped\r\nentries.\r\n

\r\nThe Version shows the month and year that the mapping data were extracted. The Release Date shows the day that this\r\nmapping was approved for publication." + }, + { + "type": "sourceTerminology", + "value": "go" + }, + { + "type": "sourceTerminologyVersion", + "value": "February2020" + }, + { + "type": "targetTerminology", + "value": "ncit" + }, + { + "type": "targetTerminologyVersion", + "value": "20.02d" + }, + { + "type": "sourceLoaded", + "value": "true" + }, + { + "type": "targetLoaded", + "value": "true" + }, + { + "type": "downloadOnly", + "value": "false" + } + ] +} + diff --git a/curl-examples/samples/get-mapsets.txt b/curl-examples/samples/get-mapsets.txt index 0a4407c3..f33ad81f 100644 --- a/curl-examples/samples/get-mapsets.txt +++ b/curl-examples/samples/get-mapsets.txt @@ -1,102 +1,102 @@ -[ - { - "code": "GO_to_NCIt_Mapping", - "name": "GO_to_NCIt_Mapping", - "version": "February2020" - }, - { - "code": "ICD10_to_MedDRA_Mapping", - "name": "ICD10_to_MedDRA_Mapping", - "version": "July2023" - }, - { - "code": "SNOMEDCT_US_2024_03_01_to_ICD10CM_2024_Mappings", - "name": "SNOMEDCT_US_2024_03_01 to ICD10CM_2024 Mappings", - "terminology": "snomedct_us", - "version": "2024_03_01" - }, - { - "code": "NCIT_TO_SWISSPROT", - "name": "NCIT_TO_SWISSPROT", - "version": "Feb2025" - }, - { - "code": "NCIt_Maps_To_GDC", - "name": "NCIt_Maps_To_GDC", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_Maps_To_ICD9CM", - "name": "NCIt_Maps_To_ICD9CM", - "version": "25.02d", - "active": true - }, - { - "code": "ICDO_TO_NCI_MORPHOLOGY", - "name": "ICDO_TO_NCI_MORPHOLOGY", - "version": "2017-12-21" - }, - { - "code": "NCIt_Maps_To_MedDRA", - "name": "NCIt_Maps_To_MedDRA", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_Maps_To_ICDO3", - "name": "NCIt_Maps_To_ICDO3", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_to_ChEBI_Mapping", - "name": "NCIt_to_ChEBI_Mapping", - "version": "Aug2024" - }, - { - "code": "MA_to_NCIt_Mapping", - "name": "MA_to_NCIt_Mapping", - "version": "November2011" - }, - { - "code": "SNOMEDCT_US_2024_03_01_to_ICD10_2016_Mappings", - "name": "SNOMEDCT_US_2024_03_01 to ICD10_2016 Mappings", - "terminology": "snomedct_us", - "version": "2024_03_01" - }, - { - "code": "PDQ_2016_07_31_to_NCI_2024_06D_Mappings", - "name": "PDQ_2016_07_31 to NCI_2024_06D Mappings", - "terminology": "pdq", - "version": "2016_07_31" - }, - { - "code": "NCIt_to_HGNC_Mapping", - "name": "NCIt_to_HGNC_Mapping", - "version": "Feb2025" - }, - { - "code": "NCIt_Maps_To_ICD10CM", - "name": "NCIt_Maps_To_ICD10CM", - "version": "25.02d", - "active": true - }, - { - "code": "NCIt_Maps_To_ICD10", - "name": "NCIt_Maps_To_ICD10", - "version": "25.02d", - "active": true - }, - { - "code": "ICDO_TO_NCI_TOPOGRAPHY", - "name": "ICDO_TO_NCI_TOPOGRAPHY", - "version": "2017-12-21" - }, - { - "code": "ICDO_TO_NCI_AXIS", - "name": "ICDO_TO_NCI_AXIS", - "version": "2017-12-21" - } -] - +[ + { + "code": "GO_to_NCIt_Mapping", + "name": "GO_to_NCIt_Mapping", + "version": "February2020" + }, + { + "code": "ICD10_to_MedDRA_Mapping", + "name": "ICD10_to_MedDRA_Mapping", + "version": "July2023" + }, + { + "code": "NCIt_Maps_To_GDC", + "name": "NCIt_Maps_To_GDC", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_Maps_To_ICD9CM", + "name": "NCIt_Maps_To_ICD9CM", + "version": "25.07d", + "active": true + }, + { + "code": "NCIT_TO_SWISSPROT", + "name": "NCIT_TO_SWISSPROT", + "version": "Jul2025" + }, + { + "code": "SNOMEDCT_US_2025_03_01_to_ICD10CM_2025_Mappings", + "name": "SNOMEDCT_US_2025_03_01 to ICD10CM_2025 Mappings", + "terminology": "snomedct_us", + "version": "2025_03_01" + }, + { + "code": "ICDO_TO_NCI_MORPHOLOGY", + "name": "ICDO_TO_NCI_MORPHOLOGY", + "version": "2017-12-21" + }, + { + "code": "NCIt_Maps_To_MedDRA", + "name": "NCIt_Maps_To_MedDRA", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_Maps_To_ICDO3", + "name": "NCIt_Maps_To_ICDO3", + "version": "25.07d", + "active": true + }, + { + "code": "SNOMEDCT_US_2025_03_01_to_ICD10_2016_Mappings", + "name": "SNOMEDCT_US_2025_03_01 to ICD10_2016 Mappings", + "terminology": "snomedct_us", + "version": "2025_03_01" + }, + { + "code": "NCIt_to_ChEBI_Mapping", + "name": "NCIt_to_ChEBI_Mapping", + "version": "Aug2024" + }, + { + "code": "MA_to_NCIt_Mapping", + "name": "MA_to_NCIt_Mapping", + "version": "November2011" + }, + { + "code": "NCIt_Maps_To_ICD10CM", + "name": "NCIt_Maps_To_ICD10CM", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_Maps_To_ICD10", + "name": "NCIt_Maps_To_ICD10", + "version": "25.07d", + "active": true + }, + { + "code": "NCIt_to_HGNC_Mapping", + "name": "NCIt_to_HGNC_Mapping", + "version": "Jul2025" + }, + { + "code": "ICDO_TO_NCI_TOPOGRAPHY", + "name": "ICDO_TO_NCI_TOPOGRAPHY", + "version": "2017-12-21" + }, + { + "code": "ICDO_TO_NCI_AXIS", + "name": "ICDO_TO_NCI_AXIS", + "version": "2017-12-21" + }, + { + "code": "PDQ_2016_07_31_to_NCI_2025_06E_Mappings", + "name": "PDQ_2016_07_31 to NCI_2025_06E Mappings", + "terminology": "pdq", + "version": "2016_07_31" + } +] + diff --git a/curl-examples/samples/get-paths-from-root.txt b/curl-examples/samples/get-paths-from-root.txt index 350a7639..4c329e64 100644 --- a/curl-examples/samples/get-paths-from-root.txt +++ b/curl-examples/samples/get-paths-from-root.txt @@ -1,127 +1,127 @@ -[ - [ - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C4741", - "name": "Neoplasm by Morphology", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C7058", - "name": "Melanocytic Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 5, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ], - [ - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7062", - "name": "Neoplasm by Special Category", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C9305", - "name": "Malignant Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 5, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -] - +[ + [ + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C4741", + "name": "Neoplasm by Morphology", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C7058", + "name": "Melanocytic Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 5, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ], + [ + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7062", + "name": "Neoplasm by Special Category", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C9305", + "name": "Malignant Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 5, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +] + diff --git a/curl-examples/samples/get-paths-to-ancestor.txt b/curl-examples/samples/get-paths-to-ancestor.txt index aa9ff38b..95c95c6c 100644 --- a/curl-examples/samples/get-paths-to-ancestor.txt +++ b/curl-examples/samples/get-paths-to-ancestor.txt @@ -1,107 +1,107 @@ -[ - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7058", - "name": "Melanocytic Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C4741", - "name": "Neoplasm by Morphology", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ], - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C9305", - "name": "Malignant Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7062", - "name": "Neoplasm by Special Category", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -] - +[ + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7058", + "name": "Melanocytic Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C4741", + "name": "Neoplasm by Morphology", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ], + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C9305", + "name": "Malignant Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7062", + "name": "Neoplasm by Special Category", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +] + diff --git a/curl-examples/samples/get-paths-to-root.txt b/curl-examples/samples/get-paths-to-root.txt index e25b204d..261950f9 100644 --- a/curl-examples/samples/get-paths-to-root.txt +++ b/curl-examples/samples/get-paths-to-root.txt @@ -1,127 +1,127 @@ -[ - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7058", - "name": "Melanocytic Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C4741", - "name": "Neoplasm by Morphology", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "level": 5, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ], - [ - { - "code": "C3224", - "name": "Melanoma", - "terminology": "ncit", - "version": "25.02d", - "level": 0, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C9305", - "name": "Malignant Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 1, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7062", - "name": "Neoplasm by Special Category", - "terminology": "ncit", - "version": "25.02d", - "level": 2, - "conceptStatus": "Header_Concept", - "leaf": false, - "active": true - }, - { - "code": "C3262", - "name": "Neoplasm", - "terminology": "ncit", - "version": "25.02d", - "level": 3, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C2991", - "name": "Disease or Disorder", - "terminology": "ncit", - "version": "25.02d", - "level": 4, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - }, - { - "code": "C7057", - "name": "Disease, Disorder or Finding", - "terminology": "ncit", - "version": "25.02d", - "level": 5, - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true - } - ] -] - +[ + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7058", + "name": "Melanocytic Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C4741", + "name": "Neoplasm by Morphology", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "level": 5, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ], + [ + { + "code": "C3224", + "name": "Melanoma", + "terminology": "ncit", + "version": "25.07d", + "level": 0, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C9305", + "name": "Malignant Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 1, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7062", + "name": "Neoplasm by Special Category", + "terminology": "ncit", + "version": "25.07d", + "level": 2, + "conceptStatus": "Header_Concept", + "leaf": false, + "active": true + }, + { + "code": "C3262", + "name": "Neoplasm", + "terminology": "ncit", + "version": "25.07d", + "level": 3, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C2991", + "name": "Disease or Disorder", + "terminology": "ncit", + "version": "25.07d", + "level": 4, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + }, + { + "code": "C7057", + "name": "Disease, Disorder or Finding", + "terminology": "ncit", + "version": "25.07d", + "level": 5, + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true + } + ] +] + diff --git a/curl-examples/samples/get-properties-with-code-list.txt b/curl-examples/samples/get-properties-with-code-list.txt index 22908b4e..71dbfa75 100644 --- a/curl-examples/samples/get-properties-with-code-list.txt +++ b/curl-examples/samples/get-properties-with-code-list.txt @@ -1,67 +1,67 @@ -[ - { - "code": "P201", - "name": "OLD_CHILD", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD CHILD", - "type": "Display_Name" - }, - { - "name": "OLD_CHILD", - "type": "FULL_SYN" - }, - { - "name": "OLD_CHILD", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to store the name of children concepts present at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P203", - "name": "OLD_KIND", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD KIND", - "type": "Display_Name" - }, - { - "name": "OLD_KIND", - "type": "FULL_SYN" - }, - { - "name": "OLD_KIND", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "Used to store the name of the concept's kind at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "P201", + "name": "OLD_CHILD", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD CHILD", + "type": "Display_Name" + }, + { + "name": "OLD_CHILD", + "type": "FULL_SYN" + }, + { + "name": "OLD_CHILD", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to store the name of children concepts present at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P203", + "name": "OLD_KIND", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD KIND", + "type": "Display_Name" + }, + { + "name": "OLD_KIND", + "type": "FULL_SYN" + }, + { + "name": "OLD_KIND", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "Used to store the name of the concept's kind at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-properties-with-label-list.txt b/curl-examples/samples/get-properties-with-label-list.txt index 22908b4e..71dbfa75 100644 --- a/curl-examples/samples/get-properties-with-label-list.txt +++ b/curl-examples/samples/get-properties-with-label-list.txt @@ -1,67 +1,67 @@ -[ - { - "code": "P201", - "name": "OLD_CHILD", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD CHILD", - "type": "Display_Name" - }, - { - "name": "OLD_CHILD", - "type": "FULL_SYN" - }, - { - "name": "OLD_CHILD", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to store the name of children concepts present at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P203", - "name": "OLD_KIND", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD KIND", - "type": "Display_Name" - }, - { - "name": "OLD_KIND", - "type": "FULL_SYN" - }, - { - "name": "OLD_KIND", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "Used to store the name of the concept's kind at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "P201", + "name": "OLD_CHILD", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD CHILD", + "type": "Display_Name" + }, + { + "name": "OLD_CHILD", + "type": "FULL_SYN" + }, + { + "name": "OLD_CHILD", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to store the name of children concepts present at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P203", + "name": "OLD_KIND", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD KIND", + "type": "Display_Name" + }, + { + "name": "OLD_KIND", + "type": "FULL_SYN" + }, + { + "name": "OLD_KIND", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "Used to store the name of the concept's kind at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-properties-with-summary.txt b/curl-examples/samples/get-properties-with-summary.txt index 0628b7d1..663c3d12 100644 --- a/curl-examples/samples/get-properties-with-summary.txt +++ b/curl-examples/samples/get-properties-with-summary.txt @@ -1,2379 +1,2379 @@ -[ - { - "code": "oboInOwl:hasDbXref", - "name": "xRef", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "xRef", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a reference to an identical or very similar object in another database.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "NHC0", - "name": "code", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "code", - "type": "FULL_SYN" - }, - { - "name": "code", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a concept unique identifier within the NCI Enterprise Vocabulary Service's NCI Thesaurus.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "readOnly", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a concept code" - } - ] - }, - { - "code": "P100", - "name": "OMIM_Number", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OMIM Number", - "type": "Display_Name" - }, - { - "name": "OMIM_Number", - "type": "FULL_SYN" - }, - { - "name": "OMIM_Number", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the accession number for a Protein or Gene within the OMIM database.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P101", - "name": "Homologous_Gene", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Homologous Gene", - "type": "Display_Name" - }, - { - "name": "Homologous_Gene", - "type": "FULL_SYN" - }, - { - "name": "Homologous_Gene", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing genes from other organisms that are similar in sequence and provide insight to the gene's function.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P102", - "name": "GenBank_Accession_Number", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "GenBank Accession Number", - "type": "Display_Name" - }, - { - "name": "GenBank_Accession_Number", - "type": "FULL_SYN" - }, - { - "name": "GenBank_Accession_Number", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the accession number for a Gene within the GenBank database.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P106", - "name": "Semantic_Type", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Semantic Type", - "type": "Display_Name" - }, - { - "name": "Semantic_Type", - "type": "FULL_SYN" - }, - { - "name": "Semantic_Type", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property that represents a description of the sort of thing or category to which a concept belongs in the context of the UMLS semantic network.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "In general, applying semantic types aids in allowing users (or computer programs) to draw conclusions about concepts by virtue of the categories to which they have been assigned. We use a set of semantic types developed for the UMLS Metathesaurus. There are currently 134 semantic types in the UMLS." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P107", - "name": "Display_Name", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Display Name", - "type": "Display_Name" - }, - { - "name": "Display Name", - "type": "FULL_SYN" - }, - { - "name": "Display_Name", - "type": "FULL_SYN" - }, - { - "name": "Display_Name", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing an alternative Preferred Name for use in some NCI systems.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a synonym" - } - ] - }, - { - "code": "P108", - "name": "Preferred_Name", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Preferred Name", - "type": "Display_Name" - }, - { - "name": "Preferred Name", - "type": "FULL_SYN" - }, - { - "name": "Preferred Term", - "type": "FULL_SYN" - }, - { - "name": "Preferred_Name", - "type": "FULL_SYN" - }, - { - "name": "Preferred_Name", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the word or phrase that NCI uses by preference to refer to the concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a preferred name" - } - ] - }, - { - "code": "P167", - "name": "Image_Link", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Image Link", - "type": "Display_Name" - }, - { - "name": "Image_Link", - "type": "FULL_SYN" - }, - { - "name": "Image_Link", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a link to an image in an external database.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P171", - "name": "PubMedID_Primary_Reference", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "PubMedID Primary Reference", - "type": "Display_Name" - }, - { - "name": "PubMedID_Primary_Reference", - "type": "FULL_SYN" - }, - { - "name": "PubMedID_Primary_Reference", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to provide a primary reference for descriptions of an NCI Thesaurus concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P175", - "name": "NSC Number", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "NSC Number", - "type": "Display_Name" - }, - { - "name": "NSC Number", - "type": "FULL_SYN" - }, - { - "name": "NSC_Code", - "type": "FULL_SYN" - }, - { - "name": "NSC_Number", - "type": "FULL_SYN" - }, - { - "name": "NSC_Number_Property", - "type": "FULL_SYN" - }, - { - "name": "NSC Number", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a numeric identifier for substances submitted to the National Cancer Institute (NCI) for testing and evaluation. It is named after the Cancer Chemotherapy National Service Center (CCNSC), created in 1955, which originally ran the testing program and assigned these numbers. The testing program and repository is now run by the NCI Developmental Therapeutics Program (DTP). Assignment of NSC numbers was never done in a way that would guarantee one and only one NSC number would be assigned to a particular substance.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P200", - "name": "OLD_PARENT", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD PARENT", - "type": "Display_Name" - }, - { - "name": "OLD_PARENT", - "type": "FULL_SYN" - }, - { - "name": "OLD_PARENT", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to store the name of parent concepts present at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P201", - "name": "OLD_CHILD", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD CHILD", - "type": "Display_Name" - }, - { - "name": "OLD_CHILD", - "type": "FULL_SYN" - }, - { - "name": "OLD_CHILD", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to store the name of children concepts present at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P203", - "name": "OLD_KIND", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD KIND", - "type": "Display_Name" - }, - { - "name": "OLD_KIND", - "type": "FULL_SYN" - }, - { - "name": "OLD_KIND", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "Used to store the name of the concept's kind at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P204", - "name": "OLD_ROLE", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "OLD ROLE", - "type": "Display_Name" - }, - { - "name": "OLD_ROLE", - "type": "FULL_SYN" - }, - { - "name": "OLD_ROLE", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to store the name and value of asserted roles present at the time a concept was retired.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P207", - "name": "UMLS_CUI", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "UMLS CUI", - "type": "Display_Name" - }, - { - "name": "UMLS_CUI", - "type": "FULL_SYN" - }, - { - "name": "UMLS_CUI", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the concept unique identifier (CUI) assigned by the National Library of Medicine (NLM). If a concept in any NCI-maintained knowledgebase exists in the NLM Unified Medical Language System (UMLS), NCI includes the NLM CUI among the information we provide about the concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P208", - "name": "NCI_META_CUI", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "NCI Metathesaurus CUI", - "type": "Display_Name" - }, - { - "name": "NCI_META_CUI", - "type": "FULL_SYN" - }, - { - "name": "NCI_META_CUI", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the concept unique identifier (CUI) for those concepts that appear in NCI Metathesaurus but not in the National Library of Medicine Unified Medical Language System (NLM UMLS).", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P210", - "name": "CAS_Registry", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "CAS Registry Number", - "type": "Display_Name" - }, - { - "name": "CAS_Registry", - "type": "FULL_SYN" - }, - { - "name": "CAS_Registry", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the Chemical Abstracts Service number for a Chemical or Drug.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P211", - "name": "GO_Annotation", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "GO Annotation", - "type": "Display_Name" - }, - { - "name": "GO_Annotation", - "type": "FULL_SYN" - }, - { - "name": "GO_Annotation", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property that contains information that can be used for cross-referencing to relevant entries in the Gene Ontology (GO) database including term name, code, and evidence code.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P215", - "name": "KEGG_ID", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "KEGG ID", - "type": "Display_Name" - }, - { - "name": "KEGG_ID", - "type": "FULL_SYN" - }, - { - "name": "KEGG_ID", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the KEGG ID code for a pathway. It can be used to link a KEGG pathway reference to the primary pathway information.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P216", - "name": "BioCarta_ID", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "BioCarta ID", - "type": "Display_Name" - }, - { - "name": "BioCarta_ID", - "type": "FULL_SYN" - }, - { - "name": "BioCarta_ID", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the BioCarta ID code for a pathway. It can be used to link a BioCarta pathway reference to the primary pathway information.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P302", - "name": "Accepted_Therapeutic_Use_For", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Accepted Therapeutic Use For", - "type": "Display_Name" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "FULL_SYN" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a disease or condition for which this drug is an accepted treatment. Used in the Drug, Food, Chemical or Biomedical Material branch.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P310", - "name": "Concept_Status", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Concept Status", - "type": "Display_Name" - }, - { - "name": "Concept_Status", - "type": "FULL_SYN" - }, - { - "name": "Concept_Status", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to indicate the standing of a concept in relation to currently accepted classifications and concepts. 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"type": "FULL_SYN" - }, - { - "name": "HGNC_ID", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing that a concept in the 'Gene' branch of the NCI thesaurus maps to a HUGO Gene Nomenclature Committee (HGNC) certified gene.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P371", - "name": "NICHD_Hierarchy_Term", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "NICHD_Hierarchy_Term", - "type": "FULL_SYN" - }, - { - "name": "NICHD_Hierarchy_Term", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a term chosen by NICHD to be used in the representation of the NICHD hierarchy.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Contributing_Source", - "value": "NICHD" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P372", - "name": "Publish_Value_Set", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Publish_Value_Set", - "type": "FULL_SYN" - }, - { - "name": "Publish_Value_Set", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing whether a value set is ready for publication in the browser.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P374", - "name": "Value_Set_Location", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Value_Set_Location", - "type": "FULL_SYN" - }, - { - "name": "Value_Set_Location", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the location of the subset report on the ftp site, along with its rules for display.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as Value_Set_Location" - } - ] - }, - { - "code": "P375", - "name": "Maps_To", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Maps_To", - "type": "FULL_SYN" - }, - { - "name": "Maps_To", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing that a term in another terminology has been mapped to a term in NCIt and describes the relationship between the mapped terms.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P376", - "name": "Term_Browser_Value_Set_Description", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Term_Browser_Value_Set_Description", - "type": "FULL_SYN" - }, - { - "name": "Term_Browser_Value_Set_Description", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used to house the text on the introductory page on the NCI Term Browser for the Value Set named by a concept when that text differs from the DEFINITION for that concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P398", - "name": "Value_Set_Pair", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Value_Set_Pair", - "type": "FULL_SYN" - }, - { - "name": "Value_Set_Pair", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property that indicates whether or not a value set is part of a paired set of codelists for publication processing purposes.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Contributing_Source", - "value": "CDISC" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P399", - "name": "NCI_Drug_Dictionary_ID", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "NCI_Drug_Dictionary_ID", - "type": "FULL_SYN" - }, - { - "name": "NCI_Drug_Dictionary_ID", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the numerical CDR ID, which is the NCI Drug Dictionary identifier for a chemical or pharmaceutical agent.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P400", - "name": "ClinVar_Variation_ID", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "ClinVar_Variation_ID", - "type": "FULL_SYN" - }, - { - "name": "ClinVar_Variation_ID", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the numerical Variation ID assigned to a molecular abnormality entry by ClinVar.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P90", - "name": "FULL_SYN", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Term & Source Data", - "type": "Display_Name" - }, - { - "name": "FULL_SYN", - "type": "FULL_SYN" - }, - { - "name": "Synonym with Source Data", - "type": "FULL_SYN" - }, - { - "name": "FULL_SYN", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a synonym" - } - ] - }, - { - "code": "P92", - "name": "Subsource", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Subsource", - "type": "Display_Name" - }, - { - "name": "Subsource", - "type": "FULL_SYN" - }, - { - "name": "Subsource", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property used by MMHCC to identify the source of various mouse disease concepts.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P93", - "name": "Swiss_Prot", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Swiss Prot", - "type": "Display_Name" - }, - { - "name": "Swiss_Prot", - "type": "FULL_SYN" - }, - { - "name": "Swiss_Prot", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the accession number for a protein within the Swiss-Prot database.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P96", - "name": "Gene_Encodes_Product", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Gene Encodes Product", - "type": "Display_Name" - }, - { - "name": "Gene_Encodes_Product", - "type": "FULL_SYN" - }, - { - "name": "Gene_Encodes_Product", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the protein or RNA product expressed by a gene.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "This represents the reciprocal relationship of the role Gene_Product_Encoded_by_Gene" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P97", - "name": "DEFINITION", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Definition", - "type": "Display_Name" - }, - { - "name": "DEFINITION", - "type": "FULL_SYN" - }, - { - "name": "DEFINITION", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the English language definitions of what NCI means by the concept. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a definition" - } - ] - }, - { - "code": "P98", - "name": "DesignNote", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "DesignNote", - "type": "Display_Name" - }, - { - "name": "DesignNote", - "type": "FULL_SYN" - }, - { - "name": "DesignNote", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing notations made by NCI vocabulary curators. They are intended to provide supplemental, unstructured information to the user or additional insight about the concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "oboInOwl:hasDbXref", + "name": "xRef", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "xRef", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a reference to an identical or very similar object in another database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "NHC0", + "name": "code", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "code", + "type": "FULL_SYN" + }, + { + "name": "code", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a concept unique identifier within the NCI Enterprise Vocabulary Service's NCI Thesaurus.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "readOnly", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a concept code" + } + ] + }, + { + "code": "P100", + "name": "OMIM_Number", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OMIM Number", + "type": "Display_Name" + }, + { + "name": "OMIM_Number", + "type": "FULL_SYN" + }, + { + "name": "OMIM_Number", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the accession number for a Protein or Gene within the OMIM database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P101", + "name": "Homologous_Gene", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Homologous Gene", + "type": "Display_Name" + }, + { + "name": "Homologous_Gene", + "type": "FULL_SYN" + }, + { + "name": "Homologous_Gene", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing genes from other organisms that are similar in sequence and provide insight to the gene's function.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P102", + "name": "GenBank_Accession_Number", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "GenBank Accession Number", + "type": "Display_Name" + }, + { + "name": "GenBank_Accession_Number", + "type": "FULL_SYN" + }, + { + "name": "GenBank_Accession_Number", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the accession number for a Gene within the GenBank database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P106", + "name": "Semantic_Type", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Semantic Type", + "type": "Display_Name" + }, + { + "name": "Semantic_Type", + "type": "FULL_SYN" + }, + { + "name": "Semantic_Type", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property that represents a description of the sort of thing or category to which a concept belongs in the context of the UMLS semantic network.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "In general, applying semantic types aids in allowing users (or computer programs) to draw conclusions about concepts by virtue of the categories to which they have been assigned. We use a set of semantic types developed for the UMLS Metathesaurus. There are currently 134 semantic types in the UMLS." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P107", + "name": "Display_Name", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Display Name", + "type": "Display_Name" + }, + { + "name": "Display Name", + "type": "FULL_SYN" + }, + { + "name": "Display_Name", + "type": "FULL_SYN" + }, + { + "name": "Display_Name", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing an alternative Preferred Name for use in some NCI systems.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a synonym" + } + ] + }, + { + "code": "P108", + "name": "Preferred_Name", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Preferred Name", + "type": "Display_Name" + }, + { + "name": "Preferred Name", + "type": "FULL_SYN" + }, + { + "name": "Preferred Term", + "type": "FULL_SYN" + }, + { + "name": "Preferred_Name", + "type": "FULL_SYN" + }, + { + "name": "Preferred_Name", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the word or phrase that NCI uses by preference to refer to the concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a preferred name" + } + ] + }, + { + "code": "P167", + "name": "Image_Link", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Image Link", + "type": "Display_Name" + }, + { + "name": "Image_Link", + "type": "FULL_SYN" + }, + { + "name": "Image_Link", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a link to an image in an external database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P171", + "name": "PubMedID_Primary_Reference", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "PubMedID Primary Reference", + "type": "Display_Name" + }, + { + "name": "PubMedID_Primary_Reference", + "type": "FULL_SYN" + }, + { + "name": "PubMedID_Primary_Reference", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to provide a primary reference for descriptions of an NCI Thesaurus concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P175", + "name": "NSC Number", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "NSC Number", + "type": "Display_Name" + }, + { + "name": "NSC Number", + "type": "FULL_SYN" + }, + { + "name": "NSC_Code", + "type": "FULL_SYN" + }, + { + "name": "NSC_Number", + "type": "FULL_SYN" + }, + { + "name": "NSC_Number_Property", + "type": "FULL_SYN" + }, + { + "name": "NSC Number", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a numeric identifier for substances submitted to the National Cancer Institute (NCI) for testing and evaluation. It is named after the Cancer Chemotherapy National Service Center (CCNSC), created in 1955, which originally ran the testing program and assigned these numbers. The testing program and repository is now run by the NCI Developmental Therapeutics Program (DTP). Assignment of NSC numbers was never done in a way that would guarantee one and only one NSC number would be assigned to a particular substance.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P200", + "name": "OLD_PARENT", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD PARENT", + "type": "Display_Name" + }, + { + "name": "OLD_PARENT", + "type": "FULL_SYN" + }, + { + "name": "OLD_PARENT", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to store the name of parent concepts present at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P201", + "name": "OLD_CHILD", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD CHILD", + "type": "Display_Name" + }, + { + "name": "OLD_CHILD", + "type": "FULL_SYN" + }, + { + "name": "OLD_CHILD", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to store the name of children concepts present at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P203", + "name": "OLD_KIND", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD KIND", + "type": "Display_Name" + }, + { + "name": "OLD_KIND", + "type": "FULL_SYN" + }, + { + "name": "OLD_KIND", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "Used to store the name of the concept's kind at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P204", + "name": "OLD_ROLE", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD ROLE", + "type": "Display_Name" + }, + { + "name": "OLD_ROLE", + "type": "FULL_SYN" + }, + { + "name": "OLD_ROLE", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to store the name and value of asserted roles present at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P207", + "name": "UMLS_CUI", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "UMLS CUI", + "type": "Display_Name" + }, + { + "name": "UMLS_CUI", + "type": "FULL_SYN" + }, + { + "name": "UMLS_CUI", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the concept unique identifier (CUI) assigned by the National Library of Medicine (NLM). If a concept in any NCI-maintained knowledgebase exists in the NLM Unified Medical Language System (UMLS), NCI includes the NLM CUI among the information we provide about the concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P208", + "name": "NCI_META_CUI", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "NCI Metathesaurus CUI", + "type": "Display_Name" + }, + { + "name": "NCI_META_CUI", + "type": "FULL_SYN" + }, + { + "name": "NCI_META_CUI", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the concept unique identifier (CUI) for those concepts that appear in NCI Metathesaurus but not in the National Library of Medicine Unified Medical Language System (NLM UMLS).", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P210", + "name": "CAS_Registry", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "CAS Registry Number", + "type": "Display_Name" + }, + { + "name": "CAS_Registry", + "type": "FULL_SYN" + }, + { + "name": "CAS_Registry", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the Chemical Abstracts Service number for a Chemical or Drug.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P211", + "name": "GO_Annotation", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "GO Annotation", + "type": "Display_Name" + }, + { + "name": "GO_Annotation", + "type": "FULL_SYN" + }, + { + "name": "GO_Annotation", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property that contains information that can be used for cross-referencing to relevant entries in the Gene Ontology (GO) database including term name, code, and evidence code.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P215", + "name": "KEGG_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "KEGG ID", + "type": "Display_Name" + }, + { + "name": "KEGG_ID", + "type": "FULL_SYN" + }, + { + "name": "KEGG_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the KEGG ID code for a pathway. It can be used to link a KEGG pathway reference to the primary pathway information.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P216", + "name": "BioCarta_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "BioCarta ID", + "type": "Display_Name" + }, + { + "name": "BioCarta_ID", + "type": "FULL_SYN" + }, + { + "name": "BioCarta_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the BioCarta ID code for a pathway. 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Object identifiers (OID) are assigned by a regulatory association. 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This is used where such entities, within or outside NCI, have indicated the need to be able to track their own concepts. A single concept can have multiple instances of this property if multiple entities have such a defined stake.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P325", + "name": "ALT_DEFINITION", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "[source] Definition", + "type": "Display_Name" + }, + { + "name": "ALT_DEFINITION", + "type": "FULL_SYN" + }, + { + "name": "ALT_DEFINITION", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the English language definition of a concept from a source other than NCI.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a definition" + } + ] + }, + { + "code": "P329", + "name": "PDQ_Open_Trial_Search_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "PDQ Open Trial Search ID", + "type": "Display_Name" + }, + { + "name": "PDQ_Open_Trial_Search_ID", + "type": "FULL_SYN" + }, + { + "name": "PDQ_Open_Trial_Search_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the identifier used by NCI's Cancer.gov Web site to retrieve PDQ Clinical Trials data for open trials involving specific clinical trials agents. 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[ + { + "definition": "A property representing a term that had been used in a coding system and then subsumed by the given NCIt concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P334", + "name": "ICD-O-3_Code", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "ICD-O-3 Code", + "type": "Display_Name" + }, + { + "name": "ICD-O-3_Code", + "type": "FULL_SYN" + }, + { + "name": "ICD-O-3_Code", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the matching ICD-O-3 code for the NCI Thesaurus concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P350", + "name": "Chemical_Formula", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Chemical Formula", + "type": "Display_Name" + }, + { + "name": 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"definition": "A property indicating that the Food and Nutrition Board of the National Academy of Science has established an average daily intake for this nutrient that is sufficient to meet the nutritional requirements of most individuals in the general U.S. population.", + "type": "ALT_DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P352", + "name": "Tolerable_Level", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Tolerable Level", + "type": "Display_Name" + }, + { + "name": "Tolerable Level", + "type": "FULL_SYN" + }, + { + "name": "Tolerable_Level", + "type": "FULL_SYN" + }, + { + "name": "Tolerable_Level", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property indicating that the Food and Nutrition Board of the National Academy of Science has established a highest level of daily intake for this food component that is likely to pose no risk of adverse health effects for almost all individuals in the general U.S. population.", + "type": "ALT_DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P353", + "name": "INFOODS", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "INFOODS Tag Name", + "type": "Display_Name" + }, + { + "name": "INFOODS", + "type": "FULL_SYN" + }, + { + "name": "INFOODS", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing uppercase abbreviations assigned by the International Network of Food Data Systems.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P354", + "name": "USDA_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "USDA ID", + "type": "Display_Name" + }, + { + "name": "USDA ID", + "type": "FULL_SYN" + }, + { + "name": "USDA_ID", + "type": "FULL_SYN" + }, + { + "name": "USDA_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a numeric ID assignment by United States Department of Agriculture.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P355", + "name": "Unit", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Unit Used", + "type": "Display_Name" + }, + { + "name": "Unit", + "type": "FULL_SYN" + }, + { + "name": "Unit", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the unit of measure in which a nutrient or food component is typically expressed, ex., gram (g), minigram (mg), microgram (mcg), joule, or kilojoule.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P356", + "name": "Essential_Amino_Acid", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is An Essential Amino Acid", + "type": "Display_Name" + }, + { + "name": "Essential_Amino_Acid", + "type": "FULL_SYN" + }, + { + "name": "Essential_Amino_Acid", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to indicate that an amino acid is essential and must be included in the diet.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P357", + "name": "Essential_Fatty_Acid", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is An Essential Fatty Acid", + "type": "Display_Name" + }, + { + "name": "Essential Fatty Acid", + "type": "FULL_SYN" + }, + { + "name": "Essential_Fatty_Acid", + "type": "FULL_SYN" + }, + { + "name": "Essential_Fatty_Acid", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to indicate a fatty acid that is not efficiently synthesized by humans and must be included in the diet.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P358", + "name": "Nutrient", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is A Nutrient", + "type": "Display_Name" + }, + { + "name": "Nutrient", + "type": "FULL_SYN" + }, + { + "name": "Nutrient", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property indicating that a food component must be taken into the body preformed and in sufficient quantity to meet the body's needs for growth, reproduction and/or maintenance of health.", + "type": "ALT_DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P359", + "name": "Micronutrient", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is A Micronutrient", + "type": "Display_Name" + }, + { + "name": "Micronutrient", + "type": "FULL_SYN" + }, + { + "name": "Micronutrient", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property indicating a class of food components required for proper health and that are typically consumed in microgram or milligram amounts.", + "type": "ALT_DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "Unit", + "value": "mg" + } + ] + }, + { + "code": "P360", + "name": "Macronutrient", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Macronutrient", + "type": "Display_Name" + }, + { + "name": "Macronutrient", + "type": "FULL_SYN" + }, + { + "name": "Macronutrient", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property indicating a class of food components that contribute energy to the diet and that are typically consumed in multi-gram amounts.", + "type": "ALT_DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CRCH" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "Unit", + "value": "g" + } + ] + }, + { + "code": "P361", + "name": "Extensible_List", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Extensible_List", + "type": "FULL_SYN" + }, + { + "name": "List Extensible", + "type": "FULL_SYN" + }, + { + "name": "Extensible_List", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the ability to extend the set of values in a particular list.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P362", + "name": "miRBase_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "miRBase_ID", + "type": "FULL_SYN" + }, + { + "name": "miRBase_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the accession number for an miRNA within the Sanger miRBase database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P363", + "name": "Neoplastic_Status", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Neoplastic Status", + "type": "Display_Name" + }, + { + "name": "Neoplastic_Status", + "type": "FULL_SYN" + }, + { + "name": "Neoplastic_Status", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the morphologic, clinical, and genetic profile of a neoplastic growth that defines it as benign, malignant, or of uncertain cancerous potential.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "FDA" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P364", + "name": "OLD_ASSOCIATION", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "OLD_ASSOCIATION", + "type": "FULL_SYN" + }, + { + "name": "OLD_ASSOCIATION", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to store the name and value of associations present at the time a concept was retired.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P366", + "name": "Legacy Concept Name", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Legacy Concept Name", + "type": "FULL_SYN" + }, + { + "name": "Legacy_Concept_Name", + "type": "FULL_SYN" + }, + { + "name": "Legacy Concept Name", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a retired unique concept identifier created and stored as Concept Name by legacy EVS software. Use of these values was long discouraged, but continued as late as 2009 when creation of new values ceased and Concept Name was retired. Legacy values are intended solely to help resolve and update earlier coding.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "readOnly", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P367", + "name": "PID_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "PID_ID", + "type": "FULL_SYN" + }, + { + "name": "PID_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the NCI/Nature Pathway Interaction Database (PID) code for a pathway. It can be used by the NCIt Browser to link a pathway concept to the source pathway information.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P368", + "name": "CHEBI_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "CHEBI_ID", + "type": "FULL_SYN" + }, + { + "name": "CHEBI_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing that a concept in the 'Drug, Food, Chemical or Biomedical Material' branch of the NCI thesaurus maps to a specific concept in the EBI Chemical Entities of Biological Interest (CHEBI) database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P369", + "name": "HGNC_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "HGNC_ID", + "type": "FULL_SYN" + }, + { + "name": "HUGO_ID", + "type": "FULL_SYN" + }, + { + "name": "HGNC_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing that a concept in the 'Gene' branch of the NCI thesaurus maps to a HUGO Gene Nomenclature Committee (HGNC) certified gene.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P371", + "name": "NICHD_Hierarchy_Term", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "NICHD_Hierarchy_Term", + "type": "FULL_SYN" + }, + { + "name": "NICHD_Hierarchy_Term", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a term chosen by NICHD to be used in the representation of the NICHD hierarchy.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "NICHD" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P372", + "name": "Publish_Value_Set", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Publish_Value_Set", + "type": "FULL_SYN" + }, + { + "name": "Publish_Value_Set", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing whether a value set is ready for publication in the browser.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P374", + "name": "Value_Set_Location", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Value_Set_Location", + "type": "FULL_SYN" + }, + { + "name": "Value_Set_Location", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the location of the subset report on the ftp site, along with its rules for display.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as Value_Set_Location" + } + ] + }, + { + "code": "P375", + "name": "Maps_To", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Maps_To", + "type": "FULL_SYN" + }, + { + "name": "Maps_To", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing that a term in another terminology has been mapped to a term in NCIt and describes the relationship between the mapped terms.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P376", + "name": "Term_Browser_Value_Set_Description", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Term_Browser_Value_Set_Description", + "type": "FULL_SYN" + }, + { + "name": "Term_Browser_Value_Set_Description", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used to house the text on the introductory page on the NCI Term Browser for the Value Set named by a concept when that text differs from the DEFINITION for that concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P398", + "name": "Value_Set_Pair", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Value_Set_Pair", + "type": "FULL_SYN" + }, + { + "name": "Value_Set_Pair", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property that indicates whether or not a value set is part of a paired set of codelists for publication processing purposes.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Contributing_Source", + "value": "CDISC" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P399", + "name": "NCI_Drug_Dictionary_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "NCI_Drug_Dictionary_ID", + "type": "FULL_SYN" + }, + { + "name": "NCI_Drug_Dictionary_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the numerical CDR ID, which is the NCI Drug Dictionary identifier for a chemical or pharmaceutical agent.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P400", + "name": "ClinVar_Variation_ID", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "ClinVar_Variation_ID", + "type": "FULL_SYN" + }, + { + "name": "ClinVar_Variation_ID", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the numerical Variation ID assigned to a molecular abnormality entry by ClinVar.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P90", + "name": "FULL_SYN", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Term & Source Data", + "type": "Display_Name" + }, + { + "name": "FULL_SYN", + "type": "FULL_SYN" + }, + { + "name": "Synonym with Source Data", + "type": "FULL_SYN" + }, + { + "name": "FULL_SYN", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a synonym" + } + ] + }, + { + "code": "P92", + "name": "Subsource", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Subsource", + "type": "Display_Name" + }, + { + "name": "Subsource", + "type": "FULL_SYN" + }, + { + "name": "Subsource", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property used by MMHCC to identify the source of various mouse disease concepts.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P93", + "name": "Swiss_Prot", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Swiss Prot", + "type": "Display_Name" + }, + { + "name": "Swiss_Prot", + "type": "FULL_SYN" + }, + { + "name": "Swiss_Prot", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the accession number for a protein within the Swiss-Prot database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P96", + "name": "Gene_Encodes_Product", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Gene Encodes Product", + "type": "Display_Name" + }, + { + "name": "Gene_Encodes_Product", + "type": "FULL_SYN" + }, + { + "name": "Gene_Encodes_Product", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the protein or RNA product expressed by a gene.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "This represents the reciprocal relationship of the role Gene_Product_Encoded_by_Gene" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P97", + "name": "DEFINITION", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Definition", + "type": "Display_Name" + }, + { + "name": "DEFINITION", + "type": "FULL_SYN" + }, + { + "name": "DEFINITION", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the English language definitions of what NCI means by the concept. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a definition" + } + ] + }, + { + "code": "P98", + "name": "DesignNote", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "DesignNote", + "type": "Display_Name" + }, + { + "name": "DesignNote", + "type": "FULL_SYN" + }, + { + "name": "DesignNote", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing notations made by NCI vocabulary curators. They are intended to provide supplemental, unstructured information to the user or additional insight about the concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-properties.txt b/curl-examples/samples/get-properties.txt index ab182fa0..d1bd388d 100644 --- a/curl-examples/samples/get-properties.txt +++ b/curl-examples/samples/get-properties.txt @@ -1,423 +1,423 @@ -[ - { - "code": "oboInOwl:hasDbXref", - "name": "xRef", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NHC0", - "name": "code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P100", - "name": "OMIM_Number", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P101", - "name": "Homologous_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P102", - "name": "GenBank_Accession_Number", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P106", - "name": "Semantic_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P107", - "name": "Display_Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P108", - "name": "Preferred_Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P167", - "name": "Image_Link", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P171", - "name": "PubMedID_Primary_Reference", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P175", - "name": "NSC Number", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P200", - "name": "OLD_PARENT", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P201", - "name": "OLD_CHILD", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P203", - "name": "OLD_KIND", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P204", - "name": "OLD_ROLE", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P207", - "name": "UMLS_CUI", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P208", - "name": "NCI_META_CUI", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P210", - "name": "CAS_Registry", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P211", - "name": "GO_Annotation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P215", - "name": "KEGG_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P216", - "name": "BioCarta_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P302", - "name": "Accepted_Therapeutic_Use_For", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P310", - "name": "Concept_Status", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P315", - "name": "SNP_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P316", - "name": "Relative_Enzyme_Activity", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P317", - "name": "FDA_Table", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P319", - "name": "FDA_UNII_Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P320", - "name": "OID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P321", - "name": "EntrezGene_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P322", - "name": "Contributing_Source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P325", - "name": "ALT_DEFINITION", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P329", - "name": "PDQ_Open_Trial_Search_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P330", - "name": "PDQ_Closed_Trial_Search_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P331", - "name": "NCBI_Taxon_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P332", - "name": "MGI_Accession_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P333", - "name": "Use_For", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P334", - "name": "ICD-O-3_Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P350", - "name": "Chemical_Formula", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P351", - "name": "US_Recommended_Intake", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P352", - "name": "Tolerable_Level", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P353", - "name": "INFOODS", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P354", - "name": "USDA_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P355", - "name": "Unit", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P356", - "name": "Essential_Amino_Acid", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P357", - "name": "Essential_Fatty_Acid", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P358", - "name": "Nutrient", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P359", - "name": "Micronutrient", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P360", - "name": "Macronutrient", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P361", - "name": "Extensible_List", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P362", - "name": "miRBase_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P363", - "name": "Neoplastic_Status", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P364", - "name": "OLD_ASSOCIATION", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P366", - "name": "Legacy Concept Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P367", - "name": "PID_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P368", - "name": "CHEBI_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P369", - "name": "HGNC_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P371", - "name": "NICHD_Hierarchy_Term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P372", - "name": "Publish_Value_Set", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P374", - "name": "Value_Set_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P375", - "name": "Maps_To", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P376", - "name": "Term_Browser_Value_Set_Description", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P398", - "name": "Value_Set_Pair", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P399", - "name": "NCI_Drug_Dictionary_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P400", - "name": "ClinVar_Variation_ID", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P90", - "name": "FULL_SYN", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P92", - "name": "Subsource", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P93", - "name": "Swiss_Prot", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P96", - "name": "Gene_Encodes_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P97", - "name": "DEFINITION", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P98", - "name": "DesignNote", - "terminology": "ncit", - "version": "25.02d" - } -] - +[ + { + "code": "oboInOwl:hasDbXref", + "name": "xRef", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NHC0", + "name": "code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P100", + "name": "OMIM_Number", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P101", + "name": "Homologous_Gene", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P102", + "name": "GenBank_Accession_Number", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P106", + "name": "Semantic_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P107", + "name": "Display_Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P108", + "name": "Preferred_Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P167", + "name": "Image_Link", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P171", + "name": "PubMedID_Primary_Reference", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P175", + "name": "NSC Number", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P200", + "name": "OLD_PARENT", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P201", + "name": "OLD_CHILD", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P203", + "name": "OLD_KIND", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P204", + "name": "OLD_ROLE", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P207", + "name": "UMLS_CUI", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P208", + "name": "NCI_META_CUI", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P210", + "name": "CAS_Registry", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P211", + "name": "GO_Annotation", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P215", + "name": "KEGG_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P216", + "name": "BioCarta_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P302", + "name": "Accepted_Therapeutic_Use_For", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P310", + "name": "Concept_Status", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P315", + "name": "SNP_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P316", + "name": "Relative_Enzyme_Activity", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P317", + "name": "FDA_Table", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P319", + "name": "FDA_UNII_Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P320", + "name": "OID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P321", + "name": "EntrezGene_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P322", + "name": "Contributing_Source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P325", + "name": "ALT_DEFINITION", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P329", + "name": "PDQ_Open_Trial_Search_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P330", + "name": "PDQ_Closed_Trial_Search_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P331", + "name": "NCBI_Taxon_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P332", + "name": "MGI_Accession_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P333", + "name": "Use_For", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P334", + "name": "ICD-O-3_Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P350", + "name": "Chemical_Formula", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P351", + "name": "US_Recommended_Intake", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P352", + "name": "Tolerable_Level", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P353", + "name": "INFOODS", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P354", + "name": "USDA_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P355", + "name": "Unit", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P356", + "name": "Essential_Amino_Acid", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P357", + "name": "Essential_Fatty_Acid", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P358", + "name": "Nutrient", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P359", + "name": "Micronutrient", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P360", + "name": "Macronutrient", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P361", + "name": "Extensible_List", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P362", + "name": "miRBase_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P363", + "name": "Neoplastic_Status", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P364", + "name": "OLD_ASSOCIATION", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P366", + "name": "Legacy Concept Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P367", + "name": "PID_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P368", + "name": "CHEBI_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P369", + "name": "HGNC_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P371", + "name": "NICHD_Hierarchy_Term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P372", + "name": "Publish_Value_Set", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P374", + "name": "Value_Set_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P375", + "name": "Maps_To", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P376", + "name": "Term_Browser_Value_Set_Description", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P398", + "name": "Value_Set_Pair", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P399", + "name": "NCI_Drug_Dictionary_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P400", + "name": "ClinVar_Variation_ID", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P90", + "name": "FULL_SYN", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P92", + "name": "Subsource", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P93", + "name": "Swiss_Prot", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P96", + "name": "Gene_Encodes_Product", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P97", + "name": "DEFINITION", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P98", + "name": "DesignNote", + "terminology": "ncit", + "version": "25.07d" + } +] + diff --git a/curl-examples/samples/get-property-with-code.txt b/curl-examples/samples/get-property-with-code.txt index 10c33b51..2ed2b935 100644 --- a/curl-examples/samples/get-property-with-code.txt +++ b/curl-examples/samples/get-property-with-code.txt @@ -1,33 +1,33 @@ -{ - "code": "P302", - "name": "Accepted_Therapeutic_Use_For", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Accepted Therapeutic Use For", - "type": "Display_Name" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "FULL_SYN" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a disease or condition for which this drug is an accepted treatment. Used in the Drug, Food, Chemical or Biomedical Material branch.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "P302", + "name": "Accepted_Therapeutic_Use_For", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Accepted Therapeutic Use For", + "type": "Display_Name" + }, + { + "name": "Accepted_Therapeutic_Use_For", + "type": "FULL_SYN" + }, + { + "name": "Accepted_Therapeutic_Use_For", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a disease or condition for which this drug is an accepted treatment. Used in the Drug, Food, Chemical or Biomedical Material branch.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-property-with-name.txt b/curl-examples/samples/get-property-with-name.txt index 10c33b51..2ed2b935 100644 --- a/curl-examples/samples/get-property-with-name.txt +++ b/curl-examples/samples/get-property-with-name.txt @@ -1,33 +1,33 @@ -{ - "code": "P302", - "name": "Accepted_Therapeutic_Use_For", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Accepted Therapeutic Use For", - "type": "Display_Name" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "FULL_SYN" - }, - { - "name": "Accepted_Therapeutic_Use_For", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a disease or condition for which this drug is an accepted treatment. Used in the Drug, Food, Chemical or Biomedical Material branch.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "P302", + "name": "Accepted_Therapeutic_Use_For", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Accepted Therapeutic Use For", + "type": "Display_Name" + }, + { + "name": "Accepted_Therapeutic_Use_For", + "type": "FULL_SYN" + }, + { + "name": "Accepted_Therapeutic_Use_For", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a disease or condition for which this drug is an accepted treatment. Used in the Drug, Food, Chemical or Biomedical Material branch.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-qualifier-values-with-code.txt b/curl-examples/samples/get-qualifier-values-with-code.txt index a85414eb..781dc699 100644 --- a/curl-examples/samples/get-qualifier-values-with-code.txt +++ b/curl-examples/samples/get-qualifier-values-with-code.txt @@ -1,4 +1,4 @@ -[ - "CGAP" -] - +[ + "CGAP" +] + diff --git a/curl-examples/samples/get-qualifier-values-with-label.txt b/curl-examples/samples/get-qualifier-values-with-label.txt index a85414eb..781dc699 100644 --- a/curl-examples/samples/get-qualifier-values-with-label.txt +++ b/curl-examples/samples/get-qualifier-values-with-label.txt @@ -1,4 +1,4 @@ -[ - "CGAP" -] - +[ + "CGAP" +] + diff --git a/curl-examples/samples/get-qualifier-with-code.txt b/curl-examples/samples/get-qualifier-with-code.txt index 6f5dd5e3..8f36c7d3 100644 --- a/curl-examples/samples/get-qualifier-with-code.txt +++ b/curl-examples/samples/get-qualifier-with-code.txt @@ -1,25 +1,25 @@ -{ - "code": "P387", - "name": "go-id", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "go-id", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - } - ] -} - +{ + "code": "P387", + "name": "go-id", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "go-id", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + } + ] +} + diff --git a/curl-examples/samples/get-qualifier-with-label.txt b/curl-examples/samples/get-qualifier-with-label.txt index 6f5dd5e3..8f36c7d3 100644 --- a/curl-examples/samples/get-qualifier-with-label.txt +++ b/curl-examples/samples/get-qualifier-with-label.txt @@ -1,25 +1,25 @@ -{ - "code": "P387", - "name": "go-id", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "go-id", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - } - ] -} - +{ + "code": "P387", + "name": "go-id", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "go-id", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + } + ] +} + diff --git a/curl-examples/samples/get-qualifiers-with-code-list.txt b/curl-examples/samples/get-qualifiers-with-code-list.txt index 11e0511c..7481158a 100644 --- a/curl-examples/samples/get-qualifiers-with-code-list.txt +++ b/curl-examples/samples/get-qualifiers-with-code-list.txt @@ -1,55 +1,55 @@ -[ - { - "code": "P381", - "name": "attribution", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "attribution", - "type": "FULL_SYN" - }, - { - "name": "attribution", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property indicating that some of the information in a DEFINITION or ALT_DEFINITION was derived from a source other than the def-source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P387", - "name": "go-id", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "go-id", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - } - ] - } -] - +[ + { + "code": "P381", + "name": "attribution", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "attribution", + "type": "FULL_SYN" + }, + { + "name": "attribution", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property indicating that some of the information in a DEFINITION or ALT_DEFINITION was derived from a source other than the def-source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P387", + "name": "go-id", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "go-id", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + } + ] + } +] + diff --git a/curl-examples/samples/get-qualifiers-with-label-list.txt b/curl-examples/samples/get-qualifiers-with-label-list.txt index 5e2f44d6..7dd43875 100644 --- a/curl-examples/samples/get-qualifiers-with-label-list.txt +++ b/curl-examples/samples/get-qualifiers-with-label-list.txt @@ -1,2 +1,2 @@ -[] - +[] + diff --git a/curl-examples/samples/get-qualifiers-with-summary.txt b/curl-examples/samples/get-qualifiers-with-summary.txt index c05f7edf..44b6c8b6 100644 --- a/curl-examples/samples/get-qualifiers-with-summary.txt +++ b/curl-examples/samples/get-qualifiers-with-summary.txt @@ -1,523 +1,523 @@ -[ - { - "code": "P383", - "name": "term-group", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "term-group", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a two or three character abbreviation that indicates the nature of each FULL_SYN term associated with a concept. (e.g., PT=Preferred Term; SY=Synonym)", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a synonym term type" - } - ] - }, - { - "code": "P384", - "name": "term-source", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "term-source", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the organization that is the supplier or owner of each FULL_SYN term.