.gitlab-ci.yml

variables:
  AWS_DEFAULT_REGION: "us-east-1"
  DSS_SECRETS_STORE: "dcp/dss"
  DSS_TEST_STAGE: "dev"
  BOTO_CONFIG: "/dev/null"

stages:
    - test

.linux-test-base:
  stage: test
  image: ubuntu:18.04
  before_script:
    - IFS='.'; semver=($PYTHON_VERSION); PYTHON_MAJOR=${semver[0]}; unset IFS
    - export DEBIAN_FRONTEND=noninteractive
    - apt-get update --quiet
    - apt-get install --assume-yes --no-install-recommends software-properties-common
    - add-apt-repository --yes ppa:deadsnakes/ppa
    - apt-get update --quiet
    - apt-get install --assume-yes --no-install-recommends curl jq make python${PYTHON_MAJOR/2/}-pip python${PYTHON_VERSION}-dev
    - python${PYTHON_VERSION} -m pip install --upgrade pip==10.0.1
    - python${PYTHON_VERSION} -m pip install virtualenv==16.0.0
    - rm -f /usr/bin/python; ln -s /usr/bin/python${PYTHON_VERSION} /usr/bin/python
    - rm -f /usr/bin/pip; ln -s /usr/bin/pip${PYTHON_MAJOR} /usr/bin/pip
    - virtualenv ~/venv
    - source ~/venv/bin/activate
    - pip install -r requirements-dev.txt
    - scripts/fetch_secret.sh gcp-credentials.json > gcp-credentials.json
    - export GOOGLE_APPLICATION_CREDENTIALS=$(pwd -P)/gcp-credentials.json
    - sed -i -e s/dss.data.humancellatlas.org/dss.$DSS_TEST_STAGE.data.humancellatlas.org/ hca/default_config.json
  script:
    - make test
  except:
    - tags

.windows-test-base:
  stage: test
  before_script:
    # currently 3.6.8 is offered by the windows-runner
    - python --version
    - $env:WINDOWS_PYTHON = python -c 'import sys  ; print(sys.version[0:3])'
    - if (-NOT $env:WINDOWS_PYTHON -eq ${PYTHON_VERSION}) { echo "python missmatch"; exit(1) }
    - virtualenv venv3
    - venv3\Scripts\activate
    - pip install -r requirements-dev.txt
    - python .\scripts\fetch_secret.py --secret-name gcp-credentials.json --write
    - $env:GOOGLE_APPLICATION_CREDENTIALS = (Convert-Path .\gcp-credentials.json)
    - (Get-Content .\hca\default_config.json).replace('dss.data.humancellatlas.org',"dss.${DSS_TEST_STAGE}.data.humancellatlas.org")| Set-Content  .\hca\default_config.json
  script:
    - make test-win

test-3.5:
  extends: .linux-test-base
  variables:
    PYTHON_VERSION: "3.5"

test-3.6:
  extends: .linux-test-base
  variables:
    PYTHON_VERSION: "3.6"

test-3.6-win:
  extends: .windows-test-base
  variables:
    PYTHON_VERSIO: "3.6"
  tags:
    - windows

test-3.7:
  extends: .linux-test-base
  variables:
    PYTHON_VERSION: "3.7"