From fcb3e207d5eaa2b8fce32bf65b6d07724da049a5 Mon Sep 17 00:00:00 2001
From: Prashant Gaurav <pgaurav3@gatech.edu>
Date: Mon, 27 Jun 2011 16:25:33 -0400
Subject: [PATCH 1/3] added prefix and workdir option, fixed -d option

---
 gtfold-mfe/include/algorithms-partition.h |  2 +-
 gtfold-mfe/include/options.h              |  3 ++
 gtfold-mfe/src/algorithms-partition.c     | 11 ++--
 gtfold-mfe/src/main.cc                    | 21 +++-----
 gtfold-mfe/src/options.cc                 | 61 +++++++++++++++++------
 5 files changed, 64 insertions(+), 34 deletions(-)

diff --git a/gtfold-mfe/include/algorithms-partition.h b/gtfold-mfe/include/algorithms-partition.h
index ef55266..3bfb26d 100644
--- a/gtfold-mfe/include/algorithms-partition.h
+++ b/gtfold-mfe/include/algorithms-partition.h
@@ -15,7 +15,7 @@ typedef struct _pFuncData {
 */
 void fill_partition_fn_arrays(int len, double** QB, double** Q, double** QM);
 void fillBasePairProbabilities(int length, double **Q, double **QB, double **QM, double**P);
-void printBasePairProbabilities(int n, int *structure, double **P);
+void printBasePairProbabilities(int n, int *structure, double **P, const char* bppfile);
 
 double probabilityUnpaired(int length, int i, double **P);
 
diff --git a/gtfold-mfe/include/options.h b/gtfold-mfe/include/options.h
index 58db1a8..4d4dbf1 100644
--- a/gtfold-mfe/include/options.h
+++ b/gtfold-mfe/include/options.h
@@ -25,7 +25,10 @@ extern bool UNAMODE;
 extern string seqfile;
 extern string constraintsFile;
 extern string shapeFile;
+extern string outputDir;
 extern string outputFile;
+extern string bppOutFile;
+extern string suboptFile;
 extern string paramDir;
 
 extern float suboptDelta;
diff --git a/gtfold-mfe/src/algorithms-partition.c b/gtfold-mfe/src/algorithms-partition.c
index a914ddd..fa3b9b8 100644
--- a/gtfold-mfe/src/algorithms-partition.c
+++ b/gtfold-mfe/src/algorithms-partition.c
@@ -199,16 +199,21 @@ void fillBasePairProbabilities(int length, double **Q, double **QB, double **QM,
  *                  unpaired.
  * @param P Partition function array
  */
-void printBasePairProbabilities(int n, int *structure, double **P) {
+void printBasePairProbabilities(int n, int *structure, double **P, const char* outfile) {
+    FILE* outp = fopen(outfile,"w");
+	if (outp == NULL) {
+		fprintf(stderr, "printBasePairProbabilities() : Cannot open %s",outfile);	
+	}	
 
     int i;
     for(i=1; i<=n; ++i) {
         int j = structure[i];
         if(j)
-            printf("%d-%d pair\tPr: %f\n", i, j, P[MIN(i,j)][MAX(i,j)]);
+            fprintf(outp, "%d-%d pair\tPr: %f\n", i, j, P[MIN(i,j)][MAX(i,j)]);
         else
-            printf("%d unpaired\tPr: %f\n", i, probabilityUnpaired(n, i, P));
+            fprintf(outp, "%d unpaired\tPr: %f\n", i, probabilityUnpaired(n, i, P));
     }
+	fclose(outp);
 }
 
 /**
diff --git a/gtfold-mfe/src/main.cc b/gtfold-mfe/src/main.cc
index 893e468..52172cd 100644
--- a/gtfold-mfe/src/main.cc
+++ b/gtfold-mfe/src/main.cc
@@ -250,20 +250,11 @@ int main(int argc, char** argv) {
 		t1 = get_seconds();
 		ss_map_t subopt_data = subopt_traceback(seq.length(), 100.0*suboptDelta);
 		t1 = get_seconds() - t1;
-		printf("Subopt traceback running time: %9.6f seconds\n\n", t1);
+		printf("\n");
+		printf("Subopt traceback running time: %9.6f seconds\n", t1);
 		
-		string suboptfile;
-		suboptfile	+= seqfile;
-		if(suboptfile.find("/") != string::npos) {
-			size_t pos = suboptfile.find_last_of("/");
-			suboptfile.erase(0,pos+1);
-		}
-		if(suboptfile.find(".") != string::npos)
-			suboptfile.erase(suboptfile.rfind("."));
-		suboptfile += ".ss";	
-		
-		printf("Suboptimal structures saved in %s\n", suboptfile.c_str());
-		save_subopt_file(suboptfile, subopt_data, seq, energy);	
+		printf("Subopt structures saved in %s\n", suboptFile.c_str());
+		save_subopt_file(suboptFile, subopt_data, seq, energy);	
 		free_fold(seq.length());
 		exit(0);
 	}
@@ -301,6 +292,7 @@ int main(int argc, char** argv) {
 	}
 
 	if(BPP_ENABLED){
+		printf("\n");
 		printf("Calculating partition function\n");
 		double ** Q,  **QM, **QB, **P;
 		Q = mallocTwoD(seq.length() + 1, seq.length() + 1);
@@ -311,7 +303,8 @@ int main(int argc, char** argv) {
 	
 		fill_partition_fn_arrays(seq.length(), Q, QB, QM);
 		fillBasePairProbabilities(seq.length(), Q, QB, QM, P);
-		printBasePairProbabilities(seq.length(), structure, P);
+		printBasePairProbabilities(seq.length(), structure, P, bppOutFile.c_str());
+		printf("Saved BPP output in %s\n",bppOutFile.c_str());
 
 		freeTwoD(Q, seq.length() + 1, seq.length() + 1);
 		freeTwoD(QM, seq.length() + 1, seq.length() + 1);
diff --git a/gtfold-mfe/src/options.cc b/gtfold-mfe/src/options.cc
index 212fe3b..6dad154 100644
--- a/gtfold-mfe/src/options.cc
+++ b/gtfold-mfe/src/options.cc
@@ -20,7 +20,11 @@ bool b_prefilter = false;
 
 string seqfile = "";
 string constraintsFile = "";
+string outputPrefix = "";
 string outputFile = "";
+string suboptFile = "";
+string bppOutFile = "";
+string outputDir = "";
 string shapeFile = "";
 string paramDir; // default value
 
@@ -48,10 +52,11 @@ void help() {
     printf("   -p  --paramdir DIR   Path to directory from where parameters are to be read\n");
     printf("   -m   		Enable terminal mismatch calculations\n");
    	printf("   -n, --noisolate      Prevent isolated base pairs from forming\n");
-    printf("   -o, --output FILE    Output to FILE (default output is to a .ct extension)\n");
+    printf("   -o, --output NAME    Name output files with prefix\n");
+    printf("   -w, --workDir DIR    Path to directory for output files\n");
     printf("   -t, --threads num    Limit number of threads used\n");
     printf("   --unamode 		Enable UNAfold mode. \n");
-    printf("   --prefilter 		value1,value2 Sets the prefilter mode similar to UNAfold\n");
+    printf("   --prefilter value1,value2 \n\t\t\tSets the prefilter mode similar to UNAfold\n");
 
     printf("\n");
     printf("   -h, --help           Output help (this message) and exit\n");
@@ -89,20 +94,30 @@ void parse_options(int argc, char** argv) {
 					help();
 			} else if(strcmp(argv[i], "--limitCD") == 0 || strcmp(argv[i], "-d") == 0) {
 				if(i < argc){
-					LIMIT_DISTANCE = true;
 					contactDistance = atoi(argv[++i]);
+					stringstream ss;
+					ss << contactDistance;
+					if (contactDistance >= 0 && !strcmp(ss.str().c_str(),argv[i]))
+						LIMIT_DISTANCE = true;
+					else
+						help();
 				}
 				else
 					help();
 			} else if(strcmp(argv[i], "--noisolate") == 0 || strcmp(argv[i], "-n") == 0) {
 				NOISOLATE = true;
-			} else if(strcmp(argv[i], "--output") == 0 || strcmp(argv[i], "-o") == 0) {
+			} else if(strcmp(argv[i], "--prefix") == 0 || strcmp(argv[i], "-o") == 0) {
+				if(i < argc)
+					outputPrefix = argv[++i];
+				else
+					help();
+			} else if (strcmp(argv[i], "--workdir") == 0 || strcmp(argv[i], "-w") == 0) {
 				if(i < argc)
-					outputFile = argv[++i];
+					outputDir = argv[++i];
 				else
 					help();
 			} else if (strcmp(argv[i], "--paramdir") == 0 || strcmp(argv[i], "-p") == 0) {
-				if(i < argc) {
+					if(i < argc) {
 					paramDir = argv[++i];
 					PARAM_DIR = true;
 				}
@@ -122,7 +137,7 @@ void parse_options(int argc, char** argv) {
 						printf("INVALID ARGUMENTS: --prefilter accepts positive integers\n\n");
 						help();
 					}
-					b_prefilter =true;
+					b_prefilter = true;
 					prefilter1 = value1;
 					prefilter2 = value2;
 				} else 
@@ -165,24 +180,36 @@ void parse_options(int argc, char** argv) {
 	}
 
 	// If no output file specified, create one
-	if(outputFile.empty()) {
-
+	if(outputPrefix.empty()) {
 		// base it off the input file
-		outputFile += seqfile;
+		outputPrefix += seqfile;
 		
 		size_t pos;
 		// extract file name from the path
-		if ((pos=outputFile.find_last_of('/')) > 0) {
-			outputFile = outputFile.substr(pos+1);
+		if ((pos=outputPrefix.find_last_of('/')) > 0) {
+			outputPrefix = outputPrefix.substr(pos+1);
 		}
 
 		// and if an extension exists, remove it ...
-		if(outputFile.find(".") != string::npos)
-			outputFile.erase(outputFile.rfind("."));
+		if(outputPrefix.find(".") != string::npos)
+			outputPrefix.erase(outputPrefix.rfind("."));
+	 }
 
-		// ... and append the .ct
-		outputFile += ".ct";
+	// If output dir specified
+	if (!outputDir.empty()) {
+		outputFile += outputDir;
+		suboptFile += outputDir;
+		bppOutFile += outputDir;
 	}
+	// ... and append the .ct
+	outputFile += outputPrefix;
+	outputFile += ".ct";
+
+	suboptFile += outputPrefix;	
+	suboptFile += "_ss.txt";	
+
+	bppOutFile += outputPrefix;	
+	bppOutFile += "_bpp.txt";	
 }
 
 /**
@@ -227,11 +254,13 @@ void printRunConfiguration(string seq) {
 
 	if (BPP_ENABLED == true) {
 		printf("+ calculating base pair probabilities\n");
+		printf("+ BPP output file: %s\n", bppOutFile.c_str());
 		standardRun = false;
 	}
 
 	if (SUBOPT_ENABLED) {
 		printf("+ calculating suboptimal structures within %f kcal/mol of MFE\n", suboptDelta);
+		printf("+ suboptimal structures file: %s\n", suboptFile.c_str());
 		standardRun = false;
 	}
 

From 43b8ec5913c7ca17c829a2ac42c91d324ea9a784 Mon Sep 17 00:00:00 2001
From: Prashant Gaurav <pgaurav3@gatech.edu>
Date: Mon, 27 Jun 2011 17:26:32 -0400
Subject: [PATCH 2/3] added Vienna energy params

