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gemBS

May 5, 2020

8f82aee · May 5, 2020

This branch is 15 commits ahead of, 14 commits behind heathsc/gemBS:master.

Name		Name	Last commit message	Last commit date
parent directory ..
etc		etc	Add hooks for bigWig strand specific mode	Jan 20, 2020
__init__.py		__init__.py	merge-upstream	May 5, 2020
bsCallReports.py		bsCallReports.py	Remove GOF filter. Add autodetection of bs_call output format	Dec 15, 2019
bsCallSphinxReports.py		bsCallSphinxReports.py	Remove GOF filter. Add autodetection of bs_call output format	Dec 15, 2019
bsCallStats.py		bsCallStats.py	Remove GOF filter. Add autodetection of bs_call output format	Dec 15, 2019
commands.py		commands.py	Switch to use new snpxtr utility	Jan 26, 2020
database.py		database.py	Force bs_call to process contig pools in decreasing size order	Feb 12, 2020
parser.py		parser.py	Add hooks for bigWig strand specific mode	Jan 20, 2020
production.py		production.py	Switch back to using multiple threads for CRAM generation in benchmar…	Mar 18, 2020
report.py		report.py	Get map report creation working with new system	Jun 13, 2018
reportStats.py		reportStats.py	Several small bug fixes stabilty changes (see README.md for details)	Mar 8, 2019
sphinx.py		sphinx.py	Get map report creation working with new system	Jun 13, 2018
utils.py		utils.py	Move to new bs_call version	Dec 9, 2019
version.py		version.py	Bump version to 3.5.1	Mar 21, 2020