clean up

Author: calderjo

Dockerfile.tmpl

@@ -33,9 +33,9 @@ RUN uv pip install --system "tbb>=2022" "libpysal==4.9.2"
 # b/415358158: Gensim removed from Colab image to upgrade scipy
 # b/456239669: remove huggingface-hub pin when pytorch-lighting and transformer are compatible
 # b/315753846: Unpin translate package, currently conflicts with adk 1.17.0
-# b/(xxxxx): Unpin Pandas once cuml/cudf are compatible, version 3.0 causes issues
-# b/(xxxxx): Unpin protobuf, v > 5.29.5 causes issues with numerous packages
-# b/(xxxxx): numpy will auto-upgrade to 2.4.x, which causes issues with numerous packages
+# b/468379293: Unpin Pandas once cuml/cudf are compatible, version 3.0 causes issues
+# b/468383498: numpy will auto-upgrade to 2.4.x, which causes issues with numerous packages
+# b/468367647: Unpin protobuf, version greater than v5.29.5 causes issues with numerous packages
 RUN uv pip install --system --force-reinstall --no-deps torchtune gensim "scipy<=1.15.3" "huggingface-hub==0.36.0" "google-cloud-translate==3.12.1" "numpy==2.0.2" "pandas==2.2.2"
 RUN uv pip install --system --force-reinstall "protobuf==5.29.5"
 

kaggle_requirements.txt

@@ -81,9 +81,7 @@ nbconvert==6.4.5
 nbdev
 nilearn
 olefile
-# b/445960030: Broken in 1.19.0. See https://github.com/onnx/onnx/issues/7249.
-# Fixed with https://github.com/onnx/onnx/pull/7254. Upgrade when version with fix is published.
-onnx==1.18.0
+onnx
 openslide-bin
 openslide-python
 optuna
@@ -122,8 +120,6 @@ scikit-surprise
 seaborn
 git+https://github.com/facebookresearch/segment-anything.git
 shap
-# b/(xxxxx): unpin, currently needed as dependency for tsfresh
-statsmodels==0.14.6
 squarify
 tensorflow-cloud
 tensorflow-io