---
 gtfold-mfe/configure                   |   3 +-
 gtfold-mfe/configure.in                |   2 +-
 gtfold-mfe/data/Makefile.am            |   2 +-
 gtfold-mfe/data/Makefile.in            |   2 +-
 gtfold-mfe/data/RNAParams/Makefile.am  |  23 +
 gtfold-mfe/data/RNAParams/Makefile.in  | 399 +++++++++++++++++
 gtfold-mfe/data/RNAParams/dangle.DAT   |   8 +
 gtfold-mfe/data/RNAParams/int11.DAT    |  24 ++
 gtfold-mfe/data/RNAParams/int21.DAT    |  96 +++++
 gtfold-mfe/data/RNAParams/int22.DAT    | 576 +++++++++++++++++++++++++
 gtfold-mfe/data/RNAParams/loop.DAT     |  30 ++
 gtfold-mfe/data/RNAParams/miscloop.DAT |  12 +
 gtfold-mfe/data/RNAParams/sint2.DAT    |  24 ++
 gtfold-mfe/data/RNAParams/sint4.DAT    | 576 +++++++++++++++++++++++++
 gtfold-mfe/data/RNAParams/stack.DAT    |  16 +
 gtfold-mfe/data/RNAParams/tloop.DAT    |  30 ++
 gtfold-mfe/data/RNAParams/tstacke.DAT  |  16 +
 gtfold-mfe/data/RNAParams/tstackh.DAT  |  16 +
 gtfold-mfe/data/RNAParams/tstacki.DAT  |  16 +
 gtfold-mfe/data/RNAParams/tstackm.DAT  |  16 +
 20 files changed, 1883 insertions(+), 4 deletions(-)
 create mode 100644 gtfold-mfe/data/RNAParams/Makefile.am
 create mode 100644 gtfold-mfe/data/RNAParams/Makefile.in
 create mode 100644 gtfold-mfe/data/RNAParams/dangle.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/int11.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/int21.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/int22.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/loop.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/miscloop.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/sint2.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/sint4.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/stack.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/tloop.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/tstacke.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/tstackh.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/tstacki.DAT
 create mode 100644 gtfold-mfe/data/RNAParams/tstackm.DAT

diff --git a/gtfold-mfe/configure b/gtfold-mfe/configure
index 37e6205..c0dc675 100755
--- a/gtfold-mfe/configure
+++ b/gtfold-mfe/configure
@@ -6047,7 +6047,7 @@ fi
 
 ac_config_files="$ac_config_files Makefile src/Makefile data/Makefile include/Makefile"
 
-ac_config_files="$ac_config_files data/Turner99/Makefile data/Turner04/Makefile data/Andronescu/Makefile data/UNAParams/Makefile"
+ac_config_files="$ac_config_files data/Turner99/Makefile data/Turner04/Makefile data/Andronescu/Makefile data/UNAParams/Makefile data/RNAParams/Makefile"
 
 
 cat >confcache <<\_ACEOF
@@ -6701,6 +6701,7 @@ do
     "data/Turner04/Makefile") CONFIG_FILES="$CONFIG_FILES data/Turner04/Makefile" ;;
     "data/Andronescu/Makefile") CONFIG_FILES="$CONFIG_FILES data/Andronescu/Makefile" ;;
     "data/UNAParams/Makefile") CONFIG_FILES="$CONFIG_FILES data/UNAParams/Makefile" ;;
+    "data/RNAParams/Makefile") CONFIG_FILES="$CONFIG_FILES data/RNAParams/Makefile" ;;
 
   *) { { $as_echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
 $as_echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
diff --git a/gtfold-mfe/configure.in b/gtfold-mfe/configure.in
index e4e1755..03441fc 100644
--- a/gtfold-mfe/configure.in
+++ b/gtfold-mfe/configure.in
@@ -178,7 +178,7 @@ AM_CONDITIONAL(GTFOLD_DEBUG, test x$debug = xtrue)
 
 dnl Create makefiles and other configuration files
 AC_CONFIG_FILES([Makefile src/Makefile data/Makefile include/Makefile])
-AC_CONFIG_FILES([data/Turner99/Makefile data/Turner04/Makefile data/Andronescu/Makefile data/UNAParams/Makefile])
+AC_CONFIG_FILES([data/Turner99/Makefile data/Turner04/Makefile data/Andronescu/Makefile data/UNAParams/Makefile data/RNAParams/Makefile])
 
 dnl Generate `config.status' and launch it
 AC_OUTPUT
diff --git a/gtfold-mfe/data/Makefile.am b/gtfold-mfe/data/Makefile.am
index b6af86e..001e73e 100644
--- a/gtfold-mfe/data/Makefile.am
+++ b/gtfold-mfe/data/Makefile.am
@@ -1,2 +1,2 @@
-SUBDIRS = UNAParams Turner04 Turner99 Andronescu 
+SUBDIRS = UNAParams RNAParams Turner04 Turner99 Andronescu 
 
diff --git a/gtfold-mfe/data/Makefile.in b/gtfold-mfe/data/Makefile.in
index f591147..a245c3c 100644
--- a/gtfold-mfe/data/Makefile.in
+++ b/gtfold-mfe/data/Makefile.in
@@ -189,7 +189,7 @@ target_vendor = @target_vendor@
 top_build_prefix = @top_build_prefix@
 top_builddir = @top_builddir@
 top_srcdir = @top_srcdir@
-SUBDIRS = UNAParams Turner04 Turner99 Andronescu 
+SUBDIRS = UNAParams RNAParams Turner04 Turner99 Andronescu 
 all: all-recursive
 
