paru -Syu $package_name does not install $package_name if it's an aur package

[RubenKelevra]

Affected Version

paru v2.0.3 - libalpm v14.0.0

Description

I wanted to install a package, and used paru -Syu $package_name. Paru fetched the pkgbuild and built it correctly in the chroot, but then did not mark it as necessary to install, and completed the installation step, skipping the package I wanted to install.

Since it's stored in my aur "repo" locally then, I could install the built package with paru -S $packagename from there, but that's not the intended workflow.

Output

❯ paru -Syu python-securetar 
[sudo] password for ruben: 
no new news
:: Synchronizing package databases...
 cachyos-v4 is up to date
 cachyos-core-v4 is up to date
 cachyos-extra-v4 is up to date
 cachyos is up to date
 core is up to date
 extra is up to date
 multilib is up to date
 aur is up to date
:: Looking for PKGBUILD upgrades...
:: Looking for AUR upgrades...
:: Looking for devel upgrades...
1 aur-aur/ladybird-git  r62425.062a266574-1 -> r62561.2c918b540d-1
:: Packages to exclude (eg: 1 2 3, 1-3):
:: 1
:: Resolving dependencies...
:: Calculating conflicts...
:: Calculating inner conflicts...
:: marked out of date: python-securetar  python-sqlalchemy2-stubs  python-sqlmodel

Aur (1)               Old Version  New Version    Make Only
aur/python-securetar               2023.3.0-2     No

:: Proceed to review? [Y/n]: 

:: Downloading PKGBUILDs...
/home/ruben/.cache/paru/clone/python-securetar/PKGBUILD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------]
# Maintainer: @RubenKelevra <[email protected]>

pkgname='python-securetar'
_module=${pkgname#python-}
pkgver='2024.2.1'
pkgrel=2
pkgdesc="Python module to handle tarfile backups."
url="https://github.com/pvizeli/securetar"
depends=(
        'python>=3.12'
        'python-cryptography'
)
makedepends=('python-setuptools')
license=('Apache')
arch=('any')
source=("https://files.pythonhosted.org/packages/source/${_module::1}/$_module/$_module-$pkgver.tar.gz")
b2sums=('ff4768bbd474fe71bd00dd86872ae2251f1beb461f00789baa547dda079efa31bc98d5495bb1ede131b1f20b52fdc30e67607dd1d1b25791200412a8f759a236')

build() {
        cd "${srcdir}/${_module}-${pkgver}"
        python setup.py build
}

package() {
        cd "${srcdir}/${_module}-${pkgver}"
        python setup.py install --root="${pkgdir}" --optimize=2 --skip-build
}


:: Accept changes? [Y/n]: 
fetching devel info...
:: Synchronizing package databases...
 cachyos-v4 is up to date
 cachyos-core-v4 is up to date
 cachyos-extra-v4 is up to date
 cachyos is up to date
 core is up to date
 extra is up to date
 multilib is up to date
 aur is up to date
:: Starting full system upgrade...
 there is nothing to do
==> Synchronizing chroot copy [/var/lib/paru/aur_chroot/root] -> [ruben]...done
:: Synchronizing package databases...
 cachyos-v4 is up to date
 cachyos-core-v4 is up to date
 cachyos-extra-v4 is up to date
 cachyos is up to date
 core is up to date
 extra is up to date
 multilib is up to date
 aur is up to date
:: Starting full system upgrade...
 there is nothing to do
==> Making package: python-securetar 2024.2.1-2 (Sat 20 Jul 2024 12:51:21 AM CEST)
==> Retrieving sources...
  -> Downloading securetar-2024.2.1.tar.gz...
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 11136  100 11136    0     0  44264      0 --:--:-- --:--:-- --:--:-- 44264
==> Validating source files with b2sums...
    securetar-2024.2.1.tar.gz ... Passed
==> Making package: python-securetar 2024.2.1-2 (Sat Jul 20 00:51:24 2024)
==> Checking runtime dependencies...
==> Installing missing dependencies...
resolving dependencies...
looking for conflicting packages...

