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setup.py
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setup.py
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#!/usr/bin/env python
"""
========
setup.py
========
installs beditor
USAGE :
python setup.py install
Or for local installation:
python setup.py install --prefix=/your/local/dir
"""
import sys
try:
from setuptools import setup, find_packages, Extension
except ImportError:
from distutils.core import setup, find_packages, Extension
if (sys.version_info[0], sys.version_info[1]) != (3, 6):
raise RuntimeError('Python 3.6 required ')
# main setup
setup(
name='beditor',
author='Rohan Dandage',
author_email='[email protected], [email protected]',
version='1.1.9',
url='https://github.com/rraadd88/beditor',
download_url='https://github.com/rraadd88/beditor/archive/master.zip',
description='A computational workflow for designing libraries of guide RNAs for CRISPR base editing',
long_description='https://github.com/rraadd88/beditor/blob/master/README.md',
keywords=['CRISPR','genome','biology'],
license='General Public License v. 3',
install_requires=['biopython==1.71',
'regex==2018.7.11',
'pandas == 0.23.3',
# 'pyyaml',
'numpy==1.13.1',
'matplotlib==2.2.2',
'pysam==0.14.1',
'requests==2.19.1',
'scipy==1.1.0',
'tqdm==4.23.4',
'seaborn==0.8.1',
# 'pyensembl==1.4.0',
'datacache==1.1.4',
'dna_features_viewer==0.1.9',
],
platforms='Tested on Ubuntu 16.04 64bit',
packages=find_packages(),
package_data={'': ['beditor/data']},
include_package_data=True,
entry_points={
'console_scripts': ['beditor = beditor.pipeline:main',],
},
)