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Segment groups grab bag: loading and GUI #587

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11 tasks
PaulHax opened this issue Apr 29, 2024 · 0 comments
Open
11 tasks

Segment groups grab bag: loading and GUI #587

PaulHax opened this issue Apr 29, 2024 · 0 comments
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segmentation

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@PaulHax
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PaulHax commented Apr 29, 2024 •
edited
Loading

Load segmenations/labels/classes from DICOM SEG files

  • Surface "SegmentSequence" (0062,0002) tag, which is not exposed by readDicomTags.
  • Map Recommended Display CIELab Value (0062,000D) tag to a segment color
  • If "Segmentation Type" DICOM tag is FRACTIONAL, then load as a layer, not segment group.

Names and Colors

Loading GUI

  • Add spinner to show when loading/converting segmentations.
  • Add Data Browser button to "Convert DICOM to segment group"
  • Auto load SEG on base image when clicking on base image in Data browser (and base image as not loaded at the same time as the SEG, which this PR covers.) Same for CT and PET.
  • A user notification error message for when converting image to segmentation group and error happens "Error: Image does not match parent image space"

Rendering

Related issues:
#512
#473
SEG file with multiple segments loading wrong: #639

Related PR:
#576
@PaulHax PaulHax changed the title Segment group loading and GUI grab bag Segment groups grab bag: loading and GUI May 13, 2024
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