The Proteomics.data.analysis package was prepared by the MRC
Toxicology unit
Bioinformatics
and Mass4Tox
Proteomics
facilities to provide training in the basics of proteomics analyses.
It assume the user’s data has been processed by Proteome Discoverer, as per standard Proteomics facility workflows
Tutorials take the form of Rmarkdown notebooks and can be viewed by navigating to https://mrctoxbioinformatics.github.io/Proteomics_data_analysis/
To ensure all the neccessary R packages are installed to run the code in the tutorials, you can install this package
remotes::install_github("MRCToxBioinformatics/Proteomics_data_analysis", build_vignettes = TRUE, dependencies = TRUE)