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I tried to use the command cmd.align(structure1,structure2) to align 2 different structures, and it gave me the following error code:
/usr/local/lib/python3.8/site-packages/pymol/fitting.py in align(mobile, target, cutoff, cycles, gap, extend, max_gap, object, matrix, mobile_state, target_state, quiet, max_skip, transform, reset, _self)
395 finally:
396 _self.unlock(r,_self)
--> 397 if _self._raising(r,_self): raise pymol.CmdException
398 return r
399
CmdException: Error:
My goal is to align multiple protein structures successively (align struc1 to struc2, then align struc2 to struct3); the command "alingto" works though, but it's not essentially what I want to do. How can I fix the code here?
Thank you in advance for your help!
The text was updated successfully, but these errors were encountered:
Hi All,
I tried to use the command cmd.align(structure1,structure2) to align 2 different structures, and it gave me the following error code:
/usr/local/lib/python3.8/site-packages/pymol/fitting.py in align(mobile, target, cutoff, cycles, gap, extend, max_gap, object, matrix, mobile_state, target_state, quiet, max_skip, transform, reset, _self)
395 finally:
396 _self.unlock(r,_self)
--> 397 if _self._raising(r,_self): raise pymol.CmdException
398 return r
399
CmdException: Error:
My goal is to align multiple protein structures successively (align struc1 to struc2, then align struc2 to struct3); the command "alingto" works though, but it's not essentially what I want to do. How can I fix the code here?
Thank you in advance for your help!
The text was updated successfully, but these errors were encountered: