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FASTQ anaysis to inform alignment #51

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markmcdowall opened this issue Oct 30, 2018 · 0 comments
Open

FASTQ anaysis to inform alignment #51

markmcdowall opened this issue Oct 30, 2018 · 0 comments
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Future Issues for the future New Pipeline

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@markmcdowall
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With including FASTQC as a pipeline, it would be useful to have an automated way to identify the ideal input parameters for Bowtie2 and BWA (aln or mem) based on the results.
@markmcdowall markmcdowall added New Pipeline Future Issues for the future labels Oct 30, 2018
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