 .SUFFIXES:
diff --git a/gtfold-mfe/data/RNAParams/Makefile.am b/gtfold-mfe/data/RNAParams/Makefile.am
new file mode 100644
index 0000000..8655bda
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/Makefile.am
@@ -0,0 +1,23 @@
+## Process this file with automake to produce Makefile.in
+
+gtfold_datadir = $(datadir)/@PACKAGE@/RNAParams
+
+gtfold_data_DATA = \
+	stack.DAT\
+	miscloop.DAT\
+	dangle.DAT\
+	loop.DAT\
+	int11.DAT\
+	int21.DAT\
+	int22.DAT\
+	tloop.DAT\
+	tstackh.DAT\
+	tstacki.DAT\
+	tstacke.DAT\
+	tstackm.DAT
+
+
+EXTRA_DIST = $(gtfold_data_DATA)
+
+CLEANFILES = *~
+
diff --git a/gtfold-mfe/data/RNAParams/Makefile.in b/gtfold-mfe/data/RNAParams/Makefile.in
new file mode 100644
index 0000000..6f1691d
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/Makefile.in
@@ -0,0 +1,399 @@
+# Makefile.in generated by automake 1.11 from Makefile.am.
+# @configure_input@
+
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005, 2006, 2007, 2008, 2009  Free Software Foundation,
+# Inc.
+# This Makefile.in is free software; the Free Software Foundation
+# gives unlimited permission to copy and/or distribute it,
+# with or without modifications, as long as this notice is preserved.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
+# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
+# PARTICULAR PURPOSE.
+
+@SET_MAKE@
+
+VPATH = @srcdir@
+pkgdatadir = $(datadir)/@PACKAGE@
+pkgincludedir = $(includedir)/@PACKAGE@
+pkglibdir = $(libdir)/@PACKAGE@
+pkglibexecdir = $(libexecdir)/@PACKAGE@
+am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
+install_sh_DATA = $(install_sh) -c -m 644
+install_sh_PROGRAM = $(install_sh) -c
+install_sh_SCRIPT = $(install_sh) -c
+INSTALL_HEADER = $(INSTALL_DATA)
+transform = $(program_transform_name)
+NORMAL_INSTALL = :
+PRE_INSTALL = :
+POST_INSTALL = :
+NORMAL_UNINSTALL = :
+PRE_UNINSTALL = :
+POST_UNINSTALL = :
+build_triplet = @build@
+host_triplet = @host@
+target_triplet = @target@
+subdir = data/RNAParams
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(install_sh) -d
+CONFIG_HEADER = $(top_builddir)/gtfold_config.h
+CONFIG_CLEAN_FILES =
+CONFIG_CLEAN_VPATH_FILES =
+SOURCES =
+DIST_SOURCES =
+am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
+am__vpath_adj = case $$p in \
+    $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
+    *) f=$$p;; \
+  esac;
+am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
+am__install_max = 40
+am__nobase_strip_setup = \
+  srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
+am__nobase_strip = \
+  for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
+am__nobase_list = $(am__nobase_strip_setup); \
+  for p in $$list; do echo "$$p $$p"; done | \
+  sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
+  $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
+    if (++n[$$2] == $(am__install_max)) \
+      { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
+    END { for (dir in files) print dir, files[dir] }'
+am__base_list = \
+  sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
+  sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
+am__installdirs = "$(DESTDIR)$(gtfold_datadir)"
+DATA = $(gtfold_data_DATA)
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
+ACLOCAL = @ACLOCAL@
+AMTAR = @AMTAR@
+AUTOCONF = @AUTOCONF@
+AUTOHEADER = @AUTOHEADER@
+AUTOMAKE = @AUTOMAKE@
+AWK = @AWK@
+CC = @CC@
+CCDEPMODE = @CCDEPMODE@
+CFLAGS = @CFLAGS@
+CPP = @CPP@
+CPPFLAGS = @CPPFLAGS@
+CXX = @CXX@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
+DEFS = @DEFS@
+DEPDIR = @DEPDIR@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
+EGREP = @EGREP@
+EXEEXT = @EXEEXT@
+GREP = @GREP@
+INSTALL = @INSTALL@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
+INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
+LTLIBOBJS = @LTLIBOBJS@
+MAKEINFO = @MAKEINFO@
+MKDIR_P = @MKDIR_P@
+OBJEXT = @OBJEXT@
+OPENMP_CFLAGS = @OPENMP_CFLAGS@
+PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
+PATH_SEPARATOR = @PATH_SEPARATOR@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
+STRIP = @STRIP@
+VERSION = @VERSION@
+abs_builddir = @abs_builddir@
+abs_srcdir = @abs_srcdir@
+abs_top_builddir = @abs_top_builddir@
+abs_top_srcdir = @abs_top_srcdir@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+am__include = @am__include@
+am__leading_dot = @am__leading_dot@
+am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+builddir = @builddir@
+datadir = @datadir@
+datarootdir = @datarootdir@
+docdir = @docdir@
+dvidir = @dvidir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
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diff --git a/gtfold-mfe/data/RNAParams/dangle.DAT b/gtfold-mfe/data/RNAParams/dangle.DAT
new file mode 100644
index 0000000..9fb7c28
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/dangle.DAT
@@ -0,0 +1,8 @@
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diff --git a/gtfold-mfe/data/RNAParams/int11.DAT b/gtfold-mfe/data/RNAParams/int11.DAT
new file mode 100644
index 0000000..96eabfd
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/int11.DAT
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diff --git a/gtfold-mfe/data/RNAParams/int21.DAT b/gtfold-mfe/data/RNAParams/int21.DAT
new file mode 100644
index 0000000..0dfe3c4
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/int21.DAT
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+5.50	5.50	5.50	5.50	4.80	4.80	4.80	4.80	4.80	4.80	4.80	4.80	5.50	5.50	5.50	5.50	5.50	5.50	5.50	5.50	5.50	5.50	5.50	5.50
+5.50	3.20	5.50	2.70	4.80	2.50	4.80	2.00	4.80	2.50	4.80	2.00	5.50	3.20	5.50	2.70	5.50	3.20	5.50	2.70	5.50	3.20	5.50	2.70
diff --git a/gtfold-mfe/data/RNAParams/int22.DAT b/gtfold-mfe/data/RNAParams/int22.DAT
new file mode 100644
index 0000000..9691143
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/int22.DAT
@@ -0,0 +1,576 @@
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.60  2.20  1.60  2.00  2.60  2.60  2.00  2.60  1.60  2.00  2.00 -0.20  2.00  2.30  1.10  1.80 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.10  1.50  2.00  2.50  2.50  2.00  2.50  1.50  2.00  1.90 -0.30  2.00  2.20  1.00  1.70 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.60  1.00  2.00  2.10  2.70  2.00  2.70  1.00  2.00  1.40  0.30  2.00  2.40  1.50  2.20 
+  2.30  0.90  2.10  2.00  1.30  2.30  2.00  2.30  2.10  2.00  1.70 -1.50  2.00  2.00 -0.20  2.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.30 -0.10  1.10  2.00  0.30  1.30  2.00  1.30  1.10  2.00  0.70 -2.50  2.00  1.00 -1.20  1.30 
+  2.70  1.20  2.40  2.00  1.70  1.70  2.00  1.70  2.40  2.00  2.00  0.70  2.00  1.40  1.90  0.80 
+  2.10  1.90  0.10  2.00  1.80  2.50  2.00  1.50  0.70  2.00  1.80  0.00  2.00  2.50  0.40  2.10 
+  2.00  1.70  0.00  2.00  1.70  1.70  2.00  0.70  0.60  2.00  1.60 -1.20  2.00  1.80 -0.80  1.00 
+  0.90  0.60 -1.10  2.00  0.60  1.60  2.00  0.70 -0.50  2.00  0.50 -0.50  2.00  1.70 -0.10  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.60 -0.10  2.00  1.60  1.60  2.00  0.60  0.50  2.00  1.50 -1.30  2.00  1.70 -0.90  0.90 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  0.90  0.60 -1.10  2.00  0.60  1.60  2.00  0.70 -0.50  2.00  0.50 -0.50  2.00  1.70 -0.10  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.40  1.20 -0.60  2.00  1.10  1.80  2.00  0.80  0.00  2.00  1.10 -0.70  2.00  1.80 -0.30  1.40 
+  1.70  0.40  0.50  2.00  0.40  1.40  2.00  0.50  1.10  2.00  1.30 -2.50  2.00  1.50 -2.10  1.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  0.70 -0.50 -0.50  2.00 -0.60  0.50  2.00 -0.50  0.10  2.00  0.40 -3.50  2.00  0.50 -3.10  0.50 
+  2.00  0.80  0.80  2.00  0.70  0.80  2.00 -0.20  1.50  2.00  1.70 -0.30  2.00  0.80  0.10  0.00 
+  2.00  1.90  1.00  2.00  2.40  2.80  2.00  2.70  1.00  2.00  1.80  0.30  2.00  2.70  1.80  2.20 
+  1.90  1.80  0.90  2.00  2.20  2.10  2.00  1.90  0.90  2.00  1.60 -0.80  2.00  1.90  0.70  1.00 
+  0.80  0.70 -0.20  2.00  1.10  2.00  2.00  1.80 -0.20  2.00  0.50 -0.10  2.00  1.80  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.70  0.80  2.00  2.10  2.00  2.00  1.80  0.80  2.00  1.50 -0.90  2.00  1.80  0.60  0.90 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  0.80  0.70 -0.20  2.00  1.10  2.00  2.00  1.80 -0.20  2.00  0.50 -0.10  2.00  1.80  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.30  1.20  0.30  2.00  1.70  2.10  2.00  2.00  0.30  2.00  1.10 -0.40  2.00  2.00  1.10  1.50 
+  1.60  0.50  1.40  2.00  0.90  1.80  2.00  1.60  1.40  2.00  1.30 -2.10  2.00  1.60 -0.60  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  0.60 -0.50  0.40  2.00  0.00  0.80  2.00  0.70  0.40  2.00  0.40 -3.10  2.00  0.70 -1.60  0.60 
+  1.90  0.80  1.80  2.00  1.30  1.10  2.00  1.00  1.80  2.00  1.70  0.00  2.00  1.00  1.60  0.10 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.60  2.40  1.40  2.00  2.50  2.30  2.00  2.30  1.40  2.00  1.90  0.20  2.00  2.30  1.20  1.50 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.30  1.30  2.00  2.40  2.20  2.00  2.20  1.30  2.00  1.80  0.10  2.00  2.20  1.10  1.40 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.80  0.80  2.00  1.90  2.40  2.00  2.40  0.80  2.00  1.40  0.70  2.00  2.40  1.60  2.00 
+  2.30  1.10  1.90  2.00  1.20  2.00  2.00  2.00  1.90  2.00  1.60 -1.10  2.00  2.00 -0.10  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.30  0.10  0.90  2.00  0.20  1.00  2.00  1.00  0.90  2.00  0.70 -2.10  2.00  1.00 -1.10  1.10 
+  2.70  1.40  2.20  2.00  1.50  1.40  2.00  1.40  2.20  2.00  2.00  1.10  2.00  1.40  2.00  0.60 
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.60  2.20  1.60  2.00  2.60  2.60  2.00  2.60  1.60  2.00  2.00 -0.20  2.00  2.30  1.10  1.80 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.10  1.50  2.00  2.50  2.50  2.00  2.50  1.50  2.00  1.90 -0.30  2.00  2.20  1.00  1.70 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.60  1.00  2.00  2.10  2.70  2.00  2.70  1.00  2.00  1.40  0.30  2.00  2.40  1.50  2.20 
+  2.30  0.90  2.10  2.00  1.30  2.30  2.00  2.30  2.10  2.00  1.70 -1.50  2.00  2.00 -0.20  2.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.30 -0.10  1.10  2.00  0.30  1.30  2.00  1.30  1.10  2.00  0.70 -2.50  2.00  1.00 -1.20  1.30 
+  2.70  1.20  2.40  2.00  1.70  1.70  2.00  1.70  2.40  2.00  2.00  0.70  2.00  1.40  1.90  0.80 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.60  2.40  1.40  2.00  2.50  2.30  2.00  2.30  1.40  2.00  1.90  0.20  2.00  2.30  1.20  1.50 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.30  1.30  2.00  2.40  2.20  2.00  2.20  1.30  2.00  1.80  0.10  2.00  2.20  1.10  1.40 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.80  0.80  2.00  1.90  2.40  2.00  2.40  0.80  2.00  1.40  0.70  2.00  2.40  1.60  2.00 
+  2.30  1.10  1.90  2.00  1.20  2.00  2.00  2.00  1.90  2.00  1.60 -1.10  2.00  2.00 -0.10  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.30  0.10  0.90  2.00  0.20  1.00  2.00  1.00  0.90  2.00  0.70 -2.10  2.00  1.00 -1.10  1.10 
+  2.70  1.40  2.20  2.00  1.50  1.40  2.00  1.40  2.20  2.00  2.00  1.10  2.00  1.40  2.00  0.60 
+  2.00  1.60  1.00  2.00  2.00  2.60  2.00  2.60  1.00  2.00  1.40  0.20  2.00  2.30  1.50  2.20 
+  2.40  1.90  1.30  2.00  2.40  2.40  2.00  2.40  1.30  2.00  1.70 -0.40  2.00  2.10  0.80  1.50 
+  1.00  0.60  0.00  2.00  1.00  2.00  2.00  2.00  0.00  2.00  0.40  0.00  2.00  1.70  1.30  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.50  0.90  2.00  1.90  1.90  2.00  1.90  0.90  2.00  1.30 -0.90  2.00  1.60  0.40  1.10 
+  2.80  1.80  2.20  2.00  2.20  2.20  2.00  2.20  2.20  2.00  2.20  0.40  2.00  1.90  1.70  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.60  2.00  2.00  2.10  2.10  2.00  2.10  2.00  2.00  2.00  0.30  2.00  1.80  1.50  1.20 
+  1.00  0.60  0.00  2.00  1.00  2.00  2.00  2.00  0.00  2.00  0.40  0.00  2.00  1.70  1.30  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.30  0.70  2.00  1.80  2.40  2.00  2.40  0.70  2.00  1.10  0.00  2.00  2.10  1.20  1.90 
+  1.80  0.40  1.60  2.00  0.80  1.80  2.00  1.80  1.60  2.00  1.20 -2.00  2.00  1.50 -0.70  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.60  2.00  2.00  2.10  2.10  2.00  2.10  2.00  2.00  2.00  0.30  2.00  1.80  1.50  1.20 
+  0.30 -1.10  0.10  2.00 -0.70  0.30  2.00  0.30  0.10  2.00 -0.30 -3.50  2.00  0.00 -2.20  0.30 
+  2.20  0.70  1.90  2.00  1.20  1.20  2.00  1.20  1.90  2.00  1.50  0.20  2.00  0.90  1.50  0.30 
+  0.50  1.10 -0.30  2.00  1.10  1.70  2.00  0.70  0.40  2.00  1.00  0.10  2.00  1.80 -0.50  1.50 
+  0.60  1.50  0.10  2.00  1.10  1.50  2.00  0.50  0.50  2.00  1.40 -0.70  2.00  1.50 -0.60  0.00 
+  0.00 -0.70 -1.60  2.00 -1.00 -0.60  2.00  0.20 -0.70  2.00  0.00 -0.80  2.00  1.20 -0.60  0.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.30  1.00 -0.70  2.00  1.00  1.00  2.00  0.00  0.70  2.00  0.90 -1.90  2.00  1.10 -1.50 -0.20 
+  2.20  1.30  0.70  2.00  1.90  1.30  2.00  0.30  0.70  2.00  1.80 -0.30  2.00  1.40 -0.20 -0.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.00  1.20  0.40  2.00  1.10  1.20  2.00  1.70  1.00  2.00  1.70 -0.70  2.00  1.20 -0.30  0.20 
+ -0.20 -0.40 -1.70  2.00  0.70  1.10  2.00  0.20 -0.50  2.00  0.00 -0.90  2.00  1.20 -1.30  0.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.10  0.90 -0.90  2.00  0.80  1.50  2.00  0.50 -0.20  2.00  0.80 -1.00  2.00  1.50 -0.60  1.10 
+  0.90  0.00  0.30  2.00 -0.10  1.00  2.00  0.00  0.60  2.00  0.90 -3.00  2.00  1.00 -2.40  0.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.00  1.20  0.40  2.00  1.10  1.20  2.00  0.20  0.50  2.00  1.70 -0.70  2.00  1.20 -0.10  0.40 
+ -0.10 -1.60 -1.60  2.00 -1.60 -0.60  2.00 -1.60 -0.60  2.00 -0.70 -4.40  2.00 -0.50 -4.10 -1.00 
+  1.40  0.30  0.50  2.00  0.30  0.30  2.00  0.10  1.40  2.00  1.20 -1.00  2.00  0.30  0.10  0.60 
+  1.30  1.20  0.30  2.00  1.60  2.10  2.00  1.90  0.30  2.00  1.00 -0.40  2.00  1.90  1.10  1.40 
+  1.60  1.50  0.60  2.00  2.00  1.80  2.00  1.70  0.60  2.00  1.40 -1.10  2.00  1.70  0.40  0.80 