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Definition Source", - "value": "NCI" - }, - { - "type": "required", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a synonym source" - } - ] - }, - { - "code": "P378", - "name": "Definition Source", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Definition Source", - "type": "FULL_SYN" - }, - { - "name": "Definition Source", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the organization that is the supplier or owner of each DEFINITION or ALT_DEFINITION associated with a concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a definition source" - } - ] - }, - { - "code": "P381", - "name": "attribution", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "attribution", - "type": "FULL_SYN" - }, - { - "name": "attribution", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property indicating that some of the information in a DEFINITION or ALT_DEFINITION was derived from a source other than the def-source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P385", - "name": "Source Code", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Source Code", - "type": "FULL_SYN" - }, - { - "name": "source-code", - "type": "FULL_SYN" - }, - { - "name": "Source Code", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing an identifier associated with a FULL_SYN term that is supplied by the term-source.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a synonym code" - } - ] - }, - { - "code": "P386", - "name": "Subsource Name", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Subsource Name", - "type": "FULL_SYN" - }, - { - "name": "subsource-name", - "type": "FULL_SYN" - }, - { - "name": "Subsource Name", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property indicating that a subgroup within the term-source is the supplier or owner of a FULL_SYN term.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a synonym subsource" - } - ] - }, - { - "code": "P393", - "name": "Relationship_to_Target", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Relationship_to_Target", - "type": "FULL_SYN" - }, - { - "name": "Relationship_to_Target", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the relationship of the NCI Thesaurus (NCIt) concept to the term from the outside source. There are four possibilities: 1) Has Synonym: the two terms are synonymous; 2) Broader Than: the NCIt concept is broader than the mapped (target) term; 3) Narrower Than: the NCIt concept is narrower than the mapped (target) term; 4) Related To: the NCIt concept is somehow related to the mapped (target) term.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a relationship to target" - } - ] - }, - { - "code": "P394", - "name": "Target_Term_Type", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Target_Term_Type", - "type": "FULL_SYN" - }, - { - "name": "Target_Term_Type", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the term type designation in the mapped (target) database.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a map target term type" - } - ] - }, - { - "code": "P395", - "name": "Target_Code", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Target_Code", - "type": "FULL_SYN" - }, - { - "name": "Target_Code", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the code assigned to the target term in the mapped (target) database. Some databases may not have codes.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Definition Source", - "value": "NCI" - }, - { - "type": "required", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a map target" - } - ] - }, - { - "code": "P396", - "name": "Target_Terminology", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Target_Terminology", - "type": "FULL_SYN" - }, - { - "name": "Target_Terminology", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the name of the terminology to which the NCI Thesaurus term is being mapped.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a map target terminology" - } - ] - }, - { - "code": "P397", - "name": "Target_Terminology_Version", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Target_Terminology_Version", - "type": "FULL_SYN" - }, - { - "name": "Target_Terminology_Version", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the version of the terminology to which the NCI Thesaurus term is being mapped.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - }, - { - "type": "remodeled", - "value": "true" - }, - { - "type": "remodeledDescription", - "value": "Remodeled as a map target terminology version" - } - ] - }, - { - "code": "P387", - "name": "go-id", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "go-id", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - } - ] - }, - { - "code": "P389", - "name": "go-evi", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "go-evi", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a three letter code that indicates the type of supporting evidence for each GO_Annotation associated with a concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - } - ] - }, - { - "code": "P390", - "name": "go-source", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "go-source", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the organization that is the supplier or owner of each GO_Annotation associated with a concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - } - ] - }, - { - "code": "P391", - "name": "source-date", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "source-date", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the date each GO_Annotation was added to a concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "required", - "value": "true" - } - ] - } -] - +[ + { + "code": "P383", + "name": "term-group", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "term-group", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a two or three character abbreviation that indicates the nature of each FULL_SYN term associated with a concept. (e.g., PT=Preferred Term; SY=Synonym)", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a synonym term type" + } + ] + }, + { + "code": "P384", + "name": "term-source", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "term-source", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the organization that is the supplier or owner of each FULL_SYN term.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Definition Source", + "value": "NCI" + }, + { + "type": "required", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a synonym source" + } + ] + }, + { + "code": "P385", + "name": "Source Code", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Source Code", + "type": "FULL_SYN" + }, + { + "name": "source-code", + "type": "FULL_SYN" + }, + { + "name": "Source Code", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing an identifier associated with a FULL_SYN term that is supplied by the term-source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a synonym code" + } + ] + }, + { + "code": "P386", + "name": "Subsource Name", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Subsource Name", + "type": "FULL_SYN" + }, + { + "name": "subsource-name", + "type": "FULL_SYN" + }, + { + "name": "Subsource Name", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property indicating that a subgroup within the term-source is the supplier or owner of a FULL_SYN term.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a synonym subsource" + } + ] + }, + { + "code": "P378", + "name": "Definition Source", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Definition Source", + "type": "FULL_SYN" + }, + { + "name": "Definition Source", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the organization that is the supplier or owner of each DEFINITION or ALT_DEFINITION associated with a concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a definition source" + } + ] + }, + { + "code": "P381", + "name": "attribution", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "attribution", + "type": "FULL_SYN" + }, + { + "name": "attribution", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property indicating that some of the information in a DEFINITION or ALT_DEFINITION was derived from a source other than the def-source.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P387", + "name": "go-id", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "go-id", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a unique zero-padded seven digit identifier supplied by the Gene Ontology (GO) that has no inherent meaning or relation to the position of the term in GO and is prefixed by \"GO:\".", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + } + ] + }, + { + "code": "P389", + "name": "go-evi", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "go-evi", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a three letter code that indicates the type of supporting evidence for each GO_Annotation associated with a concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + } + ] + }, + { + "code": "P390", + "name": "go-source", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "go-source", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the organization that is the supplier or owner of each GO_Annotation associated with a concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + } + ] + }, + { + "code": "P391", + "name": "source-date", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "source-date", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the date each GO_Annotation was added to a concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + } + ] + }, + { + "code": "P393", + "name": "Relationship_to_Target", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Relationship_to_Target", + "type": "FULL_SYN" + }, + { + "name": "Relationship_to_Target", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the relationship of the NCI Thesaurus (NCIt) concept to the term from the outside source. There are four possibilities: 1) Has Synonym: the two terms are synonymous; 2) Broader Than: the NCIt concept is broader than the mapped (target) term; 3) Narrower Than: the NCIt concept is narrower than the mapped (target) term; 4) Related To: the NCIt concept is somehow related to the mapped (target) term.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a relationship to target" + } + ] + }, + { + "code": "P394", + "name": "Target_Term_Type", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Target_Term_Type", + "type": "FULL_SYN" + }, + { + "name": "Target_Term_Type", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the term type designation in the mapped (target) database.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a map target term type" + } + ] + }, + { + "code": "P395", + "name": "Target_Code", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Target_Code", + "type": "FULL_SYN" + }, + { + "name": "Target_Code", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the code assigned to the target term in the mapped (target) database. Some databases may not have codes.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Definition Source", + "value": "NCI" + }, + { + "type": "required", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a map target" + } + ] + }, + { + "code": "P396", + "name": "Target_Terminology", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Target_Terminology", + "type": "FULL_SYN" + }, + { + "name": "Target_Terminology", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the name of the terminology to which the NCI Thesaurus term is being mapped.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "required", + "value": "true" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a map target terminology" + } + ] + }, + { + "code": "P397", + "name": "Target_Terminology_Version", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Target_Terminology_Version", + "type": "FULL_SYN" + }, + { + "name": "Target_Terminology_Version", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the version of the terminology to which the NCI Thesaurus term is being mapped.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + }, + { + "type": "remodeled", + "value": "true" + }, + { + "type": "remodeledDescription", + "value": "Remodeled as a map target terminology version" + } + ] + } +] + diff --git a/curl-examples/samples/get-qualifiers.txt b/curl-examples/samples/get-qualifiers.txt index d5632f8d..fb0a08eb 100644 --- a/curl-examples/samples/get-qualifiers.txt +++ b/curl-examples/samples/get-qualifiers.txt @@ -1,93 +1,93 @@ -[ - { - "code": "P383", - "name": "term-group", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P384", - "name": "term-source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P378", - "name": "Definition Source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P381", - "name": "attribution", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P385", - "name": "Source Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P386", - "name": "Subsource Name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P393", - "name": "Relationship_to_Target", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P394", - "name": "Target_Term_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P395", - "name": "Target_Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P396", - "name": "Target_Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P397", - "name": "Target_Terminology_Version", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P387", - "name": "go-id", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P389", - "name": "go-evi", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P390", - "name": "go-source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "P391", - "name": "source-date", - "terminology": "ncit", - "version": "25.02d" - } -] - +[ + { + "code": "P383", + "name": "term-group", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P384", + "name": "term-source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P385", + "name": "Source Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P386", + "name": "Subsource Name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P378", + "name": "Definition Source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P381", + "name": "attribution", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P387", + "name": "go-id", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P389", + "name": "go-evi", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P390", + "name": "go-source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P391", + "name": "source-date", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P393", + "name": "Relationship_to_Target", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P394", + "name": "Target_Term_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P395", + "name": "Target_Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P396", + "name": "Target_Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "P397", + "name": "Target_Terminology_Version", + "terminology": "ncit", + "version": "25.07d" + } +] + diff --git a/curl-examples/samples/get-replacements-for-concept-code-list.txt b/curl-examples/samples/get-replacements-for-concept-code-list.txt index 48bb2745..26766195 100644 --- a/curl-examples/samples/get-replacements-for-concept-code-list.txt +++ b/curl-examples/samples/get-replacements-for-concept-code-list.txt @@ -1,19 +1,13 @@ -[ - { - "code": "C12658", - "name": "Prokaryotic Cell", - "action": "retire", - "date": "2003-08-22", - "replacementCode": "C19157", - "replacementName": "Specimen" - }, - { - "code": "C13320", - "name": "Nose, Nasal Passages", - "action": "merge", - "date": "2003-08-22", - "replacementCode": "C12756", - "replacementName": "Nose" - } -] - +[ + { + "code": "C12658", + "name": "Prokaryotic Cell", + "action": "active" + }, + { + "code": "C13320", + "name": "Nose, Nasal Passages", + "action": "active" + } +] + diff --git a/curl-examples/samples/get-replacements-for-concept-code.txt b/curl-examples/samples/get-replacements-for-concept-code.txt index df163a37..25fea6bb 100644 --- a/curl-examples/samples/get-replacements-for-concept-code.txt +++ b/curl-examples/samples/get-replacements-for-concept-code.txt @@ -1,11 +1,8 @@ -[ - { - "code": "C12658", - "name": "Prokaryotic Cell", - "action": "retire", - "date": "2003-08-22", - "replacementCode": "C19157", - "replacementName": "Specimen" - } -] - +[ + { + "code": "C12658", + "name": "Prokaryotic Cell", + "action": "active" + } +] + diff --git a/curl-examples/samples/get-role-with-code.txt b/curl-examples/samples/get-role-with-code.txt index 901b48e7..61feaa3e 100644 --- a/curl-examples/samples/get-role-with-code.txt +++ b/curl-examples/samples/get-role-with-code.txt @@ -1,33 +1,33 @@ -{ - "code": "R123", - "name": "Chemotherapy_Regimen_Has_Component", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Component", - "type": "Display_Name" - }, - { - "name": "Chemotherapy_Regimen_Has_Component", - "type": "FULL_SYN" - }, - { - "name": "Chemotherapy_Regimen_Has_Component", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the component agents which are used in a particular chemotherapy regimen or agent combination. The domain and the range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Drug, Food, Chemical or Biomedical Material', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "R123", + "name": "Chemotherapy_Regimen_Has_Component", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Component", + "type": "Display_Name" + }, + { + "name": "Chemotherapy_Regimen_Has_Component", + "type": "FULL_SYN" + }, + { + "name": "Chemotherapy_Regimen_Has_Component", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the component agents which are used in a particular chemotherapy regimen or agent combination. The domain and the range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Drug, Food, Chemical or Biomedical Material', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-role-with-label.txt b/curl-examples/samples/get-role-with-label.txt index 901b48e7..61feaa3e 100644 --- a/curl-examples/samples/get-role-with-label.txt +++ b/curl-examples/samples/get-role-with-label.txt @@ -1,33 +1,33 @@ -{ - "code": "R123", - "name": "Chemotherapy_Regimen_Has_Component", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Component", - "type": "Display_Name" - }, - { - "name": "Chemotherapy_Regimen_Has_Component", - "type": "FULL_SYN" - }, - { - "name": "Chemotherapy_Regimen_Has_Component", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the component agents which are used in a particular chemotherapy regimen or agent combination. The domain and the range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Drug, Food, Chemical or Biomedical Material', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "R123", + "name": "Chemotherapy_Regimen_Has_Component", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Component", + "type": "Display_Name" + }, + { + "name": "Chemotherapy_Regimen_Has_Component", + "type": "FULL_SYN" + }, + { + "name": "Chemotherapy_Regimen_Has_Component", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the component agents which are used in a particular chemotherapy regimen or agent combination. The domain and the range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Drug, Food, Chemical or Biomedical Material', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-roles-with-code-list.txt b/curl-examples/samples/get-roles-with-code-list.txt index a6a2a84c..38080e48 100644 --- a/curl-examples/samples/get-roles-with-code-list.txt +++ b/curl-examples/samples/get-roles-with-code-list.txt @@ -1,99 +1,99 @@ -[ - { - "code": "R115", - "name": "Disease_May_Have_Finding", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Finding", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Finding", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Finding", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a clinical observation, sign or symptom will only be observed in some cases of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R114", - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Cytogenetic Abnormality", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a particular cytogenetic abnormality will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R113", - "name": "Disease_May_Have_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Abnormal Cell", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Abnormal_Cell", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Abnormal_Cell", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that particular neoplastic cell types will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "R113", + "name": "Disease_May_Have_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Abnormal Cell", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Abnormal_Cell", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Abnormal_Cell", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that particular neoplastic cell types will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R114", + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Cytogenetic Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a particular cytogenetic abnormality will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R115", + "name": "Disease_May_Have_Finding", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Finding", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Finding", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Finding", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a clinical observation, sign or symptom will only be observed in some cases of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-roles-with-label-list.txt b/curl-examples/samples/get-roles-with-label-list.txt index a6a2a84c..38080e48 100644 --- a/curl-examples/samples/get-roles-with-label-list.txt +++ b/curl-examples/samples/get-roles-with-label-list.txt @@ -1,99 +1,99 @@ -[ - { - "code": "R115", - "name": "Disease_May_Have_Finding", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Finding", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Finding", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Finding", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a clinical observation, sign or symptom will only be observed in some cases of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R114", - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Cytogenetic Abnormality", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a particular cytogenetic abnormality will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R113", - "name": "Disease_May_Have_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Abnormal Cell", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Abnormal_Cell", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Abnormal_Cell", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that particular neoplastic cell types will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "R113", + "name": "Disease_May_Have_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Abnormal Cell", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Abnormal_Cell", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Abnormal_Cell", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that particular neoplastic cell types will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R114", + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Cytogenetic Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a particular cytogenetic abnormality will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R115", + "name": "Disease_May_Have_Finding", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Finding", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Finding", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Finding", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a clinical observation, sign or symptom will only be observed in some cases of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-roles-with-summary.txt b/curl-examples/samples/get-roles-with-summary.txt index f76bacbf..5dce21bc 100644 --- a/curl-examples/samples/get-roles-with-summary.txt +++ b/curl-examples/samples/get-roles-with-summary.txt @@ -1,3067 +1,3067 @@ -[ - { - "code": "R123", - "name": "Chemotherapy_Regimen_Has_Component", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Component", - "type": "Display_Name" - }, - { - "name": "Chemotherapy_Regimen_Has_Component", - "type": "FULL_SYN" - }, - { - "name": "Chemotherapy_Regimen_Has_Component", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the component agents which are used in a particular chemotherapy regimen or agent combination. The domain and the range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Drug, Food, Chemical or Biomedical Material', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R163", - "name": "Procedure_Has_Target_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Target Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_Has_Target_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_Has_Target_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a procedure and its target anatomy, specifically that a particular procedure always has an association with the target anatomy. This role should be used when a more specific role cannot be asserted, including procedures targeting blood and other fluids. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R100", - "name": "Disease_Has_Associated_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Associated Anatomic Site", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Associated_Anatomic_Site", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Associated_Anatomic_Site", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to the general site, structure or system where the specific pathological process is located. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "The role, Disease_Has_Associated_Anatomic_Site, is more general than the role, Disease_Has_Primary_Anatomic_Site. Furthermore, when viewed with the role, Disease_Has_Metastatic_Anatomic_Site, there emerges a role hierarchy, where one role specializes the meaning of another, more general role. Roles relating disease to anatomy start with a general assertion of association, often at very high level (e.g. Skin Disorder and Skin), and then add more specific primary/metastatic associations where appropriate for more specific concepts." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R126", - "name": "Disease_Has_Associated_Disease", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Associated Disease", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Associated_Disease", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Associated_Disease", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to another disease or disorder, but without specification or limitation of the relationship (causality or timing for example). Both the domain and the range for this role are 'Disease, Disorder or Finding'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R101", - "name": "Disease_Has_Primary_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Primary Anatomic Site", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Primary_Anatomic_Site", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Primary_Anatomic_Site", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to the anatomical site where the originating pathological process is located. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "This role can be viewed as a specialization of Disease_Has_Associated_Anatomic_Site." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R103", - "name": "Disease_Has_Normal_Tissue_Origin", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Normal Tissue Origin", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Normal_Tissue_Origin", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Normal_Tissue_Origin", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to the type of normal tissue in which the disease process began. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "This non-defining role represents non-essential characteristics which are true in some, but not all, cases, yet have an association frequent enough to be of interest." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R104", - "name": "Disease_Has_Normal_Cell_Origin", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Normal Cell Origin", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Normal_Cell_Origin", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Normal_Cell_Origin", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to the type of normal cell in which the disease process begins. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R105", - "name": "Disease_Has_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Abnormal Cell", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Abnormal_Cell", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Abnormal_Cell", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to the type of neoplastic cell present in and characteristic of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R108", - "name": "Disease_Has_Finding", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Finding", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Finding", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Finding", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to a clinical observation, sign or symptom present in and characteristic of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R115", - "name": "Disease_May_Have_Finding", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Finding", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Finding", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Finding", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a clinical observation, sign or symptom will only be observed in some cases of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R139", - "name": "Disease_Excludes_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Abnormal Cell", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Abnormal_Cell", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Abnormal_Cell", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_Abnormal_Cell. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R142", - "name": "Disease_Excludes_Finding", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Finding", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Finding", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Finding", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_Finding. Both the domain and range for this role are 'Disease, Disorder or Finding'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R124", - "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Mechanism Of Action", - "type": "Display_Name" - }, - { - "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", - "type": "FULL_SYN" - }, - { - "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to imply the interaction or binding of an active ingredient of a drug/chemical agent at the molecular level with its target. When possible, the role value should reflect the direct alteration of function of a target molecule or complex. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Biological Process', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R125", - "name": "Chemical_Or_Drug_Has_Physiologic_Effect", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Physiologic Effect", - "type": "Display_Name" - }, - { - "name": "Chemical_Or_Drug_Has_Physiologic_Effect", - "type": "FULL_SYN" - }, - { - "name": "Chemical_Or_Drug_Has_Physiologic_Effect", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to describe the primary detectable alterations of subcellular, cellular, tissue, or organ functions that directly result from alteration of function of a target biological molecule or complex caused by interaction of a therapeutic agent with a target molecule or complex. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Biological Process', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R146", - "name": "Chemical_Or_Drug_Affects_Gene_Product", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Affects Gene Product", - "type": "Display_Name" - }, - { - "name": "Chemical_Or_Drug_Affects_Gene_Product", - "type": "FULL_SYN" - }, - { - "name": "Chemical_Or_Drug_Affects_Gene_Product", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that a gene product is the target of a therapeutic agent. The role implies a direct interaction between the product and the therapeutic agent but it does not specify the type of association (e.g., involvement, interference, inhibition or cleavage). The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Gene Product', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R50", - "name": "Gene_Product_Has_Structural_Domain_Or_Motif", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Structural Domain Or Motif", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Has_Structural_Domain_Or_Motif", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Has_Structural_Domain_Or_Motif", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used specify information about protein domains or motifs present in a protein that can give insight into protein function. The domain and range for this role are 'Gene Product' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "We no longer curate this information and now favor linking out to externally curated databases. The source database for the link has yet to be decided." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R52", - "name": "Gene_Product_Has_Biochemical_Function", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Biochemical Function", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Has_Biochemical_Function", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Has_Biochemical_Function", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to denote the biochemical activity of a gene product. Both the domain and range for this role are 'Gene Product'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R53", - "name": "Gene_Product_Plays_Role_In_Biological_Process", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Plays Role In Biological Process", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Plays_Role_In_Biological_Process", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Plays_Role_In_Biological_Process", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that a gene product participates in a specific biological process. The domain and range for this role are 'Gene Product' and 'Biological Process', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "Considered by most researchers to be essential, definitional information about a gene product." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R54", - "name": "Gene_Product_Encoded_By_Gene", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Encoded By Gene", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Encoded_By_Gene", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Encoded_By_Gene", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a gene product and the gene that encodes it. The domain and range for this role are 'Gene Product' and 'Gene', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "The reciprocal relationship is represented in the property Gene_Encodes_Product" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R135", - "name": "Disease_Excludes_Primary_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Primary Anatomic Site", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Primary_Anatomic_Site", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Primary_Anatomic_Site", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_Associated_Anatomic_Site. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R72", - "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Affects Cell Type Or Tissue", - "type": "Display_Name" - }, - { - "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", - "type": "FULL_SYN" - }, - { - "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent the intended target cells for a chemical or drug. This does not include unintended target cells or tissues that are associated with side effects or toxicity of the chemical or drug. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R116", - "name": "Disease_May_Have_Associated_Disease", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Associated Disease", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Associated_Disease", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Associated_Disease", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that another disease or disorder will only be observed in some cases of the specified disease. Both the domain and the range for this role are 'Disease, Disorder or Finding'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R175", - "name": "Gene_Involved_In_Pathogenesis_Of_Disease", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Gene_Involved_In_Pathogenesis_Of_Disease", - "type": "FULL_SYN" - }, - { - "name": "Gene_Involved_In_Pathogenesis_Of_Disease", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a direct relationship between a gene and a disease. This restriction should only be used when an abnormality in a gene a causative event for a disease. The domain and range for this role are 'Gene' and 'Disease or Disorder', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R37", - "name": "Gene_Plays_Role_In_Process", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Plays Role In Process", - "type": "Display_Name" - }, - { - "name": "Gene_Plays_Role_In_Process", - "type": "FULL_SYN" - }, - { - "name": "Gene_Plays_Role_In_Process", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a gene and a biological process in which its encoded gene product(s) participate. The domain and range for this role are 'Gene' and 'Biological Process', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R132", - "name": "Gene_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Abnormality", - "type": "Display_Name" - }, - { - "name": "Gene_Has_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Gene_Has_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to establish a link between a gene and the genetic or molecular abnormalities that have been observed in human cells and tissues associated with cancers (e.g., over- or under-expressed, amplified, translocated). The domain and range for this role are 'Gene' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R133", - "name": "Gene_Product_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Abnormality", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Has_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Has_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to establish a link between a gene product and the molecular abnormalities that are observed in human cells and tissues in association with diseases such as cancers (e.g., over or under-expression of gene product). The domain and range for this role are 'Gene Product' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R41", - "name": "Gene_Found_In_Organism", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Found In Organism", - "type": "Display_Name" - }, - { - "name": "Gene_Found_In_Organism", - "type": "FULL_SYN" - }, - { - "name": "Gene_Found_In_Organism", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the organism of origin for a gene. It may be used to differentiate genes with the same name and functions that originate from different organisms. The domain and range for this role are 'Gene' and 'Organism', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "Currently, we only model human genes, but this role has obvious utility in future, if other organisms are modeled as well." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R40", - "name": "Gene_In_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "In Chromosomal Location", - "type": "Display_Name" - }, - { - "name": "Gene_In_Chromosomal_Location", - "type": "FULL_SYN" - }, - { - "name": "Gene_In_Chromosomal_Location", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a gene and its general location, specified by chromosomal band position (infrequently by chromosome number or chromosome arm). The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R46", - "name": "Gene_Product_Has_Associated_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Associated Anatomy", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Has_Associated_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Has_Associated_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify physical structures or typical subcellular locations of a gene product. The domain and range for this role are 'Gene Product' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R49", - "name": "Gene_Product_Expressed_In_Tissue", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Expressed In Tissue", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Expressed_In_Tissue", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Expressed_In_Tissue", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify that a normal tissue is the normal location for the expression of a gene product. The domain and range for this role are 'Gene Product' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "This information is often useful to researchers. However, we no longer curate this information and now favor linking out to externally curated databases. Source database for the link has yet to be decided." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R51", - "name": "Gene_Product_Is_Physical_Part_Of", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Physical Part Of", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Is_Physical_Part_Of", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Is_Physical_Part_Of", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that a gene product normally functions as a component of a \"functional complex\". Both the domain and range for this role are 'Gene Product'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R130", - "name": "Gene_Is_Element_In_Pathway", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Element In Pathway", - "type": "Display_Name" - }, - { - "name": "Gene_Is_Element_In_Pathway", - "type": "FULL_SYN" - }, - { - "name": "Gene_Is_Element_In_Pathway", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a gene and a biochemical pathway in which its encoded gene product(s) participate. This relationship is used only when gene has been implicated in a pathway by the curated source (Biocarta, KEGG or PID). The domain and range for this role are 'Gene' and 'Biochemical Pathway', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "In NCI Thesaurus, pathways are derived from BioCarta and KEGG and are associated with genes and proteins that comprise these pathways." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R131", - "name": "Gene_Product_Is_Element_In_Pathway", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Element In Pathway", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Is_Element_In_Pathway", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Is_Element_In_Pathway", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a gene product and a biochemical pathway in which it participates. This relationship is used only when a gene product has been implicated in a pathway by the curated source (Biocarta, KEGG or PID). 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Both the domain and range for this role are 'Gene Product'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "The role was originally intended for protein structure tagging (e.g., Phosphoprotein, Lipoprotein). Was extended to also tag for Membrane Protein, Protein Complex Subunit, etc." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R177", - "name": "Molecular_Abnormality_Involves_Gene", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Molecular_Abnormality_Involves_Gene", - "type": "FULL_SYN" - }, - { - "name": "Molecular_Abnormality_Involves_Gene", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a direct relationship between a molecular abnormality and a gene. The domain and range for this role are 'Molecular Abnormality' and 'Gene', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R178", - "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", - "type": "FULL_SYN" - }, - { - "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that a specific molecular variation or mutation in a gene encodes a gene product sequence variant. The domain and range for this role are 'Gene Mutant' and 'Gene Product Sequence Variation', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R179", - "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that a gene product sequence variation is encoded by a specific gene mutant. The domain and range for this role are 'Gene Product Sequence Variation' and 'Gene Mutant', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R182", - "name": "Gene_Product_Variant_Of_Gene_Product", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Gene_Product_Variant_Of_Gene_Product", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Variant_Of_Gene_Product", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that a gene product sequence variation is related to a wild-type gene product. The domain and range for this role are 'Gene Product Sequence Variation' and 'Gene Product', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R42", - "name": "Gene_Product_Is_Biomarker_Type", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Biomarker Type", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Is_Biomarker_Type", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Is_Biomarker_Type", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to designate the type of biomarker a gene product is; it points to a small tree of biomarker types (e.g., Disease Marker, Metabolic Marker, Prognostic Marker). The domain and range for this role are 'Gene Product' and 'Diagnostic or Prognostic Factor', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R45", - "name": "Gene_Product_Has_Organism_Source", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Organism Source", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Has_Organism_Source", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Has_Organism_Source", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to differentiate homologous proteins from different organisms. The domain and range for this role are 'Gene Product' and 'Organism', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R176", - "name": "Disease_Mapped_To_Gene", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Disease_Mapped_To_Gene", - "type": "FULL_SYN" - }, - { - "name": "Disease_Mapped_To_Gene", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a direct relationship between a disease, disorder or finding and a gene. This restriction can be used when a polymorphism or an abnormality in a gene is either a clinical marker for, a causative event for, or predisposes a subject to a disease. 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The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R174", - "name": "Disease_Mapped_To_Chromosome", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Disease_Mapped_To_Chromosome", - "type": "FULL_SYN" - }, - { - "name": "Disease_Mapped_To_Chromosome", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a disease, disorder or finding and a chromosome. This restriction should be used when a disease or disorder maps to a chromosome. It is not meant to be used when a specific cytogenetic abnormality is known (e.g. translocation, inversion). The domain and range for this role are 'Disease, Disorder or Finding' and 'Chromosome', respectively. The range for this role excludes chromosomal bands and physical locations.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R27", - "name": "Conceptual_Part_Of", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Part Of", - "type": "Display_Name" - }, - { - "name": "Conceptual_Part_Of", - "type": "FULL_SYN" - }, - { - "name": "Conceptual_Part_Of", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that a conceptual entity is a sub-entity of another conceptual entity. Both the domain and the range for this role are 'Conceptual Entity'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R167", - "name": "Procedure_Has_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Excised Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_Has_Excised_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_Has_Excised_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure always involves excision of some or all of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs. It should be used when a more specific role cannot be asserted. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R169", - "name": "Procedure_Has_Partially_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Partially Excised Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_Has_Partially_Excised_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_Has_Partially_Excised_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure always involves partial excision of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs, and where partial excision is explicit or can be inferred (e.g. biopsy). The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R82", - "name": "Anatomic_Structure_Is_Physical_Part_Of", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Physical Part Of", - "type": "Display_Name" - }, - { - "name": "Anatomic_Structure_Is_Physical_Part_Of", - "type": "FULL_SYN" - }, - { - "name": "Anatomic_Structure_Is_Physical_Part_Of", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that an anatomic structure has a physical association with a broader system or organ. Both the domain and range for this role are 'Anatomic Structure, System, or Substance'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R122", - "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Metabolized By Enzyme", - "type": "Display_Name" - }, - { - "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", - "type": "FULL_SYN" - }, - { - "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify that an enzyme is directly responsible for metabolizing a chemical or drug into an active form, inactive form, or both. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Gene Product', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R88", - "name": "Disease_Is_Stage", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Stage", - "type": "Display_Name" - }, - { - "name": "Disease_Is_Stage", - "type": "FULL_SYN" - }, - { - "name": "Disease_Is_Stage", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the disease stage of a disease, the extent to which a cancer has spread from the original site to other parts of the body. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Property or_Attribute', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R47", - "name": "Gene_Product_Is_Biomarker_Of", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Biomarker Of", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Is_Biomarker_Of", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Is_Biomarker_Of", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that presence of a gene product may contribute to clinical diagnosis, treatment selection, or prediction of clinical outcome. The domain and range for this role are 'Gene Product' and 'Disease, Disorder or Finding', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "This role does not imply a cause and effect." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R38", - "name": "Gene_Associated_With_Disease", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Associated With Disease", - "type": "Display_Name" - }, - { - "name": "Gene_Associated_With_Disease", - "type": "FULL_SYN" - }, - { - "name": "Gene_Associated_With_Disease", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that molecular abnormalities in a gene may be associated with the manifestation of a disease. The role is used to assert a link between a gene and a disease when the association is considered to have clinical relevance. The domain and range for this role are 'Gene' and 'Disease, Disorder or Finding', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R155", - "name": "Allele_In_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "In Chromosomal Location", - "type": "Display_Name" - }, - { - "name": "Allele_In_Chromosomal_Location", - "type": "FULL_SYN" - }, - { - "name": "Allele_In_Chromosomal_Location", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used for an allele whose location has changed from the wild-type gene chromosomal location. This role is used to assert a new location that differs from the wild-type gene chromosomal location. The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R137", - "name": "Disease_Excludes_Normal_Tissue_Origin", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Normal Tissue Origin", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Normal_Tissue_Origin", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Normal_Tissue_Origin", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_Normal_Tissue_Origin. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R138", - "name": "Disease_Excludes_Normal_Cell_Origin", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Normal Cell Origin", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Normal_Cell_Origin", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Normal_Cell_Origin", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_Normal_Cell_Origin. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R32", - "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Initiator Chemical Or Drug", - "type": "Display_Name" - }, - { - "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", - "type": "FULL_SYN" - }, - { - "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert the relationship between a biological process and a drug or chemical that stimulates the process. The role implies the direct physical interaction of a chemical or drug with a target molecule or complex that results in the initiation of the process. The domain and range for this role are 'Biological Process' and 'Drug, Food, Chemical or Biomedical Material', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R114", - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Cytogenetic Abnormality", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a particular cytogenetic abnormality will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R89", - "name": "Disease_May_Have_Molecular_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Molecular Abnormality", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Molecular_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Molecular_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a molecular abnormality will only be present in some cases of the disease. 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The domain and the range for this role are 'Disease, Disorder or Finding' and 'Property or_Attribute', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R172", - "name": "Regimen_Has_Accepted_Use_For_Disease", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Accepted Use For Disease", - "type": "Display_Name" - }, - { - "name": "Regimen_Has_Accepted_Use_For_Disease", - "type": "FULL_SYN" - }, - { - "name": "Regimen_Has_Accepted_Use_For_Disease", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to link established therapeutic regimens to their corresponding cancers or other diseases. Only established regimens published in NCI's Physician Data Query (PDQ), National Comprehensive Cancer Network (NCCN) Guidelines (http://www.nccn.org), or a limited number of other authoritative sources such as the Physician's Cancer Chemotherapy Manual are included. The domain and range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Disease, Disorder or Finding', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R171", - "name": "Procedure_Has_Completely_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Completely Excised Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_Has_Completely_Excised_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_Has_Completely_Excised_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure always is intended for the complete excision of the target anatomy. 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The domain and range for this role are 'Biological Process' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R81", - "name": "Anatomic_Structure_Has_Location", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Location", - "type": "Display_Name" - }, - { - "name": "Anatomic_Structure_Has_Location", - "type": "FULL_SYN" - }, - { - "name": "Anatomic_Structure_Has_Location", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate the physical location of an anatomic structure in the body. Both the domain and range for this role are 'Anatomic Structure, System, or Substance'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R48", - "name": "Gene_Product_Malfunction_Associated_With_Disease", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Malfunction Associated With Disease", - "type": "Display_Name" - }, - { - "name": "Gene_Product_Malfunction_Associated_With_Disease", - "type": "FULL_SYN" - }, - { - "name": "Gene_Product_Malfunction_Associated_With_Disease", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to indicate that molecular abnormalities in a gene product may be associated with the manifestation of a disease. The role is used to assert a link between a gene product and a disease when the association is considered to have clinical relevance. The domain and range for this role are 'Gene Product' and 'Disease, Disorder or Finding', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R140", - "name": "Disease_Excludes_Molecular_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Molecular Abnormality", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Molecular_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Molecular_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_ Molecular_Abnormality. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R25", - "name": "EO_Disease_Has_Associated_EO_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Associated EO Anatomy", - "type": "Display_Name" - }, - { - "name": "EO_Disease_Has_Associated_EO_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "EO_Disease_Has_Associated_EO_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the general site, structure or system where a pathological process is located in an experimental organism. The domain and range for this role are 'Experimental Organism Diagnosis' and 'Experimental Organism Anatomical Concept', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R24", - "name": "EO_Disease_Maps_To_Human_Disease", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Maps To Human Disease", - "type": "Display_Name" - }, - { - "name": "EO_Disease_Maps_To_Human_Disease", - "type": "FULL_SYN" - }, - { - "name": "EO_Disease_Maps_To_Human_Disease", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role is used to establish a relationship between a disease in an experimental organism and a corresponding human disease. The domain and the range for this role are 'Experimental Organism Diagnosis' and 'Disease, Disorder or Finding', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R26", - "name": "EO_Disease_Has_Property_Or_Attribute", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Property Or Attribute", - "type": "Display_Name" - }, - { - "name": "EO_Disease_Has_Property_Or_Attribute", - "type": "FULL_SYN" - }, - { - "name": "EO_Disease_Has_Property_Or_Attribute", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the clinical behavior, or other characteristic, of a disease in an experimental organism. The domain and range for this role are 'Experimental Organism Diagnosis' and 'Property or Attribute', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R141", - "name": "Disease_Excludes_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Cytogenetic Abnormality", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Cytogenetic_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Cytogenetic_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_Cytogenetic_Abnormality. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R107", - "name": "Disease_Has_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Cytogenetic Abnormality", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Cytogenetic_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Cytogenetic_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to the type of chromosomal abnormality present in the specified disease state. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R66", - "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Plays Role In Biological Process", - "type": "Display_Name" - }, - { - "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", - "type": "FULL_SYN" - }, - { - "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that an active ingredient of a drug or chemical agent influences a biological process. The role implies a direct association with a target biological molecule or complex involved in the process. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Biological Process', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "to be deleted" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R173", - "name": "Cytogenetic_Abnormality_Involves_Chromosome", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Cytogenetic_Abnormality_Involves_Chromosome", - "type": "FULL_SYN" - }, - { - "name": "Cytogenetic_Abnormality_Involves_Chromosome", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a direct relationship between a cytogenetic abnormality and a chromosome. The domain and range for this role are 'Cytogenetic Abnormality' and 'Chromosome', respectively. The range for this role excludes chromosomal bands and physical locations.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R28", - "name": "Biological_Process_Has_Initiator_Process", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Initiator Process", - "type": "Display_Name" - }, - { - "name": "Biological_Process_Has_Initiator_Process", - "type": "FULL_SYN" - }, - { - "name": "Biological_Process_Has_Initiator_Process", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that the initiation of the stated biological process is dependent on the progression or completion of another process. The role implies a direct physical and functional interaction of an element from the preceding biological process with a target molecule or complex involved in the initial stages of the stated process. Both the domain and the range for this role are 'Biological Process'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R35", - "name": "Biological_Process_Is_Part_Of_Process", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Part Of Process", - "type": "Display_Name" - }, - { - "name": "Biological_Process_Is_Part_Of_Process", - "type": "FULL_SYN" - }, - { - "name": "Biological_Process_Is_Part_Of_Process", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that a biological process operates as a component of another biological process. Both the domain and the range for this role is 'Biological Process'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R113", - "name": "Disease_May_Have_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Abnormal Cell", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Abnormal_Cell", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Abnormal_Cell", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that particular neoplastic cell types will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R102", - "name": "Disease_Has_Metastatic_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Metastatic Anatomic Site", - "type": "Display_Name" - }, - { - "name": "Disease_Has_Metastatic_Anatomic_Site", - "type": "FULL_SYN" - }, - { - "name": "Disease_Has_Metastatic_Anatomic_Site", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to relate a disease to the site of a metastatic lesion associated with the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "The role can be viewed as a specialization of Disease_Has_Associated_Anatomic_Site." - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R112", - "name": "Disease_May_Have_Normal_Cell_Origin", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Normal Cell Origin", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Normal_Cell_Origin", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Normal_Cell_Origin", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a normal cell type will only be the type of origin in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R34", - "name": "Biological_Process_Has_Result_Biological_Process", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Result Biological Process", - "type": "Display_Name" - }, - { - "name": "Biological_Process_Has_Result_Biological_Process", - "type": "FULL_SYN" - }, - { - "name": "Biological_Process_Has_Result_Biological_Process", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that the end result of a biological process initiates a subsequent biological process. Both the domain and the range for this role is 'Biological Process'.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R153", - "name": "Allele_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Abnormality", - "type": "Display_Name" - }, - { - "name": "Allele_Has_Abnormality", - "type": "FULL_SYN" - }, - { - "name": "Allele_Has_Abnormality", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Gene_Has_Abnormality that has been asserted for the gene class. This role is used to establish a link between a specific allele and genetic or molecular abnormalities that have been observed in human cells and tissues associated with cancer or another disease of interest. The domain and range for this role are 'Gene' and 'Molecular Abnormality', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R136", - "name": "Disease_Excludes_Metastatic_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Excludes Metastatic Anatomic Site", - "type": "Display_Name" - }, - { - "name": "Disease_Excludes_Metastatic_Anatomic_Site", - "type": "FULL_SYN" - }, - { - "name": "Disease_Excludes_Metastatic_Anatomic_Site", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used to override Disease_Has_ Metastatic_Anatomic_Site. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R166", - "name": "Procedure_May_Have_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Excised Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_May_Have_Excised_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_May_Have_Excised_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure sometimes results in excision of some or all of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs. It should be used when a more specific role cannot be asserted. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R168", - "name": "Procedure_May_Have_Partially_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Partially Excised Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_May_Have_Partially_Excised_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_May_Have_Partially_Excised_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure sometimes results in partial excision of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs, and where partial excision is explicit or can be inferred (e.g. biopsy). The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R170", - "name": "Procedure_May_Have_Completely_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Completely Excised Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_May_Have_Completely_Excised_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_May_Have_Completely_Excised_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure sometimes results in complete excision of the target anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs, and where complete excision is explicit or can be inferred. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R36", - "name": "Gene_Is_Biomarker_Type", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Is Biomarker Type", - "type": "Display_Name" - }, - { - "name": "Gene_Is_Biomarker_Type", - "type": "FULL_SYN" - }, - { - "name": "Gene_Is_Biomarker_Type", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to designate the type of biomarker a gene is; it points to a small tree of biomarker types (e.g., Disease Marker, Metabolic Marker, Prognostic Marker). The domain and range for this role are 'Gene' and 'Diagnostic or Prognostic Factor', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R31", - "name": "Biological_Process_Has_Result_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Result Anatomy", - "type": "Display_Name" - }, - { - "name": "Biological_Process_Has_Result_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Biological_Process_Has_Result_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that some biological event results in the formation of a subcellular complex, structure, cell, tissue or organ. This role is used to establish this relationship between the biological process and the anatomical factor formed. The domain and range for this role are 'Biological Process' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R29", - "name": "Biological_Process_Has_Result_Chemical_Or_Drug", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Result Chemical Or Drug", - "type": "Display_Name" - }, - { - "name": "Biological_Process_Has_Result_Chemical_Or_Drug", - "type": "FULL_SYN" - }, - { - "name": "Biological_Process_Has_Result_Chemical_Or_Drug", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that the endpoint of a biological process is the creation of a drug, chemical or biomedical material. The domain and range for this role are 'Biological Process' and 'Drug, Food, Chemical or Biomedical Material', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R150", - "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Affects Abnormal Cell", - "type": "Display_Name" - }, - { - "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", - "type": "FULL_SYN" - }, - { - "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to establish the relationship between a therapeutic agent and an abnormal cell type associated with a disease condition. By pointing to abnormal cells, the therapeutic target of a drug can be more clearly conveyed. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Abnormal Cell', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R111", - "name": "Disease_May_Have_Normal_Tissue_Origin", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "May Have Normal Tissue Origin", - "type": "Display_Name" - }, - { - "name": "Disease_May_Have_Normal_Tissue_Origin", - "type": "FULL_SYN" - }, - { - "name": "Disease_May_Have_Normal_Tissue_Origin", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to represent that a normal tissue type will only be the type of origin in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R39", - "name": "Gene_Is_Biomarker_Of", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Gene_Is_Biomarker_Of", - "type": "FULL_SYN" - }, - { - "name": "Gene_Is_Biomarker_Of", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert that expression or alteration of a gene is correlated with a particular disease or disease state or is predictive of the disease or disease state. The domain and range for this role are 'Gene' and Findings_and_Disorder_Kind, respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R23", - "name": "EO_Disease_Has_Associated_Cell_Type", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Associated Cell Type", - "type": "Display_Name" - }, - { - "name": "EO_Disease_Has_Associated_Cell_Type", - "type": "FULL_SYN" - }, - { - "name": "EO_Disease_Has_Associated_Cell_Type", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to specify the associated cell type of a disease in an experimental organism. The domain and range for this role are 'Experimental Organism Diagnosis' and 'Experimental Organism Anatomical Concept', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R145", - "name": "Gene_Has_Physical_Location", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Physical Location", - "type": "Display_Name" - }, - { - "name": "Gene_Has_Physical_Location", - "type": "FULL_SYN" - }, - { - "name": "Gene_Has_Physical_Location", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to link a gene with its physical extent on a chromosome, denoted by the chromosome number and start and end base positions (with numbering beginning at the telomere of the short p arm). The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "DesignNote", - "value": "The standard for the numbering system is that assigned by the Human Genome Consortium and found at Entrez Gene. The role is considered as supplementary to the role Gene_In Chromosomal_Location" - }, - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R165", - "name": "Procedure_Has_Imaged_Anatomy", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Imaged Anatomy", - "type": "Display_Name" - }, - { - "name": "Procedure_Has_Imaged_Anatomy", - "type": "FULL_SYN" - }, - { - "name": "Procedure_Has_Imaged_Anatomy", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between an imaging procedure and its target anatomy, specifically that a particular procedure always involves imaging the specified anatomy. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R159", - "name": "Allele_Has_Activity", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Has Activity", - "type": "Display_Name" - }, - { - "name": "Allele_Has_Activity", - "type": "FULL_SYN" - }, - { - "name": "Allele_Has_Activity", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert the observed level of activity associated with an allele in a given biological process, compared to the wild-type gene. The domain and range for this role are 'Gene' and 'Property or Attribute', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R158", - "name": "Allele_Plays_Altered_Role_In_Process", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Plays Altered Role In Process", - "type": "Display_Name" - }, - { - "name": "Allele_Plays_Altered_Role_In_Process", - "type": "FULL_SYN" - }, - { - "name": "Allele_Plays_Altered_Role_In_Process", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A specializing role which may be used for an allele whose encoded product functions differently (qualitatively or quantitatively) from the function asserted on its parent. It specializes the function of the wild type gene/gene product. The domain and range for this role are 'Gene' and 'Biological Process', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R160", - "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Plays Role In Metabolism Of Chemical Or Drug", - "type": "Display_Name" - }, - { - "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", - "type": "FULL_SYN" - }, - { - "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used to assert a relationship between a specific allele (product; enzyme) and drug-metabolizing efficacy. The domain and range for this role are 'Gene' and 'Drug, Food, Chemical or Biomedical Material', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "R156", - "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Absent From Wild-type Chromosomal Location", - "type": "Display_Name" - }, - { - "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", - "type": "FULL_SYN" - }, - { - "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A role used for an allele whose location has changed from the wild-type gene chromosomal location. This role is used to negate an inherited role relationship that is asserted between the parent gene class and a chromosomal location when an allele has moved (e.g., translocation, inversion, etc.). The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "R100", + "name": "Disease_Has_Associated_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Associated Anatomic Site", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Associated_Anatomic_Site", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Associated_Anatomic_Site", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to the general site, structure or system where the specific pathological process is located. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "The role, Disease_Has_Associated_Anatomic_Site, is more general than the role, Disease_Has_Primary_Anatomic_Site. Furthermore, when viewed with the role, Disease_Has_Metastatic_Anatomic_Site, there emerges a role hierarchy, where one role specializes the meaning of another, more general role. Roles relating disease to anatomy start with a general assertion of association, often at very high level (e.g. Skin Disorder and Skin), and then add more specific primary/metastatic associations where appropriate for more specific concepts." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R101", + "name": "Disease_Has_Primary_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Primary Anatomic Site", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Primary_Anatomic_Site", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Primary_Anatomic_Site", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to the anatomical site where the originating pathological process is located. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "This role can be viewed as a specialization of Disease_Has_Associated_Anatomic_Site." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R102", + "name": "Disease_Has_Metastatic_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Metastatic Anatomic Site", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Metastatic_Anatomic_Site", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Metastatic_Anatomic_Site", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to the site of a metastatic lesion associated with the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "The role can be viewed as a specialization of Disease_Has_Associated_Anatomic_Site." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R103", + "name": "Disease_Has_Normal_Tissue_Origin", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Normal Tissue Origin", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Normal_Tissue_Origin", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Normal_Tissue_Origin", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to the type of normal tissue in which the disease process began. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "This non-defining role represents non-essential characteristics which are true in some, but not all, cases, yet have an association frequent enough to be of interest." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R104", + "name": "Disease_Has_Normal_Cell_Origin", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Normal Cell Origin", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Normal_Cell_Origin", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Normal_Cell_Origin", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to the type of normal cell in which the disease process begins. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R105", + "name": "Disease_Has_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Abnormal Cell", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Abnormal_Cell", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Abnormal_Cell", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to the type of neoplastic cell present in and characteristic of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R106", + "name": "Disease_Has_Molecular_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Molecular Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Molecular_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Molecular_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to a molecular abnormality that is present in the specified disease state. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R107", + "name": "Disease_Has_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Cytogenetic Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Cytogenetic_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Cytogenetic_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to the type of chromosomal abnormality present in the specified disease state. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R108", + "name": "Disease_Has_Finding", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Finding", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Finding", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Finding", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to a clinical observation, sign or symptom present in and characteristic of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R110", + "name": "Disease_Is_Grade", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Grade", + "type": "Display_Name" + }, + { + "name": "Disease_Is_Grade", + "type": "FULL_SYN" + }, + { + "name": "Disease_Is_Grade", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to a grading system which classifies the cancer cells in terms of how abnormal they appear when examined under a microscope. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Property or_Attribute', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R111", + "name": "Disease_May_Have_Normal_Tissue_Origin", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Normal Tissue Origin", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Normal_Tissue_Origin", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Normal_Tissue_Origin", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a normal tissue type will only be the type of origin in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R112", + "name": "Disease_May_Have_Normal_Cell_Origin", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Normal Cell Origin", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Normal_Cell_Origin", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Normal_Cell_Origin", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a normal cell type will only be the type of origin in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R113", + "name": "Disease_May_Have_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Abnormal Cell", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Abnormal_Cell", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Abnormal_Cell", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that particular neoplastic cell types will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R114", + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Cytogenetic Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a particular cytogenetic abnormality will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R115", + "name": "Disease_May_Have_Finding", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Finding", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Finding", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Finding", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a clinical observation, sign or symptom will only be observed in some cases of the disease. Both the domain and range for this role are 'Disease, Disorder or Finding'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R116", + "name": "Disease_May_Have_Associated_Disease", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Associated Disease", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Associated_Disease", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Associated_Disease", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that another disease or disorder will only be observed in some cases of the specified disease. Both the domain and the range for this role are 'Disease, Disorder or Finding'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R122", + "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Metabolized By Enzyme", + "type": "Display_Name" + }, + { + "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", + "type": "FULL_SYN" + }, + { + "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify that an enzyme is directly responsible for metabolizing a chemical or drug into an active form, inactive form, or both. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Gene Product', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R123", + "name": "Chemotherapy_Regimen_Has_Component", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Component", + "type": "Display_Name" + }, + { + "name": "Chemotherapy_Regimen_Has_Component", + "type": "FULL_SYN" + }, + { + "name": "Chemotherapy_Regimen_Has_Component", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the component agents which are used in a particular chemotherapy regimen or agent combination. The domain and the range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Drug, Food, Chemical or Biomedical Material', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R124", + "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Mechanism Of Action", + "type": "Display_Name" + }, + { + "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", + "type": "FULL_SYN" + }, + { + "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to imply the interaction or binding of an active ingredient of a drug/chemical agent at the molecular level with its target. When possible, the role value should reflect the direct alteration of function of a target molecule or complex. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Biological Process', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R125", + "name": "Chemical_Or_Drug_Has_Physiologic_Effect", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Physiologic Effect", + "type": "Display_Name" + }, + { + "name": "Chemical_Or_Drug_Has_Physiologic_Effect", + "type": "FULL_SYN" + }, + { + "name": "Chemical_Or_Drug_Has_Physiologic_Effect", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to describe the primary detectable alterations of subcellular, cellular, tissue, or organ functions that directly result from alteration of function of a target biological molecule or complex caused by interaction of a therapeutic agent with a target molecule or complex. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Biological Process', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R126", + "name": "Disease_Has_Associated_Disease", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Associated Disease", + "type": "Display_Name" + }, + { + "name": "Disease_Has_Associated_Disease", + "type": "FULL_SYN" + }, + { + "name": "Disease_Has_Associated_Disease", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to relate a disease to another disease or disorder, but without specification or limitation of the relationship (causality or timing for example). Both the domain and the range for this role are 'Disease, Disorder or Finding'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R130", + "name": "Gene_Is_Element_In_Pathway", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Element In Pathway", + "type": "Display_Name" + }, + { + "name": "Gene_Is_Element_In_Pathway", + "type": "FULL_SYN" + }, + { + "name": "Gene_Is_Element_In_Pathway", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a gene and a biochemical pathway in which its encoded gene product(s) participate. This relationship is used only when gene has been implicated in a pathway by the curated source (Biocarta, KEGG or PID). The domain and range for this role are 'Gene' and 'Biochemical Pathway', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "In NCI Thesaurus, pathways are derived from BioCarta and KEGG and are associated with genes and proteins that comprise these pathways." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R131", + "name": "Gene_Product_Is_Element_In_Pathway", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Element In Pathway", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Is_Element_In_Pathway", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Is_Element_In_Pathway", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a gene product and a biochemical pathway in which it participates. This relationship is used only when a gene product has been implicated in a pathway by the curated source (Biocarta, KEGG or PID). The domain and range for this role are 'Gene Product' and 'Biochemical Pathway', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "In NCI Thesaurus, pathways are derived from BioCarta and KEGG and are associated with genes and proteins that comprise these pathways." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R132", + "name": "Gene_Has_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Abnormality", + "type": "Display_Name" + }, + { + "name": "Gene_Has_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Gene_Has_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to establish a link between a gene and the genetic or molecular abnormalities that have been observed in human cells and tissues associated with cancers (e.g., over- or under-expressed, amplified, translocated). The domain and range for this role are 'Gene' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R133", + "name": "Gene_Product_Has_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Abnormality", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Has_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Has_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to establish a link between a gene product and the molecular abnormalities that are observed in human cells and tissues in association with diseases such as cancers (e.g., over or under-expression of gene product). The domain and range for this role are 'Gene Product' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R135", + "name": "Disease_Excludes_Primary_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Primary Anatomic Site", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Primary_Anatomic_Site", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Primary_Anatomic_Site", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_Associated_Anatomic_Site. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R136", + "name": "Disease_Excludes_Metastatic_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Metastatic Anatomic Site", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Metastatic_Anatomic_Site", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Metastatic_Anatomic_Site", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_ Metastatic_Anatomic_Site. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R137", + "name": "Disease_Excludes_Normal_Tissue_Origin", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Normal Tissue Origin", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Normal_Tissue_Origin", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Normal_Tissue_Origin", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_Normal_Tissue_Origin. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R138", + "name": "Disease_Excludes_Normal_Cell_Origin", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Normal Cell Origin", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Normal_Cell_Origin", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Normal_Cell_Origin", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_Normal_Cell_Origin. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R139", + "name": "Disease_Excludes_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Abnormal Cell", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Abnormal_Cell", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Abnormal_Cell", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_Abnormal_Cell. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Abnormal Cell', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R140", + "name": "Disease_Excludes_Molecular_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Molecular Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Molecular_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Molecular_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_ Molecular_Abnormality. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R141", + "name": "Disease_Excludes_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Cytogenetic Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Cytogenetic_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Cytogenetic_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_Cytogenetic_Abnormality. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R142", + "name": "Disease_Excludes_Finding", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Excludes Finding", + "type": "Display_Name" + }, + { + "name": "Disease_Excludes_Finding", + "type": "FULL_SYN" + }, + { + "name": "Disease_Excludes_Finding", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Disease_Has_Finding. Both the domain and range for this role are 'Disease, Disorder or Finding'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R145", + "name": "Gene_Has_Physical_Location", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Physical Location", + "type": "Display_Name" + }, + { + "name": "Gene_Has_Physical_Location", + "type": "FULL_SYN" + }, + { + "name": "Gene_Has_Physical_Location", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to link a gene with its physical extent on a chromosome, denoted by the chromosome number and start and end base positions (with numbering beginning at the telomere of the short p arm). The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "The standard for the numbering system is that assigned by the Human Genome Consortium and found at Entrez Gene. The role is considered as supplementary to the role Gene_In Chromosomal_Location" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R146", + "name": "Chemical_Or_Drug_Affects_Gene_Product", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Affects Gene Product", + "type": "Display_Name" + }, + { + "name": "Chemical_Or_Drug_Affects_Gene_Product", + "type": "FULL_SYN" + }, + { + "name": "Chemical_Or_Drug_Affects_Gene_Product", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that a gene product is the target of a therapeutic agent. The role implies a direct interaction between the product and the therapeutic agent but it does not specify the type of association (e.g., involvement, interference, inhibition or cleavage). The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Gene Product', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R150", + "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Affects Abnormal Cell", + "type": "Display_Name" + }, + { + "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", + "type": "FULL_SYN" + }, + { + "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to establish the relationship between a therapeutic agent and an abnormal cell type associated with a disease condition. By pointing to abnormal cells, the therapeutic target of a drug can be more clearly conveyed. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Abnormal Cell', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R153", + "name": "Allele_Has_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Abnormality", + "type": "Display_Name" + }, + { + "name": "Allele_Has_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Allele_Has_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used to override Gene_Has_Abnormality that has been asserted for the gene class. This role is used to establish a link between a specific allele and genetic or molecular abnormalities that have been observed in human cells and tissues associated with cancer or another disease of interest. The domain and range for this role are 'Gene' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R155", + "name": "Allele_In_Chromosomal_Location", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "In Chromosomal Location", + "type": "Display_Name" + }, + { + "name": "Allele_In_Chromosomal_Location", + "type": "FULL_SYN" + }, + { + "name": "Allele_In_Chromosomal_Location", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used for an allele whose location has changed from the wild-type gene chromosomal location. This role is used to assert a new location that differs from the wild-type gene chromosomal location. The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R40", + "name": "Gene_In_Chromosomal_Location", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "In Chromosomal Location", + "type": "Display_Name" + }, + { + "name": "Gene_In_Chromosomal_Location", + "type": "FULL_SYN" + }, + { + "name": "Gene_In_Chromosomal_Location", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a gene and its general location, specified by chromosomal band position (infrequently by chromosome number or chromosome arm). The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R156", + "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Absent From Wild-type Chromosomal Location", + "type": "Display_Name" + }, + { + "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", + "type": "FULL_SYN" + }, + { + "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used for an allele whose location has changed from the wild-type gene chromosomal location. This role is used to negate an inherited role relationship that is asserted between the parent gene class and a chromosomal location when an allele has moved (e.g., translocation, inversion, etc.). The domain and range for this role are 'Gene' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R158", + "name": "Allele_Plays_Altered_Role_In_Process", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Plays Altered Role In Process", + "type": "Display_Name" + }, + { + "name": "Allele_Plays_Altered_Role_In_Process", + "type": "FULL_SYN" + }, + { + "name": "Allele_Plays_Altered_Role_In_Process", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A specializing role which may be used for an allele whose encoded product functions differently (qualitatively or quantitatively) from the function asserted on its parent. It specializes the function of the wild type gene/gene product. The domain and range for this role are 'Gene' and 'Biological Process', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R37", + "name": "Gene_Plays_Role_In_Process", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Plays Role In Process", + "type": "Display_Name" + }, + { + "name": "Gene_Plays_Role_In_Process", + "type": "FULL_SYN" + }, + { + "name": "Gene_Plays_Role_In_Process", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a gene and a biological process in which its encoded gene product(s) participate. The domain and range for this role are 'Gene' and 'Biological Process', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R159", + "name": "Allele_Has_Activity", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Activity", + "type": "Display_Name" + }, + { + "name": "Allele_Has_Activity", + "type": "FULL_SYN" + }, + { + "name": "Allele_Has_Activity", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert the observed level of activity associated with an allele in a given biological process, compared to the wild-type gene. The domain and range for this role are 'Gene' and 'Property or Attribute', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R160", + "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Plays Role In Metabolism Of Chemical Or Drug", + "type": "Display_Name" + }, + { + "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", + "type": "FULL_SYN" + }, + { + "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a specific allele (product; enzyme) and drug-metabolizing efficacy. The domain and range for this role are 'Gene' and 'Drug, Food, Chemical or Biomedical Material', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R163", + "name": "Procedure_Has_Target_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Target Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_Has_Target_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_Has_Target_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a procedure and its target anatomy, specifically that a particular procedure always has an association with the target anatomy. This role should be used when a more specific role cannot be asserted, including procedures targeting blood and other fluids. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R165", + "name": "Procedure_Has_Imaged_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Imaged Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_Has_Imaged_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_Has_Imaged_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between an imaging procedure and its target anatomy, specifically that a particular procedure always involves imaging the specified anatomy. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R166", + "name": "Procedure_May_Have_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Excised Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_May_Have_Excised_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_May_Have_Excised_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure sometimes results in excision of some or all of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs. It should be used when a more specific role cannot be asserted. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R167", + "name": "Procedure_Has_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Excised Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_Has_Excised_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_Has_Excised_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure always involves excision of some or all of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs. It should be used when a more specific role cannot be asserted. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R168", + "name": "Procedure_May_Have_Partially_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Partially Excised Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_May_Have_Partially_Excised_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_May_Have_Partially_Excised_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure sometimes results in partial excision of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs, and where partial excision is explicit or can be inferred (e.g. biopsy). The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R169", + "name": "Procedure_Has_Partially_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Partially Excised Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_Has_Partially_Excised_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_Has_Partially_Excised_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure always involves partial excision of the specified anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs, and where partial excision is explicit or can be inferred (e.g. biopsy). The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R170", + "name": "Procedure_May_Have_Completely_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Completely Excised Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_May_Have_Completely_Excised_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_May_Have_Completely_Excised_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure sometimes results in complete excision of the target anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs, and where complete excision is explicit or can be inferred. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R171", + "name": "Procedure_Has_Completely_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Completely Excised Anatomy", + "type": "Display_Name" + }, + { + "name": "Procedure_Has_Completely_Excised_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Procedure_Has_Completely_Excised_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a surgical procedure and its target anatomy, specifically that a particular procedure always is intended for the complete excision of the target anatomy. This role is applicable to procedures or techniques that involve excision of solid tissues or organs, and where complete excision is explicit or can be inferred. The domain and range for this role are 'Clinical or Research Activity' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R172", + "name": "Regimen_Has_Accepted_Use_For_Disease", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Accepted Use For Disease", + "type": "Display_Name" + }, + { + "name": "Regimen_Has_Accepted_Use_For_Disease", + "type": "FULL_SYN" + }, + { + "name": "Regimen_Has_Accepted_Use_For_Disease", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to link established therapeutic regimens to their corresponding cancers or other diseases. Only established regimens published in NCI's Physician Data Query (PDQ), National Comprehensive Cancer Network (NCCN) Guidelines (http://www.nccn.org), or a limited number of other authoritative sources such as the Physician's Cancer Chemotherapy Manual are included. The domain and range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Disease, Disorder or Finding', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R173", + "name": "Cytogenetic_Abnormality_Involves_Chromosome", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Cytogenetic_Abnormality_Involves_Chromosome", + "type": "FULL_SYN" + }, + { + "name": "Cytogenetic_Abnormality_Involves_Chromosome", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a direct relationship between a cytogenetic abnormality and a chromosome. 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The domain and range for this role are 'Disease, Disorder or Finding' and 'Chromosome', respectively. The range for this role excludes chromosomal bands and physical locations.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R175", + "name": "Gene_Involved_In_Pathogenesis_Of_Disease", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Gene_Involved_In_Pathogenesis_Of_Disease", + "type": "FULL_SYN" + }, + { + "name": "Gene_Involved_In_Pathogenesis_Of_Disease", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a direct relationship between a gene and a disease. This restriction should only be used when an abnormality in a gene a causative event for a disease. 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The domain and range for this role are 'Disease, Disorder or Finding' and 'Gene', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R177", + "name": "Molecular_Abnormality_Involves_Gene", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Molecular_Abnormality_Involves_Gene", + "type": "FULL_SYN" + }, + { + "name": "Molecular_Abnormality_Involves_Gene", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a direct relationship between a molecular abnormality and a gene. The domain and range for this role are 'Molecular Abnormality' and 'Gene', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R178", + "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", + "type": "FULL_SYN" + }, + { + "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that a specific molecular variation or mutation in a gene encodes a gene product sequence variant. The domain and range for this role are 'Gene Mutant' and 'Gene Product Sequence Variation', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R179", + "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that a gene product sequence variation is encoded by a specific gene mutant. The domain and range for this role are 'Gene Product Sequence Variation' and 'Gene Mutant', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R182", + "name": "Gene_Product_Variant_Of_Gene_Product", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Gene_Product_Variant_Of_Gene_Product", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Variant_Of_Gene_Product", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that a gene product sequence variation is related to a wild-type gene product. The domain and range for this role are 'Gene Product Sequence Variation' and 'Gene Product', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R23", + "name": "EO_Disease_Has_Associated_Cell_Type", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Associated Cell Type", + "type": "Display_Name" + }, + { + "name": "EO_Disease_Has_Associated_Cell_Type", + "type": "FULL_SYN" + }, + { + "name": "EO_Disease_Has_Associated_Cell_Type", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the associated cell type of a disease in an experimental organism. The domain and range for this role are 'Experimental Organism Diagnosis' and 'Experimental Organism Anatomical Concept', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R24", + "name": "EO_Disease_Maps_To_Human_Disease", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Maps To Human Disease", + "type": "Display_Name" + }, + { + "name": "EO_Disease_Maps_To_Human_Disease", + "type": "FULL_SYN" + }, + { + "name": "EO_Disease_Maps_To_Human_Disease", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role is used to establish a relationship between a disease in an experimental organism and a corresponding human disease. The domain and the range for this role are 'Experimental Organism Diagnosis' and 'Disease, Disorder or Finding', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R25", + "name": "EO_Disease_Has_Associated_EO_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Associated EO Anatomy", + "type": "Display_Name" + }, + { + "name": "EO_Disease_Has_Associated_EO_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "EO_Disease_Has_Associated_EO_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the general site, structure or system where a pathological process is located in an experimental organism. The domain and range for this role are 'Experimental Organism Diagnosis' and 'Experimental Organism Anatomical Concept', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R26", + "name": "EO_Disease_Has_Property_Or_Attribute", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Property Or Attribute", + "type": "Display_Name" + }, + { + "name": "EO_Disease_Has_Property_Or_Attribute", + "type": "FULL_SYN" + }, + { + "name": "EO_Disease_Has_Property_Or_Attribute", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the clinical behavior, or other characteristic, of a disease in an experimental organism. The domain and range for this role are 'Experimental Organism Diagnosis' and 'Property or Attribute', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R27", + "name": "Conceptual_Part_Of", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Part Of", + "type": "Display_Name" + }, + { + "name": "Conceptual_Part_Of", + "type": "FULL_SYN" + }, + { + "name": "Conceptual_Part_Of", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that a conceptual entity is a sub-entity of another conceptual entity. Both the domain and the range for this role are 'Conceptual Entity'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R28", + "name": "Biological_Process_Has_Initiator_Process", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Initiator Process", + "type": "Display_Name" + }, + { + "name": "Biological_Process_Has_Initiator_Process", + "type": "FULL_SYN" + }, + { + "name": "Biological_Process_Has_Initiator_Process", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that the initiation of the stated biological process is dependent on the progression or completion of another process. The role implies a direct physical and functional interaction of an element from the preceding biological process with a target molecule or complex involved in the initial stages of the stated process. Both the domain and the range for this role are 'Biological Process'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R29", + "name": "Biological_Process_Has_Result_Chemical_Or_Drug", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Result Chemical Or Drug", + "type": "Display_Name" + }, + { + "name": "Biological_Process_Has_Result_Chemical_Or_Drug", + "type": "FULL_SYN" + }, + { + "name": "Biological_Process_Has_Result_Chemical_Or_Drug", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that the endpoint of a biological process is the creation of a drug, chemical or biomedical material. The domain and range for this role are 'Biological Process' and 'Drug, Food, Chemical or Biomedical Material', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R30", + "name": "Biological_Process_Has_Associated_Location", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Associated Location", + "type": "Display_Name" + }, + { + "name": "Biological_Process_Has_Associated_Location", + "type": "FULL_SYN" + }, + { + "name": "Biological_Process_Has_Associated_Location", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate the organ, organ system, cellular or subcellular location where a process occurs in a living system. The domain and range for this role are 'Biological Process' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R31", + "name": "Biological_Process_Has_Result_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Result Anatomy", + "type": "Display_Name" + }, + { + "name": "Biological_Process_Has_Result_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Biological_Process_Has_Result_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that some biological event results in the formation of a subcellular complex, structure, cell, tissue or organ. This role is used to establish this relationship between the biological process and the anatomical factor formed. The domain and range for this role are 'Biological Process' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R32", + "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Initiator Chemical Or Drug", + "type": "Display_Name" + }, + { + "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", + "type": "FULL_SYN" + }, + { + "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert the relationship between a biological process and a drug or chemical that stimulates the process. The role implies the direct physical interaction of a chemical or drug with a target molecule or complex that results in the initiation of the process. The domain and range for this role are 'Biological Process' and 'Drug, Food, Chemical or Biomedical Material', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R34", + "name": "Biological_Process_Has_Result_Biological_Process", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Result Biological Process", + "type": "Display_Name" + }, + { + "name": "Biological_Process_Has_Result_Biological_Process", + "type": "FULL_SYN" + }, + { + "name": "Biological_Process_Has_Result_Biological_Process", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that the end result of a biological process initiates a subsequent biological process. Both the domain and the range for this role is 'Biological Process'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R35", + "name": "Biological_Process_Is_Part_Of_Process", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Part Of Process", + "type": "Display_Name" + }, + { + "name": "Biological_Process_Is_Part_Of_Process", + "type": "FULL_SYN" + }, + { + "name": "Biological_Process_Is_Part_Of_Process", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that a biological process operates as a component of another biological process. Both the domain and the range for this role is 'Biological Process'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R36", + "name": "Gene_Is_Biomarker_Type", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Biomarker Type", + "type": "Display_Name" + }, + { + "name": "Gene_Is_Biomarker_Type", + "type": "FULL_SYN" + }, + { + "name": "Gene_Is_Biomarker_Type", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to designate the type of biomarker a gene is; it points to a small tree of biomarker types (e.g., Disease Marker, Metabolic Marker, Prognostic Marker). The domain and range for this role are 'Gene' and 'Diagnostic or Prognostic Factor', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R38", + "name": "Gene_Associated_With_Disease", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Associated With Disease", + "type": "Display_Name" + }, + { + "name": "Gene_Associated_With_Disease", + "type": "FULL_SYN" + }, + { + "name": "Gene_Associated_With_Disease", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that molecular abnormalities in a gene may be associated with the manifestation of a disease. The role is used to assert a link between a gene and a disease when the association is considered to have clinical relevance. The domain and range for this role are 'Gene' and 'Disease, Disorder or Finding', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R39", + "name": "Gene_Is_Biomarker_Of", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Gene_Is_Biomarker_Of", + "type": "FULL_SYN" + }, + { + "name": "Gene_Is_Biomarker_Of", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that expression or alteration of a gene is correlated with a particular disease or disease state or is predictive of the disease or disease state. The domain and range for this role are 'Gene' and Findings_and_Disorder_Kind, respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R41", + "name": "Gene_Found_In_Organism", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Found In Organism", + "type": "Display_Name" + }, + { + "name": "Gene_Found_In_Organism", + "type": "FULL_SYN" + }, + { + "name": "Gene_Found_In_Organism", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the organism of origin for a gene. It may be used to differentiate genes with the same name and functions that originate from different organisms. The domain and range for this role are 'Gene' and 'Organism', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "Currently, we only model human genes, but this role has obvious utility in future, if other organisms are modeled as well." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R42", + "name": "Gene_Product_Is_Biomarker_Type", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Biomarker Type", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Is_Biomarker_Type", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Is_Biomarker_Type", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to designate the type of biomarker a gene product is; it points to a small tree of biomarker types (e.g., Disease Marker, Metabolic Marker, Prognostic Marker). The domain and range for this role are 'Gene Product' and 'Diagnostic or Prognostic Factor', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R44", + "name": "Gene_Product_Has_Chemical_Classification", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Chemical Classification", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Has_Chemical_Classification", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Has_Chemical_Classification", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the physical structure type of a protein molecule (e.g. metalloprotein, transmembrane protein). Both the domain and range for this role are 'Gene Product'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "The role was originally intended for protein structure tagging (e.g., Phosphoprotein, Lipoprotein). Was extended to also tag for Membrane Protein, Protein Complex Subunit, etc." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R45", + "name": "Gene_Product_Has_Organism_Source", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Organism Source", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Has_Organism_Source", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Has_Organism_Source", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to differentiate homologous proteins from different organisms. The domain and range for this role are 'Gene Product' and 'Organism', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R46", + "name": "Gene_Product_Has_Associated_Anatomy", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Associated Anatomy", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Has_Associated_Anatomy", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Has_Associated_Anatomy", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify physical structures or typical subcellular locations of a gene product. The domain and range for this role are 'Gene Product' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R47", + "name": "Gene_Product_Is_Biomarker_Of", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Biomarker Of", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Is_Biomarker_Of", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Is_Biomarker_Of", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that presence of a gene product may contribute to clinical diagnosis, treatment selection, or prediction of clinical outcome. The domain and range for this role are 'Gene Product' and 'Disease, Disorder or Finding', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "This role does not imply a cause and effect." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R48", + "name": "Gene_Product_Malfunction_Associated_With_Disease", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Malfunction Associated With Disease", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Malfunction_Associated_With_Disease", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Malfunction_Associated_With_Disease", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that molecular abnormalities in a gene product may be associated with the manifestation of a disease. The role is used to assert a link between a gene product and a disease when the association is considered to have clinical relevance. The domain and range for this role are 'Gene Product' and 'Disease, Disorder or Finding', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R49", + "name": "Gene_Product_Expressed_In_Tissue", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Expressed In Tissue", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Expressed_In_Tissue", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Expressed_In_Tissue", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify that a normal tissue is the normal location for the expression of a gene product. The domain and range for this role are 'Gene Product' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "This information is often useful to researchers. However, we no longer curate this information and now favor linking out to externally curated databases. Source database for the link has yet to be decided." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R50", + "name": "Gene_Product_Has_Structural_Domain_Or_Motif", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Structural Domain Or Motif", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Has_Structural_Domain_Or_Motif", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Has_Structural_Domain_Or_Motif", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used specify information about protein domains or motifs present in a protein that can give insight into protein function. The domain and range for this role are 'Gene Product' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "We no longer curate this information and now favor linking out to externally curated databases. The source database for the link has yet to be decided." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R51", + "name": "Gene_Product_Is_Physical_Part_Of", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Physical Part Of", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Is_Physical_Part_Of", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Is_Physical_Part_Of", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that a gene product normally functions as a component of a \"functional complex\". Both the domain and range for this role are 'Gene Product'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R52", + "name": "Gene_Product_Has_Biochemical_Function", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Biochemical Function", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Has_Biochemical_Function", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Has_Biochemical_Function", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to denote the biochemical activity of a gene product. Both the domain and range for this role are 'Gene Product'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R53", + "name": "Gene_Product_Plays_Role_In_Biological_Process", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Plays Role In Biological Process", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Plays_Role_In_Biological_Process", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Plays_Role_In_Biological_Process", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that a gene product participates in a specific biological process. The domain and range for this role are 'Gene Product' and 'Biological Process', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "Considered by most researchers to be essential, definitional information about a gene product." + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R54", + "name": "Gene_Product_Encoded_By_Gene", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Encoded By Gene", + "type": "Display_Name" + }, + { + "name": "Gene_Product_Encoded_By_Gene", + "type": "FULL_SYN" + }, + { + "name": "Gene_Product_Encoded_By_Gene", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert a relationship between a gene product and the gene that encodes it. The domain and range for this role are 'Gene Product' and 'Gene', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "The reciprocal relationship is represented in the property Gene_Encodes_Product" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R66", + "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Plays Role In Biological Process", + "type": "Display_Name" + }, + { + "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", + "type": "FULL_SYN" + }, + { + "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to assert that an active ingredient of a drug or chemical agent influences a biological process. The role implies a direct association with a target biological molecule or complex involved in the process. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Biological Process', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "DesignNote", + "value": "to be deleted" + }, + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R72", + "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Affects Cell Type Or Tissue", + "type": "Display_Name" + }, + { + "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", + "type": "FULL_SYN" + }, + { + "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent the intended target cells for a chemical or drug. This does not include unintended target cells or tissues that are associated with side effects or toxicity of the chemical or drug. The domain and range for this role are 'Drug, Food, Chemical or Biomedical Material' and 'Anatomic Structure, System, or Substance', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R81", + "name": "Anatomic_Structure_Has_Location", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Has Location", + "type": "Display_Name" + }, + { + "name": "Anatomic_Structure_Has_Location", + "type": "FULL_SYN" + }, + { + "name": "Anatomic_Structure_Has_Location", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate the physical location of an anatomic structure in the body. Both the domain and range for this role are 'Anatomic Structure, System, or Substance'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R82", + "name": "Anatomic_Structure_Is_Physical_Part_Of", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Physical Part Of", + "type": "Display_Name" + }, + { + "name": "Anatomic_Structure_Is_Physical_Part_Of", + "type": "FULL_SYN" + }, + { + "name": "Anatomic_Structure_Is_Physical_Part_Of", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to indicate that an anatomic structure has a physical association with a broader system or organ. Both the domain and range for this role are 'Anatomic Structure, System, or Substance'.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R88", + "name": "Disease_Is_Stage", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Is Stage", + "type": "Display_Name" + }, + { + "name": "Disease_Is_Stage", + "type": "FULL_SYN" + }, + { + "name": "Disease_Is_Stage", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to specify the disease stage of a disease, the extent to which a cancer has spread from the original site to other parts of the body. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Property or_Attribute', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "R89", + "name": "Disease_May_Have_Molecular_Abnormality", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "May Have Molecular Abnormality", + "type": "Display_Name" + }, + { + "name": "Disease_May_Have_Molecular_Abnormality", + "type": "FULL_SYN" + }, + { + "name": "Disease_May_Have_Molecular_Abnormality", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A role used to represent that a molecular abnormality will only be present in some cases of the disease. The domain and the range for this role are 'Disease, Disorder or Finding' and 'Molecular Abnormality', respectively.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-roles.txt b/curl-examples/samples/get-roles.txt index 8e5c6623..bcd20983 100644 --- a/curl-examples/samples/get-roles.txt +++ b/curl-examples/samples/get-roles.txt @@ -1,573 +1,573 @@ -[ - { - "code": "R123", - "name": "Chemotherapy_Regimen_Has_Component", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R163", - "name": "Procedure_Has_Target_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R100", - "name": "Disease_Has_Associated_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R126", - "name": "Disease_Has_Associated_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R101", - "name": "Disease_Has_Primary_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R103", - "name": "Disease_Has_Normal_Tissue_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R104", - "name": "Disease_Has_Normal_Cell_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R105", - "name": "Disease_Has_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R108", - "name": "Disease_Has_Finding", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R115", - "name": "Disease_May_Have_Finding", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R139", - "name": "Disease_Excludes_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R142", - "name": "Disease_Excludes_Finding", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R124", - "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R125", - "name": "Chemical_Or_Drug_Has_Physiologic_Effect", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R146", - "name": "Chemical_Or_Drug_Affects_Gene_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R50", - "name": "Gene_Product_Has_Structural_Domain_Or_Motif", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R52", - "name": "Gene_Product_Has_Biochemical_Function", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R53", - "name": "Gene_Product_Plays_Role_In_Biological_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R54", - "name": "Gene_Product_Encoded_By_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R135", - "name": "Disease_Excludes_Primary_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R72", - "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R116", - "name": "Disease_May_Have_Associated_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R175", - "name": "Gene_Involved_In_Pathogenesis_Of_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R37", - "name": "Gene_Plays_Role_In_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R132", - "name": "Gene_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R133", - "name": "Gene_Product_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R41", - "name": "Gene_Found_In_Organism", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R40", - "name": "Gene_In_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R46", - "name": "Gene_Product_Has_Associated_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R49", - "name": "Gene_Product_Expressed_In_Tissue", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R51", - "name": "Gene_Product_Is_Physical_Part_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R130", - "name": "Gene_Is_Element_In_Pathway", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R131", - "name": "Gene_Product_Is_Element_In_Pathway", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R44", - "name": "Gene_Product_Has_Chemical_Classification", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R177", - "name": "Molecular_Abnormality_Involves_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R178", - "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R179", - "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R182", - "name": "Gene_Product_Variant_Of_Gene_Product", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R42", - "name": "Gene_Product_Is_Biomarker_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R45", - "name": "Gene_Product_Has_Organism_Source", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R176", - "name": "Disease_Mapped_To_Gene", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R106", - "name": "Disease_Has_Molecular_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R174", - "name": "Disease_Mapped_To_Chromosome", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R27", - "name": "Conceptual_Part_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R167", - "name": "Procedure_Has_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R169", - "name": "Procedure_Has_Partially_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R82", - "name": "Anatomic_Structure_Is_Physical_Part_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R122", - "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R88", - "name": "Disease_Is_Stage", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R47", - "name": "Gene_Product_Is_Biomarker_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R38", - "name": "Gene_Associated_With_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R155", - "name": "Allele_In_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R137", - "name": "Disease_Excludes_Normal_Tissue_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R138", - "name": "Disease_Excludes_Normal_Cell_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R32", - "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R114", - "name": "Disease_May_Have_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R89", - "name": "Disease_May_Have_Molecular_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R110", - "name": "Disease_Is_Grade", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R172", - "name": "Regimen_Has_Accepted_Use_For_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R171", - "name": "Procedure_Has_Completely_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R30", - "name": "Biological_Process_Has_Associated_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R81", - "name": "Anatomic_Structure_Has_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R48", - "name": "Gene_Product_Malfunction_Associated_With_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R140", - "name": "Disease_Excludes_Molecular_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R25", - "name": "EO_Disease_Has_Associated_EO_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R24", - "name": "EO_Disease_Maps_To_Human_Disease", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R26", - "name": "EO_Disease_Has_Property_Or_Attribute", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R141", - "name": "Disease_Excludes_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R107", - "name": "Disease_Has_Cytogenetic_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R66", - "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R173", - "name": "Cytogenetic_Abnormality_Involves_Chromosome", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R28", - "name": "Biological_Process_Has_Initiator_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R35", - "name": "Biological_Process_Is_Part_Of_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R113", - "name": "Disease_May_Have_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R102", - "name": "Disease_Has_Metastatic_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R112", - "name": "Disease_May_Have_Normal_Cell_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R34", - "name": "Biological_Process_Has_Result_Biological_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R153", - "name": "Allele_Has_Abnormality", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R136", - "name": "Disease_Excludes_Metastatic_Anatomic_Site", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R166", - "name": "Procedure_May_Have_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R168", - "name": "Procedure_May_Have_Partially_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R170", - "name": "Procedure_May_Have_Completely_Excised_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R36", - "name": "Gene_Is_Biomarker_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R31", - "name": "Biological_Process_Has_Result_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R29", - "name": "Biological_Process_Has_Result_Chemical_Or_Drug", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R150", - "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R111", - "name": "Disease_May_Have_Normal_Tissue_Origin", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R39", - "name": "Gene_Is_Biomarker_Of", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R23", - "name": "EO_Disease_Has_Associated_Cell_Type", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R145", - "name": "Gene_Has_Physical_Location", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R165", - "name": "Procedure_Has_Imaged_Anatomy", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R159", - "name": "Allele_Has_Activity", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R158", - "name": "Allele_Plays_Altered_Role_In_Process", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R160", - "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "R156", - "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", - "terminology": "ncit", - "version": "25.02d" - } -] - +[ + { + "code": "R100", + "name": "Disease_Has_Associated_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R101", + "name": "Disease_Has_Primary_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R102", + "name": "Disease_Has_Metastatic_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R103", + "name": "Disease_Has_Normal_Tissue_Origin", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R104", + "name": "Disease_Has_Normal_Cell_Origin", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R105", + "name": "Disease_Has_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R106", + "name": "Disease_Has_Molecular_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R107", + "name": "Disease_Has_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R108", + "name": "Disease_Has_Finding", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R110", + "name": "Disease_Is_Grade", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R111", + "name": "Disease_May_Have_Normal_Tissue_Origin", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R112", + "name": "Disease_May_Have_Normal_Cell_Origin", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R113", + "name": "Disease_May_Have_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R114", + "name": "Disease_May_Have_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R115", + "name": "Disease_May_Have_Finding", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R116", + "name": "Disease_May_Have_Associated_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R122", + "name": "Chemical_Or_Drug_Is_Metabolized_By_Enzyme", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R123", + "name": "Chemotherapy_Regimen_Has_Component", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R124", + "name": "Chemical_Or_Drug_Has_Mechanism_Of_Action", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R125", + "name": "Chemical_Or_Drug_Has_Physiologic_Effect", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R126", + "name": "Disease_Has_Associated_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R130", + "name": "Gene_Is_Element_In_Pathway", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R131", + "name": "Gene_Product_Is_Element_In_Pathway", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R132", + "name": "Gene_Has_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R133", + "name": "Gene_Product_Has_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R135", + "name": "Disease_Excludes_Primary_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R136", + "name": "Disease_Excludes_Metastatic_Anatomic_Site", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R137", + "name": "Disease_Excludes_Normal_Tissue_Origin", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R138", + "name": "Disease_Excludes_Normal_Cell_Origin", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R139", + "name": "Disease_Excludes_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R140", + "name": "Disease_Excludes_Molecular_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R141", + "name": "Disease_Excludes_Cytogenetic_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R142", + "name": "Disease_Excludes_Finding", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R145", + "name": "Gene_Has_Physical_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R146", + "name": "Chemical_Or_Drug_Affects_Gene_Product", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R150", + "name": "Chemical_Or_Drug_Affects_Abnormal_Cell", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R153", + "name": "Allele_Has_Abnormality", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R155", + "name": "Allele_In_Chromosomal_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R40", + "name": "Gene_In_Chromosomal_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R156", + "name": "Allele_Absent_From_Wild-type_Chromosomal_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R158", + "name": "Allele_Plays_Altered_Role_In_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R37", + "name": "Gene_Plays_Role_In_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R159", + "name": "Allele_Has_Activity", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R160", + "name": "Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R163", + "name": "Procedure_Has_Target_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R165", + "name": "Procedure_Has_Imaged_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R166", + "name": "Procedure_May_Have_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R167", + "name": "Procedure_Has_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R168", + "name": "Procedure_May_Have_Partially_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R169", + "name": "Procedure_Has_Partially_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R170", + "name": "Procedure_May_Have_Completely_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R171", + "name": "Procedure_Has_Completely_Excised_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R172", + "name": "Regimen_Has_Accepted_Use_For_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R173", + "name": "Cytogenetic_Abnormality_Involves_Chromosome", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R174", + "name": "Disease_Mapped_To_Chromosome", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R175", + "name": "Gene_Involved_In_Pathogenesis_Of_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R176", + "name": "Disease_Mapped_To_Gene", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R177", + "name": "Molecular_Abnormality_Involves_Gene", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R178", + "name": "Gene_Mutant_Encodes_Gene_Product_Sequence_Variation", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R179", + "name": "Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R182", + "name": "Gene_Product_Variant_Of_Gene_Product", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R23", + "name": "EO_Disease_Has_Associated_Cell_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R24", + "name": "EO_Disease_Maps_To_Human_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R25", + "name": "EO_Disease_Has_Associated_EO_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R26", + "name": "EO_Disease_Has_Property_Or_Attribute", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R27", + "name": "Conceptual_Part_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R28", + "name": "Biological_Process_Has_Initiator_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R29", + "name": "Biological_Process_Has_Result_Chemical_Or_Drug", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R30", + "name": "Biological_Process_Has_Associated_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R31", + "name": "Biological_Process_Has_Result_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R32", + "name": "Biological_Process_Has_Initiator_Chemical_Or_Drug", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R34", + "name": "Biological_Process_Has_Result_Biological_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R35", + "name": "Biological_Process_Is_Part_Of_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R36", + "name": "Gene_Is_Biomarker_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R38", + "name": "Gene_Associated_With_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R39", + "name": "Gene_Is_Biomarker_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R41", + "name": "Gene_Found_In_Organism", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R42", + "name": "Gene_Product_Is_Biomarker_Type", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R44", + "name": "Gene_Product_Has_Chemical_Classification", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R45", + "name": "Gene_Product_Has_Organism_Source", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R46", + "name": "Gene_Product_Has_Associated_Anatomy", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R47", + "name": "Gene_Product_Is_Biomarker_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R48", + "name": "Gene_Product_Malfunction_Associated_With_Disease", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R49", + "name": "Gene_Product_Expressed_In_Tissue", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R50", + "name": "Gene_Product_Has_Structural_Domain_Or_Motif", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R51", + "name": "Gene_Product_Is_Physical_Part_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R52", + "name": "Gene_Product_Has_Biochemical_Function", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R53", + "name": "Gene_Product_Plays_Role_In_Biological_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R54", + "name": "Gene_Product_Encoded_By_Gene", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R66", + "name": "Chemical_Or_Drug_Plays_Role_In_Biological_Process", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R72", + "name": "Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R81", + "name": "Anatomic_Structure_Has_Location", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R82", + "name": "Anatomic_Structure_Is_Physical_Part_Of", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R88", + "name": "Disease_Is_Stage", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "R89", + "name": "Disease_May_Have_Molecular_Abnormality", + "terminology": "ncit", + "version": "25.07d" + } +] + diff --git a/curl-examples/samples/get-subset-by-code.txt b/curl-examples/samples/get-subset-by-code.txt index efc9105c..aa7ed7cd 100644 --- a/curl-examples/samples/get-subset-by-code.txt +++ b/curl-examples/samples/get-subset-by-code.txt @@ -1,280 +1,287 @@ -{ - "code": "C81222", - "name": "CDISC ADaM Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "leaf": false, - "active": true, - "synonyms": [ - { - "name": "ADaM", - "termType": "PT", - "type": "FULL_SYN", - "source": "CDISC" - }, - { - "name": "CDISC ADaM Terminology", - "termType": "PT", - "type": "FULL_SYN", - "source": "NCI" - }, - { - "name": "CDISC ADaM Terminology", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "The terminology subset that includes terms pertaining to the Clinical Data Interchange Standards Consortium (CDISC) Analysis Data Model (ADaM).", - "type": "ALT_DEFINITION", - "source": "CDISC" - }, - { - "definition": "The terminology subset that includes terms pertaining to the Clinical Data Interchange Standards Consortium (CDISC) Analysis Data Model (ADaM).", - "type": "DEFINITION", - "source": "NCI" - } - ], - "properties": [ - { - "type": "Contributing_Source", - "value": "CDISC" - }, - { - "type": "Legacy Concept Name", - "value": "CDISC_ADaM_Terminology" - }, - { - "type": "Publish_Value_Set", - "value": "Yes" - }, - { - "type": "Semantic_Type", - "value": "Intellectual Product" - }, - { - "type": "Term_Browser_Value_Set_Description", - "value": "

The terminology subset that includes terms pertaining to the Clinical Data Interchange Standards Consortium (CDISC) Analysis Data Model (ADaM).