Package (6)                           New Version  Net Change  Download Size

cachyos-core-v4/expat                 2.6.2-1.1      0.43 MiB               
cachyos-core-v4/mpdecimal             4.0.0-2.1      0.34 MiB               
extra/python-cffi                     1.16.0-2       1.32 MiB       0.27 MiB
extra/python-pycparser                2.22-2         1.71 MiB       0.22 MiB
cachyos-v4/python                     3.12.4-2      73.44 MiB               
cachyos-extra-v4/python-cryptography  42.0.6-1.1     4.43 MiB       0.97 MiB

Total Download Size:    1.46 MiB
Total Installed Size:  81.66 MiB

:: Proceed with installation? [Y/n] 
:: Retrieving packages...
 python-cryptography-42.0.6-1.1-x86_64                                                                            993.8 KiB  2.54 MiB/s 00:00 [---------------------------------------------------------------------------------------] 100%
 python-cffi-1.16.0-2-x86_64                                                                                      276.2 KiB   372 KiB/s 00:01 [---------------------------------------------------------------------------------------] 100%
 python-pycparser-2.22-2-any                                                                                      225.3 KiB   303 KiB/s 00:01 [---------------------------------------------------------------------------------------] 100%
 Total (3/3)                                                                                                     1495.3 KiB  1808 KiB/s 00:01 [---------------------------------------------------------------------------------------] 100%
(6/6) checking keys in keyring                                                                                                                [---------------------------------------------------------------------------------------] 100%
(6/6) checking package integrity                                                                                                              [---------------------------------------------------------------------------------------] 100%
(6/6) loading package files                                                                                                                   [---------------------------------------------------------------------------------------] 100%
(6/6) checking for file conflicts                                                                                                             [---------------------------------------------------------------------------------------] 100%
:: Processing package changes...
(1/6) installing expat                                                                                                                        [---------------------------------------------------------------------------------------] 100%
(2/6) installing mpdecimal                                                                                                                    [---------------------------------------------------------------------------------------] 100%
(3/6) installing python                                                                                                                       [---------------------------------------------------------------------------------------] 100%
Optional dependencies for python
    python-setuptools: for building Python packages using tooling that is usually bundled with Python
    python-pip: for installing Python packages using tooling that is usually bundled with Python
    python-pipx: for installing Python software not packaged on Arch Linux
    sqlite: for a default database integration [installed]
    xz: for lzma [installed]
    tk: for tkinter
(4/6) installing python-pycparser                                                                                                             [---------------------------------------------------------------------------------------] 100%
(5/6) installing python-cffi                                                                                                                  [---------------------------------------------------------------------------------------] 100%
Optional dependencies for python-cffi
    python-setuptools: "limited api" version checking in cffi.setuptools_ext
(6/6) installing python-cryptography                                                                                                          [---------------------------------------------------------------------------------------] 100%
==> Checking buildtime dependencies...
==> Installing missing dependencies...
resolving dependencies...
looking for conflicting packages...

Package (16)                     New Version  Net Change

extra/python-autocommand         2.2.2-6        0.08 MiB
extra/python-fastjsonschema      2.20.0-1       0.27 MiB
extra/python-inflect             7.3.1-1        0.36 MiB
extra/python-jaraco.context      4.3.0-4        0.03 MiB
extra/python-jaraco.functools    4.0.1-1        0.07 MiB
extra/python-jaraco.text         3.12.1-1       0.08 MiB
extra/python-more-itertools      10.3.0-1       0.63 MiB
extra/python-ordered-set         4.1.0-5        0.06 MiB
extra/python-packaging           24.1-1         0.49 MiB
extra/python-platformdirs        4.2.2-1        0.24 MiB
extra/python-tomli               2.0.1-4        0.10 MiB
extra/python-trove-classifiers   2024.7.1-1     0.12 MiB
extra/python-typeguard           4.3.0-1        0.41 MiB
extra/python-typing_extensions   4.12.2-1       0.41 MiB
extra/python-validate-pyproject  0.18-1         0.33 MiB
extra/python-setuptools          1:69.5.1-1     8.82 MiB