+  0.30  0.20 -0.70  2.00  0.60  1.50  2.00  1.30 -0.70  2.00  0.00 -0.60  2.00  1.30  0.90  1.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.20  1.10  0.20  2.00  1.50  1.40  2.00  1.20  0.20  2.00  0.90 -1.50  2.00  1.20  0.00  0.30 
+  2.10  1.40  1.50  2.00  1.80  1.70  2.00  1.50  1.50  2.00  1.80 -0.20  2.00  1.50  1.30  0.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.20  1.30  2.00  1.70  1.50  2.00  1.40  1.30  2.00  1.70 -0.40  2.00  1.40  1.10  0.50 
+  0.30  0.20 -0.70  2.00  0.60  1.50  2.00  1.30 -0.70  2.00  0.00 -0.60  2.00  1.30  0.90  1.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.00  0.90  0.00  2.00  1.40  1.80  2.00  1.70  0.00  2.00  0.80 -0.70  2.00  1.70  0.90  1.20 
+  1.10  0.00  0.90  2.00  0.40  1.30  2.00  1.10  0.90  2.00  0.90 -2.60  2.00  1.10 -1.10  1.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.20  1.30  2.00  1.70  1.50  2.00  1.40  1.30  2.00  1.70 -0.40  2.00  1.40  1.10  0.50 
+ -0.40 -1.50 -0.60  2.00 -1.10 -0.20  2.00 -0.40 -0.60  2.00 -0.70 -4.20  2.00 -0.40 -2.60 -0.50 
+  1.40  0.30  1.30  2.00  0.80  0.60  2.00  0.50  1.30  2.00  1.20 -0.50  2.00  0.50  1.10 -0.40 
+  2.00  1.80  0.80  2.00  1.90  2.30  2.00  2.30  0.80  2.00  1.30  0.60  2.00  2.30  1.60  1.90 
+  2.40  2.10  1.10  2.00  2.20  2.10  2.00  2.10  1.10  2.00  1.70  0.00  2.00  2.10  0.90  1.30 
+  1.00  0.80 -0.20  2.00  0.90  1.70  2.00  1.70 -0.20  2.00  0.30  0.40  2.00  1.70  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.70  0.70  2.00  1.80  1.60  2.00  1.60  0.70  2.00  1.20 -0.50  2.00  1.60  0.50  0.80 
+  2.80  2.00  2.00  2.00  2.10  1.90  2.00  1.90  2.00  2.00  2.10  0.80  2.00  1.90  1.80  1.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.80  1.80  2.00  1.90  1.80  2.00  1.80  1.80  2.00  2.00  0.70  2.00  1.80  1.60  1.00 
+  1.00  0.80 -0.20  2.00  0.90  1.70  2.00  1.70 -0.20  2.00  0.30  0.40  2.00  1.70  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.50  0.50  2.00  1.60  2.10  2.00  2.10  0.50  2.00  1.10  0.40  2.00  2.10  1.30  1.70 
+  1.80  0.60  1.40  2.00  0.70  1.50  2.00  1.50  1.40  2.00  1.10 -1.60  2.00  1.50 -0.60  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.80  1.80  2.00  1.90  1.80  2.00  1.80  1.80  2.00  2.00  0.70  2.00  1.80  1.60  1.00 
+  0.30 -0.90 -0.10  2.00 -0.80  0.00  2.00  0.00 -0.10  2.00 -0.40 -3.10  2.00  0.00 -2.10  0.00 
+  2.20  0.90  1.80  2.00  1.00  0.90  2.00  0.90  1.80  2.00  1.50  0.60  2.00  0.90  1.60  0.10 
+  2.00  1.60  1.00  2.00  2.00  2.60  2.00  2.60  1.00  2.00  1.40  0.20  2.00  2.30  1.50  2.20 
+  2.40  1.90  1.30  2.00  2.40  2.40  2.00  2.40  1.30  2.00  1.70 -0.40  2.00  2.10  0.80  1.50 
+  1.00  0.60  0.00  2.00  1.00  2.00  2.00  2.00  0.00  2.00  0.40  0.00  2.00  1.70  1.30  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.50  0.90  2.00  1.90  1.90  2.00  1.90  0.90  2.00  1.30 -0.90  2.00  1.60  0.40  1.10 
+  2.80  1.80  2.20  2.00  2.20  2.20  2.00  2.20  2.20  2.00  2.20  0.40  2.00  1.90  1.70  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.60  2.00  2.00  2.10  2.10  2.00  2.10  2.00  2.00  2.00  0.30  2.00  1.80  1.50  1.20 
+  1.00  0.60  0.00  2.00  1.00  2.00  2.00  2.00  0.00  2.00  0.40  0.00  2.00  1.70  1.30  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.30  0.70  2.00  1.80  2.40  2.00  2.40  0.70  2.00  1.10  0.00  2.00  2.10  1.20  1.90 
+  1.80  0.40  1.60  2.00  0.80  1.80  2.00  1.80  1.60  2.00  1.20 -2.00  2.00  1.50 -0.70  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.60  2.00  2.00  2.10  2.10  2.00  2.10  2.00  2.00  2.00  0.30  2.00  1.80  1.50  1.20 
+  0.30 -1.10  0.10  2.00 -0.70  0.30  2.00  0.30  0.10  2.00 -0.30 -3.50  2.00  0.00 -2.20  0.30 
+  2.20  0.70  1.90  2.00  1.20  1.20  2.00  1.20  1.90  2.00  1.50  0.20  2.00  0.90  1.50  0.30 
+  2.00  1.80  0.80  2.00  1.90  2.30  2.00  2.30  0.80  2.00  1.30  0.60  2.00  2.30  1.60  1.90 
+  2.40  2.10  1.10  2.00  2.20  2.10  2.00  2.10  1.10  2.00  1.70  0.00  2.00  2.10  0.90  1.30 
+  1.00  0.80 -0.20  2.00  0.90  1.70  2.00  1.70 -0.20  2.00  0.30  0.40  2.00  1.70  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.70  0.70  2.00  1.80  1.60  2.00  1.60  0.70  2.00  1.20 -0.50  2.00  1.60  0.50  0.80 
+  2.80  2.00  2.00  2.00  2.10  1.90  2.00  1.90  2.00  2.00  2.10  0.80  2.00  1.90  1.80  1.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.80  1.80  2.00  1.90  1.80  2.00  1.80  1.80  2.00  2.00  0.70  2.00  1.80  1.60  1.00 
+  1.00  0.80 -0.20  2.00  0.90  1.70  2.00  1.70 -0.20  2.00  0.30  0.40  2.00  1.70  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.50  0.50  2.00  1.60  2.10  2.00  2.10  0.50  2.00  1.10  0.40  2.00  2.10  1.30  1.70 
+  1.80  0.60  1.40  2.00  0.70  1.50  2.00  1.50  1.40  2.00  1.10 -1.60  2.00  1.50 -0.60  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.80  1.80  2.00  1.90  1.80  2.00  1.80  1.80  2.00  2.00  0.70  2.00  1.80  1.60  1.00 
+  0.30 -0.90 -0.10  2.00 -0.80  0.00  2.00  0.00 -0.10  2.00 -0.40 -3.10  2.00  0.00 -2.10  0.00 
+  2.20  0.90  1.80  2.00  1.00  0.90  2.00  0.90  1.80  2.00  1.50  0.60  2.00  0.90  1.60  0.10 
+  2.10  1.70  1.10  2.00  2.10  2.70  2.00  2.70  1.10  2.00  1.50  0.30  2.00  2.40  1.60  2.30 
+  1.80  1.40  0.80  2.00  1.80  1.80  2.00  1.80  0.80  2.00  1.20 -1.00  2.00  1.50  0.30  1.00 
+  0.70  0.30 -0.30  2.00  0.70  1.70  2.00  1.70 -0.30  2.00  0.10 -0.30  2.00  1.40  1.00  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.40  0.80  2.00  1.90  1.90  2.00  1.90  0.80  2.00  1.20 -0.90  2.00  1.60  0.30  1.00 
+  2.50  1.40  1.80  2.00  1.90  1.90  2.00  1.90  1.80  2.00  1.80  0.10  2.00  1.60  1.30  1.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  1.50  1.90  2.00  1.90  1.90  2.00  1.90  1.90  2.00  1.90  0.10  2.00  1.60  1.40  1.10 
+  0.10 -0.30 -0.90  2.00  0.10  1.10  2.00  1.10 -0.90  2.00 -0.50 -0.90  2.00  0.80  0.40  1.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.30  0.70  2.00  1.80  2.40  2.00  2.40  0.70  2.00  1.10  0.00  2.00  2.10  1.20  1.90 
+  0.40 -1.10  0.10  2.00 -0.60  0.40  2.00  0.40  0.10  2.00 -0.30 -3.50  2.00  0.10 -2.20  0.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.50  0.40  0.90  2.00  0.90  0.90  2.00  0.90  0.90  2.00  0.80 -0.90  2.00  0.60  0.40  0.00 
+  0.00 -1.50 -0.30  2.00 -1.00  0.00  2.00  0.00 -0.30  2.00 -0.70 -3.90  2.00 -0.30 -2.60 -0.10 
+  2.10  0.70  1.90  2.00  1.10  1.10  2.00  1.10  1.90  2.00  1.50  0.10  2.00  0.80  1.40  0.30 
+  1.50  1.20 -0.50  2.00  1.20  1.80  2.00  0.80  0.10  2.00  1.10 -0.70  2.00  1.90 -0.30  1.50 
+  1.20  0.90 -0.80  2.00  0.90  0.90  2.00  0.00 -0.20  2.00  0.80 -2.00  2.00  1.00 -1.60  0.20 
+  0.10 -0.10 -1.90  2.00 -0.20  0.90  2.00 -0.10 -1.30  2.00 -0.20 -1.30  2.00  0.90 -0.90  0.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.20  1.00 -0.80  2.00  0.90  1.00  2.00  0.00 -0.10  2.00  0.90 -1.90  2.00  1.00 -1.50  0.20 
+  1.80  1.00  0.20  2.00  0.90  1.00  2.00  0.00  0.90  2.00  1.50 -0.90  2.00  1.00 -0.50  0.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.00  0.30  2.00  1.00  1.00  2.00  0.00  0.90  2.00  1.50 -0.90  2.00  1.10 -0.50  0.30 
+ -0.50 -0.80 -2.60  2.00 -0.80  0.20  2.00 -0.80 -1.90  2.00 -0.90 -1.90  2.00  0.30 -1.50  0.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.10  0.90 -0.90  2.00  0.80  1.50  2.00  0.50 -0.20  2.00  0.80 -1.00  2.00  1.50 -0.60  1.10 
+ -0.30 -1.50 -1.50  2.00 -1.60 -0.50  2.00 -1.50 -0.90  2.00 -0.60 -4.50  2.00 -0.50 -4.10 -0.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  0.80  0.00 -0.80  2.00  0.00  0.00  2.00 -1.00 -0.10  2.00  0.50 -1.90  2.00  0.00 -1.50 -0.70 
+ -0.70 -1.90 -1.90  2.00 -2.00 -0.90  2.00 -1.90 -1.30  2.00 -1.00 -4.90  2.00 -0.90 -4.50 -0.90 
+  1.50  0.20  0.30  2.00  0.20  0.20  2.00 -0.70  0.90  2.00  1.10 -0.90  2.00  0.30 -0.50 -0.50 
+  0.50  1.30 -0.20  2.00  0.60  2.20  2.00  2.00  0.00  2.00  1.10 -0.10  2.00  2.00  0.90  1.40 
+  1.10  1.00  0.70  2.00  1.10  1.90  2.00  1.10 -1.00  2.00  0.80 -1.60  2.00  1.10 -0.10  0.30 
+  0.40  0.70 -0.50  2.00  0.50  0.70  2.00  0.50 -0.70  2.00 -0.20 -0.60  2.00  1.00  0.60  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.10  1.00 -0.40  2.00  1.50  1.30  2.00  1.20 -0.70  2.00  0.90 -1.60  2.00  1.20  0.00  0.30 
+  1.70  1.00  1.10  2.00  1.50  1.30  2.00  1.20 -0.60  2.00  1.50 -0.60  2.00  1.20  1.00  0.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.10  1.20  2.00  1.50  1.40  2.00  1.20  1.20  2.00  1.50 -0.50  2.00  1.20  1.00  0.30 
+ -0.30 -0.70 -1.70  2.00  0.10  0.70  2.00  0.40 -1.60  2.00 -0.90 -1.60  2.00  0.40  0.30  0.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.00  0.90  0.00  2.00  1.40  1.80  2.00  1.70  0.00  2.00  0.80 -0.70  2.00  1.70  0.90  1.20 
+ -0.50 -1.50 -1.30  2.00 -0.60 -0.20  2.00 -0.10 -0.60  2.00 -0.60 -4.10  2.00 -0.30 -2.40  0.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  0.70  0.00  0.20  2.00  0.50  0.30  2.00  0.20  0.20  2.00  0.50 -1.60  2.00  1.70  0.00  0.10 
+  0.10 -1.90 -0.90  2.00 -0.70 -0.30  2.00 -0.70 -0.80  2.00 -1.00 -4.40  2.00 -0.70 -3.00 -1.00 
+  1.50 -0.20  0.90  2.00  0.00 -0.10  2.00  0.40  0.90  2.00  1.10 -1.00  2.00  0.20  0.60  0.60 
+  2.10  1.90  0.90  2.00  2.00  2.40  2.00  2.40  0.90  2.00  1.40  0.70  2.00  2.40  1.70  2.00 
+  1.80  1.60  0.60  2.00  1.70  1.50  2.00  1.50  0.60  2.00  1.10 -0.60  2.00  1.50  0.40  0.70 
+  0.70  0.50 -0.50  2.00  0.60  1.40  2.00  1.40 -0.50  2.00  0.00  0.10  2.00  1.40  1.10  1.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.60  0.60  2.00  1.70  1.60  2.00  1.60  0.60  2.00  1.20 -0.50  2.00  1.60  0.40  0.80 
+  2.50  1.60  1.60  2.00  1.70  1.60  2.00  1.60  1.60  2.00  1.80  0.50  2.00  1.60  1.40  0.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  1.70  1.70  2.00  1.80  1.60  2.00  1.60  1.70  2.00  1.80  0.50  2.00  1.60  1.50  0.80 
+  0.10 -0.10 -1.10  2.00  0.00  0.80  2.00  0.80 -1.10  2.00 -0.60 -0.50  2.00  0.80  0.50  0.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.50  0.50  2.00  1.60  2.10  2.00  2.10  0.50  2.00  1.10  0.40  2.00  2.10  1.30  1.70 
+  0.40 -0.90 -0.10  2.00 -0.80  0.10  2.00  0.10 -0.10  2.00 -0.30 -3.10  2.00  0.10 -2.10  0.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.50  0.60  0.70  2.00  0.70  0.60  2.00  0.60  0.70  2.00  0.80 -0.50  2.00  0.60  0.50 -0.20 
+  0.00 -1.30 -0.50  2.00 -1.20 -0.30  2.00 -0.30 -0.50  2.00 -0.70 -3.50  2.00 -0.30 -2.50 -0.30 
+  2.10  0.90  1.70  2.00  1.00  0.80  2.00  0.80  1.70  2.00  1.40  0.50  2.00  0.80  1.50  0.00 
+  2.10  1.70  1.10  2.00  2.10  2.70  2.00  2.70  1.10  2.00  1.50  0.30  2.00  2.40  1.60  2.30 
+  1.80  1.40  0.80  2.00  1.80  1.80  2.00  1.80  0.80  2.00  1.20 -1.00  2.00  1.50  0.30  1.00 
+  0.70  0.30 -0.30  2.00  0.70  1.70  2.00  1.70 -0.30  2.00  0.10 -0.30  2.00  1.40  1.00  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.40  0.80  2.00  1.90  1.90  2.00  1.90  0.80  2.00  1.20 -0.90  2.00  1.60  0.30  1.00 
+  2.50  1.40  1.80  2.00  1.90  1.90  2.00  1.90  1.80  2.00  1.80  0.10  2.00  1.60  1.30  1.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  1.50  1.90  2.00  1.90  1.90  2.00  1.90  1.90  2.00  1.90  0.10  2.00  1.60  1.40  1.10 
+  0.10 -0.30 -0.90  2.00  0.10  1.10  2.00  1.10 -0.90  2.00 -0.50 -0.90  2.00  0.80  0.40  1.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.30  0.70  2.00  1.80  2.40  2.00  2.40  0.70  2.00  1.10  0.00  2.00  2.10  1.20  1.90 
+  0.40 -1.10  0.10  2.00 -0.60  0.40  2.00  0.40  0.10  2.00 -0.30 -3.50  2.00  0.10 -2.20  0.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.50  0.40  0.90  2.00  0.90  0.90  2.00  0.90  0.90  2.00  0.80 -0.90  2.00  0.60  0.40  0.00 
+  0.00 -1.50 -0.30  2.00 -1.00  0.00  2.00  0.00 -0.30  2.00 -0.70 -3.90  2.00 -0.30 -2.60 -0.10 
+  2.10  0.70  1.90  2.00  1.10  1.10  2.00  1.10  1.90  2.00  1.50  0.10  2.00  0.80  1.40  0.30 
+  2.10  1.90  0.90  2.00  2.00  2.40  2.00  2.40  0.90  2.00  1.40  0.70  2.00  2.40  1.70  2.00 
+  1.80  1.60  0.60  2.00  1.70  1.50  2.00  1.50  0.60  2.00  1.10 -0.60  2.00  1.50  0.40  0.70 
+  0.70  0.50 -0.50  2.00  0.60  1.40  2.00  1.40 -0.50  2.00  0.00  0.10  2.00  1.40  1.10  1.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.60  0.60  2.00  1.70  1.60  2.00  1.60  0.60  2.00  1.20 -0.50  2.00  1.60  0.40  0.80 
+  2.50  1.60  1.60  2.00  1.70  1.60  2.00  1.60  1.60  2.00  1.80  0.50  2.00  1.60  1.40  0.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  1.70  1.70  2.00  1.80  1.60  2.00  1.60  1.70  2.00  1.80  0.50  2.00  1.60  1.50  0.80 
+  0.10 -0.10 -1.10  2.00  0.00  0.80  2.00  0.80 -1.10  2.00 -0.60 -0.50  2.00  0.80  0.50  0.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.50  0.50  2.00  1.60  2.10  2.00  2.10  0.50  2.00  1.10  0.40  2.00  2.10  1.30  1.70 
+  0.40 -0.90 -0.10  2.00 -0.80  0.10  2.00  0.10 -0.10  2.00 -0.30 -3.10  2.00  0.10 -2.10  0.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.50  0.60  0.70  2.00  0.70  0.60  2.00  0.60  0.70  2.00  0.80 -0.50  2.00  0.60  0.50 -0.20 
+  0.00 -1.30 -0.50  2.00 -1.20 -0.30  2.00 -0.30 -0.50  2.00 -0.70 -3.50  2.00 -0.30 -2.50 -0.30 
+  2.10  0.90  1.70  2.00  1.00  0.80  2.00  0.80  1.70  2.00  1.40  0.50  2.00  0.80  1.50  0.00 
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.80  2.30  1.70  2.00  2.80  2.80  2.00  2.80  1.70  2.00  2.10  0.00  2.00  2.50  1.20  1.90 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.90  1.30  2.00  2.30  2.30  2.00  2.30  1.30  2.00  1.70 -0.50  2.00  2.00  0.80  1.50 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.70  1.10  2.00  2.10  2.70  2.00  2.70  1.10  2.00  1.50  0.30  2.00  2.40  1.60  2.30 
+  2.20  0.80  2.00  2.00  1.20  2.20  2.00  2.20  2.00  2.00  1.60 -1.60  2.00  1.90 -0.30  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  1.00 -0.50  0.70  2.00  0.00  1.00  2.00  1.00  0.70  2.00  0.30 -2.90  2.00  0.70 -1.60  0.90 
+  2.90  1.50  2.70  2.00  1.90  1.90  2.00  1.90  2.70  2.00  2.30  0.90  2.00  1.60  2.20  1.10 
+  2.10  1.90  0.10  2.00  1.80  2.50  2.00  1.50  0.70  2.00  1.80  0.00  2.00  2.50  0.40  2.10 
+  2.10  1.90  0.10  2.00  1.80  1.90  2.00  0.90  0.70  2.00  1.80 -1.00  2.00  1.90 -0.60  1.10 
+  1.10  0.80 -0.90  2.00  0.80  1.80  2.00  0.90 -0.30  2.00  0.70 -0.30  2.00  1.90  0.10  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.70  1.40 -0.30  2.00  1.40  1.40  2.00  0.40  0.30  2.00  1.30 -1.50  2.00  1.50 -1.10  0.70 
+  2.70  1.90  1.10  2.00  1.80  1.90  2.00  0.90  1.70  2.00  2.40  0.00  2.00  1.90  0.40  1.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  1.10  0.80 -0.90  2.00  0.80  1.80  2.00  0.90 -0.30  2.00  0.70 -0.30  2.00  1.90  0.10  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.50  1.20 -0.50  2.00  1.20  1.80  2.00  0.80  0.10  2.00  1.10 -0.70  2.00  1.90 -0.30  1.50 
+  1.60  0.30  0.40  2.00  0.30  1.30  2.00  0.40  1.00  2.00  1.20 -2.60  2.00  1.40 -2.20  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.90  1.10  2.00  1.80  1.90  2.00  0.90  1.70  2.00  2.40  0.00  2.00  1.90  0.40  1.10 
+  0.30 -0.90 -0.90  2.00 -1.00  0.10  2.00 -0.90 -0.30  2.00  0.00 -3.90  2.00  0.10 -3.50  0.10 
+  2.30  1.00  1.10  2.00  1.00  1.00  2.00  0.00  1.70  2.00  1.90 -0.10  2.00  1.10  0.30  0.30 
+  2.00  1.90  1.00  2.00  2.40  2.80  2.00  2.70  1.00  2.00  1.80  0.30  2.00  2.70  1.80  2.20 
+  2.00  1.90  1.00  2.00  2.40  2.20  2.00  2.10  1.00  2.00  1.80 -0.70  2.00  2.10  0.80  1.20 
+  1.00  0.90  0.00  2.00  1.30  2.20  2.00  2.00  0.00  2.00  0.70  0.10  2.00  2.00  1.60  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.60  1.50  0.60  2.00  1.90  1.80  2.00  1.60  0.60  2.00  1.30 -1.10  2.00  1.60  0.40  0.70 
+  2.60  1.90  2.00  2.00  2.40  2.20  2.00  2.10  2.00  2.00  2.40  0.30  2.00  2.10  1.80  1.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  1.00  0.90  0.00  2.00  1.30  2.20  2.00  2.00  0.00  2.00  0.70  0.10  2.00  2.00  1.60  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.40  1.30  0.40  2.00  1.70  2.20  2.00  2.00  0.40  2.00  1.10 -0.30  2.00  2.00  1.20  1.50 
+  1.50  0.40  1.30  2.00  0.80  1.70  2.00  1.50  1.30  2.00  1.20 -2.20  2.00  1.50 -0.70  1.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.60  1.90  2.00  2.00  2.40  2.20  2.00  2.10  2.00  2.00  2.40  0.30  2.00  2.10  1.80  1.20 
+  0.20 -0.90  0.00  2.00 -0.40  0.40  2.00  0.30  0.00  2.00  0.00 -3.50  2.00  0.30 -2.00  0.20 
+  2.20  1.10  2.00  2.00  1.50  1.40  2.00  1.20  2.00  2.00  1.90  0.30  2.00  1.20  1.80  0.30 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.80  2.50  1.50  2.00  2.60  2.50  2.00  2.50  1.50  2.00  2.10  0.30  2.00  2.50  1.30  1.70 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  2.10  1.10  2.00  2.20  2.00  2.00  2.00  1.10  2.00  1.60 -0.10  2.00  2.00  0.90  1.20 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.90  0.90  2.00  2.00  2.40  2.00  2.40  0.90  2.00  1.40  0.70  2.00  2.40  1.70  2.00 
+  2.20  1.00  1.80  2.00  1.10  1.90  2.00  1.90  1.80  2.00  1.50 -1.20  2.00  1.90 -0.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  1.00 -0.30  0.50  2.00 -0.20  0.70  2.00  0.70  0.50  2.00  0.30 -2.50  2.00  0.70 -1.50  0.70 
+  2.90  1.70  2.50  2.00  1.80  1.60  2.00  1.60  2.50  2.00  2.20  1.30  2.00  1.60  2.30  0.80 
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.80  2.30  1.70  2.00  2.80  2.80  2.00  2.80  1.70  2.00  2.10  0.00  2.00  2.50  1.20  1.90 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.90  1.30  2.00  2.30  2.30  2.00  2.30  1.30  2.00  1.70 -0.50  2.00  2.00  0.80  1.50 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.70  1.10  2.00  2.10  2.70  2.00  2.70  1.10  2.00  1.50  0.30  2.00  2.40  1.60  2.30 
+  2.20  0.80  2.00  2.00  1.20  2.20  2.00  2.20  2.00  2.00  1.60 -1.60  2.00  1.90 -0.30  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  1.00 -0.50  0.70  2.00  0.00  1.00  2.00  1.00  0.70  2.00  0.30 -2.90  2.00  0.70 -1.60  0.90 
+  2.90  1.50  2.70  2.00  1.90  1.90  2.00  1.90  2.70  2.00  2.30  0.90  2.00  1.60  2.20  1.10 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.80  2.50  1.50  2.00  2.60  2.50  2.00  2.50  1.50  2.00  2.10  0.30  2.00  2.50  1.30  1.70 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  2.10  1.10  2.00  2.20  2.00  2.00  2.00  1.10  2.00  1.60 -0.10  2.00  2.00  0.90  1.20 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.90  0.90  2.00  2.00  2.40  2.00  2.40  0.90  2.00  1.40  0.70  2.00  2.40  1.70  2.00 
+  2.20  1.00  1.80  2.00  1.10  1.90  2.00  1.90  1.80  2.00  1.50 -1.20  2.00  1.90 -0.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  1.00 -0.30  0.50  2.00 -0.20  0.70  2.00  0.70  0.50  2.00  0.30 -2.50  2.00  0.70 -1.50  0.70 
+  2.90  1.70  2.50  2.00  1.80  1.60  2.00  1.60  2.50  2.00  2.20  1.30  2.00  1.60  2.30  0.80 
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.60  2.20  1.60  2.00  2.60  2.60  2.00  2.60  1.60  2.00  2.00 -0.20  2.00  2.30  1.10  1.80 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.10  1.50  2.00  2.50  2.50  2.00  2.50  1.50  2.00  1.90 -0.30  2.00  2.20  1.00  1.70 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.60  1.00  2.00  2.10  2.70  2.00  2.70  1.00  2.00  1.40  0.30  2.00  2.40  1.50  2.20 
+  2.30  0.90  2.10  2.00  1.30  2.30  2.00  2.30  2.10  2.00  1.70 -1.50  2.00  2.00 -0.20  2.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.30 -0.10  1.10  2.00  0.30  1.30  2.00  1.30  1.10  2.00  0.70 -2.50  2.00  1.00 -1.20  1.30 
+  2.70  1.20  2.40  2.00  1.70  1.70  2.00  1.70  2.40  2.00  2.00  0.70  2.00  1.40  1.90  0.80 
+  2.10  1.90  0.10  2.00  1.80  2.50  2.00  1.50  0.70  2.00  1.80  0.00  2.00  2.50  0.40  2.10 
+  2.00  1.70  0.00  2.00  1.70  1.70  2.00  0.70  0.60  2.00  1.60 -1.20  2.00  1.80 -0.80  1.00 
+  0.90  0.60 -1.10  2.00  0.60  1.60  2.00  0.70 -0.50  2.00  0.50 -0.50  2.00  1.70 -0.10  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.90  1.60 -0.10  2.00  1.60  1.60  2.00  0.60  0.50  2.00  1.50 -1.30  2.00  1.70 -0.90  0.90 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  0.90  0.60 -1.10  2.00  0.60  1.60  2.00  0.70 -0.50  2.00  0.50 -0.50  2.00  1.70 -0.10  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.40  1.20 -0.60  2.00  1.10  1.80  2.00  0.80  0.00  2.00  1.10 -0.70  2.00  1.80 -0.30  1.40 
+  1.70  0.40  0.50  2.00  0.40  1.40  2.00  0.50  1.10  2.00  1.30 -2.50  2.00  1.50 -2.10  1.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  0.70 -0.50 -0.50  2.00 -0.60  0.50  2.00 -0.50  0.10  2.00  0.40 -3.50  2.00  0.50 -3.10  0.50 
+  2.00  0.80  0.80  2.00  0.70  0.80  2.00 -0.20  1.50  2.00  1.70 -0.30  2.00  0.80  0.10  0.00 
+  2.00  1.90  1.00  2.00  2.40  2.80  2.00  2.70  1.00  2.00  1.80  0.30  2.00  2.70  1.80  2.20 
+  1.90  1.80  0.90  2.00  2.20  2.10  2.00  1.90  0.90  2.00  1.60 -0.80  2.00  1.90  0.70  1.00 
+  0.80  0.70 -0.20  2.00  1.10  2.00  2.00  1.80 -0.20  2.00  0.50 -0.10  2.00  1.80  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.80  1.70  0.80  2.00  2.10  2.00  2.00  1.80  0.80  2.00  1.50 -0.90  2.00  1.80  0.60  0.90 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  0.80  0.70 -0.20  2.00  1.10  2.00  2.00  1.80 -0.20  2.00  0.50 -0.10  2.00  1.80  1.40  1.80 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.30  1.20  0.30  2.00  1.70  2.10  2.00  2.00  0.30  2.00  1.10 -0.40  2.00  2.00  1.10  1.50 
+  1.60  0.50  1.40  2.00  0.90  1.80  2.00  1.60  1.40  2.00  1.30 -2.10  2.00  1.60 -0.60  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  0.60 -0.50  0.40  2.00  0.00  0.80  2.00  0.70  0.40  2.00  0.40 -3.10  2.00  0.70 -1.60  0.60 
+  1.90  0.80  1.80  2.00  1.30  1.10  2.00  1.00  1.80  2.00  1.70  0.00  2.00  1.00  1.60  0.10 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.60  2.40  1.40  2.00  2.50  2.30  2.00  2.30  1.40  2.00  1.90  0.20  2.00  2.30  1.20  1.50 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.30  1.30  2.00  2.40  2.20  2.00  2.20  1.30  2.00  1.80  0.10  2.00  2.20  1.10  1.40 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.80  0.80  2.00  1.90  2.40  2.00  2.40  0.80  2.00  1.40  0.70  2.00  2.40  1.60  2.00 
+  2.30  1.10  1.90  2.00  1.20  2.00  2.00  2.00  1.90  2.00  1.60 -1.10  2.00  2.00 -0.10  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.30  0.10  0.90  2.00  0.20  1.00  2.00  1.00  0.90  2.00  0.70 -2.10  2.00  1.00 -1.10  1.10 
+  2.70  1.40  2.20  2.00  1.50  1.40  2.00  1.40  2.20  2.00  2.00  1.10  2.00  1.40  2.00  0.60 
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.60  2.20  1.60  2.00  2.60  2.60  2.00  2.60  1.60  2.00  2.00 -0.20  2.00  2.30  1.10  1.80 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.10  1.50  2.00  2.50  2.50  2.00  2.50  1.50  2.00  1.90 -0.30  2.00  2.20  1.00  1.70 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.50  1.10  0.50  2.00  1.50  2.50  2.00  2.50  0.50  2.00  0.90  0.50  2.00  2.20  1.80  2.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.60  1.00  2.00  2.10  2.70  2.00  2.70  1.00  2.00  1.40  0.30  2.00  2.40  1.50  2.20 
+  2.30  0.90  2.10  2.00  1.30  2.30  2.00  2.30  2.10  2.00  1.70 -1.50  2.00  2.00 -0.20  2.30 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.30 -0.10  1.10  2.00  0.30  1.30  2.00  1.30  1.10  2.00  0.70 -2.50  2.00  1.00 -1.20  1.30 
+  2.70  1.20  2.40  2.00  1.70  1.70  2.00  1.70  2.40  2.00  2.00  0.70  2.00  1.40  1.90  0.80 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.60  2.40  1.40  2.00  2.50  2.30  2.00  2.30  1.40  2.00  1.90  0.20  2.00  2.30  1.20  1.50 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.50  2.30  1.30  2.00  2.40  2.20  2.00  2.20  1.30  2.00  1.80  0.10  2.00  2.20  1.10  1.40 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.50  1.30  0.30  2.00  1.40  2.20  2.00  2.20  0.30  2.00  0.80  0.90  2.00  2.20  1.90  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.80  0.80  2.00  1.90  2.40  2.00  2.40  0.80  2.00  1.40  0.70  2.00  2.40  1.60  2.00 
+  2.30  1.10  1.90  2.00  1.20  2.00  2.00  2.00  1.90  2.00  1.60 -1.10  2.00  2.00 -0.10  2.00 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.30  0.10  0.90  2.00  0.20  1.00  2.00  1.00  0.90  2.00  0.70 -2.10  2.00  1.00 -1.10  1.10 
+  2.70  1.40  2.20  2.00  1.50  1.40  2.00  1.40  2.20  2.00  2.00  1.10  2.00  1.40  2.00  0.60 
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.80  2.30  1.70  2.00  2.80  2.80  2.00  2.80  1.70  2.00  2.10  0.00  2.00  2.50  1.20  1.90 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.90  1.30  2.00  2.30  2.30  2.00  2.30  1.30  2.00  1.70 -0.50  2.00  2.00  0.80  1.50 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.70  1.10  2.00  2.10  2.70  2.00  2.70  1.10  2.00  1.50  0.30  2.00  2.40  1.60  2.30 
+  2.20  0.80  2.00  2.00  1.20  2.20  2.00  2.20  2.00  2.00  1.60 -1.60  2.00  1.90 -0.30  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  1.00 -0.50  0.70  2.00  0.00  1.00  2.00  1.00  0.70  2.00  0.30 -2.90  2.00  0.70 -1.60  0.90 
+  2.90  1.50  2.70  2.00  1.90  1.90  2.00  1.90  2.70  2.00  2.30  0.90  2.00  1.60  2.20  1.10 
+  2.10  1.90  0.10  2.00  1.80  2.50  2.00  1.50  0.70  2.00  1.80  0.00  2.00  2.50  0.40  2.10 
+  2.10  1.90  0.10  2.00  1.80  1.90  2.00  0.90  0.70  2.00  1.80 -1.00  2.00  1.90 -0.60  1.10 
+  1.10  0.80 -0.90  2.00  0.80  1.80  2.00  0.90 -0.30  2.00  0.70 -0.30  2.00  1.90  0.10  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.70  1.40 -0.30  2.00  1.40  1.40  2.00  0.40  0.30  2.00  1.30 -1.50  2.00  1.50 -1.10  0.70 
+  2.70  1.90  1.10  2.00  1.80  1.90  2.00  0.90  1.70  2.00  2.40  0.00  2.00  1.90  0.40  1.10 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.40  1.60  0.80  2.00  1.50  1.60  2.00  0.60  1.40  2.00  2.10 -0.30  2.00  1.60  0.10  0.80 
+  1.10  0.80 -0.90  2.00  0.80  1.80  2.00  0.90 -0.30  2.00  0.70 -0.30  2.00  1.90  0.10  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.50  1.20 -0.50  2.00  1.20  1.80  2.00  0.80  0.10  2.00  1.10 -0.70  2.00  1.90 -0.30  1.50 
+  1.60  0.30  0.40  2.00  0.30  1.30  2.00  0.40  1.00  2.00  1.20 -2.60  2.00  1.40 -2.20  1.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.70  1.90  1.10  2.00  1.80  1.90  2.00  0.90  1.70  2.00  2.40  0.00  2.00  1.90  0.40  1.10 
+  0.30 -0.90 -0.90  2.00 -1.00  0.10  2.00 -0.90 -0.30  2.00  0.00 -3.90  2.00  0.10 -3.50  0.10 
+  2.30  1.00  1.10  2.00  1.00  1.00  2.00  0.00  1.70  2.00  1.90 -0.10  2.00  1.10  0.30  0.30 
+  2.00  1.90  1.00  2.00  2.40  2.80  2.00  2.70  1.00  2.00  1.80  0.30  2.00  2.70  1.80  2.20 
+  2.00  1.90  1.00  2.00  2.40  2.20  2.00  2.10  1.00  2.00  1.80 -0.70  2.00  2.10  0.80  1.20 
+  1.00  0.90  0.00  2.00  1.30  2.20  2.00  2.00  0.00  2.00  0.70  0.10  2.00  2.00  1.60  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.60  1.50  0.60  2.00  1.90  1.80  2.00  1.60  0.60  2.00  1.30 -1.10  2.00  1.60  0.40  0.70 
+  2.60  1.90  2.00  2.00  2.40  2.20  2.00  2.10  2.00  2.00  2.40  0.30  2.00  2.10  1.80  1.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.60  1.70  2.00  2.10  1.90  2.00  1.80  1.70  2.00  2.10  0.00  2.00  1.80  1.50  0.90 
+  1.00  0.90  0.00  2.00  1.30  2.20  2.00  2.00  0.00  2.00  0.70  0.10  2.00  2.00  1.60  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  1.40  1.30  0.40  2.00  1.70  2.20  2.00  2.00  0.40  2.00  1.10 -0.30  2.00  2.00  1.20  1.50 
+  1.50  0.40  1.30  2.00  0.80  1.70  2.00  1.50  1.30  2.00  1.20 -2.20  2.00  1.50 -0.70  1.50 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.60  1.90  2.00  2.00  2.40  2.20  2.00  2.10  2.00  2.00  2.40  0.30  2.00  2.10  1.80  1.20 
+  0.20 -0.90  0.00  2.00 -0.40  0.40  2.00  0.30  0.00  2.00  0.00 -3.50  2.00  0.30 -2.00  0.20 
+  2.20  1.10  2.00  2.00  1.50  1.40  2.00  1.20  2.00  2.00  1.90  0.30  2.00  1.20  1.80  0.30 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.80  2.50  1.50  2.00  2.60  2.50  2.00  2.50  1.50  2.00  2.10  0.30  2.00  2.50  1.30  1.70 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  2.10  1.10  2.00  2.20  2.00  2.00  2.00  1.10  2.00  1.60 -0.10  2.00  2.00  0.90  1.20 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.90  0.90  2.00  2.00  2.40  2.00  2.40  0.90  2.00  1.40  0.70  2.00  2.40  1.70  2.00 