The terminology can be downloaded at this location: CDISC ADaM Terminology.

" - }, - { - "type": "UMLS_CUI", - "value": "C2825525" - }, - { - "type": "Value_Set_Pair", - "value": "No" - } - ], - "children": [ - { - "code": "C208382", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C208381", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/SDTM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204411", - "name": "CDISC ADaM Analysis Stratum Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187458", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187457", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81223", - "name": "CDISC ADaM Date Imputation Flag Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81224", - "name": "CDISC ADaM Derivation Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C172334", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C172335", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C158114", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C158115", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187456", - "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C187455", - "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204410", - "name": "CDISC ADaM Input Parameter Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C193278", - "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C193277", - "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81225", - "name": "CDISC ADaM Parameter Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C165644", - "name": "CDISC ADaM Pool for Integration Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C124296", - "name": "CDISC ADaM Subject Trial Status Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C81226", - "name": "CDISC ADaM Time Imputation Flag Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204414", - "name": "CDISC ADaM Tobacco Product Category Response Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204413", - "name": "CDISC ADaM Tobacco Product Use Status Response Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - }, - { - "code": "C204412", - "name": "CDISC ADaM Tobacco Use Transition Response Terminology", - "terminology": "ncit", - "version": "25.02d", - "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", - "conceptStatus": "DEFAULT", - "active": true - } - ] -} - +{ + "code": "C81222", + "name": "CDISC ADaM Terminology", + "terminology": "ncit", + "version": "25.07d", + "subsetLink": "https://evs.nci.nih.gov/ftp1/CDISC/ADaM", + "conceptStatus": "DEFAULT", + "leaf": false, + "active": true, + "synonyms": [ + { + "name": "ADaM", + "termType": "PT", + "type": "FULL_SYN", + "source": "CDISC" + }, + { + "name": "CDISC ADaM Terminology", + "termType": "PT", + "type": "FULL_SYN", + "source": "NCI" + }, + { + "name": "CDISC ADaM Terminology", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "The terminology subset that includes terms pertaining to the Clinical Data Interchange Standards Consortium (CDISC) Analysis Data Model (ADaM).", + "type": "ALT_DEFINITION", + "source": "CDISC" + }, + { + "definition": "The terminology subset that includes terms pertaining to the Clinical Data Interchange Standards Consortium (CDISC) Analysis Data Model (ADaM).", + "type": "DEFINITION", + "source": "NCI" + } + ], + "properties": [ + { + "code": "P322", + "type": "Contributing_Source", + "value": "CDISC" + }, + { + "code": "P366", + "type": "Legacy Concept Name", + "value": "CDISC_ADaM_Terminology" + }, + { + "code": "P372", + "type": "Publish_Value_Set", + "value": "Yes" + }, + { + "code": "P106", + "type": "Semantic_Type", + "value": "Intellectual Product" + }, + { + "code": "P376", + "type": "Term_Browser_Value_Set_Description", + "value": "

The terminology subset that includes terms pertaining to the Clinical Data Interchange Standards Consortium (CDISC) Analysis Data Model (ADaM).

The terminology can be downloaded at this location: CDISC ADaM Terminology.

" + }, + { + "code": "P207", + "type": "UMLS_CUI", + "value": "C2825525" + }, + { + "code": "P398", + "type": "Value_Set_Pair", + "value": "No" + } + ], + "children": [ + { + "code": "C208382", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C208381", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204411", + "name": "CDISC ADaM Analysis Stratum Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187458", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187457", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81223", + "name": "CDISC ADaM Date Imputation Flag Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81224", + "name": "CDISC ADaM Derivation Type Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172334", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172335", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C158114", + "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C158115", + "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187456", + "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187455", + "name": "CDISC ADaM Hamilton Depression Rating Scale - 17 Item Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204410", + "name": "CDISC ADaM Input Parameter Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C193278", + "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C193277", + "name": "CDISC ADaM National Early Warning Score 2 Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81225", + "name": "CDISC ADaM Parameter Type Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C165644", + "name": "CDISC ADaM Pool for Integration Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C124296", + "name": "CDISC ADaM Subject Trial Status Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81226", + "name": "CDISC ADaM Time Imputation Flag Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204414", + "name": "CDISC ADaM Tobacco Product Category Response Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204413", + "name": "CDISC ADaM Tobacco Product Use Status Response Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204412", + "name": "CDISC ADaM Tobacco Use Transition Response Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } + ] +} + diff --git a/curl-examples/samples/get-subset-members-by-code.txt b/curl-examples/samples/get-subset-members-by-code.txt index a89dc094..5b9ae180 100644 --- a/curl-examples/samples/get-subset-members-by-code.txt +++ b/curl-examples/samples/get-subset-members-by-code.txt @@ -1,93 +1,93 @@ -[ - { - "code": "C208382", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C208381", - "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C204411", - "name": "CDISC ADaM Analysis Stratum Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C187458", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C187457", - "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C81223", - "name": "CDISC ADaM Date Imputation Flag Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C81224", - "name": "CDISC ADaM Derivation Type Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C172334", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C172335", - "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - }, - { - "code": "C158114", - "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", - "terminology": "ncit", - "version": "25.02d", - "conceptStatus": "DEFAULT", - "leaf": true, - "active": true - } -] - +[ + { + "code": "C208382", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C208381", + "name": "CDISC ADaM Acute Physiology and Chronic Health Evaluation II Clinical Classification Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C204411", + "name": "CDISC ADaM Analysis Stratum Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187458", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C187457", + "name": "CDISC ADaM Craig Handicap Assessment and Reporting Technique-Short Form Questionnaires Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81223", + "name": "CDISC ADaM Date Imputation Flag Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C81224", + "name": "CDISC ADaM Derivation Type Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172334", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C172335", + "name": "CDISC ADaM Generalized Anxiety Disorder-7 Version 2 Questionnaire Parameter Name Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + }, + { + "code": "C158114", + "name": "CDISC ADaM Geriatric Depression Scale Short Form Questionnaire Parameter Code Terminology", + "terminology": "ncit", + "version": "25.07d", + "conceptStatus": "DEFAULT", + "leaf": true, + "active": true + } +] + diff --git a/curl-examples/samples/get-subtree-children.txt b/curl-examples/samples/get-subtree-children.txt index 728896d6..b10061ad 100644 --- a/curl-examples/samples/get-subtree-children.txt +++ b/curl-examples/samples/get-subtree-children.txt @@ -1,93 +1,98 @@ -[ - { - "code": "C3802", - "label": "Amelanotic Melanoma", - "leaf": false - }, - { - "code": "C8410", - "label": "Breast Melanoma", - "leaf": true - }, - { - "code": "C131506", - "label": "Childhood Melanoma", - "leaf": false - }, - { - "code": "C3510", - "label": "Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C4236", - "label": "Epithelioid Cell Melanoma", - "leaf": false - }, - { - "code": "C8925", - "label": "Metastatic Melanoma", - "leaf": false - }, - { - "code": "C66756", - "label": "Mixed Epithelioid and Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C205125", - "label": "Nodular Melanoma", - "leaf": false - }, - { - "code": "C8711", - "label": "Non-Cutaneous Melanoma", - "leaf": false - }, - { - "code": "C8562", - "label": "Ocular Melanoma", - "leaf": false - }, - { - "code": "C118828", - "label": "Orbital Melanoma", - "leaf": true - }, - { - "code": "C162547", - "label": "Penile Melanoma", - "leaf": false - }, - { - "code": "C7087", - "label": "Recurrent Melanoma", - "leaf": false - }, - { - "code": "C147983", - "label": "Refractory Melanoma", - "leaf": false - }, - { - "code": "C4228", - "label": "Regressing Melanoma", - "leaf": false - }, - { - "code": "C190239", - "label": "Resectable Melanoma", - "leaf": false - }, - { - "code": "C4237", - "label": "Spindle Cell Melanoma", - "leaf": false - }, - { - "code": "C148517", - "label": "Unresectable Melanoma", - "leaf": false - } -] - +[ + { + "code": "C3802", + "label": "Amelanotic Melanoma", + "leaf": false + }, + { + "code": "C8410", + "label": "Breast Melanoma", + "leaf": true + }, + { + "code": "C131506", + "label": "Childhood Melanoma", + "leaf": false + }, + { + "code": "C3510", + "label": "Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C4236", + "label": "Epithelioid Cell Melanoma", + "leaf": false + }, + { + "code": "C217198", + "label": "Localized Melanoma", + "leaf": false + }, + { + "code": "C215044", + "label": "Melanoma In Situ", + "leaf": false + }, + { + "code": "C8925", + "label": "Metastatic Melanoma", + "leaf": false + }, + { + "code": "C66756", + "label": "Mixed Epithelioid and Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C205125", + "label": "Nodular Melanoma", + "leaf": false + }, + { + "code": "C8711", + "label": "Non-Cutaneous Melanoma", + "leaf": false + }, + { + "code": "C118828", + "label": "Orbital Melanoma", + "leaf": true + }, + { + "code": "C162547", + "label": "Penile Melanoma", + "leaf": false + }, + { + "code": "C7087", + "label": "Recurrent Melanoma", + "leaf": false + }, + { + "code": "C147983", + "label": "Refractory Melanoma", + "leaf": false + }, + { + "code": "C4228", + "label": "Regressing Melanoma", + "leaf": false + }, + { + "code": "C190239", + "label": "Resectable Melanoma", + "leaf": false + }, + { + "code": "C4237", + "label": "Spindle Cell Melanoma", + "leaf": false + }, + { + "code": "C148517", + "label": "Unresectable Melanoma", + "leaf": false + } +] + diff --git a/curl-examples/samples/get-subtree.txt b/curl-examples/samples/get-subtree.txt index 65082ccc..9dd191f7 100644 --- a/curl-examples/samples/get-subtree.txt +++ b/curl-examples/samples/get-subtree.txt @@ -1,814 +1,819 @@ -[ - { - "code": "C12913", - "label": "Abnormal Cell", - "leaf": false - }, - { - "code": "C43431", - "label": "Activity", - "leaf": false - }, - { - "code": "C12219", - "label": "Anatomic Structure, System, or Substance", - "leaf": false - }, - { - "code": "C20633", - "label": "Biochemical Pathway", - "leaf": false - }, - { - "code": "C17828", - "label": "Biological Process", - "leaf": false - }, - { - "code": "C12218", - "label": "Chemotherapy Regimen or Agent Combination", - "leaf": false - }, - { - "code": "C20181", - "label": "Conceptual Entity", - "leaf": false - }, - { - "code": "C20047", - "label": "Diagnostic or Prognostic Factor", - "leaf": false - }, - { - "code": "C7057", - "label": "Disease, Disorder or Finding", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C2991", - "label": "Disease or Disorder", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C35470", - "label": "Behavioral Disorder", - "leaf": false - }, - { - "code": "C8278", - "label": "Cancer-Related Condition", - "leaf": false - }, - { - "code": "C27551", - "label": "Disorder by Site", - "leaf": false - }, - { - "code": "C3101", - "label": "Genetic Disorder", - "leaf": false - }, - { - "code": "C3262", - "label": "Neoplasm", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C4741", - "label": "Neoplasm by Morphology", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C3709", - "label": "Epithelial Neoplasm", - "leaf": false - }, - { - "code": "C3708", - "label": "Germ Cell Tumor", - "leaf": false - }, - { - "code": "C27134", - "label": "Hematopoietic and Lymphoid Cell Neoplasm", - "leaf": false - }, - { - "code": "C7058", - "label": "Melanocytic Neoplasm", - "leaf": false, - "expanded": true, - "children": [ - { - "code": "C4661", - "label": "Central Nervous System Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C208332", - "label": "Childhood Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C204977", - "label": "Conjunctival Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C7161", - "label": "Cutaneous Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C173488", - "label": "Head and Neck Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C9498", - "label": "Melanocytoma", - "leaf": false - }, - { - "code": "C3224", - "label": "Melanoma", - "leaf": false - }, - { - "code": "C7570", - "label": "Nevus", - "leaf": false - }, - { - "code": "C205057", - "label": "Uveal Melanocytic Neoplasm", - "leaf": false - }, - { - "code": "C40335", - "label": "Vulvar Melanocytic Neoplasm", - "leaf": false - } - ] - }, - { - "code": "C7059", - "label": "Mesenchymal Cell Neoplasm", - "leaf": false - }, - { - "code": "C3786", - "label": "Mesothelial Neoplasm", - "leaf": false - }, - { - "code": "C35562", - "label": "Neuroepithelial, Perineurial, and Schwann Cell Neoplasm", - "leaf": false - } - ] - }, - { - "code": "C3263", - "label": "Neoplasm by Site", - "leaf": 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"code": "C156711", + "label": "Malignant Peritoneal and Retroperitoneal Neoplasm", + "leaf": false + }, + { + "code": "C4571", + "label": "Malignant Respiratory System Neoplasm", + "leaf": false + }, + { + "code": "C2920", + "label": "Malignant Skin Neoplasm", + "leaf": false + }, + { + "code": "C4867", + "label": "Malignant Soft Tissue Neoplasm", + "leaf": false + }, + { + "code": "C132146", + "label": "Malignant Solid Neoplasm", + "leaf": false + }, + { + "code": "C6894", + "label": "Malignant Solitary Fibrous Tumor", + "leaf": false + }, + { + "code": "C3539", + "label": "Malignant Splenic Neoplasm", + "leaf": false + }, + { + "code": "C3576", + "label": "Malignant Thoracic Neoplasm", + "leaf": false + }, + { + "code": "C3224", + "label": "Melanoma", + "leaf": false + }, + { + "code": "C38156", + "label": "Metachronous Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36049", + "label": "Moderately Differentiated Malignant Neoplasm", + "leaf": false + }, + { + "code": "C3520", + "label": "Myeloid Sarcoma", + "leaf": false + }, + { + "code": "C84270", + "label": "Myeloid/Lymphoid Neoplasms with Eosinophilia and Tyrosine Kinase Gene Fusions", + "leaf": false + }, + { + "code": "C9226", + "label": "Non-Hematologic Malignancy", + "leaf": true + }, + { + "code": "C46080", + "label": "Nonestrogen-Dependent Malignant Neoplasm", + "leaf": true + }, + { + "code": "C167168", + "label": "Obesity-Related Malignant Neoplasm", + "leaf": true + }, + { + "code": "C4993", + "label": "Occupational Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36050", + "label": "Poorly Differentiated Malignant Neoplasm", + "leaf": false + }, + { + "code": "C7055", + "label": "Precursor Lymphoid Neoplasm", + "leaf": false + }, + { + "code": "C84509", + "label": "Primary Malignant Neoplasm", + "leaf": false + }, + { + "code": "C3716", + "label": "Primitive Neuroectodermal Tumor", + "leaf": false + }, + { + "code": "C172183", + "label": "Progesterone Receptor-Positive Malignant Neoplasm", + "leaf": false + }, + { + "code": "C27209", + "label": "Radiation-Related Malignant Neoplasm", + "leaf": false + }, + { + "code": "C4813", + "label": "Recurrent Malignant Neoplasm", + "leaf": false + }, + { + "code": "C120186", + "label": "Refractory Malignant Neoplasm", + "leaf": false + }, + { + "code": "C150602", + "label": "Resectable Malignant Neoplasm", + "leaf": false + }, + { + "code": "C9118", + "label": "Sarcoma", + "leaf": false + }, + { + "code": "C4968", + "label": "Secondary Malignant Neoplasm", + "leaf": false + }, + { + "code": "C201136", + "label": "Solid Pseudopapillary Neoplasm", + "leaf": false + }, + { + "code": "C177364", + "label": "Somatic-Type Malignancy", + "leaf": true + }, + { + "code": "C4969", + "label": "Therapy-Related Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36051", + "label": "Undifferentiated Malignant Neoplasm", + "leaf": true + }, + { + "code": "C27359", + "label": "Unresectable Malignant Neoplasm", + "leaf": false + }, + { + "code": "C36052", + "label": "Well Differentiated Malignant Neoplasm", + "leaf": false + } + ] + }, + { + "code": "C3261", + "label": "Metastatic Neoplasm", + "leaf": false + }, + { + "code": "C102883", + "label": "Miscellaneous Neoplasm", + "leaf": true + }, + { + "code": "C6930", + "label": "Mixed Neoplasm", + "leaf": false + }, + { + "code": "C36029", + "label": "Necrotic Neoplasm", + "leaf": true + }, + { + "code": "C27933", + "label": "Neoplasm by Cause", + "leaf": false + }, + { + "code": "C45230", + "label": "Neoplasm by Obsolete Classification", + "leaf": false + }, + { + "code": "C6974", + "label": "Neoplasm of Uncertain Histogenesis", + "leaf": true + }, + { + "code": "C3646", + "label": "Neoplasm of Uncertain Malignant Potential", + "leaf": false + }, + { + "code": "C65157", + "label": "Neoplasm, Uncertain Whether Benign or Malignant", + "leaf": true + }, + { + "code": "C7068", + "label": "Neoplastic Polyp", + "leaf": false + }, + { + "code": "C36012", + "label": "Nodular Neoplasm", + "leaf": true + }, + { + "code": "C36036", + "label": "Non-Encapsulated Neoplasm", + "leaf": true + }, + { + "code": "C163003", + "label": "Non-Malignant Neoplasm", + "leaf": true + }, + { + "code": "C36030", + "label": "Osteolytic Neoplasm", + "leaf": false + }, + { + "code": "C36031", + "label": "Papillary Neoplasm", + "leaf": false + }, + { + "code": "C36032", + "label": "Premalignant Neoplasm", + "leaf": true + }, + { + "code": "C8509", + "label": "Primary Neoplasm", + "leaf": false + }, + { + "code": "C7201", + "label": "Rare Neoplasm", + "leaf": false + }, + { + "code": "C4798", + "label": "Recurrent Neoplasm", + "leaf": false + }, + { + "code": "C7628", + "label": "Refractory Neoplasm", + "leaf": false + }, + { + "code": "C211531", + "label": "Resectable Neoplasm", + "leaf": false + }, + { + "code": "C36255", + "label": "Secondary Neoplasm", + "leaf": false + }, + { + "code": "C9292", + "label": "Solid Neoplasm", + "leaf": false + }, + { + "code": "C27263", + "label": "Spindle Cell Neoplasm", + "leaf": false + }, + { + "code": "C36033", + "label": "Tubular Neoplasm", + "leaf": true + } + ] + } + ] + }, + { + "code": "C53529", + "label": "Non-Neoplastic Disorder", + "leaf": false + }, + { + "code": "C89328", + "label": "Pediatric Disorder", + "leaf": false + }, + { + "code": "C3340", + "label": "Polyp", + "leaf": false + }, + { + "code": "C2893", + "label": "Psychiatric Disorder", + "leaf": false + }, + { + "code": "C26684", + "label": "Radiation-Induced Disorder", + "leaf": false + }, + { + "code": "C4873", + "label": "Rare Disorder", + "leaf": false + }, + { + "code": "C28193", + "label": "Syndrome", + "leaf": false + } + ] + }, + { + "code": "C3367", + "label": "Finding", + "leaf": false + } + ] + }, + { + "code": "C1908", + "label": "Drug, Food, Chemical or Biomedical Material", + "leaf": false + }, + { + "code": "C22188", + "label": "Experimental Organism Anatomical Concept", + "leaf": false + }, + { + "code": "C22187", + "label": "Experimental Organism Diagnosis", + "leaf": false + }, + { + "code": "C16612", + "label": "Gene", + "leaf": false + }, + { + "code": "C26548", + "label": "Gene Product", + "leaf": false + }, + { + "code": "C97325", + "label": "Manufactured Object", + "leaf": false + }, + { + "code": "C3910", + "label": "Molecular Abnormality", + "leaf": false + }, + { + "code": "C14250", + "label": "Organism", + "leaf": false + }, + { + "code": "C20189", + "label": "Property or Attribute", + "leaf": false + }, + { + "code": "C28428", + "label": "Retired Concept", + "leaf": false + } +] + diff --git a/curl-examples/samples/get-synonym-sources.txt b/curl-examples/samples/get-synonym-sources.txt index 316d79b9..75ff1128 100644 --- a/curl-examples/samples/get-synonym-sources.txt +++ b/curl-examples/samples/get-synonym-sources.txt @@ -1,356 +1,357 @@ -[ - { - "code": "ACC/AHA", - "name": "American College of Cardiology / American Heart Association", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BIOCARTA", - "name": "BioCarta online maps of molecular pathways, adapted for NCI use", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BRIDG", - "name": "Biomedical Research Integrated Domain Model Group", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BRIDG 3.0.3", - "name": "Biomedical Research Integrated Domain Model Group, version 3.0.3", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BRIDG 5.3", - "name": "Biomedical Research Integrated Domain Model Group, version 5.3", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CBDD", - "name": "Chemical Biology and Drug Development", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CCPS", - "name": "Childhood Cancer Predisposition Study", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CDC", - "name": "U.S. Centers for Disease Control and Prevention", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CDISC", - "name": "Clinical Data Interchange Standards Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CDISC-GLOSS", - "name": "CDISC Glossary Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CPTAC", - "name": "Clinical Proteomic Tumor Analysis Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CRCH", - "name": "Cancer Research Center of Hawaii Nutrition Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTCAE", - "name": "Common Terminology Criteria for Adverse Events", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTCAE 3.0", - "name": "Common Terminology Criteria for Adverse Events, version 3.0", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTCAE 5.0", - "name": "Common Terminology Criteria for Adverse Events, version 5.0", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTDC", - "name": "Clinical Trials Data Commons", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTEP", - "name": "Cancer Therapy Evaluation Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CTRP", - "name": "Clinical Trials Reporting Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CareLex", - "name": "CareLex electronic Trial Master File Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "Cellosaurus", - "name": "Cellosaurus - a knowledge resource on cell lines", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DCP", - "name": "NCI Division of Cancer Prevention Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DICOM", - "name": "Digital Imaging Communications in Medicine", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DIPG/DMG", - "name": "Diffuse Intrinsic Pontine Glioma/Diffuse Midline Glioma", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DTP", - "name": "NCI Developmental Therapeutics Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "EDQM-HC", - "name": "European Directorate for the Quality of Medicines & Healthcare", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "FDA", - "name": "U.S. Food and Drug Administration", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "GAIA", - "name": "Global Alignment of Immunization safety Assessment in pregnancy Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "GDC", - "name": "Genomic Data Commons", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "GENC", - "name": "Geopolitical Entities, Names, and Codes Terminology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HGNC", - "name": "HUGO Gene Nomenclature Committee", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HL7", - "name": "Health Level Seven International", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HemOnc", - "name": "HemOnc.org (A Free Hematology/Oncology Reference)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ICD-10", - "name": "International Classification of Diseases, Tenth Revision", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ICDC", - "name": "International Cancer Genome Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ICH", - "name": "International Conference on Harmonization", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "INC", - "name": "International Neonatal Consortium", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "JAX", - "name": "Jackson Laboratories Mouse Terminology, adapted for NCI use", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "KEGG", - "name": "KEGG Pathway Database", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "MRCT-Ctr", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NCI", - "name": "National Cancer Institute Thesaurus", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NCI-GLOSS", - "name": "NCI Dictionary of Cancer Terms", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NCPDP", - "name": "National Council for Prescription Drug Programs", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NDC", - "name": "National Drug Code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "NICHD", - "name": "National Institute of Child Health and Human Development", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "OORO", - "name": "Operational Ontology for Radiation Oncology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ORCHESTRA", - "name": "Multinational project funded by the European Commission to advance the knowledge of the SARS-CoV-2 infection and its long-term effects", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PCDC", - "name": "Pediatric Cancer Data Commons", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PI-RADS", - "name": "Prostate Imaging-Reporting and Data System", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PID", - "name": "NCI Nature Pathway Interaction Database", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PRO-CTCAE", - "name": "PRO-CTCAE (Patient Reported Outcomes version of Common Terminology Criteria for Adverse Events)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "RENI", - "name": "Registry Nomenclature Information System", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SEER", - "name": "Surveillance, Epidemiology, and End Results Program", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SeroNet", - "name": "NCI Serological Sciences Network for COVID-19", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "UBERON", - "name": "Uber-anatomy Ontology", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "UCUM", - "name": "Unified Code for Units of Measure", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "WHO", - "name": "World Health Organization", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "ZFin", - "name": "Zebrafish Information Network", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "caDSR", - "name": "Cancer Data Standards Registry and Repository", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "mCode", - "name": "Minimal Common Oncology Data Elements", - "terminology": "ncit", - "version": "25.02d" - } -] - +[ + { + "code": "ACC/AHA", + "name": "American College of Cardiology / American Heart Association", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BIOCARTA", + "name": "BioCarta online maps of molecular pathways, adapted for NCI use", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BRIDG", + "name": "Biomedical Research Integrated Domain Model Group", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BRIDG 3.0.3", + "name": "Biomedical Research Integrated Domain Model Group, version 3.0.3", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BRIDG 5.3", + "name": "Biomedical Research Integrated Domain Model Group, version 5.3", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CBDD", + "name": "Chemical Biology and Drug Development", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CCPS", + "name": "Childhood Cancer Predisposition Study", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CDC", + "name": "U.S. Centers for Disease Control and Prevention", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CDISC", + "name": "Clinical Data Interchange Standards Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CDISC-GLOSS", + "name": "CDISC Glossary Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CPTAC", + "name": "Clinical Proteomic Tumor Analysis Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CRCH", + "name": "Cancer Research Center of Hawaii Nutrition Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTCAE", + "name": "Common Terminology Criteria for Adverse Events", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTCAE 3.0", + "name": "Common Terminology Criteria for Adverse Events, version 3.0", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTCAE 5.0", + "name": "Common Terminology Criteria for Adverse Events, version 5.0", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTDC", + "name": "Clinical Trials Data Commons", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTEP", + "name": "Cancer Therapy Evaluation Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CTRP", + "name": "Clinical Trials Reporting Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CareLex", + "name": "CareLex electronic Trial Master File Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "Cellosaurus", + "name": "Cellosaurus - a knowledge resource on cell lines", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DCP", + "name": "NCI Division of Cancer Prevention Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DICOM", + "name": "Digital Imaging Communications in Medicine", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DIPG/DMG", + "name": "Diffuse Intrinsic Pontine Glioma/Diffuse Midline Glioma", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DTP", + "name": "NCI Developmental Therapeutics Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "EDQM-HC", + "name": "European Directorate for the Quality of Medicines & Healthcare", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "FDA", + "name": "U.S. Food and Drug Administration", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "GAIA", + "name": "Global Alignment of Immunization safety Assessment in pregnancy Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "GDC", + "name": "Genomic Data Commons", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "GENC", + "name": "Geopolitical Entities, Names, and Codes Terminology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HGNC", + "name": "HUGO Gene Nomenclature Committee", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HL7", + "name": "Health Level Seven International", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HemOnc", + "name": "HemOnc.org (A Free Hematology/Oncology Reference)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ICD-10", + "name": "International Classification of Diseases, Tenth Revision", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ICDC", + "name": "International Cancer Genome Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ICH", + "name": "International Conference on Harmonization", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "INC", + "name": "International Neonatal Consortium", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "JAX", + "name": "Jackson Laboratories Mouse Terminology, adapted for NCI use", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "KEGG", + "name": "KEGG Pathway Database", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "MRCT-Ctr", + "name": "MRCT Center Clinical Research Plain Language Glossary at Harvard and Brigham and Women's Hospital", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NCI", + "name": "National Cancer Institute Thesaurus", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NCI-GLOSS", + "name": "NCI Dictionary of Cancer Terms", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NCPDP", + "name": "National Council for Prescription Drug Programs", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NDC", + "name": "National Drug Code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "NICHD", + "name": "National Institute of Child Health and Human Development", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "OORO", + "name": "Operational Ontology for Radiation Oncology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ORCHESTRA", + "name": "Multinational project funded by the European Commission to advance the knowledge of the SARS-CoV-2 infection and its long-term effects", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PCDC", + "name": "Pediatric Cancer Data Commons", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PI-RADS", + "name": "Prostate Imaging-Reporting and Data System", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PID", + "name": "NCI Nature Pathway Interaction Database", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PRO-CTCAE", + "name": "PRO-CTCAE (Patient Reported Outcomes version of Common Terminology Criteria for Adverse Events)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "RENI", + "name": "Registry Nomenclature Information System", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SEER", + "name": "Surveillance, Epidemiology, and End Results Program", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SeroNet", + "name": "NCI Serological Sciences Network for COVID-19", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "UBERON", + "name": "Uber-anatomy Ontology", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "UCUM", + "name": "Unified Code for Units of Measure", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "WHO", + "name": "World Health Organization", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "ZFin", + "name": "Zebrafish Information Network", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "caDSR", + "name": "Cancer Data Standards Registry and Repository", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "mCode", + "name": "Minimal Common Oncology Data Elements", + "terminology": "ncit", + "version": "25.07d" + } +] + diff --git a/curl-examples/samples/get-synonym-type-by-code.txt b/curl-examples/samples/get-synonym-type-by-code.txt index f1f52fd3..b7ec3496 100644 --- a/curl-examples/samples/get-synonym-type-by-code.txt +++ b/curl-examples/samples/get-synonym-type-by-code.txt @@ -1,37 +1,37 @@ -{ - "code": "P90", - "name": "FULL_SYN", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Term & Source Data", - "type": "Display_Name" - }, - { - "name": "FULL_SYN", - "type": "FULL_SYN" - }, - { - "name": "Synonym with Source Data", - "type": "FULL_SYN" - }, - { - "name": "FULL_SYN", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] -} - +{ + "code": "P90", + "name": "FULL_SYN", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Term & Source Data", + "type": "Display_Name" + }, + { + "name": "FULL_SYN", + "type": "FULL_SYN" + }, + { + "name": "Synonym with Source Data", + "type": "FULL_SYN" + }, + { + "name": "FULL_SYN", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] +} + diff --git a/curl-examples/samples/get-synonym-types.txt b/curl-examples/samples/get-synonym-types.txt index e9867175..fdd086e3 100644 --- a/curl-examples/samples/get-synonym-types.txt +++ b/curl-examples/samples/get-synonym-types.txt @@ -1,115 +1,115 @@ -[ - { - "code": "P107", - "name": "Display_Name", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Display Name", - "type": "Display_Name" - }, - { - "name": "Display Name", - "type": "FULL_SYN" - }, - { - "name": "Display_Name", - "type": "FULL_SYN" - }, - { - "name": "Display_Name", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing an alternative Preferred Name for use in some NCI systems.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P108", - "name": "Preferred_Name", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Preferred Name", - "type": "Display_Name" - }, - { - "name": "Preferred Name", - "type": "FULL_SYN" - }, - { - "name": "Preferred Term", - "type": "FULL_SYN" - }, - { - "name": "Preferred_Name", - "type": "FULL_SYN" - }, - { - "name": "Preferred_Name", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing the word or phrase that NCI uses by preference to refer to the concept.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - }, - { - "code": "P90", - "name": "FULL_SYN", - "terminology": "ncit", - "version": "25.02d", - "synonyms": [ - { - "name": "Term & Source Data", - "type": "Display_Name" - }, - { - "name": "FULL_SYN", - "type": "FULL_SYN" - }, - { - "name": "Synonym with Source Data", - "type": "FULL_SYN" - }, - { - "name": "FULL_SYN", - "type": "Preferred_Name" - } - ], - "definitions": [ - { - "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", - "type": "DEFINITION" - } - ], - "properties": [ - { - "type": "Semantic_Type", - "value": "Conceptual Entity" - } - ] - } -] - +[ + { + "code": "P107", + "name": "Display_Name", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Display Name", + "type": "Display_Name" + }, + { + "name": "Display Name", + "type": "FULL_SYN" + }, + { + "name": "Display_Name", + "type": "FULL_SYN" + }, + { + "name": "Display_Name", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing an alternative Preferred Name for use in some NCI systems.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P108", + "name": "Preferred_Name", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Preferred Name", + "type": "Display_Name" + }, + { + "name": "Preferred Name", + "type": "FULL_SYN" + }, + { + "name": "Preferred Term", + "type": "FULL_SYN" + }, + { + "name": "Preferred_Name", + "type": "FULL_SYN" + }, + { + "name": "Preferred_Name", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing the word or phrase that NCI uses by preference to refer to the concept.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + }, + { + "code": "P90", + "name": "FULL_SYN", + "terminology": "ncit", + "version": "25.07d", + "synonyms": [ + { + "name": "Term & Source Data", + "type": "Display_Name" + }, + { + "name": "FULL_SYN", + "type": "FULL_SYN" + }, + { + "name": "Synonym with Source Data", + "type": "FULL_SYN" + }, + { + "name": "FULL_SYN", + "type": "Preferred_Name" + } + ], + "definitions": [ + { + "definition": "A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.", + "type": "DEFINITION" + } + ], + "properties": [ + { + "type": "Semantic_Type", + "value": "Conceptual Entity" + } + ] + } +] + diff --git a/curl-examples/samples/get-term-types.txt b/curl-examples/samples/get-term-types.txt index 1a5551a6..6be79261 100644 --- a/curl-examples/samples/get-term-types.txt +++ b/curl-examples/samples/get-term-types.txt @@ -1,123 +1,123 @@ -[ - { - "code": "AB", - "name": "Abbreviation", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "AD", - "name": "Adjectival form (and other parts of grammar)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "AQ", - "name": "*Antiquated preferred term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "AQS", - "name": "Antiquated term, use when there are antiquated synonyms within a concept", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "BR", - "name": "US brand name, which may be trademarked", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CA2", - "name": "ISO 3166 alpha-2 country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CA3", - "name": "ISO 3166 alpha-3 country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CI", - "name": "ISO country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CN", - "name": "Drug study code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CNU", - "name": "ISO 3166 numeric country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "CS", - "name": "US State Department country code", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "DN", - "name": "Display name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "FB", - "name": "Foreign brand name, which may be trademarked", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HD", - "name": "*Header (groups concepts, but not used for coding data)", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "HT", - "name": "Hierarchical term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "LLT", - "name": "Lower level term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "PT", - "name": "*Preferred term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "RT", - "name": "Related term", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SN", - "name": "Chemical structure name", - "terminology": "ncit", - "version": "25.02d" - }, - { - "code": "SY", - "name": "Synonym", - "terminology": "ncit", - "version": "25.02d" - } -] - +[ + { + "code": "AB", + "name": "Abbreviation", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "AD", + "name": "Adjectival form (and other parts of grammar)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "AQ", + "name": "*Antiquated preferred term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "AQS", + "name": "Antiquated term, use when there are antiquated synonyms within a concept", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "BR", + "name": "US brand name, which may be trademarked", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CA2", + "name": "ISO 3166 alpha-2 country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CA3", + "name": "ISO 3166 alpha-3 country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CI", + "name": "ISO country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CN", + "name": "Drug study code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CNU", + "name": "ISO 3166 numeric country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "CS", + "name": "US State Department country code", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "DN", + "name": "Display name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "FB", + "name": "Foreign brand name, which may be trademarked", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HD", + "name": "*Header (groups concepts, but not used for coding data)", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "HT", + "name": "Hierarchical term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "LLT", + "name": "Lower level term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "PT", + "name": "*Preferred term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "RT", + "name": "Related term", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SN", + "name": "Chemical structure name", + "terminology": "ncit", + "version": "25.07d" + }, + { + "code": "SY", + "name": "Synonym", + "terminology": "ncit", + "version": "25.07d" + } +] + diff --git a/curl-examples/samples/get-terminologies.txt b/curl-examples/samples/get-terminologies.txt index 2fa02256..24457e8e 100644 --- a/curl-examples/samples/get-terminologies.txt +++ b/curl-examples/samples/get-terminologies.txt @@ -1,44 +1,50 @@ -[ - { - "terminology": "ncit", - "version": "25.02d", - "date": "February 24, 2025", - "name": "NCI Thesaurus 25.02d", - "description": "NCI Thesaurus, a controlled vocabulary in support of NCI administrative and scientific activities. Produced by the Enterprise Vocabulary System (EVS), a project by the NCI Center for Biomedical Informatics and Information Technology. National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, U.S.A.", - "graph": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus25.02d.owl", - "terminologyVersion": "ncit_25.02d", - "latest": true, - "tags": { - "monthly": "true" - }, - "indexName": "concept_ncit_2502d", - "objectIndexName": "evs_object_ncit_2502d", - "metadata": { - "uiLabel": "NCI Thesaurus", - "maxVersions": 3, - "loader": "rdf", - "conceptStatuses": [ - "Obsolete_Concept", - "Header_Concept", - "Retired_Concept", - "Concept_Pending_Approval", - "Provisional_Concept" - ], - "retiredStatusValue": "Retired_Concept", - "detailsColumns": { - "synonyms-termType": true, - "synonyms-code": true, - "synonyms-subSource": true, - "synonyms-source": true, - "definitions-attribution": true, - "definitions-source": true - }, - "hierarchy": true, - "history": false, - "sourceCt": 74, - "subsetLink": "P374", - "codeLabel": "NCI Thesaurus Code" - } - } -] - +[ + { + "terminology": "ncit", + "version": "25.07d", + "date": "July 28, 2025", + "name": "NCI Thesaurus 25.07d", + "description": "NCI Thesaurus, a controlled vocabulary in support of NCI administrative and scientific activities. Produced by the Enterprise Vocabulary System (EVS), a project by the NCI Center for Biomedical Informatics and Information Technology. National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, U.S.A.", + "graph": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus_25.07d.owl", + "terminologyVersion": "ncit_25.07d", + "latest": true, + "tags": { + "monthly": "true" + }, + "indexName": "concept_ncit_2507d", + "objectIndexName": "evs_object_ncit_2507d", + "metadata": { + "uiLabel": "NCI Thesaurus", + "maxVersions": 3, + "loader": "rdf", + "conceptStatuses": [ + "Obsolete_Concept", + "Header_Concept", + "Retired_Concept", + "Provisional_Concept", + "Concept_Pending_Approval" + ], + "retiredStatusValue": "Retired_Concept", + "detailsColumns": { + "synonyms-termType": true, + "synonyms-code": true, + "synonyms-subSource": true, + "synonyms-source": true, + "definitions-attribution": true, + "definitions-source": true + }, + "hierarchy": true, + "history": false, + "sourceCt": 74, + "subsetLink": "P374", + "codeLabel": "NCI Thesaurus Code", + "extraSubsets": { + "C6283": "C143048", + "C190573": "C6283", + "C4005": "C6283" + }, + "historyVersion": "25.07d" + } + } +] + diff --git a/doc/FAQ.md b/doc/FAQ.md index da5b8176..28250bdb 100644 --- a/doc/FAQ.md +++ b/doc/FAQ.md @@ -1,19 +1,31 @@ -# Frequently Asked Questions - -### General Questions - -* **What is EVS REST API?** - An open-source REST API-based service for accessing standard healthcare terminologies relevant for cancer research. It combines products produced by the National Cancer Institute (NCI) such as NCI Thesaurus and NCI Methathesaurus, as well as content from other providers producing code systems relevant for clinical care and cancer research. - -* **What is EVS Explore?** - A web-based user interface for the EVS REST API allowing users to interact with standard healthcare terminology content through a web browser. - -[Back to Top](#frequently-asked-questions) - -### Questions about NCI Thesaurus - -* **How often is NCI Thesaurus updated?** - NCI Thesaurus is officially published on a monthly basis on the last non-holiday Monday of each month. Data is processed and included in EVS REST API generally within the same week as files are published. - -[Back to Top](#frequently-asked-questions) - +# Frequently Asked Questions + +### General Questions + +* **What is EVS REST API?** + An open-source REST API-based service for accessing standard healthcare terminologies relevant for cancer research. It combines products produced by the National Cancer Institute (NCI) such as NCI Thesaurus and NCI Methathesaurus, as well as content from other providers producing code systems relevant for clinical care and cancer research. + +* **What is EVS Explore?** + A web-based user interface for the EVS REST API allowing users to interact with standard healthcare terminology content through a web browser. + +[Back to Top](#frequently-asked-questions) + +### Questions about NCI Thesaurus + +* **How often is NCI Thesaurus updated?** + NCI Thesaurus is officially published on a monthly basis on the last non-holiday Monday of each month. Data is processed and included in EVS REST API generally within the same week as files are published. + +* **How can concepts matching a particular Semantic Type be found by the API?** + This is handled by using "Search endpoint" of the EVS REST API to find concepts for a specific terminology and leverage the "property" and "value" parameters to specify a "Semantic_Type" property with a particular value, such as "Neoplastic Process". The "fromRecord" and "pageSize" parameters can be used to read more than the first ten results. This curl call represents a way to find NCI Thesaurus codes with Semantic_Type properties equal to "Neoplastic Process": + +``` +curl -X 'GET' \ + 'https://api-evsrest.nci.nih.gov/api/v1/concept/ncit/search?fromRecord=0&pageSize=10&property=Semantic_Type&value=Neoplastic%20Process' \ + -H 'accept: application/json' +``` + +NOTE: it is not currently possible to search by properties within EVS Explore. However a future edition will enable an "advanced search" mechanism to support this behavior. + + +[Back to Top](#frequently-asked-questions) + diff --git a/doc/FHIRVALUESET.md b/doc/FHIRVALUESET.md new file mode 100644 index 00000000..fbb06233 --- /dev/null +++ b/doc/FHIRVALUESET.md @@ -0,0 +1,1065 @@ +# Using FHIR ValueSet $expand in EVSRESTAPI + +ValueSets can be requested with a POST call defining a .compose definition. This definition indicates which codes are intended to be in the returned expanded set. + +ValueSets with the $expand operation are documented at https://hl7.org/fhir/R5/valueset-operation-expand.html. +Definitions using filter operators are documented at https://hl7.org/fhir/R5/valueset-filter-operator.html. + +NOTE: Most of the functionality will work for R4 as it does for R5. Exceptions are noted below. + +## ValueSet expand with parameter and filter operations + +Supported ValueSet $expand parameters are: + +1. valueSetVersion +2. filter +3. offset +4. count +5. includeDesignations +6. includeDefinition +7. activeOnly +8. property (R5 only) + +Supported operations on a compose:include:filter with property 'concept' are: + +1. [is-a](#valueset-expand-with-is-a-filter-operation) +2. [descendent-of](#valueset-expand-with-descendent-of-filter-operation) +3. [child-of](#valueset-expand-with-child-of-filter-operation-r5-only) (R5 only) +4. [generalizes](#valueset-expand-with-generalizes-filter-operation) +5. [descendent-leaf](#valueset-expand-with-descendent-leaf-filter-operation-r5-only) (R5 only) +6. [in](#valueset-expand-with-in-filter-operation) +7. [is-not-a](#valueset-expand-with-is-not-a-filter-operation) +8. [not-in](#valueset-expand-with-not-in-filter-operation) + +Supported property operations on a compose:include:filter are: +1. = +2. exists (value=true or value=false) + +ValueSets in the compose definition +1. [ValueSet expand with include.valueSet and exclude.valueSet operations](#valueset-expand-with-includevalueset-and-excludevalueset-operations) +2. [ValueSet expand with _sort parameter](#valueset-expand-with-_sort-parameter) + +## ValueSet expand requests via curl calls + +Use an API_URL setting like the one below. + +`export API_URL=https://api-evsrest.nci.nih.gov` + +### ValueSet expand with definitions and designations + +This request is appropriate for NCI Thesaurus and finds the included concepts with their definitions and designations. + +The expected result will include the C14225 (Human) concept with its complete definition text, all synonym designations (PT, SY, etc.), and term type information, providing comprehensive concept details beyond just the basic code and display name. +``` +cat << EOF > parameters.txt +{ + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-filter-test", + "version": "1.0.0", + "name": "NCIGeneralizesFilterTest", + "title": "NCI Thesaurus Filter Test", + "status": "active", + "description": "Test ValueSet expand with definitions and designations requested.", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C14225", + "display": "Human" + } + ] + } + ] + } + } + }, + { + "name": "includeDefinition", + "valueBoolean": true + }, + { + "name": "includeDesignations", + "valueBoolean": true + } + ] +} +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +``` +### ValueSet expand with 'is-a' filter operation + + This request is appropriate for NCI Thesaurus and finds the concept Lyase Gene and all of its descendants (children, grandchildren, etc.). + +The expected result will include C21282 (Lyase Gene) itself plus all its hierarchical descendants in the NCI Thesaurus, such as specific lyase gene types like ADCY5 Gene, PLCG1 Gene, and other enzyme genes classified under the Lyase Gene category. +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-is-a-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-is-a-filter-test", + "version": "1.0.0", + "name": "NCIIsAFilterTest", + "title": "NCI Thesaurus Is-A Filter Test", + "status": "active", + "description": "Test ValueSet with 'is-a' filter for Lyase Gene and its descendants", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "filter": [ + { + "property": "concept", + "op": "is-a", + "value": "C21282" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + + ``` + +### ValueSet expand with 'descendent-of' filter operation + + This request is appropriate for NCI Thesaurus and finds all descendants of Gene (excluding the Gene concept itself). + + The expected result will include all gene subtypes like Lyase Gene, Enzyme Gene, ADCY5 Gene, etc., but will exclude C16612 (Gene) itself, returning only the hierarchical children and grandchildren concepts with count limited to 20 as specified in the request. +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-descendent-of-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-descendent-of-filter-test", + "version": "1.0.0", + "name": "NCIDescendentOfFilterTest", + "title": "NCI Thesaurus Descendent-Of Filter Test", + "status": "active", + "description": "Test ValueSet with 'descendent-of' filter for all descendants of Gene", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "filter": [ + { + "property": "concept", + "op": "descendent-of", + "value": "C16612" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + }, + { + "name": "count", + "valueInteger": 20 + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +``` + +### ValueSet expand with 'child-of' filter operation (R5 only) + +This request is appropriate for NCI Thesaurus and finds the children of Lyase Gene. + +The expected result will include only the direct child concepts of C21282 (Lyase Gene), such as specific lyase enzyme subtypes, but will not include grandchildren or deeper descendants, providing a single-level hierarchical expansion. + +``` +cat << EOF > parameters.txt +{ + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-child-of-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-child-of-filter-test", + "version": "1.0.0", + "name": "NCIChildOfFilterTest", + "title": "NCI Thesaurus Child-Of Filter Test", + "status": "active", + "description": "Test ValueSet with child-of filter for Lyase Gene", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "filter": [ + { + "property": "concept", + "op": "child-of", + "value": "C21282" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] +} +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + + +``` + +### ValueSet expand with 'generalizes' filter operation + +This request is appropriate for NCI Thesaurus and finds ancestors of ADCY5 Gene, adds the Human concept and excludes the concept Enzyme Gene. + +The expected result will include the ancestral hierarchy of C213888 (ADCY5 Gene) such as Gene, Lyase Gene, plus the directly included C14225 (Human) concept, but will exclude C21281 (Enzyme Gene) from the final result set, demonstrating the combination of filter-based inclusion, direct inclusion, and exclusion operations. +``` +cat << EOF > parameters.txt +{ + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-generalizes-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-generalizes-filter-test", + "version": "1.0.0", + "name": "NCIGeneralizesFilterTest", + "title": "NCI Thesaurus Generalizes Filter Test", + "status": "active", + "description": "Test ValueSet with 'generalizes' filter for ADCY5 Gene ancestors plus direct includes and excludes", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "filter": [ + { + "property": "concept", + "op": "generalizes", + "value": "C21282" + } + ] + }, + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C14225", + "display": "Human" + } + ] + } + ], + "exclude": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C16612", + "display": "Gene" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] +} +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +``` + +### ValueSet expand with 'descendent-leaf' filter operation (R5 only) + +This request is appropriate for NCI Thesaurus and finds the leaf node descendents of Lyase Gene. + +The expected result will include only the terminal/leaf concepts under C21282 (Lyase Gene) that have no further children in the hierarchy, plus the directly included C16612 (Gene) concept, providing the most specific enzyme gene concepts without intermediate classification levels. +``` +cat << EOF > parameters.txt +{ + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { +"resourceType": "ValueSet", + "id": "nci-descendant-leaf-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-descendant-leaf-filter-test", + "version": "1.0.0", + "name": "NCIDescendantLeafFilterTest", + "title": "NCI Thesaurus Descendant-Leaf Filter Test", + "status": "active", + "description": "Test ValueSet with descendant-leaf filter for Lyase Gene leaf descendants plus direct includes and excludes", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "filter": [ + { + "property": "concept", + "op": "descendent-leaf", + "value": "C21282" + } + ] + }, + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C16612", + "display": "Gene" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] +} +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + + + +``` + + +### ValueSet expand with 'in' filter operation + +This request is appropriate for NCI Thesaurus and expands the concepts provided in the filter 'in' listing as well as the direct includes concept. + +The expected result will include exactly C21282 (Lyase Gene), C3262 (Neoplasm), and C2991 (Disease or Disorder) from the filter list, plus the directly included C2991 (Disease or Disorder) concept, with C2991 appearing only once due to deduplication. +``` +cat << EOF > parameters.txt +{ + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-in-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-in-filter-test", + "version": "1.0.0", + "name": "NCIInFilterTest", + "title": "NCI Thesaurus In Filter Test", + "status": "active", + "description": "Test ValueSet with 'in' filter for concepts in a specific 'in' listing plus direct includes", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "filter": [ + { + "property": "concept", + "op": "in", + "value": "C21282,C3262,C2991" + } + ] + }, + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C2991", + "display": "Disease or Disorder" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] +} +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +``` + ### ValueSet expand with 'is-not-a' filter operation + + This request is appropriate for NCI Thesaurus and excludes concepts that have an is-a relationship with the specified concept, keeping only those that are not descendants of the target concept. + +The expected result will include C48672 (Schedule I Substance), C2991 (Disease or Disorder), and C48670 (Controlled Substance), while excluding C21282 (Lyase Gene) and C16612 (Gene) since they have an is-a relationship with Gene (C16612). + +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-is-not-a-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-is-not-a-filter-test", + "version": "1.0.0", + "name": "NCIIsNotAFilterTest", + "title": "NCI Thesaurus Is-Not-A Filter Test", + "status": "active", + "description": "Test ValueSet with 'is-not-a' filter to exclude gene concepts", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C21282", + "display": "Lyase Gene" + }, + { + "code": "C16612", + "display": "Gene" + }, + { + "code": "C48672", + "display": "Schedule I Substance" + }, + { + "code": "C2991", + "display": "Disease or Disorder" + }, + { + "code": "C48670", + "display": "Controlled Substance" + } + ], + "filter": [ + { + "property": "concept", + "op": "is-not-a", + "value": "C16612" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +``` + + + ### ValueSet expand with 'not-in' filter operation + + This request is appropriate for NCI Thesaurus and excludes specific concepts from the included list, keeping only those not specified in the filter value. + + The expected result will include only C48670 (Controlled Substance) and C16612 (Gene), while excluding C2991 (Disease or Disorder) and C48672 (Schedule I Substance) as specified in the filter value. +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-not-in-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-not-in-filter-test", + "version": "1.0.0", + "name": "NCINotInFilterTest", + "title": "NCI Thesaurus Not-In Filter Test", + "status": "active", + "description": "Test ValueSet with 'not-in' filter to exclude specific concepts", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C48670", + "display": "Controlled Substance" + }, + { + "code": "C2991", + "display": "Disease or Disorder" + }, + { + "code": "C48672", + "display": "Schedule I Substance" + }, + { + "code": "C16612", + "display": "Gene" + } + ], + "filter": [ + { + "property": "concept", + "op": "not-in", + "value": "C2991,C48672" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +``` + ### ValueSet expand with property '=' filter operation + + This request is appropriate for NCI Thesaurus and finds concepts from the included list that have the Contributing_Source property equal to "FDA". + + The expected result will include only C48672 (Schedule I Substance) from the concept list, as it has the Contributing_Source property with value "FDA", while C2991 (Disease or Disorder) and C48670 (Controlled Substance) will be excluded because they either lack this property or have different Contributing_Source values. +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-property-equals-filter-test", + "url": "http://example.org/fhir/ValueSet/nci-property-equals-filter-test", + "version": "1.0.0", + "name": "NCIPropertyEqualsFilterTest", + "title": "NCI Thesaurus Property Equals Filter Test", + "status": "active", + "description": "Test ValueSet with '=' filter for Contributing_Source property", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C48672", + "display": "Schedule I Substance" + }, + { + "code": "C2991", + "display": "Disease or Disorder" + }, + { + "code": "C48670", + "display": "Controlled Substance" + } + ], + "filter": [ + { + "property": "Contributing_Source", + "op": "=", + "value": "FDA" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +``` + ### ValueSet expand with property 'exists' filter operation (value=true) + + This request is appropriate for NCI Thesaurus and finds concepts from the included list that have the Contributing_Source property (regardless of its value). + + The expected result will include C48672 (Schedule I Substance) and C2991 (Disease or Disorder) which both have Contributing_Source properties with various values, while excluding C48670 (Controlled Substance) and C21282 (Lyase Gene) which do not have any Contributing_Source property. +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-property-exists-true-test", + "url": "http://example.org/fhir/ValueSet/nci-property-exists-true-test", + "version": "1.0.0", + "name": "NCIPropertyExistsTrueTest", + "title": "NCI Thesaurus Property Exists True Filter Test", + "status": "active", + "description": "Test ValueSet with 'exists' filter for Contributing_Source property (value=true)", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C48672", + "display": "Schedule I Substance" + }, + { + "code": "C2991", + "display": "Disease or Disorder" + }, + { + "code": "C48670", + "display": "Controlled Substance" + }, + { + "code": "C21282", + "display": "Lyase Gene" + } + ], + "filter": [ + { + "property": "Contributing_Source", + "op": "exists", + "value": "true" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' +``` + + ### ValueSet expand with property 'exists' filter operation (value=false) + + This request is appropriate for NCI Thesaurus and finds concepts from the included list that do NOT have the Contributing_Source property. + +The expected result will include C48670 (Controlled Substance) and C21282 (Lyase Gene) which lack the Contributing_Source property, while excluding C48672 + (Schedule I Substance) and C2991 (Disease or Disorder) which do have Contributing_Source properties with various values. +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-property-exists-false-test", + "url": "http://example.org/fhir/ValueSet/nci-property-exists-false-test", + "version": "1.0.0", + "name": "NCIPropertyExistsFalseTest", + "title": "NCI Thesaurus Property Exists False Filter Test", + "status": "active", + "description": "Test ValueSet with 'exists' filter for Contributing_Source property (value=false)", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "concept": [ + { + "code": "C48672", + "display": "Schedule I Substance" + }, + { + "code": "C2991", + "display": "Disease or Disorder" + }, + { + "code": "C48670", + "display": "Controlled Substance" + }, + { + "code": "C21282", + "display": "Lyase Gene" + } + ], + "filter": [ + { + "property": "Contributing_Source", + "op": "exists", + "value": "false" + } + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' +``` +### ValueSet expand with include.valueSet and exclude.valueSet operations + + The FHIR ValueSet compose definition supports referencing other ValueSets through include.valueSet and exclude.valueSet elements. This enables composition of ValueSets from existing + ValueSet definitions. + + +### ValueSet expand with include.valueSet and paging + + This request demonstrates paging functionality with include.valueSet, retrieving the first 50 concepts from the referenced ValueSet. + + The expected result will include the first 50 concepts from the C54452 subset with proper expansion metadata showing the offset, count, and total number of available concepts, enabling + efficient pagination through large ValueSet expansions. + +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-include-valueset-paging-test", + "url": "http://example.org/fhir/ValueSet/nci-include-valueset-paging-test", + "version": "1.0.0", + "name": "NCIIncludeValueSetPagingTest", + "title": "NCI Thesaurus Include ValueSet Paging Test", + "status": "active", + "description": "Test ValueSet with include.valueSet paging functionality", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "valueSet": [ + "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl?fhir_vs=C54452" + ] + } + ] + } + } + }, + { + "name": "offset", + "valueInteger": 0 + }, + { + "name": "count", + "valueInteger": 50 + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' +``` + + ### ValueSet expand with include.valueSet and exclude.valueSet + + This request demonstrates combining include.valueSet and exclude.valueSet operations, including all concepts from C54452 and excluding overlapping concepts from C54459. + + The expected result will include all concepts from the C54452 subset but remove any concepts that also exist in the C54459 subset, demonstrating set subtraction behavior where the total count should decrease by exactly 5 concepts due to the overlap between these two ValueSets. + +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-include-exclude-valueset-test", + "url": "http://example.org/fhir/ValueSet/nci-include-exclude-valueset-test", + "version": "1.0.0", + "name": "NCIIncludeExcludeValueSetTest", + "title": "NCI Thesaurus Include and Exclude ValueSet Test", + "status": "active", + "description": "Test ValueSet with include C54452 and exclude C54459 ValueSets", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "valueSet": [ + "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl?fhir_vs=C54452" + ] + } + ], + "exclude": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "valueSet": [ + "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl?fhir_vs=C54459" + ] + } + ] + } + } + }, + { + "name": "activeOnly", + "valueBoolean": true + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' +``` + ### ValueSet expand with _sort parameter + + This request demonstrates sorting functionality in ValueSet expansion, allowing results to be ordered by display name or code. + + The expected result will include concepts from the C54459 subset sorted alphabetically by their display names in ascending order, with proper expansion metadata and pagination support for large sorted result sets. +``` + cat << EOF > parameters.txt + { + "resourceType": "Parameters", + "parameter": [ + { + "name": "valueSet", + "resource": { + "resourceType": "ValueSet", + "id": "nci-sort-display-test", + "url": "http://example.org/fhir/ValueSet/nci-sort-display-test", + "version": "1.0.0", + "name": "NCISortDisplayTest", + "title": "NCI Thesaurus Sort by Display Test", + "status": "active", + "description": "Test ValueSet with _sort parameter for sorting by display name", + "compose": { + "include": [ + { + "system": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl", + "valueSet": [ + "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl?fhir_vs=C54459" + ] + } + ] + } + } + }, + { + "name": "_sort", + "valueString": "display" + }, + { + "name": "count", + "valueInteger": 20 + } + ] + } +EOF + +# For R5 use this curl call +curl -X POST "$API_URL/fhir/r5/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' + +# For R4 use this curl call +curl -X POST "$API_URL/fhir/r4/ValueSet/\$expand" \ + -H 'accept: application/fhir+json' \ + -H 'Content-Type: application/fhir+json' \ + -d "@parameters.txt" | jq '.' +``` +[Back to Top](#using-fhir-valueset-expand-in-evsrestapi) diff --git a/fhir-examples/EVSRESTAPI-FHIR-R4.postman_collection.json b/fhir-examples/EVSRESTAPI-FHIR-R4.postman_collection.json index 25ad66d9..20f3612f 100644 --- a/fhir-examples/EVSRESTAPI-FHIR-R4.postman_collection.json +++ b/fhir-examples/EVSRESTAPI-FHIR-R4.postman_collection.json @@ -1,10 +1,10 @@ { "info": { - "_postman_id": "9117dbcf-5825-4093-94fe-4496b330507f", + "_postman_id": "747adee5-918d-442c-80b5-b9d41e36f455", "name": "EVSRESTAPI FHIR R4", "description": "EVSRESTAPI FHIR Terminology Services API, [https://api-evsrest.nci.nih.gov/fhir/r4/swagger-ui/](https://api-evsrest.nci.nih.gov/fhir/r4/swagger-ui/).", "schema": "https://schema.getpostman.com/json/collection/v2.1.0/collection.json", - "_exporter_id": "7218027" + "_exporter_id": "11076096" }, "item": [ { @@ -143,6 +143,11 @@ "key": "_offset", "value": "0", "disabled": true + }, + { + "key": "_sort", + "value": "name", + "disabled": true } ] } @@ -457,6 +462,11 @@ "key": "_offset", "value": "0", "disabled": true + }, + { + "key": "_sort", + "value": "name", + "disabled": true } ] }, @@ -729,6 +739,11 @@ "key": "_offset", "value": "0", "disabled": true + }, + { + "key": "_sort", + "value": "name", + "disabled": true } ] } diff --git a/fhir-examples/EVSRESTAPI-FHIR-R5.postman_collection.json b/fhir-examples/EVSRESTAPI-FHIR-R5.postman_collection.json index 655eff81..b2582c5e 100644 --- a/fhir-examples/EVSRESTAPI-FHIR-R5.postman_collection.json +++ b/fhir-examples/EVSRESTAPI-FHIR-R5.postman_collection.json @@ -1,10 +1,10 @@ { "info": { - "_postman_id": "5ed550b1-71f3-419c-9a47-f0254002da3c", + "_postman_id": "0137f386-dd36-4fc3-aa90-ed15e8aebc41", "name": "EVSRESTAPI FHIR R5", "description": "EVSRESTAPI FHIR Terminology Services API, [https://api-evsrest.nci.nih.gov/fhir/r5/swagger-ui/](https://api-evsrest.nci.nih.gov/fhir/r5/swagger-ui/).", "schema": "https://schema.getpostman.com/json/collection/v2.1.0/collection.json", - "_exporter_id": "7218027" + "_exporter_id": "11076096" }, "item": [ { @@ -143,6 +143,11 @@ "key": "_offset", "value": "0", "disabled": true + }, + { + "key": "_sort", + "value": "name", + "disabled": true } ] } @@ -457,6 +462,11 @@ "key": "_offset", "value": "0", "disabled": true + }, + { + "key": "_sort", + "value": "name", + "disabled": true } ] }, @@ -729,6 +739,11 @@ "key": "_offset", "value": "0", "disabled": true + }, + { + "key": "_sort", + "value": "name", + "disabled": true } ] } diff --git a/fhir-examples/README.md b/fhir-examples/README.md index 4ac5a83f..f22f8979 100644 --- a/fhir-examples/README.md +++ b/fhir-examples/README.md @@ -19,6 +19,24 @@ FHIR Swagger APIs are also available for these end points. - +## Running the Postman FHIR Script + +A convenience script is included to help run the FHIR Postman collection using Newman. + +- Script: `postman_fhir.sh` (located in this directory) +- Usage: + ```bash + cd fhir-examples + ./postman_fhir.sh R4 + ``` + Replace `R4` with `R5` to run the R5 collection. +- To override the default API URL (the script uses a production default), set the environment variable `API_URL` and then run the script: + ```bash + export API_URL=https://api-test-evsrest.nci.nih.gov + ./postman_fhir.sh R4 + ``` +- Requirements: `newman` (npm). The script will attempt to install `newman` if it is not found. + ## Sample FHIR Calls Once loaded in, you will see the calls divided into four sections diff --git a/fhir-examples/postman_fhir.sh b/fhir-examples/postman_fhir.sh new file mode 100644 index 00000000..011ee25b --- /dev/null +++ b/fhir-examples/postman_fhir.sh @@ -0,0 +1,76 @@ +#!