Total Installed Size:  12.51 MiB

:: Proceed with installation? [Y/n] 
(16/16) checking keys in keyring                                                                                                              [---------------------------------------------------------------------------------------] 100%
(16/16) checking package integrity                                                                                                            [---------------------------------------------------------------------------------------] 100%
(16/16) loading package files                                                                                                                 [---------------------------------------------------------------------------------------] 100%
(16/16) checking for file conflicts                                                                                                           [---------------------------------------------------------------------------------------] 100%
:: Processing package changes...
( 1/16) installing python-more-itertools                                                                                                      [---------------------------------------------------------------------------------------] 100%
( 2/16) installing python-jaraco.functools                                                                                                    [---------------------------------------------------------------------------------------] 100%
( 3/16) installing python-jaraco.context                                                                                                      [---------------------------------------------------------------------------------------] 100%
( 4/16) installing python-autocommand                                                                                                         [---------------------------------------------------------------------------------------] 100%
( 5/16) installing python-typing_extensions                                                                                                   [---------------------------------------------------------------------------------------] 100%
( 6/16) installing python-typeguard                                                                                                           [---------------------------------------------------------------------------------------] 100%
( 7/16) installing python-inflect                                                                                                             [---------------------------------------------------------------------------------------] 100%
( 8/16) installing python-jaraco.text                                                                                                         [---------------------------------------------------------------------------------------] 100%
( 9/16) installing python-ordered-set                                                                                                         [---------------------------------------------------------------------------------------] 100%
(10/16) installing python-packaging                                                                                                           [---------------------------------------------------------------------------------------] 100%
(11/16) installing python-platformdirs                                                                                                        [---------------------------------------------------------------------------------------] 100%
(12/16) installing python-tomli                                                                                                               [---------------------------------------------------------------------------------------] 100%
(13/16) installing python-fastjsonschema                                                                                                      [---------------------------------------------------------------------------------------] 100%
(14/16) installing python-trove-classifiers                                                                                                   [---------------------------------------------------------------------------------------] 100%
(15/16) installing python-validate-pyproject                                                                                                  [---------------------------------------------------------------------------------------] 100%
(16/16) installing python-setuptools                                                                                                          [---------------------------------------------------------------------------------------] 100%
==> Retrieving sources...
  -> Found securetar-2024.2.1.tar.gz
==> WARNING: Skipping all source file integrity checks.
==> Extracting sources...
  -> Extracting securetar-2024.2.1.tar.gz with bsdtar
==> Sources are ready.
python-securetar-2023.3.0-2: parsing pkg list...
==> Making package: python-securetar 2024.2.1-2 (Sat 20 Jul 2024 12:51:28 AM CEST)
==> Retrieving sources...
  -> Found securetar-2024.2.1.tar.gz
==> Validating source files with b2sums...
    securetar-2024.2.1.tar.gz ... Passed
==> Making package: python-securetar 2024.2.1-2 (Sat Jul 20 00:51:30 2024)
==> Checking runtime dependencies...
==> Checking buildtime dependencies...
==> WARNING: Using existing $srcdir/ tree
==> Starting build()...
running build
running build_py
creating build
creating build/lib
creating build/lib/securetar
copying securetar/__init__.py -> build/lib/securetar
==> Entering fakeroot environment...
==> Starting package()...
running install
/usr/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running install_lib
creating /build/python-securetar/pkg/python-securetar/usr
creating /build/python-securetar/pkg/python-securetar/usr/lib
creating /build/python-securetar/pkg/python-securetar/usr/lib/python3.12
creating /build/python-securetar/pkg/python-securetar/usr/lib/python3.12/site-packages
creating /build/python-securetar/pkg/python-securetar/usr/lib/python3.12/site-packages/securetar
copying build/lib/securetar/__init__.py -> /build/python-securetar/pkg/python-securetar/usr/lib/python3.12/site-packages/securetar
byte-compiling /build/python-securetar/pkg/python-securetar/usr/lib/python3.12/site-packages/securetar/__init__.py to __init__.cpython-312.pyc
writing byte-compilation script '/tmp/tmpyn291xh_.py'
/usr/bin/python /tmp/tmpyn291xh_.py
removing /tmp/tmpyn291xh_.py
running install_egg_info
running egg_info
writing securetar.egg-info/PKG-INFO
writing dependency_links to securetar.egg-info/dependency_links.txt
writing requirements to securetar.egg-info/requires.txt
writing top-level names to securetar.egg-info/top_level.txt
reading manifest file 'securetar.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files matching '*.py[co]' found under directory '*'
adding license file 'LICENSE'
writing manifest file 'securetar.egg-info/SOURCES.txt'
Copying securetar.egg-info to /build/python-securetar/pkg/python-securetar/usr/lib/python3.12/site-packages/securetar-2024.2.1-py3.12.egg-info
running install_scripts
==> Tidying install...
  -> Removing libtool files...
  -> Purging unwanted files...
  -> Removing static library files...
  -> Stripping unneeded symbols from binaries and libraries...
  -> Compressing man and info pages...
==> Checking for packaging issues...
==> Creating package "python-securetar"...
  -> Generating .PKGINFO file...
  -> Generating .BUILDINFO file...
  -> Generating .MTREE file...
  -> Compressing package...
==> Leaving fakeroot environment.
==> Finished making: python-securetar 2024.2.1-2 (Sat Jul 20 00:51:32 2024)
[INFO] Extracting aur.db.tar.gz to a temporary location...
[INFO] Extracting aur.files.tar.gz to a temporary location...
[INFO] Adding package '/var/lib/repo/aur/python-securetar-2024.2.1-2-any.pkg.tar.zst'
[INFO] Computing checksums...
[INFO] Creating 'desc' db entry...
[INFO] Creating 'files' db entry...
[INFO] Creating updated database file '/var/lib/repo/aur/aur.db.tar.gz'
:: syncing local databases...
  syncing aur.db...
:: Synchronizing package databases...
 cachyos-v4 is up to date
 cachyos-core-v4 is up to date
 cachyos-extra-v4 is up to date
 cachyos is up to date
 core is up to date
 extra is up to date
 multilib is up to date
 aur is up to date
:: Starting full system upgrade...
 there is nothing to do

