pydock.html

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        <div class="cbp-l-inline-title">pyDockDNA</div>
        <div class="cbp-l-inline-subtitle">by Brian Jiménez</div>
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					<p>pyDockDNA is a tool for the structural prediction of protein-DNA (and protein-protein) interactions.</p>
					
					<p>Given the 3D coordinates of two interacting molecular partners (protein and DNA), pyDockDNA returns the best rigid-body docking orientations generated by FTDock 
					( <a href="http://www.ncbi.nlm.nih.gov/pubmed/9299341" target="_blank">Gabb HA. et al. J Mol Biol 1997;272:106-120.</a>) 
					and evaluated by pyDockDNA scoring function, which includes electrostatics, desolvation energy and limited van der Waals contribution. </p>
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