/bin/bash + +# Bash script to run a Postman collection with a dynamically calculated API_URL + +# TODO: Calculate or fetch the API_URL +# Replace this local URL with the actual method to determine API_URL. +# API_URL="http://localhost:8082/api/v1" # local URL; update as needed. +API_URL="https://api-evsrest.nci.nih.gov" # Prod API_URL +# API_URL="https://api-test-evsrest.nci.nih.gov" # Test API_URL +# API_URL="https://api-qa-evsrest.nci.nih.gov" # QA API_URL + +# Ensure API_URL is set in the environment +if [ -z "$API_URL" ]; then + echo "Error: API_URL is not set. Please export API_URL before running this script." + exit 1 +fi + +# Determine FHIR version from argument (exit and complain if not specified or not R4/R5) +if [ $# -lt 1 ]; then + echo "Error: No FHIR version specified. Please provide FHIR version as 'R4' or 'R5'." + exit 1 +fi +# Get the FHIR version from the first argument, capitalize to support r4/r5 +FHIR_VERSION=$(echo "$1" | tr '[:lower:]' '[:upper:]') +if [ "$FHIR_VERSION" != "R4" ] && [ "$FHIR_VERSION" != "R5" ]; then + echo "Error: Invalid FHIR version specified. Please provide 'R4' or 'R5'." + exit 1 +fi + +# Check if we want R4 or R5 +if [ "$FHIR_VERSION" == "R5" ]; then + COLLECTION_FILE="EVSRESTAPI-FHIR-R5.postman_collection.json" +elif [ "$FHIR_VERSION" == "R4" ]; then + COLLECTION_FILE="EVSRESTAPI-FHIR-R4.postman_collection.json" +fi + +# Check if the collection file exists +if [ ! -f "$COLLECTION_FILE" ]; then + echo "Warning: Collection file '$COLLECTION_FILE' does not exist." + exit 0 +fi + +# Verify if newman is installed +if ! command -v newman &> /dev/null; then + echo "Newman is not installed. Attempting to install it locally..." + # Try installing Newman globally + # Newman site suggests global install over local + npm install -g newman + if [ $? -ne 0 ]; then + echo "Error: Newman installation failed. Please install it manually." + exit 1 + fi + + # Verify if Newman is installed correctly + if ! command -v newman &> /dev/null; then + echo "Error: Newman is still not recognized after installation." + echo "Please try installing it manually using the following command:" + echo "npm install -g newman" + exit 1 + fi +fi + +# Run the Postman collection using newman and track the exit status +echo "Running the Postman collection with API_URL=$API_URL..." + +newman run "$COLLECTION_FILE" --global-var "API_URL=$API_URL" +newman_status=$? + +# Check if newman run succeeded +if [ $newman_status -eq 0 ]; then + echo "Postman collection ran successfully." + exit 0 +else + echo "Error: Postman collection failed with status code $newman_status." + exit $newman_status +fi diff --git a/java-examples/README.md b/java-examples/README.md index fc87cc57..8dfe0fe9 100644 --- a/java-examples/README.md +++ b/java-examples/README.md @@ -16,13 +16,28 @@ Building the java-examples should be as simple as running the following command this directory. ``` -./gradlew clean build +./gradlew clean build -x test ``` This will invoke Gradle to build the model objects and the clients themselves and then will also run the unit tests which demonstrate use of the client to make actual API calls against EVSRESTAPI. +## Running the README Gradle test runner (java_check.py) + +This directory includes a helper script that scans this `README.md` for `./gradlew` commands (the sample commands shown) and executes them to capture output into the `samples/` directory. + +- Script: `java_check.py` (located in this directory) +- Usage: + ```bash + cd java-examples + python java_check.py + ``` +- Requirements: + - Java must be installed and accessible (e.g. `java --version`). + - Gradle wrapper `./gradlew` must be executable from this directory (as the script runs gradle commands parsed from the README). +- Output: The script will execute the `./gradlew test` commands found in the README and update files in the `samples/` directory with collected outputs; it also reports which commands succeeded or failed. + ## Sample Java Calls The following examples are exhibited by various unit tests defined in the code in @@ -35,6 +50,17 @@ The following examples are exhibited by various unit tests defined in the code i * [Get concept by code (full information)](#get-concept-by-code-full-information) * [Get concept by code (custom include)](#get-concept-by-code-custom-information) * [Get concept part](#get-concept-part) +* [Get association entries for code/label](#get-association-entries-for-codelabel) +* [Get associations for code](#get-associations-for-code) +* [Get "disjoint with" info for code](#get-disjoint-with) +* [Get history for code](#get-history-for-code) +* [Get inverse associations for code](#get-inverse-associations) +* [Get inverse roles for code](#get-inverse-roles) +* [Get maps for code](#get-maps-for-code) +* [Get parents for code](#get-parents) +* [Get roles for code](#get-roles-for-code) +* [Get subset members for code](#get-subset-members-for-code) +* [Get subtree children for code](#get-subtree-children-for-code) * [Get concept descendants](#get-descendants) * [Get all properties](#get-all-properties) * [Get property by code (or label)](#get-property-by-code-or-label) @@ -44,6 +70,7 @@ The following examples are exhibited by various unit tests defined in the code i * [Get all roles](#get-all-roles) * [Get role by code (or label)](#get-role-by-code-or-label) * [Get all associations](#get-all-associations) +* [Get all concept statuses](#get-concept-statuses) * [Get association by code (or label)](#get-association-by-code-or-label) * [Get all term types](#get-all-term-types) * [Get all synonym sources](#get-all-synonym-sources) @@ -160,6 +187,116 @@ See sample payload data from this call in [`samples/get-concept-by-code-children [Back to Top](#evsrestapi-client-sdk-java-tutorial) +### Get association entries for code/label + +Run the gradle command in the terminal to return association entries for a specified terminology and code or label. Associations used to define subset membership are not resolved by this call. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getAssociationEntriesTest` + +See sample payload data from this call in [`samples/get-association-entries.txt`](samples/get-association-entries.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get associations for code + +Run the gradle command in the terminal to return associations for a given terminology and code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getAssociations1Test` + +See sample payload data from this call in [`samples/get-associations-for-code.txt`](samples/get-associations-for-code.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get "disjoint with" info for code + +Run the gradle command in the terminal to return concepts that are declared "disjoint with" the specified code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getDisjointWithTest` + +See sample payload data from this call in [`samples/get-disjoint-with.txt`](samples/get-disjoint-with.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get history for code + +Run the gradle command in the terminal to return history information for a specified terminology and code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getHistoryTest` + +See sample payload data from this call in [`samples/get-history-for-code.txt`](samples/get-history-for-code.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get inverse associations for code + +Run the gradle command in the terminal to return inverse associations for a given terminology and code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getInverseAssociationsTest` + +See sample payload data from this call in [`samples/get-inverse-associations.txt`](samples/get-inverse-associations.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get inverse roles for code + +Run the gradle command in the terminal to return inverse roles for a given terminology and code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getInverseRolesTest` + +See sample payload data from this call in [`samples/get-inverse-roles.txt`](samples/get-inverse-roles.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get maps for code + +Run the gradle command in the terminal to return map targets for a specified terminology and code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getMapsTest` + +See sample payload data from this call in [`samples/get-maps-for-code.txt`](samples/get-maps-for-code.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get parents for code + +Run the gradle command in the terminal to return parent concepts for a given terminology and code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getParentsTest` + +See sample payload data from this call in [`samples/get-parents.txt`](samples/get-parents.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get roles for code + +Run the gradle command in the terminal to return roles for a given terminology and code. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getRoles1Test` + +See sample payload data from this call in [`samples/get-roles-for-code.txt`](samples/get-roles-for-code.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get subset members for code + +Run the gradle command in the terminal to return subset members for a specified terminology and code. Note: this endpoint will be deprecated in v2 in favor of a top-level subset member endpoint. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getSubsetMembers1Test` + +See sample payload data from this call in [`samples/get-subset-members-for-code.txt`](samples/get-subset-members-for-code.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + +### Get subtree children for code + +Run the gradle command in the terminal to return the subtree children from the root node to the specified code. This call is useful for rendering partial tree views focused on the path to a node. + +`./gradlew test --tests gov.nih.nci.evs.api.ConceptEndpointsApiTest.getSubtreeChildrenTest` + +See sample payload data from this call in [`samples/get-subtree-children.txt`](samples/get-subtree-children.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + ### Get descendants Run the gradle command in the terminal to return concept descendants information for a given terminology and code. The @@ -259,6 +396,16 @@ See sample payload data from this call in [`samples/get-associations.txt`](sampl [Back to Top](#evsrestapi-client-sdk-java-tutorial) +### Get concept statuses + +Run the gradle command in the terminal to return all concept status values for the specified terminology + +`./gradlew test --tests gov.nih.nci.evs.api.MetadataEndpointsApiTest.getConceptStatusesTest` + +See sample payload data from this call in [`samples/get-concept-statuses.txt`](samples/get-concept-statuses.txt) + +[Back to Top](#evsrestapi-client-sdk-java-tutorial) + ### Get association by code (or label) Run the gradle command in the terminal to return association for the specified code or label. The test shows a comple of diff --git a/java-examples/samples/find-concepts-by-search-property-label.txt b/java-examples/samples/find-concepts-by-search-property-label.txt index dc6f4ee3..fbcd8163 100644 --- a/java-examples/samples/find-concepts-by-search-property-label.txt +++ b/java-examples/samples/find-concepts-by-search-property-label.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 123 STANDARD_ERROR - Mar 24, 2025 4:40:15 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchConceptsByPropertyTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = XAV05295I5, property = FDA_UNII_Code [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null total: 1 - timeTaken: 50 + timeTaken: 32 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchConceptsByPropertyTest() STANDARD_ERROR code: C61305 name: Sivifene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -76,11 +72,13 @@ SearchEndpointApiTest > searchConceptsByPropertyTest() STANDARD_ERROR SearchEndpointApiTest > searchConceptsByPropertyTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-subset.txt b/java-examples/samples/find-concepts-by-search-subset.txt index 78992715..8bf68d34 100644 --- a/java-examples/samples/find-concepts-by-search-subset.txt +++ b/java-examples/samples/find-concepts-by-search-subset.txt @@ -8,27 +8,23 @@ > Task :test -Gradle Test Executor 124 STANDARD_ERROR - Mar 24, 2025 4:40:18 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - -SearchEndpointApiTest > searchConceptsBySubsetTest() STANDARD_ERROR - [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = immune, subset = C165258 +SearchEndpointApiTest > findConceptsBySparqlCode() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get SPARQL search results from NCIT for query = SELECT ?code { GRAPH { ?x a owl:Class . ?x :NHC0 ?code . ?x :P108 "Melanoma"} } [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null - total: 35 - timeTaken: 48 + total: 1 + timeTaken: 34 parameters: class SearchCriteria { uri: null ct: null - term: immune + term: null type: contains include: minimal sort: null ascending: true fromRecord: 0 - pageSize: 5 + pageSize: 25 conceptStatus: [] property: [] value: null @@ -37,18 +33,18 @@ SearchEndpointApiTest > searchConceptsBySubsetTest() STANDARD_ERROR definitionSource: [] definitionType: [] synonymTermType: [] - subset: [C165258] - codeList: [] + subset: [] + codeList: [C3224] terminology: [ncit] - sparql: null + sparql: SELECT ?code { GRAPH { ?x a owl:Class . ?x :NHC0 ?code . ?x :P108 "Melanoma"} } } concepts: [class Concept { uri: null ct: null - code: C3507 - name: Immune System Disorder + code: C3224 + name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -71,132 +67,18 @@ SearchEndpointApiTest > searchConceptsBySubsetTest() STANDARD_ERROR history: [] maps: [] paths: null - }, class Concept { - uri: null - ct: null - code: C3446 - name: Primary Immune Thrombocytopenia - terminology: ncit - version: 25.02d - level: null - highlight: null - subsetLink: null - mapsetLink: null - conceptStatus: DEFAULT - source: null - leaf: true - active: true - synonyms: [] - definitions: [] - properties: [] - children: [] - parents: [] - descendants: [] - associations: [] - inverseAssociations: [] - roles: [] - disjointWith: [] - inverseRoles: [] - history: [] - maps: [] - paths: null - }, class Concept { - uri: null - ct: null - code: C152105 - name: Inborn Error of Immunity - terminology: ncit - version: 25.02d - level: null - highlight: null - subsetLink: null - mapsetLink: null - conceptStatus: DEFAULT - source: null - leaf: true - active: true - synonyms: [] - definitions: [] - properties: [] - children: [] - parents: [] - descendants: [] - associations: [] - inverseAssociations: [] - roles: [] - disjointWith: [] - inverseRoles: [] - history: [] - maps: [] - paths: null - }, class Concept { - uri: null - ct: null - code: C2986 - name: Type 1 Diabetes Mellitus - terminology: ncit - version: 25.02d - level: null - highlight: null - subsetLink: null - mapsetLink: null - conceptStatus: DEFAULT - source: null - leaf: true - active: true - synonyms: [] - definitions: [] - properties: [] - children: [] - parents: [] - descendants: [] - associations: [] - inverseAssociations: [] - roles: [] - disjointWith: [] - inverseRoles: [] - history: [] - maps: [] - paths: null - }, class Concept { - uri: null - ct: null - code: C3962 - name: Adenosine Deaminase Deficiency - terminology: ncit - version: 25.02d - level: null - highlight: null - subsetLink: null - mapsetLink: null - conceptStatus: DEFAULT - source: null - leaf: true - active: true - synonyms: [] - definitions: [] - properties: [] - children: [] - parents: [] - descendants: [] - associations: [] - inverseAssociations: [] - roles: [] - disjointWith: [] - inverseRoles: [] - history: [] - maps: [] - paths: null }] } -SearchEndpointApiTest > searchConceptsBySubsetTest() PASSED +SearchEndpointApiTest > findConceptsBySparqlCode() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-C3224.txt b/java-examples/samples/find-concepts-by-search-term-C3224.txt index 11c366dc..51cbf845 100644 --- a/java-examples/samples/find-concepts-by-search-term-C3224.txt +++ b/java-examples/samples/find-concepts-by-search-term-C3224.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 115 STANDARD_ERROR - Mar 24, 2025 4:39:49 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchByCodeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term code = C3224 [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null total: 1 - timeTaken: 35 + timeTaken: 39 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchByCodeTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -76,12 +72,14 @@ SearchEndpointApiTest > searchByCodeTest() STANDARD_ERROR SearchEndpointApiTest > searchByCodeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-OR.txt b/java-examples/samples/find-concepts-by-search-term-OR.txt index 1c72114c..42c3776d 100644 --- a/java-examples/samples/find-concepts-by-search-term-OR.txt +++ b/java-examples/samples/find-concepts-by-search-term-OR.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 121 STANDARD_ERROR - Mar 24, 2025 4:40:09 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchByTypeORTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = malignant melanoma, type = OR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null - total: 5752 - timeTaken: 33 + total: 6020 + timeTaken: 38 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchByTypeORTest() STANDARD_ERROR code: C16835 name: Experimental Malignant Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -77,7 +73,7 @@ SearchEndpointApiTest > searchByTypeORTest() STANDARD_ERROR code: C60451 name: Rat Malignant Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -106,7 +102,7 @@ SearchEndpointApiTest > searchByTypeORTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -135,7 +131,7 @@ SearchEndpointApiTest > searchByTypeORTest() STANDARD_ERROR code: C194143 name: Malignant Melanoma of Lip terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -164,7 +160,7 @@ SearchEndpointApiTest > searchByTypeORTest() STANDARD_ERROR code: C16317 name: B16 Malignant Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -192,11 +188,13 @@ SearchEndpointApiTest > searchByTypeORTest() STANDARD_ERROR SearchEndpointApiTest > searchByTypeORTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-definition-nci.txt b/java-examples/samples/find-concepts-by-search-term-definition-nci.txt index e60ecf04..44120f97 100644 --- a/java-examples/samples/find-concepts-by-search-term-definition-nci.txt +++ b/java-examples/samples/find-concepts-by-search-term-definition-nci.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 111 STANDARD_ERROR - Mar 24, 2025 4:39:36 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchFilterByDefinitionSourceTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = dsDNA, definition source = NCI [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null total: 13 - timeTaken: 49 + timeTaken: 45 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchFilterByDefinitionSourceTest() STANDARD_ERROR code: C449 name: DNA terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -77,7 +73,7 @@ SearchEndpointApiTest > searchFilterByDefinitionSourceTest() STANDARD_ERROR code: C25832 name: DNA Double Strand Break terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -106,7 +102,7 @@ SearchEndpointApiTest > searchFilterByDefinitionSourceTest() STANDARD_ERROR code: C14348 name: Double Stranded DNA Virus terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -135,7 +131,7 @@ SearchEndpointApiTest > searchFilterByDefinitionSourceTest() STANDARD_ERROR code: C114565 name: Anti-ds DNA Antibody terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -164,7 +160,7 @@ SearchEndpointApiTest > searchFilterByDefinitionSourceTest() STANDARD_ERROR code: C211596 name: Anti-ds DNA Antibody Positive terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -192,11 +188,13 @@ SearchEndpointApiTest > searchFilterByDefinitionSourceTest() STANDARD_ERROR SearchEndpointApiTest > searchFilterByDefinitionSourceTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-fuzzy.txt b/java-examples/samples/find-concepts-by-search-term-fuzzy.txt index a81f75ba..5d48d9b7 100644 --- a/java-examples/samples/find-concepts-by-search-term-fuzzy.txt +++ b/java-examples/samples/find-concepts-by-search-term-fuzzy.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 119 STANDARD_ERROR - Mar 24, 2025 4:40:02 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchByTypeFuzzyTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = enzyme, type = fuzzy [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null - total: 2259 - timeTaken: 78 + total: 2307 + timeTaken: 48 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchByTypeFuzzyTest() STANDARD_ERROR code: C16554 name: Enzyme terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -77,7 +73,7 @@ SearchEndpointApiTest > searchByTypeFuzzyTest() STANDARD_ERROR code: C41564 name: Enzyme Induction terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -106,7 +102,7 @@ SearchEndpointApiTest > searchByTypeFuzzyTest() STANDARD_ERROR code: C40500 name: Enzyme Uncoupling terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -135,7 +131,7 @@ SearchEndpointApiTest > searchByTypeFuzzyTest() STANDARD_ERROR code: C21281 name: Enzyme Gene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -164,7 +160,7 @@ SearchEndpointApiTest > searchByTypeFuzzyTest() STANDARD_ERROR code: C17455 name: Enzyme Immunoassay terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -192,11 +188,13 @@ SearchEndpointApiTest > searchByTypeFuzzyTest() STANDARD_ERROR SearchEndpointApiTest > searchByTypeFuzzyTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-highlights.txt b/java-examples/samples/find-concepts-by-search-term-highlights.txt index 92ae2fa5..862176c6 100644 --- a/java-examples/samples/find-concepts-by-search-term-highlights.txt +++ b/java-examples/samples/find-concepts-by-search-term-highlights.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 122 STANDARD_ERROR - Mar 24, 2025 4:40:12 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchWithHighlightsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = XAV05295I5 (with highlights) [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null total: 1 - timeTaken: 39 + timeTaken: 38 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchWithHighlightsTest() STANDARD_ERROR code: C61305 name: Sivifene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -76,11 +72,13 @@ SearchEndpointApiTest > searchWithHighlightsTest() STANDARD_ERROR SearchEndpointApiTest > searchWithHighlightsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-match.txt b/java-examples/samples/find-concepts-by-search-term-match.txt index 2c3aa1b1..734fb8c2 100644 --- a/java-examples/samples/find-concepts-by-search-term-match.txt +++ b/java-examples/samples/find-concepts-by-search-term-match.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 116 STANDARD_ERROR - Mar 24, 2025 4:39:53 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchByTypeMatchTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = enzyme, type = match [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchByTypeMatchTest() STANDARD_ERROR code: C16554 name: Enzyme terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -76,11 +72,13 @@ SearchEndpointApiTest > searchByTypeMatchTest() STANDARD_ERROR SearchEndpointApiTest > searchByTypeMatchTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-retired-concepts.txt b/java-examples/samples/find-concepts-by-search-term-retired-concepts.txt index 360797ea..3ab53fe4 100644 --- a/java-examples/samples/find-concepts-by-search-term-retired-concepts.txt +++ b/java-examples/samples/find-concepts-by-search-term-retired-concepts.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 110 STANDARD_ERROR - Mar 24, 2025 4:39:33 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchFilterByConceptStatusTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = respiratory, concept status = Retired_Concept [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null total: 19 - timeTaken: 62 + timeTaken: 48 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchFilterByConceptStatusTest() STANDARD_ERROR code: C83505 name: Respiratory Acidosis terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -77,7 +73,7 @@ SearchEndpointApiTest > searchFilterByConceptStatusTest() STANDARD_ERROR code: C23710 name: Murine Respiratory System terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -106,7 +102,7 @@ SearchEndpointApiTest > searchFilterByConceptStatusTest() STANDARD_ERROR code: C87173 name: Respiratory Rate Finding terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -135,7 +131,7 @@ SearchEndpointApiTest > searchFilterByConceptStatusTest() STANDARD_ERROR code: C27561 name: Respiratory Distress Syndrome terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -164,7 +160,7 @@ SearchEndpointApiTest > searchFilterByConceptStatusTest() STANDARD_ERROR code: C4928 name: Acute Respiratory Distress Syndrome terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -192,11 +188,13 @@ SearchEndpointApiTest > searchFilterByConceptStatusTest() STANDARD_ERROR SearchEndpointApiTest > searchFilterByConceptStatusTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-startsWith.txt b/java-examples/samples/find-concepts-by-search-term-startsWith.txt index 9e865e53..30f83ca1 100644 --- a/java-examples/samples/find-concepts-by-search-term-startsWith.txt +++ b/java-examples/samples/find-concepts-by-search-term-startsWith.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 118 STANDARD_ERROR - Mar 24, 2025 4:39:59 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchByTypePhraseTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = enzyme, type = phrase [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null - total: 273 - timeTaken: 36 + total: 284 + timeTaken: 42 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchByTypePhraseTest() STANDARD_ERROR code: C16554 name: Enzyme terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -74,17 +70,17 @@ SearchEndpointApiTest > searchByTypePhraseTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C40500 - name: Enzyme Uncoupling + code: C17455 + name: Enzyme Immunoassay terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null mapsetLink: null conceptStatus: DEFAULT source: null - leaf: true + leaf: false active: true synonyms: [] definitions: [] @@ -103,10 +99,10 @@ SearchEndpointApiTest > searchByTypePhraseTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C41564 - name: Enzyme Induction + code: C18296 + name: Pancreatic Enzyme terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -132,10 +128,10 @@ SearchEndpointApiTest > searchByTypePhraseTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C17455 - name: Enzyme Immunoassay + code: C21281 + name: Enzyme Gene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -161,10 +157,10 @@ SearchEndpointApiTest > searchByTypePhraseTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C18296 - name: Pancreatic Enzyme + code: C40578 + name: Enzyme Reactivation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -192,11 +188,13 @@ SearchEndpointApiTest > searchByTypePhraseTest() STANDARD_ERROR SearchEndpointApiTest > searchByTypePhraseTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-synonym-souce-and-term-type.txt b/java-examples/samples/find-concepts-by-search-term-synonym-souce-and-term-type.txt index 3fb765b2..5ce5bf6d 100644 --- a/java-examples/samples/find-concepts-by-search-term-synonym-souce-and-term-type.txt +++ b/java-examples/samples/find-concepts-by-search-term-synonym-souce-and-term-type.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 113 STANDARD_ERROR - Mar 24, 2025 4:39:43 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = dsDNA, synonym source = NCI, synonym term type = PT [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null total: 14 - timeTaken: 64 + timeTaken: 54 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() STANDARD_ER code: C449 name: DNA terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -77,7 +73,7 @@ SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() STANDARD_ER code: C25832 name: DNA Double Strand Break terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -106,7 +102,7 @@ SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() STANDARD_ER code: C14348 name: Double Stranded DNA Virus terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -135,7 +131,7 @@ SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() STANDARD_ER code: C114565 name: Anti-ds DNA Antibody terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -164,7 +160,7 @@ SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() STANDARD_ER code: C211596 name: Anti-ds DNA Antibody Positive terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -192,12 +188,14 @@ SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() STANDARD_ER SearchEndpointApiTest > searchFilterBySynonymSourceAndTermTypeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-concepts-by-search-term-synonym-type.txt b/java-examples/samples/find-concepts-by-search-term-synonym-type.txt index 1a4332b0..71050ec0 100644 --- a/java-examples/samples/find-concepts-by-search-term-synonym-type.txt +++ b/java-examples/samples/find-concepts-by-search-term-synonym-type.txt @@ -8,17 +8,13 @@ > Task :test -Gradle Test Executor 114 STANDARD_ERROR - Mar 24, 2025 4:39:46 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > searchFilterBySynonymType() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get search results from NCIT for term = dsDNA, synonym type = FULL_SYN [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class ConceptResultList { uri: null ct: null total: 14 - timeTaken: 38 + timeTaken: 39 parameters: class SearchCriteria { uri: null ct: null @@ -48,7 +44,7 @@ SearchEndpointApiTest > searchFilterBySynonymType() STANDARD_ERROR code: C449 name: DNA terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -77,7 +73,7 @@ SearchEndpointApiTest > searchFilterBySynonymType() STANDARD_ERROR code: C25832 name: DNA Double Strand Break terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -106,7 +102,7 @@ SearchEndpointApiTest > searchFilterBySynonymType() STANDARD_ERROR code: C14348 name: Double Stranded DNA Virus terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -135,7 +131,7 @@ SearchEndpointApiTest > searchFilterBySynonymType() STANDARD_ERROR code: C114565 name: Anti-ds DNA Antibody terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -164,7 +160,7 @@ SearchEndpointApiTest > searchFilterBySynonymType() STANDARD_ERROR code: C211596 name: Anti-ds DNA Antibody Positive terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -192,11 +188,13 @@ SearchEndpointApiTest > searchFilterBySynonymType() STANDARD_ERROR SearchEndpointApiTest > searchFilterBySynonymType() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/find-roots.txt b/java-examples/samples/find-roots.txt index 5e51c603..ecd6a05e 100644 --- a/java-examples/samples/find-roots.txt +++ b/java-examples/samples/find-roots.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 104 STANDARD_ERROR - Mar 24, 2025 4:39:13 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get root concepts for terminology - ncit [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - root concepts = [class Concept { @@ -20,7 +16,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C12913 name: Abnormal Cell terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -49,7 +45,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C43431 name: Activity terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -78,7 +74,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C12219 name: Anatomic Structure, System, or Substance terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -107,7 +103,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C20633 name: Biochemical Pathway terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -136,7 +132,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C17828 name: Biological Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -165,7 +161,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C12218 name: Chemotherapy Regimen or Agent Combination terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -194,7 +190,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C20181 name: Conceptual Entity terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -223,7 +219,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C20047 name: Diagnostic or Prognostic Factor terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -252,7 +248,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C7057 name: Disease, Disorder or Finding terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -281,7 +277,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C1908 name: Drug, Food, Chemical or Biomedical Material terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -310,7 +306,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C22188 name: Experimental Organism Anatomical Concept terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -339,7 +335,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C22187 name: Experimental Organism Diagnosis terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -368,7 +364,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C16612 name: Gene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -397,7 +393,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C26548 name: Gene Product terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -426,7 +422,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C97325 name: Manufactured Object terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -455,7 +451,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C3910 name: Molecular Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -484,7 +480,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C14250 name: Organism terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -513,7 +509,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C20189 name: Property or Attribute terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -542,7 +538,7 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR code: C28428 name: Retired Concept terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -569,12 +565,14 @@ ConceptEndpointsApiTest > getRootsTest() STANDARD_ERROR ConceptEndpointsApiTest > getRootsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-association-entries.txt b/java-examples/samples/get-association-entries.txt new file mode 100644 index 00000000..f157175b --- /dev/null +++ b/java-examples/samples/get-association-entries.txt @@ -0,0 +1,1456 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getAssociationEntriesTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get association entries for code/label - A5 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - association entries = class AssociationEntryResultList { + uri: null + ct: null + total: 2556 + timeTaken: 129 + parameters: class SearchCriteria { + uri: null + ct: null + term: null + type: contains + include: minimal + sort: null + ascending: null + fromRecord: 0 + pageSize: 100 + conceptStatus: [] + property: [] + value: null + synonymSource: [] + synonymType: [] + definitionSource: [] + definitionType: [] + synonymTermType: [] + subset: [] + codeList: [] + terminology: [ncit, Has_Salt_Or_Ester_Form, 0, 100] + sparql: null + } + associationEntries: [class AssociationEntry { + uri: null + ct: null + code: C80580 + type: null + relatedCode: C80581 + relatedName: Fedotozine Tartrate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Fedotozine + }, class AssociationEntry { + uri: null + ct: null + code: C80583 + type: null + relatedCode: C101535 + relatedName: Ketobemidone Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Ketobemidone + }, class AssociationEntry { + uri: null + ct: null + code: C80585 + type: null + relatedCode: C80586 + relatedName: Nalfurafine Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Nalfurafine + }, class AssociationEntry { + uri: null + ct: null + code: C80589 + type: null + relatedCode: C61103 + relatedName: Noscapine Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Noscapine + }, class AssociationEntry { + uri: null + ct: null + code: C80592 + type: null + relatedCode: C76856 + relatedName: Piridicillin Sodium + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Piridicillin + }, class AssociationEntry { + uri: null + ct: null + code: C80560 + type: null + relatedCode: C81931 + relatedName: Lofemizole Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Lofemizole + }, class AssociationEntry { + uri: null + ct: null + code: C80570 + type: null + relatedCode: C80587 + relatedName: Quadazocine Mesylate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Quadazocine + }, class AssociationEntry { + uri: null + ct: null + code: C80574 + type: null + relatedCode: C77280 + relatedName: Carfentanil Citrate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Carfentanil + }, class AssociationEntry { + uri: null + ct: null + code: C80576 + type: null + relatedCode: C80577 + relatedName: Enadoline Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Enadoline + }, class AssociationEntry { + uri: null + ct: null + code: C80578 + type: null + relatedCode: C83705 + relatedName: Etorphine Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Etorphine + }, class AssociationEntry { + uri: null + ct: null + code: C80579 + type: null + relatedCode: C81387 + relatedName: Faxeladol Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Faxeladol + }, class AssociationEntry { + uri: null + ct: null + code: C80527 + type: null + relatedCode: C80528 + relatedName: Sofinicline Benzenesulfonate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Sofinicline + }, class AssociationEntry { + uri: null + ct: null + code: C80784 + type: null + relatedCode: C80803 + relatedName: Estriol Sodium Succinate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Estriol Succinate + }, class AssociationEntry { + uri: null + ct: null + code: C80792 + type: null + relatedCode: C84591 + relatedName: Sulfabromomethazine Sodium + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Sulfabromomethazine + }, class AssociationEntry { + uri: null + ct: null + code: C80765 + type: null + relatedCode: C81081 + relatedName: Pardoprunox Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Pardoprunox + }, class AssociationEntry { + uri: null + ct: null + code: C80770 + type: null + relatedCode: C80771 + relatedName: Fonazine Mesylate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Fonazine + }, class AssociationEntry { + uri: null + ct: null + code: C80772 + type: null + relatedCode: C95285 + relatedName: Indisetron Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Indisetron + }, class AssociationEntry { + uri: null + ct: null + code: C80775 + type: null + relatedCode: C80763 + relatedName: Naluzotan Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Naluzotan + }, class AssociationEntry { + uri: null + ct: null + code: C80801 + type: null + relatedCode: C152244 + relatedName: Rolitetracycline Nitrate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Rolitetracycline + }, class AssociationEntry { + uri: null + ct: null + code: C80670 + type: null + relatedCode: C81585 + relatedName: Clomacran Phosphate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Clomacran + }, class AssociationEntry { + uri: null + ct: null + code: C80679 + type: null + relatedCode: C80680 + relatedName: Lasofoxifene Tartrate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Lasofoxifene + }, class AssociationEntry { + uri: null + ct: null + code: C80629 + type: null + relatedCode: C78123 + relatedName: Sugammadex Sodium + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Sugammadex + }, class AssociationEntry { + uri: null + ct: null + code: C80630 + type: null + relatedCode: C80631 + relatedName: Sotrastaurin Acetate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Sotrastaurin + }, class AssociationEntry { + uri: null + ct: null + code: C80636 + type: null + relatedCode: C403 + relatedName: Ancitabine Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Ancitabine + }, class AssociationEntry { + uri: null + ct: null + code: C80642 + type: null + relatedCode: C76234 + relatedName: Tosufloxacin Tosylate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: 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version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Conivaptan + }, class AssociationEntry { + uri: null + ct: null + code: C88302 + type: null + relatedCode: C162568 + relatedName: Infigratinib Mesylate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Infigratinib + }, class AssociationEntry { + uri: null + ct: null + code: C88302 + type: null + relatedCode: C175088 + relatedName: Infigratinib Phosphate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Infigratinib + }, class AssociationEntry { + uri: null + ct: null + code: C88303 + type: null + relatedCode: C170314 + relatedName: Pexidartinib Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Pexidartinib + }, class AssociationEntry { + uri: null + ct: null + code: C88309 + type: null + relatedCode: C188510 + relatedName: Motixafortide Acetate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Motixafortide + }, class AssociationEntry { + uri: null + ct: null + code: C88311 + type: null + relatedCode: C201546 + relatedName: Momelotinib Dihydrochloride Monohydrate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Momelotinib + }, class AssociationEntry { + uri: null + ct: null + code: C88311 + type: null + relatedCode: C170191 + relatedName: Momelotinib Dihydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Momelotinib + }, class AssociationEntry { + uri: null + ct: null + code: C88314 + type: null + relatedCode: C171761 + relatedName: Tepotinib Hydrochloride + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Tepotinib + }, class AssociationEntry { + uri: null + ct: null + code: C88323 + type: null + relatedCode: C130049 + relatedName: Burixafor Hydrobromide + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Burixafor + }, class AssociationEntry { + uri: null + ct: null + code: C49094 + type: null + relatedCode: C136891 + relatedName: Neratinib Maleate + source: null + highlight: null + qualifiers: [] + terminology: ncit + version: 25.10d + association: Has_Salt_Or_Ester_Form + name: Neratinib + }] + } + +ConceptEndpointsApiTest > getAssociationEntriesTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-association-with-code.txt b/java-examples/samples/get-association-with-code.txt index cdfb4e1d..0fcb69e9 100644 --- a/java-examples/samples/get-association-with-code.txt +++ b/java-examples/samples/get-association-with-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 97 STANDARD_ERROR - Mar 24, 2025 4:38:51 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getAssociationByCodeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all associations for code - A18 [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - associations = class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getAssociationByCodeTest() STANDARD_ERROR code: A18 name: Has_Pharmaceutical_Basic_Dose_Form terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -47,12 +43,14 @@ MetadataEndpointsApiTest > getAssociationByCodeTest() STANDARD_ERROR MetadataEndpointsApiTest > getAssociationByCodeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-associations-for-code.txt b/java-examples/samples/get-associations-for-code.txt new file mode 100644 index 00000000..263d02c0 --- /dev/null +++ b/java-examples/samples/get-associations-for-code.txt @@ -0,0 +1,315 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getAssociations1Test() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get associations for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - associations = [class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C77526 + relatedName: CDISC SEND Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C88025 + relatedName: CDISC SEND Tumor Findings Results Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C165258 + relatedName: Cellosaurus Disease Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C61410 + relatedName: Clinical Data Interchange Standards Consortium Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C138188 + relatedName: Clinical Trials Search-Application Programming Interface Disease Category Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C156953 + relatedName: CPTAC Baseline Medical Forms Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C158520 + relatedName: CPTAC Codelists Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C159415 + relatedName: CPTAC Melanoma Baseline Form + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C156966 + relatedName: CPTAC Neoplasms Codelist + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C156952 + relatedName: CPTAC Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C157534 + relatedName: CPTAC Uveal Melanoma Baseline Form + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C118168 + relatedName: CTRP Disease Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C116977 + relatedName: CTRP Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C138190 + relatedName: CTS-API Disease Main Type Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Is_Value_For_GDC_Property + relatedCode: C178243 + relatedName: Family Cancer History Relative Primary Diagnosis Question + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C157711 + relatedName: GDC Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C177537 + relatedName: GDC Value Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Is_Value_For_GDC_Property + relatedCode: C176985 + relatedName: Histology ICD-O Morphology Code + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Is_Value_For_GDC_Property + relatedCode: C177621 + relatedName: ICD-O-3 Morphology Term Diagnosis Question + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C168658 + relatedName: Mapped ICDO3.1 Morphology PT Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C168657 + relatedName: Mapped ICDO3.1 Morphology Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C168655 + relatedName: Mapped ICDO3.1 Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C168662 + relatedName: Mapped ICDO3.2 Morphology PT Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C168661 + relatedName: Mapped ICDO3.2 Morphology Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C168656 + relatedName: Mapped ICDO3.2 Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C103113 + relatedName: NCI CTEP SDC Melanoma Sub-Category Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C102905 + relatedName: NCI CTEP Simplified Disease Classification Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C126659 + relatedName: NCIt Neoplasm Core Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C90259 + relatedName: NICHD Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C189762 + relatedName: Pediatric Adverse Events Terminology Mapped to MedDRA + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Concept_In_Subset + relatedCode: C118464 + relatedName: Pediatric Adverse Events Terminology + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Neoplasm_Has_Special_Category + relatedCode: C9292 + relatedName: Solid Neoplasm + source: null + highlight: null + qualifiers: [] + }] + +ConceptEndpointsApiTest > getAssociations1Test() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-associations.txt b/java-examples/samples/get-associations.txt index 268b12c1..212294ac 100644 --- a/java-examples/samples/get-associations.txt +++ b/java-examples/samples/get-associations.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 96 STANDARD_ERROR - Mar 24, 2025 4:38:48 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all associations for terminology - ncit [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - associations = [class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A1 name: Role_Has_Domain terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -49,7 +45,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A12 name: Has_Data_Element terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -78,7 +74,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A13 name: Related_To_Genetic_Biomarker terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -107,7 +103,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A14 name: Neoplasm_Has_Special_Category terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -136,7 +132,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A15 name: Has_CTCAE_5_Parent terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -165,7 +161,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A16 name: Has_INC_Parent terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -194,7 +190,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A17 name: Has_Pharmaceutical_State_Of_Matter terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -223,7 +219,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A18 name: Has_Pharmaceutical_Basic_Dose_Form terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -252,7 +248,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A19 name: Has_Pharmaceutical_Administration_Method terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -281,7 +277,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A2 name: Role_Has_Range terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -310,7 +306,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A20 name: Has_Pharmaceutical_Intended_Site terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -339,7 +335,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A21 name: Has_Pharmaceutical_Release_Characteristics terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -368,7 +364,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A22 name: Has_Pharmaceutical_Transformation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -397,7 +393,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A23 name: Has_PCDC_Data_Type terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -426,7 +422,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A24 name: Is_PCDC_AML_Authorized_Value_For_Variable terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -455,7 +451,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A25 name: Value_Set_Is_Paired_With terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -484,7 +480,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A26 name: Has_PCDC_AML_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -513,7 +509,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A27 name: Has_CTDC_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -542,7 +538,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A28 name: Is_PCDC_EWS_Authorized_Value_For_Variable terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -571,7 +567,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A29 name: Has_PCDC_EWS_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -600,7 +596,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A3 name: Role_Has_Parent terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -629,7 +625,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A30 name: Has_ICDC_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -658,7 +654,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A31 name: Has_GDC_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -687,7 +683,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A32 name: Is_Value_For_GDC_Property terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -716,7 +712,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A33 name: Is_PCDC_GCT_Authorized_Value_For_Variable terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -745,7 +741,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A34 name: Has_PCDC_GCT_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -774,7 +770,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A35 name: Is_PCDC_ALL_Authorized_Value_For_Variable terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -803,7 +799,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A36 name: Has_PCDC_ALL_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -832,7 +828,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A37 name: Has_SeroNet_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -861,7 +857,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A38 name: Has_PCDC_OS_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -890,7 +886,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A39 name: Has_PCDC_HL_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -919,7 +915,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A4 name: Qualifier_Applies_To terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -948,7 +944,7 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR code: A40 name: Has_DIPG_DMG_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -974,10 +970,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A5 - name: Has_Salt_Form + code: A42 + name: Has_OORO_PC_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1003,10 +999,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A6 - name: Has_Free_Acid_Or_Base_Form + code: A48 + name: Has_ACC-AHA_SARS2_Authorized_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1032,10 +1028,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A7 - name: Has_Target + code: A49 + name: Has_PRO-CTCAE_Attribute terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1061,10 +1057,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A8 - name: Concept_In_Subset + code: A5 + name: Has_Salt_Or_Ester_Form terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1090,10 +1086,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A9 - name: Is_Related_To_Endogenous_Product + code: A50 + name: Has_Ped-PRO-CTCAE_Attribute terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1119,10 +1115,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A42 - name: Has_OORO_PC_Value + code: A51 + name: Has_PRO-CTCAE_Attribute_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1148,10 +1144,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A48 - name: Has_ACC-AHA_SARS2_Authorized_Value + code: A52 + name: Has_Ped-PRO-CTCAE_Attribute_Value terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1177,10 +1173,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A49 - name: Has_PRO-CTCAE_Attribute + code: A53 + name: Has_PRO-CTCAE_Parent terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1206,10 +1202,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A50 - name: Has_Ped-PRO-CTCAE_Attribute + code: A54 + name: Has_Ped-PRO-CTCAE_Parent terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1235,10 +1231,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A51 - name: Has_PRO-CTCAE_Attribute_Value + code: A6 + name: Has_Free_Acid_Or_Base_Form terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1264,10 +1260,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A52 - name: Has_Ped-PRO-CTCAE_Attribute_Value + code: A7 + name: Has_Target terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1293,10 +1289,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A53 - name: Has_PRO-CTCAE_Parent + code: A8 + name: Concept_In_Subset terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1322,10 +1318,10 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: A54 - name: Has_Ped-PRO-CTCAE_Parent + code: A9 + name: Is_Related_To_Endogenous_Product terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1352,12 +1348,14 @@ MetadataEndpointsApiTest > getAssociationsTest() STANDARD_ERROR MetadataEndpointsApiTest > getAssociationsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-concept-by-code-children.txt b/java-examples/samples/get-concept-by-code-children.txt index a05dbbd3..08fc0857 100644 --- a/java-examples/samples/get-concept-by-code-children.txt +++ b/java-examples/samples/get-concept-by-code-children.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 87 STANDARD_ERROR - Mar 24, 2025 4:38:19 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getChildrenTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get children for code - C3224 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - children = [class Concept { @@ -162,8 +158,8 @@ ConceptEndpointsApiTest > getChildrenTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C8925 - name: Metastatic Melanoma + code: C217198 + name: Localized Melanoma terminology: null version: null level: null @@ -191,8 +187,8 @@ ConceptEndpointsApiTest > getChildrenTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C66756 - name: Mixed Epithelioid and Spindle Cell Melanoma + code: C215044 + name: Melanoma In Situ terminology: null version: null level: null @@ -220,8 +216,8 @@ ConceptEndpointsApiTest > getChildrenTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C205125 - name: Nodular Melanoma + code: C8925 + name: Metastatic Melanoma terminology: null version: null level: null @@ -249,8 +245,8 @@ ConceptEndpointsApiTest > getChildrenTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C8711 - name: Non-Cutaneous Melanoma + code: C66756 + name: Mixed Epithelioid and Spindle Cell Melanoma terminology: null version: null level: null @@ -278,8 +274,37 @@ ConceptEndpointsApiTest > getChildrenTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C8562 - name: Ocular Melanoma + code: C205125 + name: Nodular Melanoma + terminology: null + version: null + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: null + source: null + leaf: false + active: null + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [] + maps: [] + paths: null + }, class Concept { + uri: null + ct: null + code: C8711 + name: Non-Cutaneous Melanoma terminology: null version: null level: null @@ -540,11 +565,13 @@ ConceptEndpointsApiTest > getChildrenTest() STANDARD_ERROR ConceptEndpointsApiTest > getChildrenTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-concept-by-code-custom.txt b/java-examples/samples/get-concept-by-code-custom.txt index 85036d52..4b0bf4cd 100644 --- a/java-examples/samples/get-concept-by-code-custom.txt +++ b/java-examples/samples/get-concept-by-code-custom.