~/Projects/AUR_maintained_packages/python-securetar master 41s
❯ paru -Qs python-securetar

~/Projects/AUR_maintained_packages/python-securetar master
❯ paru -S python-securetar
resolving dependencies...
looking for conflicting packages...

Package (1)           New Version  Net Change

aur/python-securetar  2024.2.1-2     0.04 MiB

Total Installed Size:  0.04 MiB

:: Proceed with installation? [Y/n] 
:: Retrieving packages...
 python-securetar-2024.2.1-2-any                                                                                   12.7 KiB  12.4 MiB/s 00:00 [---------------------------------------------------------------------------------------] 100%
(1/1) checking keys in keyring                                                                                                                [---------------------------------------------------------------------------------------] 100%
(1/1) checking package integrity                                                                                                              [---------------------------------------------------------------------------------------] 100%
(1/1) loading package files                                                                                                                   [---------------------------------------------------------------------------------------] 100%
(1/1) checking for file conflicts                                                                                                             [---------------------------------------------------------------------------------------] 100%
:: Processing package changes...
(1/1) installing python-securetar                                                                                                             [---------------------------------------------------------------------------------------] 100%
:: Running post-transaction hooks...
(1/1) Arming ConditionNeedsUpdate...

Config files

paru.conf

[options]
PgpFetch
Devel
Provides
DevelSuffixes = -git -cvs -svn -bzr -darcs -always -hg -fossil
BottomUp
RemoveMake
SudoLoop
UseAsk
SaveChanges
CombinedUpgrade
CleanAfter
UpgradeMenu
NewsOnUpgrade
LocalRepo
Chroot = /var/lib/paru/aur_chroot

pacman.conf

[options]
CacheDir     = /var/cache/pacman/pkg/
CacheDir     = /var/lib/repo/aur
HoldPkg     = pacman glibc
Architecture = auto
Color
ILoveCandy
VerbosePkgLists
ParallelDownloads = 10
SigLevel    = Required DatabaseOptional
LocalFileSigLevel = Optional
[cachyos-v4]
Include = /etc/pacman.d/cachyos-v4-mirrorlist
[cachyos-core-v4]
Include = /etc/pacman.d/cachyos-v4-mirrorlist
[cachyos-extra-v4]
Include = /etc/pacman.d/cachyos-v4-mirrorlist
[cachyos]
Include = /etc/pacman.d/cachyos-mirrorlist
[core]
Include = /etc/pacman.d/mirrorlist
[extra]
Include = /etc/pacman.d/mirrorlist
[multilib]
Include = /etc/pacman.d/mirrorlist
[aur]
SigLevel = PackageOptional DatabaseOptional
Server = file:///var/lib/repo/aur