+  2.20  1.00  1.80  2.00  1.10  1.90  2.00  1.90  1.80  2.00  1.50 -1.20  2.00  1.90 -0.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  1.00 -0.30  0.50  2.00 -0.20  0.70  2.00  0.70  0.50  2.00  0.30 -2.50  2.00  0.70 -1.50  0.70 
+  2.90  1.70  2.50  2.00  1.80  1.60  2.00  1.60  2.50  2.00  2.20  1.30  2.00  1.60  2.30  0.80 
+  2.80  2.30  1.70  2.00  2.80  3.40  2.00  3.40  1.70  2.00  2.10  1.00  2.00  3.10  2.20  2.90 
+  2.80  2.30  1.70  2.00  2.80  2.80  2.00  2.80  1.70  2.00  2.10  0.00  2.00  2.50  1.20  1.90 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  1.90  1.30  2.00  2.30  2.30  2.00  2.30  1.30  2.00  1.70 -0.50  2.00  2.00  0.80  1.50 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.00  2.40  2.00  2.50  2.50  2.00  2.50  2.40  2.00  2.40  0.70  2.00  2.20  1.90  1.60 
+  1.70  1.30  0.70  2.00  1.70  2.70  2.00  2.70  0.70  2.00  1.10  0.70  2.00  2.40  2.00  2.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.70  1.10  2.00  2.10  2.70  2.00  2.70  1.10  2.00  1.50  0.30  2.00  2.40  1.60  2.30 
+  2.20  0.80  2.00  2.00  1.20  2.20  2.00  2.20  2.00  2.00  1.60 -1.60  2.00  1.90 -0.30  2.20 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.30  2.70  2.00  2.80  2.80  2.00  2.80  2.70  2.00  2.70  1.00  2.00  2.50  2.20  1.90 
+  1.00 -0.50  0.70  2.00  0.00  1.00  2.00  1.00  0.70  2.00  0.30 -2.90  2.00  0.70 -1.60  0.90 
+  2.90  1.50  2.70  2.00  1.90  1.90  2.00  1.90  2.70  2.00  2.30  0.90  2.00  1.60  2.20  1.10 
+  2.80  2.50  1.50  2.00  2.60  3.10  2.00  3.10  1.50  2.00  2.10  1.30  2.00  3.10  2.30  2.70 
+  2.80  2.50  1.50  2.00  2.60  2.50  2.00  2.50  1.50  2.00  2.10  0.30  2.00  2.50  1.30  1.70 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.30  2.10  1.10  2.00  2.20  2.00  2.00  2.00  1.10  2.00  1.60 -0.10  2.00  2.00  0.90  1.20 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.10  2.20  2.20  2.00  2.30  2.20  2.00  2.20  2.20  2.00  2.40  1.00  2.00  2.20  2.00  1.40 
+  1.70  1.50  0.50  2.00  1.60  2.40  2.00  2.40  0.50  2.00  1.00  1.10  2.00  2.40  2.10  2.40 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  2.10  1.90  0.90  2.00  2.00  2.40  2.00  2.40  0.90  2.00  1.40  0.70  2.00  2.40  1.70  2.00 
+  2.20  1.00  1.80  2.00  1.10  1.90  2.00  1.90  1.80  2.00  1.50 -1.20  2.00  1.90 -0.20  1.90 
+  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00  2.00 
+  3.40  2.50  2.50  2.00  2.60  2.50  2.00  2.50  2.50  2.00  2.70  1.30  2.00  2.50  2.30  1.70 
+  1.00 -0.30  0.50  2.00 -0.20  0.70  2.00  0.70  0.50  2.00  0.30 -2.50  2.00  0.70 -1.50  0.70 
+  2.90  1.70  2.50  2.00  1.80  1.60  2.00  1.60  2.50  2.00  2.20  1.30  2.00  1.60  2.30  0.80
diff --git a/gtfold-mfe/data/RNAParams/loop.DAT b/gtfold-mfe/data/RNAParams/loop.DAT
new file mode 100644
index 0000000..98c1285
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/loop.DAT
@@ -0,0 +1,30 @@
+1	inf		3.80	inf
+2	4.10	2.80	inf
+3	5.10	3.20	5.70
+4	1.70	3.60	5.60
+5	1.80	4.00	5.60
+6	2.00	4.40	5.40
+7	2.20	4.59	5.90
+8	2.30	4.70	5.60
+9	2.40	4.80	6.40
+10	2.50	4.90	6.50
+11	2.60	5.00	6.60
+12	2.70	5.10	6.70
+13	2.78	5.19	6.78
+14	2.86	5.27	6.86
+15	2.94	5.34	6.94
+16	3.01	5.41	7.01
+17	3.07	5.48	7.07
+18	3.13	5.54	7.13
+19	3.19	5.60	7.19
+20	3.25	5.65	7.25
+21	3.30	5.71	7.30
+22	3.35	5.76	7.35
+23	3.40	5.80	7.40
+24	3.45	5.85	7.44
+25	3.49	5.89	7.49
+26	3.53	5.94	7.53
+27	3.57	5.98	7.57
+28	3.61	6.02	7.61
+29	3.65	6.05	7.65
+30	3.69	6.09	7.69
diff --git a/gtfold-mfe/data/RNAParams/miscloop.DAT b/gtfold-mfe/data/RNAParams/miscloop.DAT
new file mode 100644
index 0000000..3c000a5
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/miscloop.DAT
@@ -0,0 +1,12 @@
+1.079
+3.00
+.50	.50	.50	.50
+3.40	.00	.40
+10.10	-0.30	-0.30
+0.50
+0.0
+0.30
+1.60
+1.40
+4.10
+0
diff --git a/gtfold-mfe/data/RNAParams/sint2.DAT b/gtfold-mfe/data/RNAParams/sint2.DAT
new file mode 100644
index 0000000..96eabfd
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/sint2.DAT
@@ -0,0 +1,24 @@
+1.70	1.70	1.70	1.70	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70
+1.70	1.70	1.70	1.70	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70
+1.70	1.70	-0.40	1.70	1.10	1.10	-1.00	1.10	1.10	1.10	-1.00	1.10	1.70	1.70	-0.40	1.70	1.70	1.70	-0.40	1.70	1.70	1.70	-0.40	1.70
+1.70	1.70	1.70	1.50	1.10	1.10	1.10	1.00	1.10	1.10	1.10	1.10	1.70	1.70	1.70	1.20	1.70	1.70	1.70	1.70	1.70	1.70	1.70	1.70
+1.10	1.10	1.10	1.10	0.40	-0.40	0.40	0.40	1.10	0.40	0.40	0.40	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10
+1.10	1.10	1.10	1.10	0.30	0.50	0.40	0.50	0.40	0.40	0.40	0.40	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10
+1.10	1.10	-1.00	1.10	-0.10	0.40	-1.70	0.40	0.40	0.40	-1.40	0.40	1.10	1.10	-1.00	1.10	1.10	1.10	-1.00	1.10	1.10	1.10	-1.00	1.10
+1.10	1.10	1.10	1.10	0.40	0.00	0.40	-0.30	0.40	0.40	0.40	0.40	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10
+1.10	1.10	1.10	1.10	0.80	0.40	0.40	0.40	0.40	0.30	-0.10	0.40	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10	1.10
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diff --git a/gtfold-mfe/data/RNAParams/sint4.DAT b/gtfold-mfe/data/RNAParams/sint4.DAT
new file mode 100644
index 0000000..c878345
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/sint4.DAT
@@ -0,0 +1,576 @@
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+2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00	2.00
+3.40	2.50	2.50	2.00	2.60	2.50	2.00	2.50	2.50	2.00	2.70	1.30	2.00	2.50	2.30	1.70
+1.00	-0.30	0.50	2.00	-0.20	0.70	2.00	0.70	0.50	2.00	0.30	-2.50	2.00	0.70	-1.50	0.70
+2.90	1.70	2.50	2.00	1.80	1.60	2.00	1.60	2.50	2.00	2.20	1.30	2.00	1.60	2.30	0.80
diff --git a/gtfold-mfe/data/RNAParams/stack.DAT b/gtfold-mfe/data/RNAParams/stack.DAT
new file mode 100644
index 0000000..04a6889
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/stack.DAT
@@ -0,0 +1,16 @@
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.90
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.20	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.10	inf	-0.60
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.10	inf	-1.40	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.10	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-3.30	inf 	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.40	inf	-1.40	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.10	inf	-2.10	inf 	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.40	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.30
+inf 	inf 	inf 	inf 	inf 	inf	-3.40	inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.50	inf
+inf 	inf 	inf 	inf 	inf	-3.30	inf	-1.50	inf 	inf 	inf 	inf 	inf	-2.10	inf	-0.50
+inf 	inf 	inf 	inf	-2.20	inf	-2.50	inf 	inf 	inf 	inf 	inf	-1.40	inf	1.30	inf
+inf 	inf 	inf	-1.30	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.00	inf 	inf 	inf 	inf
+inf 	inf	-2.40	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.50	inf 	inf 	inf 	inf 	inf
+inf	-2.10	inf	-1.00	inf 	inf 	inf 	inf 	inf	-1.40	inf	0.30	inf 	inf 	inf 	inf
+-0.90	inf	-1.30	inf 	inf 	inf 	inf 	inf	-0.60	inf	-0.50	inf 	inf 	inf 	inf 	inf
diff --git a/gtfold-mfe/data/RNAParams/tloop.DAT b/gtfold-mfe/data/RNAParams/tloop.DAT
new file mode 100644
index 0000000..dda2750
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/tloop.DAT
@@ -0,0 +1,30 @@
+GGGGAC	-3.00
+GGUGAC	-3.00
+CGAAAG	-3.00
+GGAGAC	-3.00
+CGCAAG	-3.00
+GGAAAC	-3.00
+CGGAAG	-3.00
+CUUCGG	-3.00
+CGUGAG	-3.00
+CGAAGG	-2.50
+CUACGG	-2.50
+GGCAAC	-2.50
+CGCGAG	-2.50
+UGAGAG	-2.50
+CGAGAG	-2.00
+AGAAAU	-2.00
+CGUAAG	-2.00
+CUAACG	-2.00
+UGAAAG	-2.00
+GGAAGC	-1.50
+GGGAAC	-1.50
+UGAAAA	-1.50
+AGCAAU	-1.50
+AGUAAU	-1.50
+CGGGAG	-1.50
+AGUGAU	-1.50
+GGCGAC	-1.50
+GGGAGC	-1.50
+GUGAAC	-1.50
+UGGAAA	-1.50
diff --git a/gtfold-mfe/data/RNAParams/tstacke.DAT b/gtfold-mfe/data/RNAParams/tstacke.DAT
new file mode 100644
index 0000000..342f641
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/tstacke.DAT
@@ -0,0 +1,16 @@
+inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	-0.80	-1.00	-0.80	inf
+inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	-0.60	-0.70	inf	-0.70
+inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	-0.80	inf	-0.80	inf
+inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	inf	-0.80	inf	-0.80
+inf	inf	inf	inf	inf	inf	inf	inf	-1.50	-1.50	-1.40	inf	inf	inf	inf	inf
+inf	inf	inf	inf	inf	inf	inf	inf	-1.00	-1.10	inf	-0.80	inf	inf	inf	inf
+inf	inf	inf	inf	inf	inf	inf	inf	-1.40	inf	-1.60	inf	inf	inf	inf	inf
+inf	inf	inf	inf	inf	inf	inf	inf	inf	-1.40	inf	-1.20	inf	inf	inf	inf
+inf	inf	inf	inf	-1.10	-1.50	-1.30	inf	inf	inf	inf	inf	-0.30	-1.00	-0.80	inf
+inf	inf	inf	inf	-1.10	-0.70	inf	-0.50	inf	inf	inf	inf	-0.60	-0.70	inf	-0.70
+inf	inf	inf	inf	-1.60	inf	-1.40	inf	inf	inf	inf	inf	-0.60	inf	-0.80	inf
+inf	inf	inf	inf	inf	-1.00	inf	-0.70	inf	inf	inf	inf	inf	-0.80	inf	-0.80
+-1.00	-0.80	-1.10	inf	inf	inf	inf	inf	-1.00	-0.80	-1.10	inf	inf	inf	inf	inf
+-0.70	-0.60	inf	-0.50	inf	inf	inf	inf	-0.70	-0.60	inf	-0.50	inf	inf	inf	inf
+-1.10	inf	-1.20	inf	inf	inf	inf	inf	-0.50	inf	-0.80	-0.80	inf	inf	inf	inf
+inf	-0.60	inf	-0.50	inf	inf	inf	inf	inf	-0.60	-1.10	-0.50	inf	inf	inf	inf
diff --git a/gtfold-mfe/data/RNAParams/tstackh.DAT b/gtfold-mfe/data/RNAParams/tstackh.DAT
new file mode 100644
index 0000000..7648650
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/tstackh.DAT
@@ -0,0 +1,16 @@
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.30	-0.50	-0.30	-0.30
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.10	-0.20	-1.50	-0.20
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.10	-1.20	-0.20	0.20
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.30	-0.30	-0.60	-1.10
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.50	-1.50	-1.40	-1.80	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.00	-0.90	-2.90	-0.80	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-2.20	-2.00	-1.60	-1.10	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.70	-1.40	-1.80	-2.00	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf	-1.10	-1.50	-1.30	-2.10	inf 	inf 	inf 	inf	0.20	-0.50	-0.30	-0.30
+inf 	inf 	inf 	inf	-1.10	-0.70	-2.40	-0.50	inf 	inf 	inf 	inf	-0.10	-0.20	-1.50	-0.20
+inf 	inf 	inf 	inf	-2.40	-2.90	-1.40	-1.20	inf 	inf 	inf 	inf	-0.90	-1.10	-0.30	0.00
+inf 	inf 	inf 	inf	-1.90	-1.00	-2.20	-1.50	inf 	inf 	inf 	inf	-0.30	-0.30	-0.40	-1.10
+-0.50	-0.30	-0.60	-0.50	inf 	inf 	inf 	inf	-0.50	-0.30	-0.60	-0.50	inf 	inf 	inf 	inf
+-0.20	-0.10	-1.20	-0.00	inf 	inf 	inf 	inf	-0.20	-0.10	-1.70	0.00	inf 	inf 	inf 	inf
+-1.40	-1.20	-0.70	-0.20	inf 	inf 	inf 	inf	-0.80	-1.20	-0.30	-0.70	inf 	inf 	inf 	inf
+-0.30	-0.10	-0.50	-0.80	inf 	inf 	inf 	inf	-0.60	-0.10	-0.60	-0.80	inf 	inf 	inf 	inf
diff --git a/gtfold-mfe/data/RNAParams/tstacki.DAT b/gtfold-mfe/data/RNAParams/tstacki.DAT
new file mode 100644
index 0000000..dd7b5da
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/tstacki.DAT
@@ -0,0 +1,16 @@
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	0.70	0.70	-0.40	0.70
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	0.70	0.70	0.70	0.70
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.40	0.70	0.70	0.70
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	0.70	0.70	0.70	0.00
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.00	-0.00	-1.10	-0.00	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.00	-0.00	-0.00	-0.00	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-1.10	-0.00	-0.00	-0.00	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf 	inf 	inf 	inf 	inf	-0.00	-0.00	-0.00	-0.70	inf 	inf 	inf 	inf
+inf 	inf 	inf 	inf	-0.00	-0.00	-1.10	-0.00	inf 	inf 	inf 	inf	0.70	0.70	-0.40	0.70
+inf 	inf 	inf 	inf	-0.00	-0.00	-0.00	-0.00	inf 	inf 	inf 	inf	0.70	0.70	0.70	0.70
+inf 	inf 	inf 	inf	-1.10	-0.00	-0.00	-0.00	inf 	inf 	inf 	inf	-0.40	0.70	0.70	0.70
+inf 	inf 	inf 	inf	-0.00	-0.00	-0.00	-0.70	inf 	inf 	inf 	inf	0.70	0.70	0.70	0.00
+0.70	0.70	-0.40	0.70	inf 	inf 	inf 	inf	0.70	0.70	-0.40	0.70	inf 	inf 	inf 	inf
+0.70	0.70	0.70	0.70	inf 	inf 	inf 	inf	0.70	0.70	0.70	0.70	inf 	inf 	inf 	inf
+-0.40	0.70	0.70	0.70	inf 	inf 	inf 	inf	-0.40	0.70	0.70	0.70	inf 	inf 	inf 	inf
+0.70	0.70	0.70	0.00	inf 	inf 	inf 	inf	0.70	0.70	0.70	0.00	inf 	inf 	inf 	inf
diff --git a/gtfold-mfe/data/RNAParams/tstackm.DAT b/gtfold-mfe/data/RNAParams/tstackm.DAT
new file mode 100644
index 0000000..b850f80
--- /dev/null
+++ b/gtfold-mfe/data/RNAParams/tstackm.DAT
@@ -0,0 +1,16 @@
+inf 	inf 	inf	-1.00	inf 	inf 	inf	-1.00	inf 	inf 	inf	-2.20	-0.80	-1.00	-0.80	-0.90
+inf 	inf	-1.50	inf 	inf 	inf	-1.50	inf 	inf 	inf	-2.70	inf	-0.60	-0.70	-2.20	-0.70
+inf	-1.50	inf	-1.00	inf	-1.50	inf	-1.00	inf	-2.70	inf	-2.20	-0.80	-2.10	-0.80	-0.80
+-1.00	inf	-1.50	inf	-1.00	inf	-1.50	inf	-2.20	inf	-2.70	inf	-1.10	-0.80	-1.10	-0.80
+inf 	inf 	inf	-1.00	inf 	inf 	inf	-1.00	-1.70	-1.70	-1.70	-1.70	inf 	inf 	inf	-1.00
+inf 	inf	-1.50	inf 	inf 	inf	-1.50	inf	-1.00	-1.10	-3.30	-0.80	inf 	inf	-1.50	inf
+inf	-1.50	inf	-1.00	inf	-1.50	inf	-1.00	-1.70	-2.40	-1.70	-1.70	inf	-1.50	inf	-1.00
+-1.00	inf	-1.50	inf	-1.00	inf	-1.50	inf	-1.60	-1.40	-1.60	-1.20	-1.00	inf	-1.50	inf
+inf 	inf 	inf	-2.20	-1.10	-1.50	-1.30	-1.90	inf 	inf 	inf	-1.00	-0.80	-1.00	-0.80	-1.30
+inf 	inf	-2.70	inf	-1.10	-0.70	-3.40	-0.50	inf 	inf	-1.50	inf	-0.60	-0.70	-2.50	-0.70
+inf	-2.70	inf	-2.20	-1.60	-3.30	-1.40	-1.30	inf	-1.50	inf	-1.00	-0.80	-2.10	-0.80	-0.80
+-2.20	inf	-2.70	inf	-1.70	-1.00	-2.00	-0.70	-1.00	inf	-1.50	inf	-1.40	-0.80	1.30	-0.80
+-1.00	-0.80	-1.10	-1.30	inf 	inf 	inf	-1.00	-1.00	-0.80	-1.10	-1.00	inf 	inf 	inf	-2.00
+-0.70	-0.60	-2.40	-0.50	inf 	inf	-1.50	inf	-0.70	-0.60	-1.50	-0.50	inf 	inf	-2.50	inf
+-1.10	-2.10	-1.20	-1.00	inf	-1.50	inf	-1.00	-0.70	-1.40	-0.80	0.30	inf	-2.50	inf	-2.00
+-0.90	-0.60	-1.40	-0.50	-1.00	inf	-1.50	inf	-0.50	-0.60	-0.50	-0.50	-2.00	inf	-2.50	inf