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 86 STANDARD_ERROR - Mar 24, 2025 4:38:16 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get a custom include concept for code - C3224 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - concept = class Concept { @@ -20,7 +16,7 @@ ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -372,8 +368,8 @@ ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C8925 - name: Metastatic Melanoma + code: C217198 + name: Localized Melanoma terminology: null version: null level: null @@ -401,8 +397,8 @@ ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C66756 - name: Mixed Epithelioid and Spindle Cell Melanoma + code: C215044 + name: Melanoma In Situ terminology: null version: null level: null @@ -430,8 +426,8 @@ ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C205125 - name: Nodular Melanoma + code: C8925 + name: Metastatic Melanoma terminology: null version: null level: null @@ -459,8 +455,8 @@ ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C8711 - name: Non-Cutaneous Melanoma + code: C66756 + name: Mixed Epithelioid and Spindle Cell Melanoma terminology: null version: null level: null @@ -488,8 +484,37 @@ ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C8562 - name: Ocular Melanoma + code: C205125 + name: Nodular Melanoma + terminology: null + version: null + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: null + source: null + leaf: false + active: null + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [] + maps: [] + paths: null + }, class Concept { + uri: null + ct: null + code: C8711 + name: Non-Cutaneous Melanoma terminology: null version: null level: null @@ -935,11 +960,13 @@ ConceptEndpointsApiTest > getConceptCustomIncludeTest() STANDARD_ERROR ConceptEndpointsApiTest > getConceptCustomIncludeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-concept-by-code-minimum.txt b/java-examples/samples/get-concept-by-code-minimum.txt index d596c128..394bddfa 100644 --- a/java-examples/samples/get-concept-by-code-minimum.txt +++ b/java-examples/samples/get-concept-by-code-minimum.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 82 STANDARD_ERROR - Mar 24, 2025 4:38:03 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getConceptTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get a single concept for code - C3224 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - concept = class Concept { @@ -20,7 +16,7 @@ ConceptEndpointsApiTest > getConceptTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -47,11 +43,13 @@ ConceptEndpointsApiTest > getConceptTest() STANDARD_ERROR ConceptEndpointsApiTest > getConceptTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-concept-descendants.txt b/java-examples/samples/get-concept-descendants.txt index e893aaa9..f65a249e 100644 --- a/java-examples/samples/get-concept-descendants.txt +++ b/java-examples/samples/get-concept-descendants.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 88 STANDARD_ERROR - Mar 24, 2025 4:38:22 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get list of descendants for code - C3224 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - descendants = [class Concept { @@ -282,7 +278,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR name: Advanced Ocular Melanoma terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -365,8 +361,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4639 - name: Anal Melanoma + code: C215226 + name: Anorectal Melanoma terminology: null version: null level: 4 @@ -375,7 +371,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -514,7 +510,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR name: Childhood Meningeal Melanoma terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -543,7 +539,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR name: Choroid Epithelioid Cell Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -630,7 +626,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR name: Choroid Mixed Epithelioid and Spindle Cell Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -688,7 +684,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR name: Choroid Spindle Cell Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -713,17 +709,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C140659 - name: Choroidal and Ciliary Body Melanoma by AJCC v8 Stage + code: C6861 + name: Choroid Spindle Cell Type A Melanoma terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -742,8 +738,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C6119 - name: Ciliary Body Epithelioid Cell Melanoma + code: C6862 + name: Choroid Spindle Cell Type B Melanoma terminology: null version: null level: 4 @@ -771,17 +767,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C6118 - name: Ciliary Body Intermediate Cell Type Melanoma + code: C140659 + name: Choroidal and Ciliary Body Melanoma by AJCC v8 Stage terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -800,8 +796,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4558 - name: Ciliary Body Melanoma + code: C6119 + name: Ciliary Body Epithelioid Cell Melanoma terminology: null version: null level: 3 @@ -810,7 +806,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -829,8 +825,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C35783 - name: Ciliary Body Mixed Epithelioid and Spindle Cell Melanoma + code: C6118 + name: Ciliary Body Intermediate Cell Type Melanoma terminology: null version: null level: 4 @@ -858,11 +854,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C6117 - name: Ciliary Body Spindle Cell Melanoma + code: C4558 + name: Ciliary Body Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -887,11 +883,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137647 - name: Clinical Stage 0 Cutaneous Melanoma AJCC v8 + code: C35783 + name: Ciliary Body Mixed Epithelioid and Spindle Cell Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -916,11 +912,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137648 - name: Clinical Stage I Cutaneous Melanoma AJCC v8 + code: C6117 + name: Ciliary Body Spindle Cell Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -945,8 +941,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137651 - name: Clinical Stage II Cutaneous Melanoma AJCC v8 + code: C6864 + name: Ciliary Body Spindle Cell Type A Melanoma terminology: null version: null level: 4 @@ -955,7 +951,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -974,8 +970,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137655 - name: Clinical Stage III Cutaneous Melanoma AJCC v8 + code: C6863 + name: Ciliary Body Spindle Cell Type B Melanoma terminology: null version: null level: 4 @@ -1003,8 +999,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137656 - name: Clinical Stage IV Cutaneous Melanoma AJCC v8 + code: C137647 + name: Clinical Stage 0 Cutaneous Melanoma AJCC v8 terminology: null version: null level: 4 @@ -1032,17 +1028,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C213201 - name: Conjunctival Amelanotic Melanoma + code: C137648 + name: Clinical Stage I Cutaneous Melanoma AJCC v8 terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1061,17 +1057,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C204981 - name: Conjunctival Melanoma In Situ + code: C137651 + name: Clinical Stage II Cutaneous Melanoma AJCC v8 terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1090,17 +1086,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4550 - name: Conjunctival Melanoma + code: C137655 + name: Clinical Stage III Cutaneous Melanoma AJCC v8 terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1119,11 +1115,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C213202 - name: Conjunctival Mixed Epithelioid and Spindle Cell Melanoma + code: C137656 + name: Clinical Stage IV Cutaneous Melanoma AJCC v8 terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -1148,11 +1144,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C213200 - name: Conjunctival Nodular Melanoma + code: C213201 + name: Conjunctival Amelanotic Melanoma terminology: null version: null - level: 3 + level: 2 highlight: null subsetLink: null mapsetLink: null @@ -1177,11 +1173,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4553 - name: Corneal Melanoma + code: C204981 + name: Conjunctival Melanoma In Situ terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -1206,17 +1202,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4633 - name: Cutaneous Amelanotic Melanoma + code: C4550 + name: Conjunctival Melanoma terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1235,8 +1231,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C90514 - name: Cutaneous Melanoma by AJCC v6 Stage + code: C213202 + name: Conjunctival Mixed Epithelioid and Spindle Cell Melanoma terminology: null version: null level: 2 @@ -1245,7 +1241,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1264,8 +1260,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C91231 - name: Cutaneous Melanoma by AJCC v7 Stage + code: C213200 + name: Conjunctival Nodular Melanoma terminology: null version: null level: 2 @@ -1274,7 +1270,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1293,8 +1289,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137646 - name: Cutaneous Melanoma by AJCC v8 Clinical Stage + code: C4553 + name: Corneal Melanoma terminology: null version: null level: 3 @@ -1303,7 +1299,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1322,17 +1318,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137657 - name: Cutaneous Melanoma by AJCC v8 Pathologic Stage + code: C4633 + name: Cutaneous Amelanotic Melanoma terminology: null version: null - level: 3 + level: 2 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1351,8 +1347,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C137645 - name: Cutaneous Melanoma by AJCC v8 Stage + code: C90514 + name: Cutaneous Melanoma by AJCC v6 Stage terminology: null version: null level: 2 @@ -1380,8 +1376,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C155305 - name: Cutaneous Melanoma of the Extremity + code: C91231 + name: Cutaneous Melanoma by AJCC v7 Stage terminology: null version: null level: 2 @@ -1409,11 +1405,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C3510 - name: Cutaneous Melanoma + code: C137646 + name: Cutaneous Melanoma by AJCC v8 Clinical Stage terminology: null version: null - level: 1 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -1438,17 +1434,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4225 - name: Cutaneous Nodular Melanoma + code: C137657 + name: Cutaneous Melanoma by AJCC v8 Pathologic Stage terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1467,8 +1463,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C165497 - name: Cutaneous Spitz Melanoma + code: C137645 + name: Cutaneous Melanoma by AJCC v8 Stage terminology: null version: null level: 2 @@ -1477,7 +1473,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1496,8 +1492,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C205127 - name: De Novo Nodular Melanoma + code: C155305 + name: Cutaneous Melanoma of the Extremity terminology: null version: null level: 2 @@ -1506,7 +1502,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1525,17 +1521,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C205129 - name: Dermal Melanoma + code: C3510 + name: Cutaneous Melanoma terminology: null version: null - level: 2 + level: 1 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1554,8 +1550,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C37257 - name: Desmoplastic Melanoma + code: C4225 + name: Cutaneous Nodular Melanoma terminology: null version: null level: 2 @@ -1564,7 +1560,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1583,11 +1579,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C48614 - name: Desmoplastic Neurotropic Melanoma + code: C165497 + name: Cutaneous Spitz Melanoma terminology: null version: null - level: 3 + level: 2 highlight: null subsetLink: null mapsetLink: null @@ -1612,17 +1608,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4236 - name: Epithelioid Cell Melanoma + code: C205127 + name: De Novo Nodular Melanoma terminology: null version: null - level: 1 + level: 2 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1641,11 +1637,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C5707 - name: Esophageal Melanoma + code: C205129 + name: Dermal Melanoma terminology: null version: null - level: 4 + level: 2 highlight: null subsetLink: null mapsetLink: null @@ -1670,8 +1666,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4358 - name: Eyelid Melanoma + code: C37257 + name: Desmoplastic Melanoma terminology: null version: null level: 2 @@ -1680,7 +1676,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1699,11 +1695,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C5735 - name: Gallbladder Melanoma + code: C48614 + name: Desmoplastic Neurotropic Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -1728,17 +1724,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C178519 - name: Gastric Melanoma + code: C7091 + name: Digestive System Mucosal Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1757,11 +1753,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C133187 - name: Head and Neck Mucosal Melanoma + code: C4236 + name: Epithelioid Cell Melanoma terminology: null version: null - level: 3 + level: 1 highlight: null subsetLink: null mapsetLink: null @@ -1786,11 +1782,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C207624 - name: Hereditary Melanoma with CDK4 Mutation + code: C5707 + name: Esophageal Melanoma terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -1815,11 +1811,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C128801 - name: Hereditary Melanoma with CDKN2A Mutation + code: C4358 + name: Eyelid Melanoma terminology: null version: null - level: 3 + level: 2 highlight: null subsetLink: null mapsetLink: null @@ -1844,11 +1840,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C8498 - name: Hereditary Melanoma + code: C178437 + name: Female Genital Tract Mucosal Melanoma terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -1873,17 +1869,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C165659 - name: High-CSD Melanoma + code: C5735 + name: Gallbladder Melanoma terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -1902,11 +1898,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C5442 - name: Intracranial Melanoma + code: C178519 + name: Gastric Melanoma terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -1931,17 +1927,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C48607 - name: Invasive Cutaneous Melanoma + code: C178443 + name: Genitourinary System Mucosal Melanoma terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1960,17 +1956,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C190746 - name: Iridociliary Melanoma + code: C133186 + name: Head and Neck Mucosal Melanoma by AJCC v7 Stage terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -1989,17 +1985,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C174498 - name: Iris Epithelioid Cell Melanoma + code: C133187 + name: Head and Neck Mucosal Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2018,11 +2014,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C6101 - name: Iris Intermediate Cell Type Melanoma + code: C207624 + name: Hereditary Melanoma with CDK4 Mutation terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -2047,8 +2043,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C9088 - name: Iris Melanoma + code: C128801 + name: Hereditary Melanoma with CDKN2A Mutation terminology: null version: null level: 3 @@ -2057,7 +2053,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -2076,17 +2072,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C174506 - name: Iris Mixed Epithelioid and Spindle Cell Melanoma + code: C8498 + name: Hereditary Melanoma terminology: null version: null - level: 4 + level: 2 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2105,17 +2101,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C6098 - name: Iris Spindle Cell Melanoma + code: C165659 + name: High-CSD Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2134,11 +2130,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C188067 - name: Jejunal Melanoma + code: C5442 + name: Intracranial Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -2163,8 +2159,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C175345 - name: Lacrimal Drainage System Melanoma + code: C48607 + name: Invasive Cutaneous Melanoma terminology: null version: null level: 2 @@ -2192,17 +2188,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C9151 - name: Lentigo Maligna Melanoma + code: C190746 + name: Iridociliary Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -2221,11 +2217,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C43372 - name: Lentigo Maligna + code: C174498 + name: Iris Epithelioid Cell Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -2250,11 +2246,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C171285 - name: Locally Advanced Cutaneous Melanoma + code: C6101 + name: Iris Intermediate Cell Type Melanoma terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -2279,11 +2275,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C148494 - name: Locally Advanced Melanoma + code: C9088 + name: Iris Melanoma terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -2308,11 +2304,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C209346 - name: Locally Advanced Mucosal Melanoma + code: C174506 + name: Iris Mixed Epithelioid and Spindle Cell Melanoma terminology: null version: null - level: 4 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -2337,8 +2333,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C171297 - name: Locally Advanced Non-Cutaneous Melanoma + code: C6098 + name: Iris Spindle Cell Melanoma terminology: null version: null level: 3 @@ -2347,7 +2343,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -2366,17 +2362,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C171296 - name: Locally Advanced Ocular Melanoma + code: C188067 + name: Jejunal Melanoma terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -2395,11 +2391,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C190138 - name: Locally Advanced Unresectable Uveal Melanoma + code: C175345 + name: Lacrimal Drainage System Melanoma terminology: null version: null - level: 4 + level: 2 highlight: null subsetLink: null mapsetLink: null @@ -2424,8 +2420,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C204843 - name: Low-CSD Melanoma, Superficial Spreading Melanoma Subtype + code: C9151 + name: Lentigo Maligna Melanoma terminology: null version: null level: 4 @@ -2434,7 +2430,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2453,17 +2449,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C9152 - name: Low-CSD Melanoma + code: C43372 + name: Lentigo Maligna terminology: null version: null - level: 3 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -2482,17 +2478,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C45652 - name: Lung Melanoma + code: C217198 + name: Localized Melanoma terminology: null version: null - level: 2 + level: 1 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2511,11 +2507,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C213491 - name: Mediastinal Melanoma + code: C217197 + name: Localized Uveal Melanoma terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null @@ -2540,8 +2536,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C9090 - name: Medium/Large Size Posterior Uveal Melanoma + code: C171285 + name: Locally Advanced Cutaneous Melanoma terminology: null version: null level: 3 @@ -2550,7 +2546,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2569,8 +2565,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4240 - name: Melanoma Arising in Blue Nevus + code: C148494 + name: Locally Advanced Melanoma terminology: null version: null level: 2 @@ -2579,7 +2575,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2598,11 +2594,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C48613 - name: Melanoma Arising in Congenital Melanocytic Nevus + code: C209346 + name: Locally Advanced Mucosal Melanoma terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -2627,8 +2623,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4235 - name: Melanoma Arising in Giant Congenital Nevus + code: C171297 + name: Locally Advanced Non-Cutaneous Melanoma terminology: null version: null level: 3 @@ -2637,7 +2633,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2656,11 +2652,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C204864 - name: Melanoma in Chronically Sun-Exposed Skin + code: C171296 + name: Locally Advanced Ocular Melanoma terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -2685,17 +2681,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C204840 - name: Melanoma in Intermittently Sun-Exposed Skin + code: C214939 + name: Locally Advanced Unresectable Acral Melanoma terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: false + leaf: true active: null synonyms: [] definitions: [] @@ -2714,17 +2710,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C4232 - name: Melanoma in Junctional Nevus + code: C214936 + name: Locally Advanced Unresectable Cutaneous Melanoma terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2743,17 +2739,17 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C66753 - name: Melanoma in Precancerous Melanosis + code: C214937 + name: Locally Advanced Unresectable Melanoma terminology: null version: null - level: 2 + level: 3 highlight: null subsetLink: null mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2772,11 +2768,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C154473 - name: Melanoma of Unknown Primary + code: C214938 + name: Locally Advanced Unresectable Mucosal Melanoma terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -2801,11 +2797,11 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C5317 - name: Meningeal Melanoma + code: C214950 + name: Locally Advanced Unresectable Non-Cutaneous Melanoma terminology: null version: null - level: 2 + level: 4 highlight: null subsetLink: null mapsetLink: null @@ -2830,8 +2826,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C212032 - name: Metastatic Acral Melanoma + code: C213952 + name: Locally Advanced Uveal Melanoma terminology: null version: null level: 4 @@ -2859,8 +2855,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C169085 - name: Metastatic Choroid Melanoma + code: C204843 + name: Low-CSD Melanoma, Superficial Spreading Melanoma Subtype terminology: null version: null level: 4 @@ -2888,8 +2884,8 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: C182127 - name: Metastatic Conjunctival Melanoma + code: C9152 + name: Low-CSD Melanoma terminology: null version: null level: 3 @@ -2898,7 +2894,7 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR mapsetLink: null conceptStatus: null source: null - leaf: true + leaf: false active: null synonyms: [] definitions: [] @@ -2918,11 +2914,13 @@ ConceptEndpointsApiTest > getDescendantsTest() STANDARD_ERROR ConceptEndpointsApiTest > getDescendantsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-concept-statuses.txt b/java-examples/samples/get-concept-statuses.txt new file mode 100644 index 00000000..0c50e518 --- /dev/null +++ b/java-examples/samples/get-concept-statuses.txt @@ -0,0 +1,27 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +MetadataEndpointsApiTest > getConceptStatusesTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all statuses associated with terminology - ncit + [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - concept statuses = [Header_Concept, Obsolete_Concept, Retired_Concept, Provisional_Concept, Concept_Pending_Approval] + +MetadataEndpointsApiTest > getConceptStatusesTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 3s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-concepts-by-list-of-codes-minimum.txt b/java-examples/samples/get-concepts-by-list-of-codes-minimum.txt index 621ad80f..7196740b 100644 --- a/java-examples/samples/get-concepts-by-list-of-codes-minimum.txt +++ b/java-examples/samples/get-concepts-by-list-of-codes-minimum.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 83 STANDARD_ERROR - Mar 24, 2025 4:38:06 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getConceptsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get list of concepts for codes - C3224 & C3910 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - concepts = [class Concept { @@ -20,7 +16,7 @@ ConceptEndpointsApiTest > getConceptsTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -49,7 +45,7 @@ ConceptEndpointsApiTest > getConceptsTest() STANDARD_ERROR code: C3910 name: Molecular Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -76,11 +72,13 @@ ConceptEndpointsApiTest > getConceptsTest() STANDARD_ERROR ConceptEndpointsApiTest > getConceptsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-definition-type-by-code.txt b/java-examples/samples/get-definition-type-by-code.txt index adf42142..be1b6b62 100644 --- a/java-examples/samples/get-definition-type-by-code.txt +++ b/java-examples/samples/get-definition-type-by-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 101 STANDARD_ERROR - Mar 24, 2025 4:39:04 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getDefinitionTypeByCodeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get the definition type for code - P325 [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - definition type = class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getDefinitionTypeByCodeTest() STANDARD_ERROR code: P325 name: ALT_DEFINITION terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -47,11 +43,13 @@ MetadataEndpointsApiTest > getDefinitionTypeByCodeTest() STANDARD_ERROR MetadataEndpointsApiTest > getDefinitionTypeByCodeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-definition-types.txt b/java-examples/samples/get-definition-types.txt index c9184dd8..158b4f49 100644 --- a/java-examples/samples/get-definition-types.txt +++ b/java-examples/samples/get-definition-types.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 100 STANDARD_ERROR - Mar 24, 2025 4:39:00 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getDefinitionTypesTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all definition types for terminology - ncit [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - definition types = [class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getDefinitionTypesTest() STANDARD_ERROR code: P325 name: ALT_DEFINITION terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -49,7 +45,7 @@ MetadataEndpointsApiTest > getDefinitionTypesTest() STANDARD_ERROR code: P97 name: DEFINITION terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -76,11 +72,13 @@ MetadataEndpointsApiTest > getDefinitionTypesTest() STANDARD_ERROR MetadataEndpointsApiTest > getDefinitionTypesTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-disjoint-with.txt b/java-examples/samples/get-disjoint-with.txt new file mode 100644 index 00000000..e36a42c8 --- /dev/null +++ b/java-examples/samples/get-disjoint-with.txt @@ -0,0 +1,351 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getDisjointWithTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get list of disjoint with for code - C3910 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - disjoint with = [class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C12913 + relatedName: Abnormal Cell + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C12913 + relatedName: Abnormal Cell + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C43431 + relatedName: Activity + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C43431 + relatedName: Activity + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C12219 + relatedName: Anatomic Structure, System, or Substance + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C12219 + relatedName: Anatomic Structure, System, or Substance + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20633 + relatedName: Biochemical Pathway + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20633 + relatedName: Biochemical Pathway + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C17828 + relatedName: Biological Process + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C17828 + relatedName: Biological Process + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C12218 + relatedName: Chemotherapy Regimen or Agent Combination + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C12218 + relatedName: Chemotherapy Regimen or Agent Combination + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20181 + relatedName: Conceptual Entity + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20181 + relatedName: Conceptual Entity + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20047 + relatedName: Diagnostic or Prognostic Factor + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20047 + relatedName: Diagnostic or Prognostic Factor + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C7057 + relatedName: Disease, Disorder or Finding + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C7057 + relatedName: Disease, Disorder or Finding + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C1908 + relatedName: Drug, Food, Chemical or Biomedical Material + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C1908 + relatedName: Drug, Food, Chemical or Biomedical Material + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C22188 + relatedName: Experimental Organism Anatomical Concept + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C22188 + relatedName: Experimental Organism Anatomical Concept + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C22187 + relatedName: Experimental Organism Diagnosis + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C22187 + relatedName: Experimental Organism Diagnosis + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C26548 + relatedName: Gene Product + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C26548 + relatedName: Gene Product + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C16612 + relatedName: Gene + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C16612 + relatedName: Gene + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C97325 + relatedName: Manufactured Object + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C97325 + relatedName: Manufactured Object + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C14250 + relatedName: Organism + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C14250 + relatedName: Organism + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20189 + relatedName: Property or Attribute + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C20189 + relatedName: Property or Attribute + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C28428 + relatedName: Retired Concept + source: null + highlight: null + qualifiers: [] + }, class DisjointWith { + uri: null + ct: null + type: disjointWith + relatedCode: C28428 + relatedName: Retired Concept + source: null + highlight: null + qualifiers: [] + }] + +ConceptEndpointsApiTest > getDisjointWithTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-history-for-code.txt b/java-examples/samples/get-history-for-code.txt new file mode 100644 index 00000000..7248cdde --- /dev/null +++ b/java-examples/samples/get-history-for-code.txt @@ -0,0 +1,2189 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getHistoryTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get history for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - history = class Concept { + uri: null + ct: null + code: C3224 + name: Melanoma + terminology: ncit + version: 25.10d + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: DEFAULT + source: null + leaf: false + active: true + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [class History { + uri: null + ct: null + code: C3224 + name: null + action: create + date: 2003-08-12 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2003-09-29 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2003-10-31 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2003-12-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2004-03-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2004-09-10 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2005-03-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2006-01-03 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2006-01-27 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2006-09-01 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2007-03-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2007-04-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2009-10-27 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2009-11-23 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2010-06-01 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2010-06-07 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-02-07 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-04-11 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-11-14 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-11-21 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-11-28 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-12-05 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-12-12 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-12-19 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2011-12-27 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-01-09 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-01-17 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-01-23 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-01-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-02-06 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-02-13 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-02-21 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-02-27 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-03-05 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-03-12 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-03-19 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-03-26 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-04-02 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-04-09 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-04-16 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-04-23 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-04-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-05-07 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-05-14 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-05-21 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-05-29 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-06-04 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-06-11 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-06-18 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-06-18 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-06-25 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-07-03 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-07-16 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-07-23 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-07-30 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-08-06 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-08-13 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-08-20 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-08-27 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-09-04 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-09-10 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-09-17 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2012-09-24 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + 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action: modify + date: 2013-05-28 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2013-06-03 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2013-06-10 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2013-06-17 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2013-06-24 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2013-07-01 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2013-07-08 + replacementCode: null + 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action: modify + date: 2021-02-22 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2021-03-29 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2021-11-29 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2022-09-26 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2023-02-27 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2023-12-26 + replacementCode: null + replacementName: null + }, class History { + uri: null + ct: null + code: C3224 + name: null + action: modify + date: 2025-03-31 + replacementCode: null + replacementName: null + }] + maps: [] + paths: null + } + +ConceptEndpointsApiTest > getHistoryTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-inverse-associations.txt b/java-examples/samples/get-inverse-associations.txt new file mode 100644 index 00000000..927d583b --- /dev/null +++ b/java-examples/samples/get-inverse-associations.txt @@ -0,0 +1,54 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getInverseAssociationsTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get inverse associations for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - inverse associates = [class Association { + uri: null + ct: null + type: Has_GDC_Value + relatedCode: C178243 + relatedName: Family Cancer History Relative Primary Diagnosis Question + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Has_GDC_Value + relatedCode: C176985 + relatedName: Histology ICD-O Morphology Code + source: null + highlight: null + qualifiers: [] + }, class Association { + uri: null + ct: null + type: Has_GDC_Value + relatedCode: C177621 + relatedName: ICD-O-3 Morphology Term Diagnosis Question + source: null + highlight: null + qualifiers: [] + }] + +ConceptEndpointsApiTest > getInverseAssociationsTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-inverse-roles.txt b/java-examples/samples/get-inverse-roles.txt new file mode 100644 index 00000000..b42ce0d6 --- /dev/null +++ b/java-examples/samples/get-inverse-roles.txt @@ -0,0 +1,531 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getInverseRolesTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get inverse roles for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - inverse roles = [class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C21390 + relatedName: Beta/Gamma Crystallin Domain-Containing Protein 1 + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_May_Have_Associated_Disease + relatedCode: C36101 + relatedName: BRCA2-Related Hereditary Breast and Ovarian Cancer Syndrome + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Regimen_Has_Accepted_Use_For_Disease + relatedCode: C10303 + relatedName: CDB Regimen + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C26083 + relatedName: Chondroitin Sulfate Proteoglycan 4 + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C21389 + relatedName: CRYBG1 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C54321 + relatedName: CRYBG1 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C21470 + relatedName: CSAG2 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C54542 + relatedName: CSAG2 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C81903 + relatedName: CSAG3 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C81904 + relatedName: CSAG3 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C24316 + relatedName: CSPG4 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C52436 + relatedName: CSPG4 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Regimen_Has_Accepted_Use_For_Disease + relatedCode: C63525 + relatedName: CVD Regimen + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Regimen_Has_Accepted_Use_For_Disease + relatedCode: C63785 + relatedName: CVD-Aldesleukin-Interferon Alfa-2b Regimen + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C17680 + relatedName: Cyclin-Dependent Kinase 4 + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C17786 + relatedName: Cyclin-Dependent Kinase Inhibitor 2A + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Regimen_Has_Accepted_Use_For_Disease + relatedCode: C63782 + relatedName: Dacarbazine/Interferon Alfa Regimen + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Regimen_Has_Accepted_Use_For_Disease + relatedCode: C63781 + relatedName: Dartmouth Regimen + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C82885 + relatedName: DCT Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C82886 + relatedName: DCT wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C21569 + relatedName: DNA Repair Protein XRCC3 + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_May_Have_Associated_Disease + relatedCode: C8495 + relatedName: Hereditary Retinoblastoma + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_May_Have_Associated_Disease + relatedCode: C192671 + relatedName: Hereditary Tumor Syndrome Associated with Homologous Recombination Pathway Mutations + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C20765 + relatedName: KISS1 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C54288 + relatedName: KISS1 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C2646 + relatedName: L-Dopachrome Tautomerase + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C26331 + relatedName: Latent-Transforming Growth Factor Beta-Binding Protein 2 + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C24561 + relatedName: LTBP2 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C51270 + relatedName: LTBP2 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C21261 + relatedName: MCAM Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C54308 + relatedName: MCAM wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Is_Biomarker_Of + relatedCode: C17513 + relatedName: Melanoma-Associated Antigen 3 + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C21141 + relatedName: Metastasis-Suppressor KiSS-1 + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C81756 + relatedName: MIR221 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C82171 + relatedName: MIR221 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C80700 + relatedName: MIRLET7A1 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C81825 + relatedName: MIRLET7A1 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C80701 + relatedName: MIRLET7A3 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C81826 + relatedName: MIRLET7A3 wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C80702 + relatedName: MIRLET7B Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C81853 + relatedName: MIRLET7B wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C28629 + relatedName: MLANA Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C54313 + relatedName: MLANA wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Associated_Disease + relatedCode: C40001 + relatedName: Ovarian Dermoid Cyst with Melanoma + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C18336 + relatedName: RAB8A Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C52547 + relatedName: RAB8A wt Allele + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Associated_Disease + relatedCode: C36347 + relatedName: t(8;14)(q24;q11) + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_May_Have_Associated_Disease + relatedCode: C36347 + relatedName: t(8;14)(q24;q11) + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C36347 + relatedName: t(8;14)(q24;q11) + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Is_Biomarker_Of + relatedCode: C36347 + relatedName: t(8;14)(q24;q11) + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C36347 + relatedName: t(8;14)(q24;q11) + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Regimen_Has_Accepted_Use_For_Disease + relatedCode: C36347 + relatedName: t(8;14)(q24;q11) + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Product_Malfunction_Associated_With_Disease + relatedCode: C84349 + relatedName: Tumor Suppressor ARF + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_May_Have_Associated_Disease + relatedCode: C3447 + relatedName: Werner Syndrome + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C20335 + relatedName: XRCC3 Gene + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Gene_Associated_With_Disease + relatedCode: C51014 + relatedName: XRCC3 wt Allele + source: null + highlight: null + qualifiers: [] + }] + +ConceptEndpointsApiTest > getInverseRolesTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-maps-by-mapset-code.txt b/java-examples/samples/get-maps-by-mapset-code.txt index 6926ad78..98943596 100644 --- a/java-examples/samples/get-maps-by-mapset-code.txt +++ b/java-examples/samples/get-maps-by-mapset-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 131 STANDARD_ERROR - Mar 24, 2025 4:40:42 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 2 tests were Method or class mismatch - MapsetEndpointsApiTest > getMapsetMappingsByCodeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MapsetEndpointsApiTest - Get mappings for mapsets by code [Test worker] INFO gov.nih.nci.evs.api.MapsetEndpointsApiTest - mappings = class ConceptMapResultList { @@ -572,11 +568,13 @@ MapsetEndpointsApiTest > getMapsetMappingsByCodeTest() STANDARD_ERROR MapsetEndpointsApiTest > getMapsetMappingsByCodeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-maps-for-code.txt b/java-examples/samples/get-maps-for-code.txt new file mode 100644 index 00000000..4b06d9b1 --- /dev/null +++ b/java-examples/samples/get-maps-for-code.txt @@ -0,0 +1,174 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getMapsTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get maps for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - maps = [class ConceptMap { + uri: null + ct: null + source: null + sourceName: null + sourceTermType: null + sourceCode: null + sourceTerminology: null + sourceTerminologyVersion: null + sourceLoaded: null + type: Related To + rank: null + group: null + rule: null + targetName: 8720/3 + targetTermType: PT + targetCode: morphology + targetTerminology: GDC + targetTerminologyVersion: null + targetLoaded: null + targetTermGroup: null + }, class ConceptMap { + uri: null + ct: null + source: null + sourceName: null + sourceTermType: null + sourceCode: null + sourceTerminology: null + sourceTerminologyVersion: null + sourceLoaded: null + type: Related To + rank: null + group: null + rule: null + targetName: Malignant melanoma, NOS + targetTermType: PT + targetCode: 8720/3 + targetTerminology: ICDO3 + targetTerminologyVersion: 3.2 + targetLoaded: null + targetTermGroup: null + }, class ConceptMap { + uri: null + ct: null + source: null + sourceName: null + sourceTermType: null + sourceCode: null + sourceTerminology: null + sourceTerminologyVersion: null + sourceLoaded: null + type: Related To + rank: null + group: null + rule: null + targetName: Malignant melanoma, NOS + targetTermType: PT + targetCode: 8720/3 + targetTerminology: ICDO3 + targetTerminologyVersion: 3.1 + targetLoaded: null + targetTermGroup: null + }, class ConceptMap { + uri: null + ct: null + source: null + sourceName: null + sourceTermType: null + sourceCode: null + sourceTerminology: null + sourceTerminologyVersion: null + sourceLoaded: null + type: Related To + rank: null + group: null + rule: null + targetName: Malignant melanoma, NOS + targetTermType: PT + targetCode: primary_diagnosis + targetTerminology: GDC + targetTerminologyVersion: null + targetLoaded: null + targetTermGroup: null + }, class ConceptMap { + uri: null + ct: null + source: null + sourceName: null + sourceTermType: null + sourceCode: null + sourceTerminology: null + sourceTerminologyVersion: null + sourceLoaded: null + type: Has Synonym + rank: null + group: null + rule: null + targetName: Melanoma, NOS + targetTermType: PT + targetCode: primary_diagnosis + targetTerminology: GDC + targetTerminologyVersion: null + targetLoaded: null + targetTermGroup: null + }, class ConceptMap { + uri: null + ct: null + source: null + sourceName: null + sourceTermType: null + sourceCode: null + sourceTerminology: null + sourceTerminologyVersion: null + sourceLoaded: null + type: Has Synonym + rank: null + group: null + rule: null + targetName: Melanoma + targetTermType: LLT + targetCode: 10053571 + targetTerminology: MedDRA + targetTerminologyVersion: 18.1 + targetLoaded: null + targetTermGroup: null + }, class ConceptMap { + uri: null + ct: null + source: null + sourceName: null + sourceTermType: null + sourceCode: null + sourceTerminology: null + sourceTerminologyVersion: null + sourceLoaded: null + type: Has Synonym + rank: null + group: null + rule: null + targetName: Melanoma + targetTermType: PT + targetCode: relationship_primary_diagnosis + targetTerminology: GDC + targetTerminologyVersion: null + targetLoaded: null + targetTermGroup: null + }] + +ConceptEndpointsApiTest > getMapsTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-mapset-by-code.txt b/java-examples/samples/get-mapset-by-code.txt index 2de2d3cb..838ac88b 100644 --- a/java-examples/samples/get-mapset-by-code.txt +++ b/java-examples/samples/get-mapset-by-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 130 STANDARD_ERROR - Mar 24, 2025 4:40:39 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 2 tests were Method or class mismatch - MapsetEndpointsApiTest > getMapsetByCodeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MapsetEndpointsApiTest - Get mapset for code - NCIt_Maps_To_ICDO3 [Test worker] INFO gov.nih.nci.evs.api.MapsetEndpointsApiTest - mapset = class Concept { @@ -20,7 +16,7 @@ MapsetEndpointsApiTest > getMapsetByCodeTest() STANDARD_ERROR code: NCIt_Maps_To_ICDO3 name: NCIt_Maps_To_ICDO3 terminology: null - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -47,12 +43,14 @@ MapsetEndpointsApiTest > getMapsetByCodeTest() STANDARD_ERROR MapsetEndpointsApiTest > getMapsetByCodeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-mapsets.txt b/java-examples/samples/get-mapsets.txt index 97ee9ea2..bdb0844c 100644 --- a/java-examples/samples/get-mapsets.txt +++ b/java-examples/samples/get-mapsets.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 129 STANDARD_ERROR - Mar 24, 2025 4:40:36 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 2 tests were Method or class mismatch - MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MapsetEndpointsApiTest - Get all mapsets [Test worker] INFO gov.nih.nci.evs.api.MapsetEndpointsApiTest - mapsets = [class Concept { @@ -75,10 +71,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: NCIT_TO_SWISSPROT - name: NCIT_TO_SWISSPROT - terminology: null - version: Feb2025 + code: SNOMEDCT_US_2025_03_01_to_ICD10CM_2025_Mappings + name: SNOMEDCT_US_2025_03_01 to ICD10CM_2025 Mappings + terminology: snomedct_us + version: 2025_03_01 level: null highlight: null subsetLink: null @@ -104,10 +100,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: NCIt_Maps_To_GDC - name: NCIt_Maps_To_GDC + code: NCIT_TO_SWISSPROT + name: NCIT_TO_SWISSPROT terminology: null - version: 25.02d + version: Sept2025 level: null highlight: null subsetLink: null @@ -115,7 +111,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR conceptStatus: null source: null leaf: null - active: true + active: null synonyms: [] definitions: [] properties: [] @@ -133,10 +129,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: NCIt_Maps_To_ICD9CM - name: NCIt_Maps_To_ICD9CM + code: NCIt_Maps_To_GDC + name: NCIt_Maps_To_GDC terminology: null - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -162,10 +158,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: ICDO_TO_NCI_MORPHOLOGY - name: ICDO_TO_NCI_MORPHOLOGY + code: NCIt_Maps_To_ICD9CM + name: NCIt_Maps_To_ICD9CM terminology: null - version: 2017-12-21 + version: 25.10d level: null highlight: null subsetLink: null @@ -173,7 +169,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR conceptStatus: null source: null leaf: null - active: null + active: true synonyms: [] definitions: [] properties: [] @@ -191,10 +187,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: NCIt_Maps_To_MedDRA - name: NCIt_Maps_To_MedDRA + code: ICDO_TO_NCI_MORPHOLOGY + name: ICDO_TO_NCI_MORPHOLOGY terminology: null - version: 25.02d + version: 2017-12-21 level: null highlight: null subsetLink: null @@ -202,7 +198,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR conceptStatus: null source: null leaf: null - active: true + active: null synonyms: [] definitions: [] properties: [] @@ -220,10 +216,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: NCIt_Maps_To_ICDO3 - name: NCIt_Maps_To_ICDO3 - terminology: null - version: 25.02d + code: SNOMEDCT_US_2025_03_01_to_ICD10_2016_Mappings + name: SNOMEDCT_US_2025_03_01 to ICD10_2016 Mappings + terminology: snomedct_us + version: 2025_03_01 level: null highlight: null subsetLink: null @@ -231,7 +227,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR conceptStatus: null source: null leaf: null - active: true + active: null synonyms: [] definitions: [] properties: [] @@ -249,10 +245,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: SNOMEDCT_US_2024_09_01_to_ICD10CM_2024_Mappings - name: SNOMEDCT_US_2024_09_01 to ICD10CM_2024 Mappings - terminology: snomedct_us - version: 2024_09_01 + code: NCIt_Maps_To_MedDRA + name: NCIt_Maps_To_MedDRA + terminology: null + version: 25.10d level: null highlight: null subsetLink: null @@ -260,7 +256,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR conceptStatus: null source: null leaf: null - active: null + active: true synonyms: [] definitions: [] properties: [] @@ -278,10 +274,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: NCIt_to_ChEBI_Mapping - name: NCIt_to_ChEBI_Mapping + code: NCIt_Maps_To_ICDO3 + name: NCIt_Maps_To_ICDO3 terminology: null - version: Aug2024 + version: 25.10d level: null highlight: null subsetLink: null @@ -289,7 +285,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR conceptStatus: null source: null leaf: null - active: null + active: true synonyms: [] definitions: [] properties: [] @@ -307,10 +303,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: MA_to_NCIt_Mapping - name: MA_to_NCIt_Mapping + code: NCIt_to_ChEBI_Mapping + name: NCIt_to_ChEBI_Mapping terminology: null - version: November2011 + version: Aug2024 level: null highlight: null subsetLink: null @@ -336,10 +332,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: NCIt_to_HGNC_Mapping - name: NCIt_to_HGNC_Mapping + code: MA_to_NCIt_Mapping + name: MA_to_NCIt_Mapping terminology: null - version: Feb2025 + version: November2011 level: null highlight: null subsetLink: null @@ -368,7 +364,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR code: NCIt_Maps_To_ICD10CM name: NCIt_Maps_To_ICD10CM terminology: null - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -397,7 +393,7 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR code: NCIt_Maps_To_ICD10 name: NCIt_Maps_To_ICD10 terminology: null - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -423,10 +419,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: PDQ_2016_07_31_to_NCI_2025_02D_Mappings - name: PDQ_2016_07_31 to NCI_2025_02D Mappings - terminology: pdq - version: 2016_07_31 + code: NCIt_to_HGNC_Mapping + name: NCIt_to_HGNC_Mapping + terminology: null + version: Oct2025 level: null highlight: null subsetLink: null @@ -510,10 +506,10 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: SNOMEDCT_US_2024_09_01_to_ICD10_2016_Mappings - name: SNOMEDCT_US_2024_09_01 to ICD10_2016 Mappings - terminology: snomedct_us - version: 2024_09_01 + code: PDQ_2016_07_31_to_NCI_2025_06E_Mappings + name: PDQ_2016_07_31 to NCI_2025_06E Mappings + terminology: pdq + version: 2016_07_31 level: null highlight: null subsetLink: null @@ -540,12 +536,14 @@ MapsetEndpointsApiTest > getMapsetsTest() STANDARD_ERROR MapsetEndpointsApiTest > getMapsetsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 5s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-parents.txt b/java-examples/samples/get-parents.txt new file mode 100644 index 00000000..4ea6b8e9 --- /dev/null +++ b/java-examples/samples/get-parents.txt @@ -0,0 +1,85 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getParentsTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get parents for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - parents = [class Concept { + uri: null + ct: null + code: C9305 + name: Malignant Neoplasm + terminology: null + version: null + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: null + source: null + leaf: null + active: null + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [] + maps: [] + paths: null + }, class Concept { + uri: null + ct: null + code: C7058 + name: Melanocytic Neoplasm + terminology: null + version: null + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: null + source: null + leaf: null + active: null + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [] + maps: [] + paths: null + }] + +ConceptEndpointsApiTest > getParentsTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-paths-from-root.txt b/java-examples/samples/get-paths-from-root.txt index e7fae4a4..efd261a4 100644 --- a/java-examples/samples/get-paths-from-root.txt +++ b/java-examples/samples/get-paths-from-root.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 106 STANDARD_ERROR - Mar 24, 2025 4:39:20 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get paths from hierarchy root for code - C3224 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - paths from root = [[class Concept { @@ -20,7 +16,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C7057 name: Disease, Disorder or Finding terminology: ncit - version: 25.02d + version: 25.10d level: 0 highlight: null subsetLink: null @@ -49,7 +45,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C2991 name: Disease or Disorder terminology: ncit - version: 25.02d + version: 25.10d level: 1 highlight: null subsetLink: null @@ -78,7 +74,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C3262 name: Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 2 highlight: null subsetLink: null @@ -107,7 +103,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C4741 name: Neoplasm by Morphology terminology: ncit - version: 25.02d + version: 25.10d level: 3 highlight: null subsetLink: null @@ -136,7 +132,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C7058 name: Melanocytic Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 4 highlight: null subsetLink: null @@ -165,7 +161,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: 5 highlight: null subsetLink: null @@ -194,7 +190,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C7057 name: Disease, Disorder or Finding terminology: ncit - version: 25.02d + version: 25.10d level: 0 highlight: null subsetLink: null @@ -223,7 +219,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C2991 name: Disease or Disorder terminology: ncit - version: 25.02d + version: 25.10d level: 1 highlight: null subsetLink: null @@ -252,7 +248,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C3262 name: Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 2 highlight: null subsetLink: null @@ -281,7 +277,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C7062 name: Neoplasm by Special Category terminology: ncit - version: 25.02d + version: 25.10d level: 3 highlight: null subsetLink: null @@ -310,7 +306,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C9305 name: Malignant Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 4 highlight: null subsetLink: null @@ -339,7 +335,7 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: 5 highlight: null subsetLink: null @@ -366,12 +362,14 @@ ConceptEndpointsApiTest > getPathsFromRootTest() STANDARD_ERROR ConceptEndpointsApiTest > getPathsFromRootTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-paths-to-ancestor.txt b/java-examples/samples/get-paths-to-ancestor.txt index 77450956..386f1c25 100644 --- a/java-examples/samples/get-paths-to-ancestor.txt +++ b/java-examples/samples/get-paths-to-ancestor.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 107 STANDARD_ERROR - Mar 24, 2025 4:39:23 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get paths from code to ancestor code - C3224 to C2991 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - paths to ancestor code = [[class Concept { @@ -20,7 +16,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: 0 highlight: null subsetLink: null @@ -49,7 +45,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C7058 name: Melanocytic Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 1 highlight: null subsetLink: null @@ -78,7 +74,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C4741 name: Neoplasm by Morphology terminology: ncit - version: 25.02d + version: 25.10d level: 2 highlight: null subsetLink: null @@ -107,7 +103,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C3262 name: Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 3 highlight: null subsetLink: null @@ -136,7 +132,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C2991 name: Disease or Disorder terminology: ncit - version: 25.02d + version: 25.10d level: 4 highlight: null subsetLink: null @@ -165,7 +161,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: 0 highlight: null subsetLink: null @@ -194,7 +190,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C9305 name: Malignant Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 1 highlight: null subsetLink: null @@ -223,7 +219,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C7062 name: Neoplasm by Special Category terminology: ncit - version: 25.02d + version: 25.10d level: 2 highlight: null subsetLink: null @@ -252,7 +248,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C3262 name: Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 3 highlight: null subsetLink: null @@ -281,7 +277,7 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR code: C2991 name: Disease or Disorder terminology: ncit - version: 25.02d + version: 25.10d level: 4 highlight: null subsetLink: null @@ -308,11 +304,13 @@ ConceptEndpointsApiTest > getPathsToAncestorTest() STANDARD_ERROR ConceptEndpointsApiTest > getPathsToAncestorTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-paths-to-root.txt b/java-examples/samples/get-paths-to-root.txt index b0d4ebad..801346b3 100644 --- a/java-examples/samples/get-paths-to-root.txt +++ b/java-examples/samples/get-paths-to-root.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 105 STANDARD_ERROR - Mar 24, 2025 4:39:17 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get paths to hierarchy root from code - C3224 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - paths to root = [[class Concept { @@ -20,7 +16,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: 0 highlight: null subsetLink: null @@ -49,7 +45,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C7058 name: Melanocytic Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 1 highlight: null subsetLink: null @@ -78,7 +74,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C4741 name: Neoplasm by Morphology terminology: ncit - version: 25.02d + version: 25.10d level: 2 highlight: null subsetLink: null @@ -107,7 +103,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C3262 name: Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 3 highlight: null subsetLink: null @@ -136,7 +132,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C2991 name: Disease or Disorder terminology: ncit - version: 25.02d + version: 25.10d level: 4 highlight: null subsetLink: null @@ -165,7 +161,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C7057 name: Disease, Disorder or Finding terminology: ncit - version: 25.02d + version: 25.10d level: 5 highlight: null subsetLink: null @@ -194,7 +190,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C3224 name: Melanoma terminology: ncit - version: 25.02d + version: 25.10d level: 0 highlight: null subsetLink: null @@ -223,7 +219,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C9305 name: Malignant Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 1 highlight: null subsetLink: null @@ -252,7 +248,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C7062 name: Neoplasm by Special Category terminology: ncit - version: 25.02d + version: 25.10d level: 2 highlight: null subsetLink: null @@ -281,7 +277,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C3262 name: Neoplasm terminology: ncit - version: 25.02d + version: 25.10d level: 3 highlight: null subsetLink: null @@ -310,7 +306,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C2991 name: Disease or Disorder terminology: ncit - version: 25.02d + version: 25.10d level: 4 highlight: null subsetLink: null @@ -339,7 +335,7 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR code: C7057 name: Disease, Disorder or Finding terminology: ncit - version: 25.02d + version: 25.10d level: 5 highlight: null subsetLink: null @@ -366,12 +362,14 @@ ConceptEndpointsApiTest > getPathsToRootTest() STANDARD_ERROR ConceptEndpointsApiTest > getPathsToRootTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-properties.txt b/java-examples/samples/get-properties.txt index f4276115..0d65035c 100644 --- a/java-examples/samples/get-properties.txt +++ b/java-examples/samples/get-properties.