From 2e9862ac86e70b59b62ce1e0d8fcaab57b7238c1 Mon Sep 17 00:00:00 2001
From: Prashant Gaurav <pgaurav3@gatech.edu>
Date: Mon, 27 Jun 2011 17:27:38 -0400
Subject: [PATCH 3/3] changes for --rnafold option

---
 gtfold-mfe/include/loader.h  |  2 +-
 gtfold-mfe/include/options.h |  1 +
 gtfold-mfe/src/loader.cc     | 10 ++++++++--
 gtfold-mfe/src/main.cc       |  5 +++--
 gtfold-mfe/src/options.cc    |  3 +++
 5 files changed, 16 insertions(+), 5 deletions(-)

diff --git a/gtfold-mfe/include/loader.h b/gtfold-mfe/include/loader.h
index 41d7c6b..1bac05c 100644
--- a/gtfold-mfe/include/loader.h
+++ b/gtfold-mfe/include/loader.h
@@ -25,7 +25,7 @@
 #include "constants.h"
 #include "data.h"
 
-void readThermodynamicParameters(const char *userdatadir,bool userdatalogic, int unamode,int t_mismatch);
+void readThermodynamicParameters(const char *userdatadir,bool userdatalogic, int unamode, int rnamode, int t_mismatch);
 