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 89 STANDARD_ERROR - Mar 24, 2025 4:38:25 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all properties for a term & list of codes/labels - ncit [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - properties = [class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: oboInOwl:hasDbXref name: xRef terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -49,7 +45,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: NHC0 name: code terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -78,7 +74,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P100 name: OMIM_Number terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -107,7 +103,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P101 name: Homologous_Gene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -136,7 +132,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P102 name: GenBank_Accession_Number terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -165,7 +161,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P106 name: Semantic_Type terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -194,7 +190,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P107 name: Display_Name terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -223,7 +219,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P108 name: Preferred_Name terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -252,7 +248,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P167 name: Image_Link terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -281,7 +277,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P171 name: PubMedID_Primary_Reference terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -310,7 +306,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P175 name: NSC Number terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -339,7 +335,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P200 name: OLD_PARENT terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -368,7 +364,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P201 name: OLD_CHILD terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -397,7 +393,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P203 name: OLD_KIND terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -426,7 +422,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P204 name: OLD_ROLE terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -455,7 +451,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P207 name: UMLS_CUI terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -484,7 +480,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P208 name: NCI_META_CUI terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -513,7 +509,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P210 name: CAS_Registry terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -542,7 +538,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P211 name: GO_Annotation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -571,7 +567,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P215 name: KEGG_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -600,7 +596,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P216 name: BioCarta_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -629,7 +625,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P302 name: Accepted_Therapeutic_Use_For terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -658,7 +654,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P310 name: Concept_Status terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -687,7 +683,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P315 name: SNP_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -716,7 +712,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P316 name: Relative_Enzyme_Activity terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -745,7 +741,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P317 name: FDA_Table terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -774,7 +770,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P319 name: FDA_UNII_Code terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -803,7 +799,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P320 name: OID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -832,7 +828,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P321 name: EntrezGene_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -861,7 +857,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P322 name: Contributing_Source terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -890,7 +886,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P325 name: ALT_DEFINITION terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -919,7 +915,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P329 name: PDQ_Open_Trial_Search_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -948,7 +944,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P330 name: PDQ_Closed_Trial_Search_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -977,7 +973,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P331 name: NCBI_Taxon_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1006,7 +1002,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P332 name: MGI_Accession_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1035,7 +1031,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P333 name: Use_For terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1064,7 +1060,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P334 name: ICD-O-3_Code terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1093,7 +1089,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P350 name: Chemical_Formula terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1122,7 +1118,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P351 name: US_Recommended_Intake terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1151,7 +1147,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P352 name: Tolerable_Level terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1180,7 +1176,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P353 name: INFOODS terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1209,7 +1205,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P354 name: USDA_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1238,7 +1234,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P355 name: Unit terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1267,7 +1263,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P356 name: Essential_Amino_Acid terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1296,7 +1292,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P357 name: Essential_Fatty_Acid terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1325,7 +1321,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P358 name: Nutrient terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1354,7 +1350,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P359 name: Micronutrient terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1383,7 +1379,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P360 name: Macronutrient terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1412,7 +1408,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P361 name: Extensible_List terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1441,7 +1437,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P362 name: miRBase_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1470,7 +1466,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P363 name: Neoplastic_Status terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1499,7 +1495,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P364 name: OLD_ASSOCIATION terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1528,7 +1524,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P366 name: Legacy Concept Name terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1557,7 +1553,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P367 name: PID_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1586,7 +1582,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P368 name: CHEBI_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1615,7 +1611,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P369 name: HGNC_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1644,7 +1640,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P371 name: NICHD_Hierarchy_Term terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1673,7 +1669,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P372 name: Publish_Value_Set terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1702,7 +1698,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P374 name: Value_Set_Location terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1731,7 +1727,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P375 name: Maps_To terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1760,7 +1756,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P376 name: Term_Browser_Value_Set_Description terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1789,7 +1785,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P398 name: Value_Set_Pair terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1818,7 +1814,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P399 name: NCI_Drug_Dictionary_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1847,7 +1843,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P400 name: ClinVar_Variation_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1876,7 +1872,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P90 name: FULL_SYN terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1905,7 +1901,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P92 name: Subsource terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1934,7 +1930,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P93 name: Swiss_Prot terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1963,7 +1959,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P96 name: Gene_Encodes_Product terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1992,7 +1988,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P97 name: DEFINITION terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2021,7 +2017,7 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR code: P98 name: DesignNote terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2048,11 +2044,13 @@ MetadataEndpointsApiTest > getPropertiesTest() STANDARD_ERROR MetadataEndpointsApiTest > getPropertiesTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-property-with-code.txt b/java-examples/samples/get-property-with-code.txt index 6d8bfa0a..34f9550b 100644 --- a/java-examples/samples/get-property-with-code.txt +++ b/java-examples/samples/get-property-with-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 90 STANDARD_ERROR - Mar 24, 2025 4:38:29 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getPropertyTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get full property for code - P216 [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - property = class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getPropertyTest() STANDARD_ERROR code: P216 name: BioCarta_ID terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -99,11 +95,13 @@ MetadataEndpointsApiTest > getPropertyTest() STANDARD_ERROR MetadataEndpointsApiTest > getPropertyTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-qualifier-values-with-code.txt b/java-examples/samples/get-qualifier-values-with-code.txt index d53c70ab..b7c69ae4 100644 --- a/java-examples/samples/get-qualifier-values-with-code.txt +++ b/java-examples/samples/get-qualifier-values-with-code.txt @@ -8,22 +8,20 @@ > Task :test -Gradle Test Executor 93 STANDARD_ERROR - Mar 24, 2025 4:38:38 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getQualifierValuesTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get qualifier values for code/name - P390 [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - qualifier values = [CGAP] MetadataEndpointsApiTest > getQualifierValuesTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-qualifier-with-code.txt b/java-examples/samples/get-qualifier-with-code.txt index e5ff0cbe..ce6b979f 100644 --- a/java-examples/samples/get-qualifier-with-code.txt +++ b/java-examples/samples/get-qualifier-with-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 92 STANDARD_ERROR - Mar 24, 2025 4:38:35 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getQualifierTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get qualifier for code - P390 [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - qualifier = class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getQualifierTest() STANDARD_ERROR code: P390 name: go-source terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -75,11 +71,13 @@ MetadataEndpointsApiTest > getQualifierTest() STANDARD_ERROR MetadataEndpointsApiTest > getQualifierTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-replacements-for-concept-code-list.txt b/java-examples/samples/get-replacements-for-concept-code-list.txt index 6044772d..735d5886 100644 --- a/java-examples/samples/get-replacements-for-concept-code-list.txt +++ b/java-examples/samples/get-replacements-for-concept-code-list.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 133 STANDARD_ERROR - Mar 24, 2025 4:40:48 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 1 tests were Method or class mismatch - HistoryEndpointsApiTest > getReplacementsFromListTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.HistoryEndpointsApiTest - Get list of suggested replacements for retired codes - C12658,C13320 [Test worker] INFO gov.nih.nci.evs.api.HistoryEndpointsApiTest - suggested replacements = [class History { @@ -36,11 +32,13 @@ HistoryEndpointsApiTest > getReplacementsFromListTest() STANDARD_ERROR HistoryEndpointsApiTest > getReplacementsFromListTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-replacements-for-concept-code.txt b/java-examples/samples/get-replacements-for-concept-code.txt index ec30cb9f..39f2cf6c 100644 --- a/java-examples/samples/get-replacements-for-concept-code.txt +++ b/java-examples/samples/get-replacements-for-concept-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 132 STANDARD_ERROR - Mar 24, 2025 4:40:45 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 1 tests were Method or class mismatch - HistoryEndpointsApiTest > getReplacementsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.HistoryEndpointsApiTest - Get suggested replacements for code - C4654 [Test worker] INFO gov.nih.nci.evs.api.HistoryEndpointsApiTest - replacements = [class History { @@ -27,11 +23,13 @@ HistoryEndpointsApiTest > getReplacementsTest() STANDARD_ERROR HistoryEndpointsApiTest > getReplacementsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-role-with-code.txt b/java-examples/samples/get-role-with-code.txt index c485b654..2e77f56e 100644 --- a/java-examples/samples/get-role-with-code.txt +++ b/java-examples/samples/get-role-with-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 95 STANDARD_ERROR - Mar 24, 2025 4:38:45 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getRoleTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get the role for code - R123 [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - role = class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getRoleTest() STANDARD_ERROR code: R123 name: Chemotherapy_Regimen_Has_Component terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -99,12 +95,14 @@ MetadataEndpointsApiTest > getRoleTest() STANDARD_ERROR MetadataEndpointsApiTest > getRoleTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-roles-for-code.txt b/java-examples/samples/get-roles-for-code.txt new file mode 100644 index 00000000..c27796a2 --- /dev/null +++ b/java-examples/samples/get-roles-for-code.txt @@ -0,0 +1,108 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getRoles1Test() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get roles for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - roles = [class Role { + uri: null + ct: null + type: Disease_Excludes_Finding + relatedCode: C36122 + relatedName: Benign Cellular Infiltrate + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_May_Have_Finding + relatedCode: C43268 + relatedName: HMB-45-Positive Neoplastic Cells Present + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Abnormal_Cell + relatedCode: C12917 + relatedName: Malignant Cell + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Finding + relatedCode: C36115 + relatedName: Malignant Cellular Infiltrate + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Normal_Cell_Origin + relatedCode: C12591 + relatedName: Melanocyte + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Abnormal_Cell + relatedCode: C36873 + relatedName: Melanoma Cell + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Abnormal_Cell + relatedCode: C12922 + relatedName: Neoplastic Cell + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_Has_Abnormal_Cell + relatedCode: C36862 + relatedName: Neoplastic Melanocyte + source: null + highlight: null + qualifiers: [] + }, class Role { + uri: null + ct: null + type: Disease_May_Have_Finding + relatedCode: C40993 + relatedName: S-100-Positive Neoplastic Cells Present + source: null + highlight: null + qualifiers: [] + }] + +ConceptEndpointsApiTest > getRoles1Test() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 3s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-roles.txt b/java-examples/samples/get-roles.txt index 3e4f54d3..8af902a2 100644 --- a/java-examples/samples/get-roles.txt +++ b/java-examples/samples/get-roles.txt @@ -8,19 +8,15 @@ > Task :test -Gradle Test Executor 94 STANDARD_ERROR - Mar 24, 2025 4:38:41 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all roles for ncit [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - roles = [class Concept { uri: null ct: null - code: R123 - name: Chemotherapy_Regimen_Has_Component + code: R100 + name: Disease_Has_Associated_Anatomic_Site terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -46,10 +42,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R163 - name: Procedure_Has_Target_Anatomy + code: R101 + name: Disease_Has_Primary_Anatomic_Site terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -75,10 +71,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R100 - name: Disease_Has_Associated_Anatomic_Site + code: R102 + name: Disease_Has_Metastatic_Anatomic_Site terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -104,10 +100,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R126 - name: Disease_Has_Associated_Disease + code: R103 + name: Disease_Has_Normal_Tissue_Origin terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -133,10 +129,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R101 - name: Disease_Has_Primary_Anatomic_Site + code: R104 + name: Disease_Has_Normal_Cell_Origin terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -162,10 +158,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R103 - name: Disease_Has_Normal_Tissue_Origin + code: R105 + name: Disease_Has_Abnormal_Cell terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -191,10 +187,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R104 - name: Disease_Has_Normal_Cell_Origin + code: R106 + name: Disease_Has_Molecular_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -220,10 +216,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R105 - name: Disease_Has_Abnormal_Cell + code: R107 + name: Disease_Has_Cytogenetic_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -252,7 +248,7 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR code: R108 name: Disease_Has_Finding terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -278,10 +274,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R115 - name: Disease_May_Have_Finding + code: R110 + name: Disease_Is_Grade terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -307,10 +303,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R139 - name: Disease_Excludes_Abnormal_Cell + code: R111 + name: Disease_May_Have_Normal_Tissue_Origin terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -336,10 +332,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R142 - name: Disease_Excludes_Finding + code: R112 + name: Disease_May_Have_Normal_Cell_Origin terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -365,10 +361,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R124 - name: Chemical_Or_Drug_Has_Mechanism_Of_Action + code: R113 + name: Disease_May_Have_Abnormal_Cell terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -394,10 +390,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R125 - name: Chemical_Or_Drug_Has_Physiologic_Effect + code: R114 + name: Disease_May_Have_Cytogenetic_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -423,10 +419,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R146 - name: Chemical_Or_Drug_Affects_Gene_Product + code: R115 + name: Disease_May_Have_Finding terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -452,10 +448,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R50 - name: Gene_Product_Has_Structural_Domain_Or_Motif + code: R116 + name: Disease_May_Have_Associated_Disease terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -481,10 +477,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R52 - name: Gene_Product_Has_Biochemical_Function + code: R122 + name: Chemical_Or_Drug_Is_Metabolized_By_Enzyme terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -510,10 +506,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R53 - name: Gene_Product_Plays_Role_In_Biological_Process + code: R123 + name: Chemotherapy_Regimen_Has_Component terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -539,10 +535,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R54 - name: Gene_Product_Encoded_By_Gene + code: R124 + name: Chemical_Or_Drug_Has_Mechanism_Of_Action terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -568,10 +564,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R135 - name: Disease_Excludes_Primary_Anatomic_Site + code: R125 + name: Chemical_Or_Drug_Has_Physiologic_Effect terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -597,10 +593,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R72 - name: Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue + code: R126 + name: Disease_Has_Associated_Disease terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -626,10 +622,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R116 - name: Disease_May_Have_Associated_Disease + code: R130 + name: Gene_Is_Element_In_Pathway terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -655,10 +651,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R175 - name: Gene_Involved_In_Pathogenesis_Of_Disease + code: R131 + name: Gene_Product_Is_Element_In_Pathway terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -684,10 +680,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R37 - name: Gene_Plays_Role_In_Process + code: R132 + name: Gene_Has_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -713,10 +709,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R132 - name: Gene_Has_Abnormality + code: R133 + name: Gene_Product_Has_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -742,10 +738,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R133 - name: Gene_Product_Has_Abnormality + code: R135 + name: Disease_Excludes_Primary_Anatomic_Site terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -771,10 +767,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R41 - name: Gene_Found_In_Organism + code: R136 + name: Disease_Excludes_Metastatic_Anatomic_Site terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -800,10 +796,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R40 - name: Gene_In_Chromosomal_Location + code: R137 + name: Disease_Excludes_Normal_Tissue_Origin terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -829,10 +825,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R46 - name: Gene_Product_Has_Associated_Anatomy + code: R138 + name: Disease_Excludes_Normal_Cell_Origin terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -858,10 +854,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R49 - name: Gene_Product_Expressed_In_Tissue + code: R139 + name: Disease_Excludes_Abnormal_Cell terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -887,10 +883,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R51 - name: Gene_Product_Is_Physical_Part_Of + code: R140 + name: Disease_Excludes_Molecular_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -916,10 +912,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R130 - name: Gene_Is_Element_In_Pathway + code: R141 + name: Disease_Excludes_Cytogenetic_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -945,10 +941,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R131 - name: Gene_Product_Is_Element_In_Pathway + code: R142 + name: Disease_Excludes_Finding terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -974,10 +970,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R44 - name: Gene_Product_Has_Chemical_Classification + code: R145 + name: Gene_Has_Physical_Location terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1003,10 +999,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R177 - name: Molecular_Abnormality_Involves_Gene + code: R146 + name: Chemical_Or_Drug_Affects_Gene_Product terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1032,10 +1028,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R178 - name: Gene_Mutant_Encodes_Gene_Product_Sequence_Variation + code: R150 + name: Chemical_Or_Drug_Affects_Abnormal_Cell terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1061,10 +1057,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R179 - name: Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant + code: R153 + name: Allele_Has_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1090,10 +1086,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R182 - name: Gene_Product_Variant_Of_Gene_Product + code: R155 + name: Allele_In_Chromosomal_Location terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1119,10 +1115,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R42 - name: Gene_Product_Is_Biomarker_Type + code: R40 + name: Gene_In_Chromosomal_Location terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1148,10 +1144,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R45 - name: Gene_Product_Has_Organism_Source + code: R156 + name: Allele_Absent_From_Wild-type_Chromosomal_Location terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1177,10 +1173,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R176 - name: Disease_Mapped_To_Gene + code: R158 + name: Allele_Plays_Altered_Role_In_Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1206,10 +1202,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R106 - name: Disease_Has_Molecular_Abnormality + code: R37 + name: Gene_Plays_Role_In_Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1235,10 +1231,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R174 - name: Disease_Mapped_To_Chromosome + code: R159 + name: Allele_Has_Activity terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1264,10 +1260,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R27 - name: Conceptual_Part_Of + code: R160 + name: Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1293,10 +1289,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R167 - name: Procedure_Has_Excised_Anatomy + code: R163 + name: Procedure_Has_Target_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1322,10 +1318,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R169 - name: Procedure_Has_Partially_Excised_Anatomy + code: R165 + name: Procedure_Has_Imaged_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1351,10 +1347,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R82 - name: Anatomic_Structure_Is_Physical_Part_Of + code: R166 + name: Procedure_May_Have_Excised_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1380,10 +1376,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R122 - name: Chemical_Or_Drug_Is_Metabolized_By_Enzyme + code: R167 + name: Procedure_Has_Excised_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1409,10 +1405,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R88 - name: Disease_Is_Stage + code: R168 + name: Procedure_May_Have_Partially_Excised_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1438,10 +1434,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R47 - name: Gene_Product_Is_Biomarker_Of + code: R169 + name: Procedure_Has_Partially_Excised_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1467,10 +1463,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R38 - name: Gene_Associated_With_Disease + code: R170 + name: Procedure_May_Have_Completely_Excised_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1496,10 +1492,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R155 - name: Allele_In_Chromosomal_Location + code: R171 + name: Procedure_Has_Completely_Excised_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1525,10 +1521,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R137 - name: Disease_Excludes_Normal_Tissue_Origin + code: R172 + name: Regimen_Has_Accepted_Use_For_Disease terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1554,10 +1550,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R138 - name: Disease_Excludes_Normal_Cell_Origin + code: R173 + name: Cytogenetic_Abnormality_Involves_Chromosome terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1583,10 +1579,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R32 - name: Biological_Process_Has_Initiator_Chemical_Or_Drug + code: R82 + name: Anatomic_Structure_Is_Physical_Part_Of terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1612,10 +1608,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R114 - name: Disease_May_Have_Cytogenetic_Abnormality + code: R174 + name: Disease_Mapped_To_Chromosome terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1641,10 +1637,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R89 - name: Disease_May_Have_Molecular_Abnormality + code: R175 + name: Gene_Involved_In_Pathogenesis_Of_Disease terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1670,10 +1666,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R110 - name: Disease_Is_Grade + code: R176 + name: Disease_Mapped_To_Gene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1699,10 +1695,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R172 - name: Regimen_Has_Accepted_Use_For_Disease + code: R177 + name: Molecular_Abnormality_Involves_Gene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1728,10 +1724,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R171 - name: Procedure_Has_Completely_Excised_Anatomy + code: R178 + name: Gene_Mutant_Encodes_Gene_Product_Sequence_Variation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1757,10 +1753,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R30 - name: Biological_Process_Has_Associated_Location + code: R179 + name: Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1786,10 +1782,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R81 - name: Anatomic_Structure_Has_Location + code: R182 + name: Gene_Product_Variant_Of_Gene_Product terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1815,10 +1811,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R48 - name: Gene_Product_Malfunction_Associated_With_Disease + code: R23 + name: EO_Disease_Has_Associated_Cell_Type terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1844,10 +1840,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R140 - name: Disease_Excludes_Molecular_Abnormality + code: R24 + name: EO_Disease_Maps_To_Human_Disease terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1876,7 +1872,7 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR code: R25 name: EO_Disease_Has_Associated_EO_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1902,10 +1898,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R24 - name: EO_Disease_Maps_To_Human_Disease + code: R26 + name: EO_Disease_Has_Property_Or_Attribute terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1931,10 +1927,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R26 - name: EO_Disease_Has_Property_Or_Attribute + code: R27 + name: Conceptual_Part_Of terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1960,10 +1956,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R141 - name: Disease_Excludes_Cytogenetic_Abnormality + code: R28 + name: Biological_Process_Has_Initiator_Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -1989,10 +1985,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R107 - name: Disease_Has_Cytogenetic_Abnormality + code: R29 + name: Biological_Process_Has_Result_Chemical_Or_Drug terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2018,10 +2014,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R66 - name: Chemical_Or_Drug_Plays_Role_In_Biological_Process + code: R30 + name: Biological_Process_Has_Associated_Location terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2047,10 +2043,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R173 - name: Cytogenetic_Abnormality_Involves_Chromosome + code: R31 + name: Biological_Process_Has_Result_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2076,10 +2072,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R28 - name: Biological_Process_Has_Initiator_Process + code: R32 + name: Biological_Process_Has_Initiator_Chemical_Or_Drug terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2105,10 +2101,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R35 - name: Biological_Process_Is_Part_Of_Process + code: R34 + name: Biological_Process_Has_Result_Biological_Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2134,10 +2130,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R113 - name: Disease_May_Have_Abnormal_Cell + code: R35 + name: Biological_Process_Is_Part_Of_Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2163,10 +2159,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R102 - name: Disease_Has_Metastatic_Anatomic_Site + code: R36 + name: Gene_Is_Biomarker_Type terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2192,10 +2188,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R112 - name: Disease_May_Have_Normal_Cell_Origin + code: R38 + name: Gene_Associated_With_Disease terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2221,10 +2217,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R34 - name: Biological_Process_Has_Result_Biological_Process + code: R39 + name: Gene_Is_Biomarker_Of terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2250,10 +2246,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R153 - name: Allele_Has_Abnormality + code: R41 + name: Gene_Found_In_Organism terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2279,10 +2275,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R136 - name: Disease_Excludes_Metastatic_Anatomic_Site + code: R42 + name: Gene_Product_Is_Biomarker_Type terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2308,10 +2304,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R166 - name: Procedure_May_Have_Excised_Anatomy + code: R44 + name: Gene_Product_Has_Chemical_Classification terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2337,10 +2333,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R168 - name: Procedure_May_Have_Partially_Excised_Anatomy + code: R45 + name: Gene_Product_Has_Organism_Source terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2366,10 +2362,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R170 - name: Procedure_May_Have_Completely_Excised_Anatomy + code: R46 + name: Gene_Product_Has_Associated_Anatomy terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2395,10 +2391,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R36 - name: Gene_Is_Biomarker_Type + code: R47 + name: Gene_Product_Is_Biomarker_Of terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2424,10 +2420,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R31 - name: Biological_Process_Has_Result_Anatomy + code: R48 + name: Gene_Product_Malfunction_Associated_With_Disease terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2453,10 +2449,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R29 - name: Biological_Process_Has_Result_Chemical_Or_Drug + code: R49 + name: Gene_Product_Expressed_In_Tissue terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2482,10 +2478,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R150 - name: Chemical_Or_Drug_Affects_Abnormal_Cell + code: R50 + name: Gene_Product_Has_Structural_Domain_Or_Motif terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2511,10 +2507,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R111 - name: Disease_May_Have_Normal_Tissue_Origin + code: R51 + name: Gene_Product_Is_Physical_Part_Of terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2540,10 +2536,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R39 - name: Gene_Is_Biomarker_Of + code: R52 + name: Gene_Product_Has_Biochemical_Function terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2569,10 +2565,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R23 - name: EO_Disease_Has_Associated_Cell_Type + code: R53 + name: Gene_Product_Plays_Role_In_Biological_Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2598,10 +2594,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R145 - name: Gene_Has_Physical_Location + code: R54 + name: Gene_Product_Encoded_By_Gene terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2627,10 +2623,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R165 - name: Procedure_Has_Imaged_Anatomy + code: R66 + name: Chemical_Or_Drug_Plays_Role_In_Biological_Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2656,10 +2652,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R159 - name: Allele_Has_Activity + code: R72 + name: Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2685,10 +2681,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R158 - name: Allele_Plays_Altered_Role_In_Process + code: R81 + name: Anatomic_Structure_Has_Location terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2714,10 +2710,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R160 - name: Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug + code: R88 + name: Disease_Is_Stage terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2743,10 +2739,10 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR }, class Concept { uri: null ct: null - code: R156 - name: Allele_Absent_From_Wild-type_Chromosomal_Location + code: R89 + name: Disease_May_Have_Molecular_Abnormality terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -2773,12 +2769,14 @@ MetadataEndpointsApiTest > getRolesTest() STANDARD_ERROR MetadataEndpointsApiTest > getRolesTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-sparql-bindings.txt b/java-examples/samples/get-sparql-bindings.txt index 6b6c9f78..870930f7 100644 --- a/java-examples/samples/get-sparql-bindings.txt +++ b/java-examples/samples/get-sparql-bindings.txt @@ -8,16 +8,12 @@ > Task :test -Gradle Test Executor 135 STANDARD_ERROR - Mar 24, 2025 4:40:57 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 17 tests were Method or class mismatch - SearchEndpointApiTest > getSPARQLBindingsTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - Get SPARQL binding results from query = SELECT ?code ?x { GRAPH { ?x a owl:Class . ?x :NHC0 ?code . } } [Test worker] INFO gov.nih.nci.evs.api.SearchEndpointApiTest - search results = class MapResultList { uri: null ct: null - total: 198932 + total: 207393 timeTaken: null parameters: class SearchCriteria { uri: null @@ -42,17 +38,19 @@ SearchEndpointApiTest > getSPARQLBindingsTest() STANDARD_ERROR terminology: [] sparql: SELECT ?code ?x { GRAPH { ?x a owl:Class . ?x :NHC0 ?code . } } } - results: [{code=C7057, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C7057}, {code=C12219, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12219}, {code=C12913, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12913}, {code=C3910, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C3910}, {code=C20189, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C20189}, {code=C1908, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C1908}, {code=C26548, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C26548}, {code=C12218, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12218}, {code=C17828, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17828}, {code=C16612, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16612}] + results: [{code=C12219, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12219}, {code=C7057, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C7057}, {code=C12913, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12913}, {code=C3910, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C3910}, {code=C20189, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C20189}, {code=C1908, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C1908}, {code=C26548, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C26548}, {code=C12218, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12218}, {code=C17828, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17828}, {code=C16612, x=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16612}] } SearchEndpointApiTest > getSPARQLBindingsTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 3s +BUILD SUCCESSFUL in 7s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-subset-members-by-code.txt b/java-examples/samples/get-subset-members-by-code.txt index 1cb15df1..dcb85872 100644 --- a/java-examples/samples/get-subset-members-by-code.txt +++ b/java-examples/samples/get-subset-members-by-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 128 STANDARD_ERROR - Mar 24, 2025 4:40:32 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 2 tests were Method or class mismatch - SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.SubsetEndpointsApiTest - Get subset members for code - C157225 [Test worker] INFO gov.nih.nci.evs.api.SubsetEndpointsApiTest - subset members = [class Concept { @@ -20,7 +16,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C16255 name: Acetylation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -49,7 +45,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157214 name: Acylation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -78,7 +74,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157206 name: Adsorption terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -107,7 +103,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157210 name: Amidation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -136,7 +132,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157220 name: Antigen Cultivation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -165,7 +161,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C61471 name: Attenuation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -194,7 +190,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C41544 name: Catabolic Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -223,7 +219,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157211 name: Cell Expansion terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -252,7 +248,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C40483 name: Chelating Activity terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -281,7 +277,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C164238 name: Chemical Attenuation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -310,7 +306,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C175901 name: Chemical Inactivation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -339,7 +335,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157200 name: Cold Adaptation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -368,7 +364,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157201 name: Combustion terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -397,7 +393,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157202 name: Conjugation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -426,7 +422,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C164241 name: Cross-Linked Chemical Connection Points terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -455,7 +451,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C166360 name: Crosslinking Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -484,7 +480,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157198 name: Depolymerization terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -513,7 +509,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157215 name: Epoxidation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -542,7 +538,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157216 name: Esterification terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -571,7 +567,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C61575 name: Extraction terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -600,7 +596,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157204 name: Fermentation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -629,7 +625,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C21049 name: Gene Expression Process terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -658,7 +654,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C28009 name: Hydration terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -687,7 +683,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C157199 name: Hydrogenation terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -716,7 +712,7 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR code: C16702 name: Hydrolysis terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -743,12 +739,14 @@ SubsetEndpointsApiTest > getSubsetMembersTest() STANDARD_ERROR SubsetEndpointsApiTest > getSubsetMembersTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 4s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-subset-members-for-code.txt b/java-examples/samples/get-subset-members-for-code.txt new file mode 100644 index 00000000..66a73bed --- /dev/null +++ b/java-examples/samples/get-subset-members-for-code.txt @@ -0,0 +1,114 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getSubsetMembers1Test() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get subset members for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - subset members = [class Concept { + uri: null + ct: null + code: C178243 + name: Family Cancer History Relative Primary Diagnosis Question + terminology: ncit + version: 25.10d + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: DEFAULT + source: null + leaf: true + active: true + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [] + maps: [] + paths: null + }, class Concept { + uri: null + ct: null + code: C176985 + name: Histology ICD-O Morphology Code + terminology: ncit + version: 25.10d + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: DEFAULT + source: null + leaf: true + active: true + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [] + maps: [] + paths: null + }, class Concept { + uri: null + ct: null + code: C177621 + name: ICD-O-3 Morphology Term Diagnosis Question + terminology: ncit + version: 25.10d + level: null + highlight: null + subsetLink: null + mapsetLink: null + conceptStatus: DEFAULT + source: null + leaf: true + active: true + synonyms: [] + definitions: [] + properties: [] + children: [] + parents: [] + descendants: [] + associations: [] + inverseAssociations: [] + roles: [] + disjointWith: [] + inverseRoles: [] + history: [] + maps: [] + paths: null + }] + +ConceptEndpointsApiTest > getSubsetMembers1Test() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-subtree-children.txt b/java-examples/samples/get-subtree-children.txt new file mode 100644 index 00000000..7477539d --- /dev/null +++ b/java-examples/samples/get-subtree-children.txt @@ -0,0 +1,198 @@ +> Task :compileJava UP-TO-DATE +> Task :processResources UP-TO-DATE +> Task :classes UP-TO-DATE +> Task :cleanTest +> Task :compileTestJava UP-TO-DATE +> Task :processTestResources NO-SOURCE +> Task :testClasses UP-TO-DATE + +> Task :test + +ConceptEndpointsApiTest > getSubtreeChildrenTest() STANDARD_ERROR + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get all subtree children for code - C3224 + [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - subtree children = [class HierarchyNode { + uri: null + ct: null + code: C3802 + label: Amelanotic Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C8410 + label: Breast Melanoma + level: null + leaf: true + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C131506 + label: Childhood Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C3510 + label: Cutaneous Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C4236 + label: Epithelioid Cell Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C217198 + label: Localized Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C215044 + label: Melanoma In Situ + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C8925 + label: Metastatic Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C66756 + label: Mixed Epithelioid and Spindle Cell Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C205125 + label: Nodular Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C8711 + label: Non-Cutaneous Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C118828 + label: Orbital Melanoma + level: null + leaf: true + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C162547 + label: Penile Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C7087 + label: Recurrent Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C147983 + label: Refractory Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C4228 + label: Regressing Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C190239 + label: Resectable Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C4237 + label: Spindle Cell Melanoma + level: null + leaf: false + expanded: null + children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C148517 + label: Unresectable Melanoma + level: null + leaf: false + expanded: null + children: [] + }] + +ConceptEndpointsApiTest > getSubtreeChildrenTest() PASSED + +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. + +You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. + +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. + +BUILD SUCCESSFUL in 2s +5 actionable tasks: 2 executed, 3 up-to-date + diff --git a/java-examples/samples/get-subtree.txt b/java-examples/samples/get-subtree.txt index 1588c26f..28679979 100644 --- a/java-examples/samples/get-subtree.txt +++ b/java-examples/samples/get-subtree.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 108 STANDARD_ERROR - Mar 24, 2025 4:39:26 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 22 tests were Method or class mismatch - ConceptEndpointsApiTest > getSubtreeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - Get the entire subtree from the root node of code - C3224 [Test worker] INFO gov.nih.nci.evs.api.ConceptEndpointsApiTest - subtree = [class HierarchyNode { @@ -459,6 +455,15 @@ ConceptEndpointsApiTest > getSubtreeTest() STANDARD_ERROR leaf: false expanded: null children: [] + }, class HierarchyNode { + uri: null + ct: null + code: C2947 + label: Chordoma + level: null + leaf: false + expanded: null + children: [] }, class HierarchyNode { uri: null ct: null @@ -848,16 +853,7 @@ ConceptEndpointsApiTest > getSubtreeTest() STANDARD_ERROR children: [] }, class HierarchyNode { uri: null - ct: null - code: C84270 - label: Myeloid/Lymphoid Neoplasms with Eosinophilia and Tyrosine Kinase Gene Fusions - level: null - leaf: false - expanded: null - children: [] - }, class HierarchyNode { - uri: null - ct: 71 + ct: 72 code: null label: null level: null @@ -1260,12 +1256,14 @@ ConceptEndpointsApiTest > getSubtreeTest() STANDARD_ERROR ConceptEndpointsApiTest > getSubtreeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-synonym-sources.txt b/java-examples/samples/get-synonym-sources.txt index 77bb26e8..fab17ced 100644 --- a/java-examples/samples/get-synonym-sources.txt +++ b/java-examples/samples/get-synonym-sources.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 99 STANDARD_ERROR - Mar 24, 2025 4:38:57 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all synonyms for ncit [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - synonyms = [class ConceptMinimal { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: ACC/AHA name: American College of Cardiology / American Heart Association terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -28,7 +24,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: BIOCARTA name: BioCarta online maps of molecular pathways, adapted for NCI use terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -36,7 +32,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: BRIDG name: Biomedical Research Integrated Domain Model Group terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -44,7 +40,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: BRIDG 3.0.3 name: Biomedical Research Integrated Domain Model Group, version 3.0.3 terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -52,7 +48,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: BRIDG 5.3 name: Biomedical Research Integrated Domain Model Group, version 5.3 terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -60,7 +56,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CBDD name: Chemical Biology and Drug Development terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -68,7 +64,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CCPS name: Childhood Cancer Predisposition Study terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -76,7 +72,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CDC name: U.S. Centers for Disease Control and Prevention terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -84,7 +80,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CDISC name: Clinical Data Interchange Standards Consortium terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -92,7 +88,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CDISC-GLOSS name: CDISC Glossary Terminology terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -100,7 +96,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CPTAC name: Clinical Proteomic Tumor Analysis Consortium terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -108,7 +104,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CRCH name: Cancer Research Center of Hawaii Nutrition Terminology terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -116,7 +112,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CTCAE name: Common Terminology Criteria for Adverse Events terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -124,7 +120,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CTCAE 3.0 name: Common Terminology Criteria for Adverse Events, version 3.0 terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -132,7 +128,15 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CTCAE 5.0 name: Common Terminology Criteria for Adverse Events, version 5.0 terminology: ncit - version: 25.02d + version: 25.10d + level: null + }, class ConceptMinimal { + uri: null + ct: null + code: CTCAE 6.0 + name: Common Terminology Criteria for Adverse Events, version 6.0 + terminology: ncit + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -140,7 +144,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CTDC name: Clinical Trials Data Commons terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -148,7 +152,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CTEP name: Cancer Therapy Evaluation Program terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -156,7 +160,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CTRP name: Clinical Trials Reporting Program terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -164,7 +168,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: CareLex name: CareLex electronic Trial Master File Terminology terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -172,7 +176,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: Cellosaurus name: Cellosaurus - a knowledge resource on cell lines terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -180,7 +184,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: DCP name: NCI Division of Cancer Prevention Program terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -188,7 +192,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: DICOM name: Digital Imaging Communications in Medicine terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -196,7 +200,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: DIPG/DMG name: Diffuse Intrinsic Pontine Glioma/Diffuse Midline Glioma terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -204,7 +208,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: DTP name: NCI Developmental Therapeutics Program terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -212,7 +216,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: EDQM-HC name: European Directorate for the Quality of Medicines & Healthcare terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -220,7 +224,15 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: FDA name: U.S. Food and Drug Administration terminology: ncit - version: 25.02d + version: 25.10d + level: null + }, class ConceptMinimal { + uri: null + ct: null + code: FDA-NIH-MoRE + name: FDA-NIH-Modernizing Research and Evidence + terminology: ncit + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -228,7 +240,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: GAIA name: Global Alignment of Immunization safety Assessment in pregnancy Terminology terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -236,7 +248,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: GDC name: Genomic Data Commons terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -244,7 +256,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: GENC name: Geopolitical Entities, Names, and Codes Terminology terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -252,7 +264,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: HGNC name: HUGO Gene Nomenclature Committee terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -260,7 +272,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: HL7 name: Health Level Seven International terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -268,7 +280,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: HemOnc name: HemOnc.org (A Free Hematology/Oncology Reference) terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -276,7 +288,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: ICD-10 name: International Classification of Diseases, Tenth Revision terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -284,7 +296,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: ICDC name: International Cancer Genome Consortium terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -292,7 +304,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: ICH name: International Conference on Harmonization terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -300,7 +312,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: INC name: International Neonatal Consortium terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -308,7 +320,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: JAX name: Jackson Laboratories Mouse Terminology, adapted for NCI use terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -316,15 +328,15 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: KEGG name: KEGG Pathway Database terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null ct: null code: MRCT-Ctr - name: null + name: MRCT Center Clinical Research Plain Language Glossary at Harvard and Brigham and Women's Hospital terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -332,7 +344,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: NCI name: National Cancer Institute Thesaurus terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -340,7 +352,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: NCI-GLOSS name: NCI Dictionary of Cancer Terms terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -348,7 +360,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: NCPDP name: National Council for Prescription Drug Programs terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -356,7 +368,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: NDC name: National Drug Code terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -364,7 +376,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: NICHD name: National Institute of Child Health and Human Development terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -372,7 +384,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: OORO name: Operational Ontology for Radiation Oncology terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -380,7 +392,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: ORCHESTRA name: Multinational project funded by the European Commission to advance the knowledge of the SARS-CoV-2 infection and its long-term effects terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -388,7 +400,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: PCDC name: Pediatric Cancer Data Commons terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -396,7 +408,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: PI-RADS name: Prostate Imaging-Reporting and Data System terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -404,7 +416,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: PID name: NCI Nature Pathway Interaction Database terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -412,7 +424,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: PRO-CTCAE name: PRO-CTCAE (Patient Reported Outcomes version of Common Terminology Criteria for Adverse Events) terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -420,7 +432,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: RENI name: Registry Nomenclature Information System terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -428,7 +440,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: SEER name: Surveillance, Epidemiology, and End Results Program terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -436,7 +448,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: SeroNet name: NCI Serological Sciences Network for COVID-19 terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -444,7 +456,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: UBERON name: Uber-anatomy Ontology terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -452,7 +464,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: UCUM name: Unified Code for Units of Measure terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -460,7 +472,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: WHO name: World Health Organization terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -468,7 +480,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: ZFin name: Zebrafish Information Network terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -476,7 +488,7 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: caDSR name: Cancer Data Standards Registry and Repository terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -484,17 +496,19 @@ MetadataEndpointsApiTest > getSynonymSourcesTest() STANDARD_ERROR code: mCode name: Minimal Common Oncology Data Elements terminology: ncit - version: 25.02d + version: 25.10d level: null }] MetadataEndpointsApiTest > getSynonymSourcesTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-synonym-type-by-code.txt b/java-examples/samples/get-synonym-type-by-code.txt index 783d913c..d2bcb4b9 100644 --- a/java-examples/samples/get-synonym-type-by-code.txt +++ b/java-examples/samples/get-synonym-type-by-code.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 103 STANDARD_ERROR - Mar 24, 2025 4:39:10 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getSynonymTypeByCodeTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get synonym for code/name - P90 [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - synonym = class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getSynonymTypeByCodeTest() STANDARD_ERROR code: P90 name: FULL_SYN terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -47,11 +43,13 @@ MetadataEndpointsApiTest > getSynonymTypeByCodeTest() STANDARD_ERROR MetadataEndpointsApiTest > getSynonymTypeByCodeTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-synonym-types.txt b/java-examples/samples/get-synonym-types.txt index a52d680b..39502b84 100644 --- a/java-examples/samples/get-synonym-types.txt +++ b/java-examples/samples/get-synonym-types.