 int initStackValues(const std::string& fileName, const std::string& dirPath);
 int initMiscloopValues(const std::string& fileName, const std::string& dirPath);
diff --git a/gtfold-mfe/include/options.h b/gtfold-mfe/include/options.h
index 4d4dbf1..7c0cdbc 100644
--- a/gtfold-mfe/include/options.h
+++ b/gtfold-mfe/include/options.h
@@ -21,6 +21,7 @@ extern bool SHAPE_ENABLED;
 extern bool PARAM_DIR;
 extern bool T_MISMATCH;
 extern bool UNAMODE;
+extern bool RNAMODE;
 
 extern string seqfile;
 extern string constraintsFile;
diff --git a/gtfold-mfe/src/loader.cc b/gtfold-mfe/src/loader.cc
index 9144c07..0ab17e3 100644
--- a/gtfold-mfe/src/loader.cc
+++ b/gtfold-mfe/src/loader.cc
@@ -80,14 +80,20 @@ int init;
 int gail; /* It is either 0 or 1. It is used for grosely asymmetric internal loops */
 float prelog;
 
-void readThermodynamicParameters(const char *userdatadir,bool userdatalogic, int unamode = 0, int mismatch = 0) {
+void readThermodynamicParameters(const char *userdatadir,bool userdatalogic, 
+				int unamode = 0, int rnamode = 0, int mismatch = 0) {
 	
 	if (!userdatalogic && unamode) {
 		EN_DATADIR.assign(xstr(DATADIR));
 		EN_DATADIR += "/";
 		EN_DATADIR += "UNAParams";
+		printf("readThermodynamicParameters() %d %s\n",unamode, EN_DATADIR.c_str());
+	}else if (!userdatalogic && rnamode) {
+		EN_DATADIR.assign(xstr(DATADIR));
+		EN_DATADIR += "/";
+		EN_DATADIR += "RNAParams";
 	}
-    else if (!userdatalogic) {
+    	else if (!userdatalogic) {
 		EN_DATADIR.assign(xstr(DATADIR));
 		EN_DATADIR += "/";
 		EN_DATADIR += "Turner99";
diff --git a/gtfold-mfe/src/main.cc b/gtfold-mfe/src/main.cc
index 52172cd..5a7f707 100644
--- a/gtfold-mfe/src/main.cc
+++ b/gtfold-mfe/src/main.cc
@@ -226,10 +226,11 @@ int main(int argc, char** argv) {
 		exit(-1);
 	}
 	
+	printRunConfiguration(seq);
+	
 	// Read in thermodynamic parameters. Always use Turner99 data (for now)
-	readThermodynamicParameters(paramDir.c_str(), PARAM_DIR, UNAMODE, T_MISMATCH);
+	readThermodynamicParameters(paramDir.c_str(), PARAM_DIR, UNAMODE, RNAMODE, T_MISMATCH);
 
-	printRunConfiguration(seq);
 	
 	init_fold(seq);
 
diff --git a/gtfold-mfe/src/options.cc b/gtfold-mfe/src/options.cc
index 6dad154..77dabb8 100644
--- a/gtfold-mfe/src/options.cc
+++ b/gtfold-mfe/src/options.cc
@@ -16,6 +16,7 @@ bool VERBOSE = false;
 bool SHAPE_ENABLED = false;
 bool T_MISMATCH = false;
 bool UNAMODE = false;
+bool RNAMODE = false;
 bool b_prefilter = false;
 
 string seqfile = "";
@@ -127,6 +128,8 @@ void parse_options(int argc, char** argv) {
 				T_MISMATCH = true;
 			} else if (strcmp(argv[i], "--unamode") == 0) {
 				UNAMODE = true;
+			} else if (strcmp(argv[i], "--rnafold") == 0) {
+				RNAMODE = true;
 			} else if (strcmp(argv[i], "--prefilter") == 0) {
 				if(i < argc) {
 					int value1 = -1, value2 = -1;