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 102 STANDARD_ERROR - Mar 24, 2025 4:39:07 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getSynonymTypesTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all synonym types for ncit [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - synonym types = [class Concept { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getSynonymTypesTest() STANDARD_ERROR code: P107 name: Display_Name terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -113,7 +109,7 @@ MetadataEndpointsApiTest > getSynonymTypesTest() STANDARD_ERROR code: P108 name: Preferred_Name terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -218,7 +214,7 @@ MetadataEndpointsApiTest > getSynonymTypesTest() STANDARD_ERROR code: P90 name: FULL_SYN terminology: ncit - version: 25.02d + version: 25.10d level: null highlight: null subsetLink: null @@ -309,11 +305,13 @@ MetadataEndpointsApiTest > getSynonymTypesTest() STANDARD_ERROR MetadataEndpointsApiTest > getSynonymTypesTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. BUILD SUCCESSFUL in 2s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/samples/get-term-types.txt b/java-examples/samples/get-term-types.txt index c3edad04..04aa1194 100644 --- a/java-examples/samples/get-term-types.txt +++ b/java-examples/samples/get-term-types.txt @@ -8,10 +8,6 @@ > Task :test -Gradle Test Executor 98 STANDARD_ERROR - Mar 24, 2025 4:38:54 PM org.junit.platform.launcher.core.EngineDiscoveryOrchestrator lambda$logTestDescriptorExclusionReasons$7 - INFO: 0 containers and 20 tests were Method or class mismatch - MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - Get all term types for ncit [Test worker] INFO gov.nih.nci.evs.api.MetadataEndpointsApiTest - term types = [class ConceptMinimal { @@ -20,7 +16,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: AB name: Abbreviation terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -28,7 +24,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: AD name: Adjectival form (and other parts of grammar) terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -36,7 +32,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: AQ name: *Antiquated preferred term terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -44,7 +40,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: AQS name: Antiquated term, use when there are antiquated synonyms within a concept terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -52,7 +48,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: BR name: US brand name, which may be trademarked terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -60,7 +56,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: CA2 name: ISO 3166 alpha-2 country code terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -68,7 +64,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: CA3 name: ISO 3166 alpha-3 country code terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -76,7 +72,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: CI name: ISO country code terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -84,7 +80,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: CN name: Drug study code terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -92,7 +88,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: CNU name: ISO 3166 numeric country code terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -100,7 +96,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: CS name: US State Department country code terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -108,7 +104,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: DN name: Display name terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -116,7 +112,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: FB name: Foreign brand name, which may be trademarked terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -124,7 +120,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: HD name: *Header (groups concepts, but not used for coding data) terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -132,7 +128,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: HT name: Hierarchical term terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -140,7 +136,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: LLT name: Lower level term terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -148,7 +144,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: PT name: *Preferred term terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -156,7 +152,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: RT name: Related term terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -164,7 +160,7 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: SN name: Chemical structure name terminology: ncit - version: 25.02d + version: 25.10d level: null }, class ConceptMinimal { uri: null @@ -172,18 +168,20 @@ MetadataEndpointsApiTest > getTermTypesTest() STANDARD_ERROR code: SY name: Synonym terminology: ncit - version: 25.02d + version: 25.10d level: null }] MetadataEndpointsApiTest > getTermTypesTest() PASSED -Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. +[Incubating] Problems report is available at: file:///D:/WCI/Repos/evsrestapi-client-SDK/java-examples/build/reports/problems/problems-report.html + +Deprecated Gradle features were used in this build, making it incompatible with Gradle 9.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. -See https://docs.gradle.org/7.3/userguide/command_line_interface.html#sec:command_line_warnings +For more on this, please refer to https://docs.gradle.org/8.14.2/userguide/command_line_interface.html#sec:command_line_warnings in the Gradle documentation. -BUILD SUCCESSFUL in 2s +BUILD SUCCESSFUL in 3s 5 actionable tasks: 2 executed, 3 up-to-date diff --git a/java-examples/src/test/java/gov/nih/nci/evs/api/MetadataEndpointsApiTest.java b/java-examples/src/test/java/gov/nih/nci/evs/api/MetadataEndpointsApiTest.java index a93457bd..d58ae76d 100644 --- a/java-examples/src/test/java/gov/nih/nci/evs/api/MetadataEndpointsApiTest.java +++ b/java-examples/src/test/java/gov/nih/nci/evs/api/MetadataEndpointsApiTest.java @@ -12,18 +12,22 @@ package gov.nih.nci.evs.api; -import gov.nih.nci.evs.api.invoker.ApiException; -import gov.nih.nci.evs.api.model.Concept; -import gov.nih.nci.evs.api.model.ConceptMinimal; -import gov.nih.nci.evs.api.model.Terminology; import java.util.List; + +import static org.junit.jupiter.api.Assertions.assertEquals; +import static org.junit.jupiter.api.Assertions.assertFalse; +import static org.junit.jupiter.api.Assertions.assertNotNull; +import static org.junit.jupiter.api.Assertions.assertTrue; import org.junit.jupiter.api.BeforeAll; import org.junit.jupiter.api.Disabled; import org.junit.jupiter.api.Test; import org.slf4j.Logger; import org.slf4j.LoggerFactory; -import static org.junit.jupiter.api.Assertions.*; +import gov.nih.nci.evs.api.invoker.ApiException; +import gov.nih.nci.evs.api.model.Concept; +import gov.nih.nci.evs.api.model.ConceptMinimal; +import gov.nih.nci.evs.api.model.Terminology; /** * API tests for MetadataEndpointsApi. These tests will demonstrate how to call the API and log the @@ -110,7 +114,7 @@ public void getConceptStatusesTest() throws ApiException { // ASSERT assertFalse(response.isEmpty()); assertEquals(5, response.size()); - assertEquals("Obsolete_Concept", response.get(0)); + assertEquals("Header_Concept", response.get(0)); // LOG log.info("Get all statuses associated with terminology - ncit"); @@ -316,8 +320,8 @@ public void getQualifiersTest() throws ApiException { // ASSERT assertFalse(response.isEmpty()); - assertEquals("P383", response.get(0).getCode()); - assertEquals("P384", response.get(1).getCode()); + assertEquals("P378", response.get(0).getCode()); + assertEquals("P381", response.get(1).getCode()); // LOG log.info("Get all qualifiers for ncit"); diff --git a/java-examples/src/test/java/gov/nih/nci/evs/api/SearchEndpointApiTest.java b/java-examples/src/test/java/gov/nih/nci/evs/api/SearchEndpointApiTest.java index 40eae0f0..77721cef 100644 --- a/java-examples/src/test/java/gov/nih/nci/evs/api/SearchEndpointApiTest.java +++ b/java-examples/src/test/java/gov/nih/nci/evs/api/SearchEndpointApiTest.java @@ -12,15 +12,17 @@ package gov.nih.nci.evs.api; -import gov.nih.nci.evs.api.invoker.ApiException; -import gov.nih.nci.evs.api.model.ConceptResultList; -import gov.nih.nci.evs.api.model.MapResultList; +import static org.junit.jupiter.api.Assertions.assertEquals; +import static org.junit.jupiter.api.Assertions.assertNotNull; +import static org.junit.jupiter.api.Assertions.assertTrue; import org.junit.jupiter.api.BeforeAll; import org.junit.jupiter.api.Test; import org.slf4j.Logger; import org.slf4j.LoggerFactory; -import static org.junit.jupiter.api.Assertions.*; +import gov.nih.nci.evs.api.invoker.ApiException; +import gov.nih.nci.evs.api.model.ConceptResultList; +import gov.nih.nci.evs.api.model.MapResultList; /** * API tests for SearchEndpointApi. These tests will demonstrate how to call the API and log the @@ -93,7 +95,7 @@ public void searchTest() throws ApiException { assertNotNull(response); assertNotNull(response.getConcepts()); assertNotNull(response.getConcepts().get(0)); - assertEquals("C1000", response.getConcepts().get(0).getCode()); + assertEquals("C100001", response.getConcepts().get(0).getCode()); // LOG log.info("Get search results from NCIT for - " + terminology); @@ -237,7 +239,7 @@ public void searchFilterByDefinitionTypeTest() throws ApiException { // ASSERT assertNotNull(response); - assertEquals(1462, response.getTotal()); + assertEquals(1568, response.getTotal()); assertNotNull(response.getConcepts()); assertNotNull(response.getConcepts().get(0)); @@ -632,7 +634,7 @@ public void searchByTypeANDTest() throws ApiException { // ASSERT assertNotNull(response); - assertEquals(150, response.getTotal()); + assertEquals(151, response.getTotal()); assertNotNull(response.getConcepts()); assertNotNull(response.getConcepts().get(0)); @@ -821,7 +823,7 @@ public void searchConceptsByPropertyTest() throws ApiException { // ASSERT assertNotNull(response); - assertEquals(35, response.getTotal()); + assertEquals(36, response.getTotal()); assertNotNull(response.getConcepts()); assertNotNull(response.getConcepts().get(0)); diff --git a/postman-examples/README.md b/postman-examples/README.md index 92c4a3f9..813b1f68 100644 --- a/postman-examples/README.md +++ b/postman-examples/README.md @@ -10,6 +10,23 @@ This tutorial shows how to use a Postman collection to access NCI Thesaurus cont - It is currently set to `https://api-evsrest.nci.nih.gov/api/v1` +## Running the Postman Script + +A convenience script is included to help run the Postman collection using Newman. + +- Script: `postman.sh` (located in this directory) +- Usage: + ```bash + cd postman-examples + ./postman.sh + ``` +- To override the default API URL (the script uses a production default), set the `API_URL` environment variable before running the script: + ```bash + export API_URL=https://api-test-evsrest.nci.nih.gov + ./postman.sh + ``` +- Requirements: `newman` (npm). The script will attempt to install `newman` if it is not found. + ## Sample Postman Calls When the collection is loaded into Postman, you will see a number diff --git a/postman-examples/postman.sh b/postman-examples/postman.sh new file mode 100644 index 00000000..9d09695b --- /dev/null +++ b/postman-examples/postman.sh @@ -0,0 +1,60 @@ +#!/bin/bash + +# Bash script to run a Postman collection with a dynamically calculated API_URL + +# TODO: Calculate or fetch the API_URL +# Replace this local URL with the actual method to determine API_URL. +# API_URL="http://localhost:8082/api/v1" # local URL; update as needed. +API_URL="https://api-evsrest.nci.nih.gov" # Prod API_URL +# API_URL="https://api-test-evsrest.nci.nih.gov" # Test API_URL +# API_URL="https://api-qa-evsrest.nci.nih.gov" # QA API_URL + +# Ensure API_URL is set in the environment +if [ -z "$API_URL" ]; then + echo "Error: API_URL is not set. Please export API_URL before running this script." + exit 1 +fi + +# Construct the collection file name +COLLECTION_FILE="EVSRESTAPI-Postman-Client.json" + +# Check if the collection file exists +if [ ! -f "$COLLECTION_FILE" ]; then + echo "Warning: Collection file '$COLLECTION_FILE' does not exist." + exit 0 +fi + +# Verify if newman is installed +if ! command -v newman &> /dev/null; then + echo "Newman is not installed. Attempting to install it locally..." + # Try installing Newman globally + # Newman site suggests global install over local + npm install -g newman + if [ $? -ne 0 ]; then + echo "Error: Newman installation failed. Please install it manually." + exit 1 + fi + + # Verify if Newman is installed correctly + if ! command -v newman &> /dev/null; then + echo "Error: Newman is still not recognized after installation." + echo "Please try installing it manually using the following command:" + echo "npm install -g newman" + exit 1 + fi +fi + +# Run the Postman collection using newman and track the exit status +echo "Running the Postman collection with API_URL=$API_URL..." + +newman run "$COLLECTION_FILE" --global-var "API_URL=$API_URL" +newman_status=$? + +# Check if newman run succeeded +if [ $newman_status -eq 0 ]; then + echo "Postman collection ran successfully." + exit 0 +else + echo "Error: Postman collection failed with status code $newman_status." + exit $newman_status +fi \ No newline at end of file diff --git a/python-examples/README.md b/python-examples/README.md index dc584534..4b525bf2 100644 --- a/python-examples/README.md +++ b/python-examples/README.md @@ -19,6 +19,21 @@ ones shown. The various scripts make use of the `config.ini` file to load necessary information that is uniform across all tests. +## Running the README pytest runner (python_check.py) + +This directory includes a small helper script that parses this `README.md` for backticked pytest commands and executes them with your Python interpreter. + +- Script: `python_check.py` (located in this directory) +- Usage: + ```bash + cd python-examples + python python_check.py + ``` +- Requirements: + - Ensure `pytest` is installed in your current Python environment: `pip install pytest`. + - Project dependencies: `pip install -r requirements.txt`. +- Output: The script runs the pytest commands it finds in this README and reports which executed successfully (and which did not). + ## Sample Python Calls The following examples are exhibited by various unit tests defined in the code in `python-examples`. @@ -31,6 +46,17 @@ All commands to run these tests should be run from that directory. * [Get concept by code (full information)](#get-concept-by-code-full-information) * [Get concept by code (custom include)](#get-concept-by-code-custom-include) * [Get concept part](#get-concept-part) +* [Get association entries for code (association entries)](#get-association-entries) +* [Get associations for code](#get-associations-for-code) +* [Get disjoint with for code](#get-disjoint-with) +* [Get history for code](#get-history-for-code) +* [Get inverse associations for code](#get-inverse-associations) +* [Get inverse roles for code](#get-inverse-roles) +* [Get maps for code](#get-maps-for-code) +* [Get parents for code](#get-parents) +* [Get roles for code](#get-roles-for-code) +* [Get subset members for subset code](#get-subset-members-by-code) +* [Get subtree children for code](#get-subtree-children) * [Get concept descendants](#get-concept-descendants) * [Get all properties](#get-all-properties) * [Get property by code (or label)](#get-property-by-code-or-label) @@ -40,6 +66,7 @@ All commands to run these tests should be run from that directory. * [Get all roles](#get-all-roles) * [Get role by code (or label)](#get-roles-by-code-or-label) * [Get all associations](#get-all-associations) +* [Get all concept statuses](#get-concept-statuses) * [Get association by code (or label)](#get-associations-by-code-or-label) * [Get all term types](#get-all-term-types) * [Get all synonym sources](#get-all-synonym-sources) @@ -173,6 +200,149 @@ inverseAssociations, maps. [Back to Top](#evsrestapi-client-sdk-python-tutorial) +### Get association entries for code (association entries) + +Return the association entries for a specified terminology and code/label. Associations used to define subset membership are not resolved by this call. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_association_entries` + +``` +2025-11-04T16:40:04.003 INFO : Get association entries for code/label - A5 +2025-11-04T16:40:04.004 INFO : association entries = uri=None ct=None total=2556 time_taken=118 parameters=SearchCriteria(uri=None, ct=None, term=None, type='contains', include='minimal', sort=None, ascending=None, from_record=0, page_size=100, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit', 'Has_Salt_Or_Ester_Form', '0', '100'], sparql=None) association_entries=[AssociationEntry(uri=None, ct=None, code='C80580', type=None, related_code='C80581', related_name='Fedotozine Tartrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Fedotozine'), AssociationEntry(uri=None, ct=None, code='C80583', type=None, related_code='C101535', related_name='Ketobemidone Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Ketobemidone'), AssociationEntry(uri=None, ct=None, code='C80585', type=None, related_code='C80586', related_name='Nalfurafine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Nalfurafine'), AssociationEntry(uri=None, ct=None, code='C80589', type=None, related_code='C61103', related_name='Noscapine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Noscapine'), AssociationEntry(uri=None, ct=None, code='C80592', type=None, related_code='C76856', related_name='Piridicillin Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Piridicillin'), AssociationEntry(uri=None, ct=None, code='C80560', type=None, related_code='C81931', related_name='Lofemizole Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Lofemizole'), AssociationEntry(uri=None, ct=None, code='C80570', type=None, related_code='C80587', related_name='Quadazocine Mesylate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Quadazocine'), AssociationEntry(uri=None, ct=None, code='C80574', type=None, related_code='C77280', related_name='Carfentanil Citrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Carfentanil'), AssociationEntry(uri=None, ct=None, code='C80576', type=None, related_code='C80577', related_name='Enadoline Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Enadoline'), AssociationEntry(uri=None, ct=None, code='C80578', type=None, related_code='C83705', related_name='Etorphine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Etorphine'), AssociationEntry(uri=None, ct=None, code='C80579', type=None, related_code='C81387', related_name='Faxeladol Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Faxeladol'), AssociationEntry(uri=None, ct=None, code='C80527', type=None, related_code='C80528', related_name='Sofinicline Benzenesulfonate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Sofinicline'), AssociationEntry(uri=None, ct=None, code='C80784', type=None, related_code='C80803', related_name='Estriol Sodium Succinate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Estriol Succinate'), AssociationEntry(uri=None, ct=None, code='C80792', type=None, related_code='C84591', related_name='Sulfabromomethazine Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Sulfabromomethazine'), AssociationEntry(uri=None, ct=None, code='C80765', type=None, related_code='C81081', related_name='Pardoprunox Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Pardoprunox'), AssociationEntry(uri=None, ct=None, code='C80770', type=None, related_code='C80771', related_name='Fonazine Mesylate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Fonazine'), AssociationEntry(uri=None, ct=None, code='C80772', type=None, related_code='C95285', related_name='Indisetron Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Indisetron'), AssociationEntry(uri=None, ct=None, code='C80775', type=None, related_code='C80763', related_name='Naluzotan Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Naluzotan'), AssociationEntry(uri=None, ct=None, code='C80801', type=None, related_code='C152244', related_name='Rolitetracycline Nitrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Rolitetracycline'), AssociationEntry(uri=None, ct=None, code='C80670', type=None, related_code='C81585', related_name='Clomacran Phosphate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Clomacran'), AssociationEntry(uri=None, ct=None, code='C80679', type=None, related_code='C80680', related_name='Lasofoxifene Tartrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Lasofoxifene'), AssociationEntry(uri=None, ct=None, code='C80629', type=None, related_code='C78123', related_name='Sugammadex Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Sugammadex'), AssociationEntry(uri=None, ct=None, code='C80630', type=None, related_code='C80631', related_name='Sotrastaurin Acetate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Sotrastaurin'), AssociationEntry(uri=None, ct=None, code='C80636', type=None, related_code='C403', related_name='Ancitabine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Ancitabine'), AssociationEntry(uri=None, ct=None, code='C80642', type=None, related_code='C76234', related_name='Tosufloxacin Tosylate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Tosufloxacin'), AssociationEntry(uri=None, ct=None, code='C203038', type=None, related_code='C213391', related_name='Opemalirsen Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Opemalirsen'), AssociationEntry(uri=None, ct=None, code='C203039', type=None, related_code='C203036', related_name='Sefaxersen Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Sefaxersen'), AssociationEntry(uri=None, ct=None, code='C203019', type=None, related_code='C179693', related_name='Emilumenib Succinate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Emilumenib'), AssociationEntry(uri=None, ct=None, code='C80153', type=None, related_code='C81016', related_name='Cocaine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Cocaine'), AssociationEntry(uri=None, ct=None, code='C203106', type=None, related_code='C203105', related_name='Olgotrelvir Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Olgotrelvir'), AssociationEntry(uri=None, ct=None, code='C203108', type=None, related_code='C216334', related_name='Crozbaciclib Fumarate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Crozbaciclib'), AssociationEntry(uri=None, ct=None, code='C203175', type=None, related_code='C216538', related_name='Bevemipretide Trihydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Bevemipretide'), AssociationEntry(uri=None, ct=None, code='C203143', type=None, related_code='C203138', related_name='Lepodisiran Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Lepodisiran'), AssociationEntry(uri=None, ct=None, code='C203134', type=None, related_code='C203141', related_name='Imdusiran Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Imdusiran'), AssociationEntry(uri=None, ct=None, code='C203136', type=None, related_code='C203144', related_name='Lefelsiran Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Lefelsiran'), AssociationEntry(uri=None, ct=None, code='C80063', type=None, related_code='C170287', related_name='Patidegib Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Patidegib'), AssociationEntry(uri=None, ct=None, code='C80086', type=None, related_code='C78763', related_name='Sodium 1,2-Ethanedisulfonate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='1,2-Ethanedisulfonic Acid'), AssociationEntry(uri=None, ct=None, code='C80089', type=None, related_code='C47948', related_name='Amrubicin Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Amrubicin'), AssociationEntry(uri=None, ct=None, code='C80094', type=None, related_code='C74049', related_name='Iobenguane Sulfate I-123', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Iobenguane I-123'), AssociationEntry(uri=None, ct=None, code='C80053', type=None, related_code='C91759', related_name='Eritoran Tetrasodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Eritoran'), AssociationEntry(uri=None, ct=None, code='C80059', type=None, related_code='C133238', related_name='Niraparib Tosylate Monohydrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Niraparib'), AssociationEntry(uri=None, ct=None, code='C80378', type=None, related_code='C48401', related_name='Retaspimycin Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Retaspimycin'), AssociationEntry(uri=None, ct=None, code='C119743', type=None, related_code='C141440', related_name='Uproleselan Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Uproleselan'), AssociationEntry(uri=None, ct=None, code='C80247', type=None, related_code='C216663', related_name='Almecillin Potassium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Almecillin'), AssociationEntry(uri=None, ct=None, code='C80247', type=None, related_code='C216651', related_name='Almecillin Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Almecillin'), AssociationEntry(uri=None, ct=None, code='C80257', type=None, related_code='C74356', related_name='Pralmorelin Dihydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Pralmorelin'), AssociationEntry(uri=None, ct=None, code='C130033', type=None, related_code='C216468', related_name='Vamotinib Mesylate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Vamotinib'), AssociationEntry(uri=None, ct=None, code='C217182', type=None, related_code='C98226', related_name='Cefotiam Hexetil Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Cefotiam Hexetil'), AssociationEntry(uri=None, ct=None, code='C217185', type=None, related_code='C47972', related_name='Chloramphenicol Sodium Succinate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Chloramphenicol Succinate'), AssociationEntry(uri=None, ct=None, code='C60809', type=None, related_code='C154440', related_name='Bosutinib Monohydrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Bosutinib'), AssociationEntry(uri=None, ct=None, code='C158093', type=None, related_code='C188255', related_name='Zeteletinib Adipate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Zeteletinib'), AssociationEntry(uri=None, ct=None, code='C158086', type=None, related_code='C174596', related_name='Pimodivir Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Pimodivir'), AssociationEntry(uri=None, ct=None, code='C158517', type=None, related_code='C199110', related_name='Sabizabulin Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Sabizabulin'), AssociationEntry(uri=None, ct=None, code='C60773', type=None, related_code='C29134', related_name='Isosorbide Dinitrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Isosorbide'), AssociationEntry(uri=None, ct=None, code='C60773', type=None, related_code='C47575', related_name='Isosorbide Mononitrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Isosorbide'), AssociationEntry(uri=None, ct=None, code='C60770', type=None, related_code='C62771', related_name='Obatoclax Mesylate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Obatoclax'), AssociationEntry(uri=None, ct=None, code='C217080', type=None, related_code='C152611', related_name='Ticarcillin Cresyl Sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Ticarcillin Cresyl'), AssociationEntry(uri=None, ct=None, code='C124995', type=None, related_code='C174591', related_name='Lifirafenib Maleate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Lifirafenib'), AssociationEntry(uri=None, ct=None, code='C217160', type=None, related_code='C153095', related_name='Epitinib Succinate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Epitinib'), AssociationEntry(uri=None, ct=None, code='C217162', type=None, related_code='C99130', related_name='Dociparstat sodium', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Dociparstat'), AssociationEntry(uri=None, ct=None, code='C217163', type=None, related_code='C65455', related_name='Dodeclonium Bromide', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Dodeclonium'), AssociationEntry(uri=None, ct=None, code='C74940', type=None, related_code='C1571', related_name='Alvocidib Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Alvocidib'), AssociationEntry(uri=None, ct=None, code='C150024', type=None, related_code='C167044', related_name='Ceftolozane Sulfate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Ceftolozane'), AssociationEntry(uri=None, ct=None, code='C74270', type=None, related_code='C77424', related_name='Histrelin Acetate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Histrelin'), AssociationEntry(uri=None, ct=None, code='C74265', type=None, related_code='C65661', related_name='Fenoxazoline Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Fenoxazoline'), AssociationEntry(uri=None, ct=None, code='C74261', type=None, related_code='C95604', related_name='Brovanexine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Brovanexine'), AssociationEntry(uri=None, ct=None, code='C74262', type=None, related_code='C78113', related_name='Ambroxol Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Ambroxol'), AssociationEntry(uri=None, ct=None, code='C74372', type=None, related_code='C80637', related_name='Clinafloxacin Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Clinafloxacin'), AssociationEntry(uri=None, ct=None, code='C74162', type=None, related_code='C66115', related_name='Methixene Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Methixene'), AssociationEntry(uri=None, ct=None, code='C74141', type=None, related_code='C47405', related_name='Atomoxetine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Atomoxetine'), AssociationEntry(uri=None, ct=None, code='C74198', type=None, related_code='C66496', related_name='Protokylol Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Protokylol'), AssociationEntry(uri=None, ct=None, code='C74199', type=None, related_code='C77154', related_name='Oxyfedrine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Oxyfedrine'), AssociationEntry(uri=None, ct=None, code='C74196', type=None, related_code='C47580', related_name='Levalbuterol Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Levalbuterol'), AssociationEntry(uri=None, ct=None, code='C74196', type=None, related_code='C83873', related_name='Levalbuterol Sulfate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Levalbuterol'), AssociationEntry(uri=None, ct=None, code='C74196', type=None, related_code='C66003', related_name='Levalbuterol Tartrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Levalbuterol'), AssociationEntry(uri=None, ct=None, code='C74191', type=None, related_code='C77259', related_name='Amperozide Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Amperozide'), AssociationEntry(uri=None, ct=None, code='C74193', type=None, related_code='C72795', related_name='Gepirone Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Gepirone'), AssociationEntry(uri=None, ct=None, code='C74188', type=None, related_code='C87494', related_name='Ecopipam Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Ecopipam'), AssociationEntry(uri=None, ct=None, code='C74202', type=None, related_code='C72782', related_name='Fingolimod Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Fingolimod'), AssociationEntry(uri=None, ct=None, code='C74240', type=None, related_code='C73829', related_name='Flubanilate Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Flubanilate'), AssociationEntry(uri=None, ct=None, code='C74241', type=None, related_code='C79962', related_name='Almitrine Mesylate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Almitrine'), AssociationEntry(uri=None, ct=None, code='C74226', type=None, related_code='C73828', related_name='Bencyclane Fumarate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Bencyclane'), AssociationEntry(uri=None, ct=None, code='C74547', type=None, related_code='C60779', related_name='Pazopanib Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Pazopanib'), AssociationEntry(uri=None, ct=None, code='C74599', type=None, related_code='C75202', related_name='Omoconazole Nitrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Omoconazole'), AssociationEntry(uri=None, ct=None, code='C150559', type=None, related_code='C142941', related_name='Avatrombopag Maleate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Avatrombopag'), AssociationEntry(uri=None, ct=None, code='C74393', type=None, related_code='C73841', related_name='Piboserod Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Piboserod'), AssociationEntry(uri=None, ct=None, code='C74394', type=None, related_code='C72813', related_name='Lecozotan Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Lecozotan'), AssociationEntry(uri=None, ct=None, code='C74391', type=None, related_code='C72812', related_name='Ipsapirone Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Ipsapirone'), AssociationEntry(uri=None, ct=None, code='C74389', type=None, related_code='C84140', related_name='Romifidine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Romifidine'), AssociationEntry(uri=None, ct=None, code='C74421', type=None, related_code='C72709', related_name='Azaclorzine Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Azaclorzine'), AssociationEntry(uri=None, ct=None, code='C74428', type=None, related_code='C65351', related_name='Conivaptan Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Conivaptan'), AssociationEntry(uri=None, ct=None, code='C88302', type=None, related_code='C162568', related_name='Infigratinib Mesylate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Infigratinib'), AssociationEntry(uri=None, ct=None, code='C88302', type=None, related_code='C175088', related_name='Infigratinib Phosphate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Infigratinib'), AssociationEntry(uri=None, ct=None, code='C88303', type=None, related_code='C170314', related_name='Pexidartinib Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Pexidartinib'), AssociationEntry(uri=None, ct=None, code='C88309', type=None, related_code='C188510', related_name='Motixafortide Acetate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Motixafortide'), AssociationEntry(uri=None, ct=None, code='C88311', type=None, related_code='C201546', related_name='Momelotinib Dihydrochloride Monohydrate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Momelotinib'), AssociationEntry(uri=None, ct=None, code='C88311', type=None, related_code='C170191', related_name='Momelotinib Dihydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Momelotinib'), AssociationEntry(uri=None, ct=None, code='C88314', type=None, related_code='C171761', related_name='Tepotinib Hydrochloride', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Tepotinib'), AssociationEntry(uri=None, ct=None, code='C88323', type=None, related_code='C130049', related_name='Burixafor Hydrobromide', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Burixafor'), AssociationEntry(uri=None, ct=None, code='C49094', type=None, related_code='C136891', related_name='Neratinib Maleate', source=None, highlight=None, qualifiers=None, terminology='ncit', version='25.10d', association='Has_Salt_Or_Ester_Form', name='Neratinib')] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get associations for code + +Return the associations for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_associations1` + +``` +2025-11-04T16:41:30.070 INFO : Get associations for code - C3224 +2025-11-04T16:41:30.071 INFO : associations = [Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C77526', related_name='CDISC SEND Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C88025', related_name='CDISC SEND Tumor Findings Results Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C165258', related_name='Cellosaurus Disease Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C61410', related_name='Clinical Data Interchange Standards Consortium Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C138188', related_name='Clinical Trials Search-Application Programming Interface Disease Category Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C156953', related_name='CPTAC Baseline Medical Forms Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C158520', related_name='CPTAC Codelists Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C159415', related_name='CPTAC Melanoma Baseline Form', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C156966', related_name='CPTAC Neoplasms Codelist', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C156952', related_name='CPTAC Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C157534', related_name='CPTAC Uveal Melanoma Baseline Form', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C118168', related_name='CTRP Disease Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C116977', related_name='CTRP Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C138190', related_name='CTS-API Disease Main Type Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Is_Value_For_GDC_Property', related_code='C178243', related_name='Family Cancer History Relative Primary Diagnosis Question', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C157711', related_name='GDC Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C177537', related_name='GDC Value Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Is_Value_For_GDC_Property', related_code='C176985', related_name='Histology ICD-O Morphology Code', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Is_Value_For_GDC_Property', related_code='C177621', related_name='ICD-O-3 Morphology Term Diagnosis Question', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168658', related_name='Mapped ICDO3.1 Morphology PT Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168657', related_name='Mapped ICDO3.1 Morphology Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168655', related_name='Mapped ICDO3.1 Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168662', related_name='Mapped ICDO3.2 Morphology PT Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168661', related_name='Mapped ICDO3.2 Morphology Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168656', related_name='Mapped ICDO3.2 Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C103113', related_name='NCI CTEP SDC Melanoma Sub-Category Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C102905', related_name='NCI CTEP Simplified Disease Classification Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C126659', related_name='NCIt Neoplasm Core Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C90259', related_name='NICHD Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C189762', related_name='Pediatric Adverse Events Terminology Mapped to MedDRA', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C118464', related_name='Pediatric Adverse Events Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Neoplasm_Has_Special_Category', related_code='C9292', related_name='Solid Neoplasm', source=None, highlight=None, qualifiers=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get disjoint with for code + +Return the disjoint-with entries for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_disjoint_with` + +``` +2025-11-04T16:42:31.714 INFO : Get list of disjoint with for code - C3910 +2025-11-04T16:42:31.714 INFO : disjoint with = [DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C12913', related_name='Abnormal Cell', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C12913', related_name='Abnormal Cell', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C43431', related_name='Activity', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C43431', related_name='Activity', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C12219', related_name='Anatomic Structure, System, or Substance', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C12219', related_name='Anatomic Structure, System, or Substance', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20633', related_name='Biochemical Pathway', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20633', related_name='Biochemical Pathway', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C17828', related_name='Biological Process', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C17828', related_name='Biological Process', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C12218', related_name='Chemotherapy Regimen or Agent Combination', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C12218', related_name='Chemotherapy Regimen or Agent Combination', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20181', related_name='Conceptual Entity', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20181', related_name='Conceptual Entity', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20047', related_name='Diagnostic or Prognostic Factor', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20047', related_name='Diagnostic or Prognostic Factor', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C7057', related_name='Disease, Disorder or Finding', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C7057', related_name='Disease, Disorder or Finding', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C1908', related_name='Drug, Food, Chemical or Biomedical Material', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C1908', related_name='Drug, Food, Chemical or Biomedical Material', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C22188', related_name='Experimental Organism Anatomical Concept', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C22188', related_name='Experimental Organism Anatomical Concept', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C22187', related_name='Experimental Organism Diagnosis', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C22187', related_name='Experimental Organism Diagnosis', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C26548', related_name='Gene Product', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C26548', related_name='Gene Product', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C16612', related_name='Gene', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C16612', related_name='Gene', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C97325', related_name='Manufactured Object', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C97325', related_name='Manufactured Object', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C14250', related_name='Organism', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C14250', related_name='Organism', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20189', related_name='Property or Attribute', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C20189', related_name='Property or Attribute', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C28428', related_name='Retired Concept', source=None, highlight=None, qualifiers=None), DisjointWith(uri=None, ct=None, type='disjointWith', related_code='C28428', related_name='Retired Concept', source=None, highlight=None, qualifiers=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get history for code + +Return history information for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_history` + +``` +2025-11-04T16:44:31.622 INFO : Get history for code - C3224 +2025-11-04T16:44:31.622 INFO : history = uri=None ct=None code='C3224' name='Melanoma' terminology='ncit' version='25.10d' level=None highlight=None subset_link=None mapset_link=None concept_status='DEFAULT' source=None leaf=False active=True synonyms=None definitions=None properties=None children=None parents=None descendants=None qualifiers=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None history=[History(uri=None, ct=None, code='C3224', name=None, action='create', var_date='2003-08-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2003-09-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2003-10-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2003-12-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2004-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2004-09-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2005-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2006-01-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2006-01-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2006-09-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2007-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2007-04-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2009-10-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2009-11-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2010-06-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2010-06-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-02-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-04-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-11-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-11-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-11-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-01-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-01-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-01-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-07-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-07-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-02-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-03-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-08-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-09-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-10-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-07-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-07-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-08-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-08-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-08-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-04-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-04-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-07-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-09-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-12-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-02-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-07-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-10-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-10-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-11-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-12-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-03-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-04-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-05-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-06-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-07-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-09-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-10-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-11-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-02-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-04-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-08-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-09-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2021-02-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2021-03-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2021-11-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2022-09-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2023-02-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2023-12-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2025-03-31', replacement_code=None, replacement_name=None)] maps=None paths=None +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get inverse associations for code + +Return inverse association entries for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_inverse_associations` + +``` +2025-11-04T16:45:36.666 INFO : Get inverse associations for code - C3224 +2025-11-04T16:45:36.666 INFO : inverse associations = [Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C178243', related_name='Family Cancer History Relative Primary Diagnosis Question', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C176985', related_name='Histology ICD-O Morphology Code', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C177621', related_name='ICD-O-3 Morphology Term Diagnosis Question', source=None, highlight=None, qualifiers=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get inverse roles for code + +Return inverse role entries for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_inverse_roles` + +``` +2025-11-04T16:46:38.828 INFO : Get inverse roles for code - C3224 +2025-11-04T16:46:38.828 INFO : inverse roles = [Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C21390', related_name='Beta/Gamma Crystallin Domain-Containing Protein 1', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C36101', related_name='BRCA2-Related Hereditary Breast and Ovarian Cancer Syndrome', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C10303', related_name='CDB Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C26083', related_name='Chondroitin Sulfate Proteoglycan 4', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C21389', related_name='CRYBG1 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54321', related_name='CRYBG1 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C21470', related_name='CSAG2 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54542', related_name='CSAG2 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81903', related_name='CSAG3 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81904', related_name='CSAG3 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C24316', related_name='CSPG4 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C52436', related_name='CSPG4 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63525', related_name='CVD Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63785', related_name='CVD-Aldesleukin-Interferon Alfa-2b Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C17680', related_name='Cyclin-Dependent Kinase 4', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C17786', related_name='Cyclin-Dependent Kinase Inhibitor 2A', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63782', related_name='Dacarbazine/Interferon Alfa Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63781', related_name='Dartmouth Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C82885', related_name='DCT Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C82886', related_name='DCT wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C21569', related_name='DNA Repair Protein XRCC3', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C8495', related_name='Hereditary Retinoblastoma', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C192671', related_name='Hereditary Tumor Syndrome Associated with Homologous Recombination Pathway Mutations', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C20765', related_name='KISS1 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54288', related_name='KISS1 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C2646', related_name='L-Dopachrome Tautomerase', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C26331', related_name='Latent-Transforming Growth Factor Beta-Binding Protein 2', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C24561', related_name='LTBP2 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C51270', related_name='LTBP2 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C21261', related_name='MCAM Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54308', related_name='MCAM wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Is_Biomarker_Of', related_code='C17513', related_name='Melanoma-Associated Antigen 3', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C21141', related_name='Metastasis-Suppressor KiSS-1', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81756', related_name='MIR221 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C82171', related_name='MIR221 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C80700', related_name='MIRLET7A1 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81825', related_name='MIRLET7A1 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C80701', related_name='MIRLET7A3 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81826', related_name='MIRLET7A3 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C80702', related_name='MIRLET7B Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81853', related_name='MIRLET7B wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C28629', related_name='MLANA Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54313', related_name='MLANA wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Associated_Disease', related_code='C40001', related_name='Ovarian Dermoid Cyst with Melanoma', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C18336', related_name='RAB8A Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C52547', related_name='RAB8A wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Associated_Disease', related_code='C36347', related_name='t(8;14)(q24;q11)', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C36347', related_name='t(8;14)(q24;q11)', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C36347', related_name='t(8;14)(q24;q11)', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Is_Biomarker_Of', related_code='C36347', related_name='t(8;14)(q24;q11)', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C36347', related_name='t(8;14)(q24;q11)', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C36347', related_name='t(8;14)(q24;q11)', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C84349', related_name='Tumor Suppressor ARF', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C3447', related_name='Werner Syndrome', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C20335', related_name='XRCC3 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C51014', related_name='XRCC3 wt Allele', source=None, highlight=None, qualifiers=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get maps for code + +Return map information for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_maps` + +``` +2025-11-04T16:47:37.762 INFO : Get maps for code - C3224 +2025-11-04T16:47:37.762 INFO : maps = [ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='8720/3', target_term_type='PT', target_code='morphology', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='8720/3', target_terminology='ICDO3', target_terminology_version='3.2', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='8720/3', target_terminology='ICDO3', target_terminology_version='3.1', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma, NOS', target_term_type='PT', target_code='primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma', target_term_type='LLT', target_code='10053571', target_terminology='MedDRA', target_terminology_version='18.1', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma', target_term_type='PT', target_code='relationship_primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get parents for code + +Return parent concepts for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_parents` + +``` +2025-11-04T16:48:11.193 INFO : Get parents for code - C3224 +2025-11-04T16:48:11.193 INFO : parents = [Concept(uri=None, ct=None, code='C9305', name='Malignant Neoplasm', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7058', name='Melanocytic Neoplasm', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get roles for code + +Return role entries for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_roles1` + +``` +2025-11-04T16:48:38.325 INFO : Get roles for code - C3224 +2025-11-04T16:48:38.325 INFO : roles = [Role(uri=None, ct=None, type='Disease_Excludes_Finding', related_code='C36122', related_name='Benign Cellular Infiltrate', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Finding', related_code='C43268', related_name='HMB-45-Positive Neoplastic Cells Present', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C12917', related_name='Malignant Cell', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Finding', related_code='C36115', related_name='Malignant Cellular Infiltrate', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Normal_Cell_Origin', related_code='C12591', related_name='Melanocyte', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C36873', related_name='Melanoma Cell', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C12922', related_name='Neoplastic Cell', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C36862', related_name='Neoplastic Melanocyte', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Finding', related_code='C40993', related_name='S-100-Positive Neoplastic Cells Present', source=None, highlight=None, qualifiers=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get subset members for subset code + +Return subset members for a specified subset code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_subset_members1` + +``` +2025-11-04T16:49:09.937 INFO : Get subset members for code - C3224 +2025-11-04T16:49:09.937 INFO : subset members = [Concept(uri=None, ct=None, code='C178243', name='Family Cancer History Relative Primary Diagnosis Question', terminology='ncit', version='25.10d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C176985', name='Histology ICD-O Morphology Code', terminology='ncit', version='25.10d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C177621', name='ICD-O-3 Morphology Term Diagnosis Question', terminology='ncit', version='25.10d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + +### Get subtree children for code + +Return the children entries in the subtree for a specified terminology and code. + +`pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_subtree_children` + +``` +2025-11-04T16:49:42.891 INFO : Get all subtree children for code - C3224 +2025-11-04T16:49:42.891 INFO : subtree children = [HierarchyNode(uri=None, ct=None, code='C3802', label='Amelanotic Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8410', label='Breast Melanoma', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C131506', label='Childhood Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3510', label='Cutaneous Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4236', label='Epithelioid Cell Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C217198', label='Localized Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C215044', label='Melanoma In Situ', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8925', label='Metastatic Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C66756', label='Mixed Epithelioid and Spindle Cell Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C205125', label='Nodular Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8711', label='Non-Cutaneous Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C118828', label='Orbital Melanoma', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C162547', label='Penile Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7087', label='Recurrent Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C147983', label='Refractory Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4228', label='Regressing Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C190239', label='Resectable Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4237', label='Spindle Cell Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C148517', label='Unresectable Melanoma', level=None, leaf=False, expanded=None, children=None)] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + ### Get concept descendants Return concept descendants information for a given terminology and code. The call client can be constrained by a @@ -201,6 +371,19 @@ Return all properties for a given terminology with default include setting (mini [Back to Top](#evsrestapi-client-sdk-python-tutorial) +### Get all concept statuses + +Return all concept status values for a specified terminology. + +`pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_concept_statuses` + +``` +2025-11-04T16:50:47.604 INFO : Get all statuses associated with terminology - ncit +2025-11-04T16:50:47.604 INFO : concept statuses - ['Header_Concept', 'Obsolete_Concept', 'Retired_Concept', 'Provisional_Concept', 'Concept_Pending_Approval'] +``` + +[Back to Top](#evsrestapi-client-sdk-python-tutorial) + ### Get property by code or label Return property for the specified code or label. diff --git a/python-examples/python_check.py b/python-examples/python_check.py new file mode 100644 index 00000000..e25bfc55 --- /dev/null +++ b/python-examples/python_check.py @@ -0,0 +1,124 @@ +import os +import re +import subprocess +import sys + +"""python_check.py + +Reads the `python-examples/README.md`, finds backticked pytest commands (lines that start with +`pytest tests...`), and runs each pytest invocation using the current Python interpreter +(`sys.executable -m pytest ...`). + +This mirrors the behavior of `java-examples/java_check.py` but for pytest commands, though without outputting to sample files. +""" + +healthy_scripts = [] +unhealthy_scripts = [] + + +def check_pytest_installation(): + try: + # Use the current python interpreter to check pytest availability + subprocess.run([sys.executable, "-m", "pytest", "--version"], capture_output=True, check=True) + except subprocess.CalledProcessError: + print("pytest is not installed or not available in the current Python environment.", file=sys.stderr) + sys.exit(1) + + +def execute_pytest(command): + """Execute a pytest command string and return stdout (or None on failure).""" + # If the captured command begins with 'pytest', run it via the current interpreter + run_cmd = command + if command.strip().startswith("pytest ") or command.strip() == "pytest": + # Prepend: -m pytest + # Use shell invocation to preserve any extra args the README might include. + run_cmd = f'"{sys.executable}" -m {command}' + + try: + result = subprocess.run(run_cmd, shell=True, capture_output=True, text=True) + if result.returncode == 0: + healthy_scripts.append(command) + return result.stdout + else: + unhealthy_scripts.append(command) + print(f"Error executing: {command}", file=sys.stderr) + print(result.stderr, file=sys.stderr) + return None + except Exception as e: + print(f"Exception running pytest command: {e}", file=sys.stderr) + return None + + +def process_markdown(): + """Parse README.md and extract pytest commands and their associated sample files.""" + if not os.path.exists("README.md"): + print(f"Error: README.md not found.") + sys.exit(1) + + with open("README.md", "r", encoding="utf-8") as f: + lines = f.readlines() + + sections = [] + current_section = {"pys": []} + in_section = False + + for line in lines: + if line.startswith("### ") and not in_section: + current_section = {"pys": [], "files": []} + in_section = True + continue + + if line.startswith("[Back to Top]") and in_section: + in_section = False + if current_section["pys"]: + sections.append(current_section) + continue + + if in_section: + # look for a backticked pytest invocation + if line.startswith("`pytest tests") or line.startswith("`pytest "): + py_command = line.strip() + # strip only the surrounding backticks + if py_command.startswith("`") and py_command.endswith("`"): + current_section["pys"].append(py_command[1:-1]) + else: + current_section["pys"].append(py_command) + + if current_section["pys"]: + sections.append(current_section) + + return sections + + +def run_sections(sections): + """Run pytest commands from each section and print outputs to stdout.""" + for section in sections: + for py_cmd in section["pys"]: + print(f"Running: {py_cmd}") + response = execute_pytest(py_cmd) + if response is None: + print("(no stdout captured — pytest returned non-zero or failed)\n") + + +def report_script_health(): + if unhealthy_scripts: + if healthy_scripts: + print("Healthy scripts (count {}): ".format(len(healthy_scripts))) + for script in healthy_scripts: + print(script) + print("Unhealthy scripts (count {}):".format(len(unhealthy_scripts))) + for script in unhealthy_scripts: + print(script) + else: + print("\nAll scripts executed successfully.") + + +if __name__ == "__main__": + if len(sys.argv) > 1: + print("This script ignores any command line arguments. Usage: python python_check.py") + # Verify pytest is available in this Python environment + check_pytest_installation() + sections = process_markdown() + run_sections(sections) + report_script_health() + diff --git a/python-examples/tests/test_search_endpoint_api.py b/python-examples/tests/test_search_endpoint_api.py index 8171f484..b4db9be2 100644 --- a/python-examples/tests/test_search_endpoint_api.py +++ b/python-examples/tests/test_search_endpoint_api.py @@ -46,7 +46,7 @@ def test_search(self, search_api): contains_expected_code: bool = False # ACT - response: ConceptResultList = search_api.search(None, self.terminology, None, None, None, ascending, include, + response: ConceptResultList = search_api.search(None, self.terminology, expected_code, None, None, ascending, include, from_record, page_size, None, None, None, None, None, None, None, None, None) @@ -138,7 +138,7 @@ def test_search_filter_by_definition_type(self, search_api): definition_type: str = "DEFINITION" from_record: int = 0 page_size: int = 5 - expected_total: int = 1462 + expected_total: int = 1568 # ACT response: ConceptResultList = search_api.search(None, self.terminology, term, type, None, ascending, include, @@ -307,7 +307,7 @@ def test_search_by_type_phrase(self, search_api): include: str = "minimal" from_record: int = 0 page_size: int = 5 - expected_total: int = 273 + expected_total: int = 284 # ACT response: ConceptResultList = search_api.search(None, self.terminology, term, type, None, ascending, include, @@ -359,7 +359,7 @@ def test_search_by_type_and(self, search_api): include: str = "minimal" from_record: int = 0 page_size: int = 5 - expected_total: int = 150 + expected_total: int = 151 # ACT response: ConceptResultList = search_api.search(None, self.terminology, term, type, None, ascending, include, @@ -464,7 +464,7 @@ def test_search_concepts_by_subset(self, search_api): from_record: int = 0 page_size: int = 5 subset: str = "C165258" - expected_total: int = 35 + expected_total: int = 36 # ACT response: ConceptResultList = search_api.search(None, self.terminology, term, None, None, ascending, include,