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miRNA_details.php
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<!DOCTYPE html >
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
<link href="main2.css" rel="stylesheet" type="text/css" />
<title>miRNASNP:Detail information</title>
<script type="text/javascript">
function inini(content)
{var a="<img src='";
var c="'><input type='button' value='close' onclick='loadBox.hide()'/>";
var d=a.concat(content);
var e=d.concat(c);
loadBox.init();
loadBox.boxContent=e;
}
</script>
<script type="text/javascript">
window.onload=window.onresize=function(){
if(document.getElementById("left").clientHeight<document.getElementById("content").clientHeight){
document.getElementById("left").style.height=document.getElementById("content").offsetHeight+"px";fsetHeight+"px";
}
else{
document.getElementById("content").style.height=document.getElementById("left").offsetHeight+"px";fsetHeight+"px";
}
}
//<![CDATA[
//弹出层 by ChenLiang v1.0
function LightBox(boxWidth,boxHeight,boxContent)
{
this.boxWidth=boxWidth;
this.boxHeight=boxHeight;
this.boxContent=boxContent;
var bgLayer,boxLayer;
var documentHtml=document.documentElement;
var documentHtml1=document.body;
this.createBgLayer=function()
{
bgLayer = document.createElement("div");
with (bgLayer)
{
className="bgLayer";
style.width=documentHtml.scrollWidth+"px";
style.height=documentHtml.scrollHeight+"px";
style.display="none";
}
document.body.insertBefore(bgLayer,document.body.firstChild);
};
this.createBox=function(){
boxLayer = document.createElement("div");
with (boxLayer)
{
className = "boxLayer";
style.width=this.boxWidth + "px";
style.height = this.boxHeight +"px";
style.display="none";
};
document.body.insertBefore(boxLayer,document.body.firstChild);
};
this.init= function()
{
this.createBgLayer();
this.createBox();
}
// if IE 6.0
function hideShowSelect(obj)
{
if ( window.navigator.userAgent.indexOf("MSIE 6.0") > 0)
{
var selectDom = document.getElementsByTagName("select");
for (var i = 0; i < selectDom.length ; i++)
{
if (obj)
sele ctDom[i].style.display="none";
else
selectDom[i].style.display="";
}
}
};
this.show = function()
{
hideShowSelect(true);
boxLayer.innerHTML=this.boxContent;
bgLayer.style.display = "block";
boxLayer.style.display = "block";
boxLayer.style.left = documentHtml.offsetWidth /2 - boxLayer.offsetWidth/2 +"px";
boxLayer.style.top = documentHtml.scrollTop + documentHtml.offsetHeight/2 - this.boxHeight/2 -30 + "px";
}
this.hide = function()
{
hideShowSelect(false);
bgLayer.style.display = "none";
boxLayer.style.display = "none";
}
}
//]]>
</script>
<script type="text/javascript">
//调用方法
var loadBox= new LightBox(500,500);
</script>
<style type="text/css">
.bgLayer{ background:#000; opacity:0.5; filter:alpha(opacity=50);z-index:10001;position:absolute;left:0;top:0;}
.boxLayer{ background:#fff; border:4px solid #ccc; overflow:hidden; zoom:1; z-index:10002; position:absolute;padding:8px;}
.boxLayer p{padding:5px 0;text-align:center;}
.alldenglu{
width:260px;}
.denglu {
font-size: 14px;
margin-bottom:6px;
color: #999999;
}
</style>
<style type="text/css">
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font-size:20px;
font-weight:bold;
color:#3E1400;
background-color:#D9D9D9;
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.menu1 {
font-family: "宋体";
font-size: 14px;
font-weight: bold;
color: #FFFFFF;
text-decoration: none;
background-color: #990000;
cursor:hand;
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font-family: "宋体";
font-size: 14px;
font-weight: bold;
color: #990000;
text-decoration: none;
background-color: #FFFFFF;
cursor:hand;
}
.left1{font-family:Arial, Helvetica, sans-serif;
font-size:15px;
font-weight:bold;
color:#3E1400;
background-color:#D9D9D9;
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font-size:15px;
font-weight:bold;
color:#3E1400;
background-color:#E8E8E8;
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font-size:12px;
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background-color:#FFE3D9;
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color:#000000;
background-color:#F6F6F6;
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.sidebar1 ul { list-style:none; padding:0; margin:0; text-align:center }
.sidebar1 li { float:left; height:24px; margin:0; padding:0 3px; background:#fff; }
.sidebar1 a { color:#000;font-size:12px;}
.sidebar1 a:hover { color:#f60; }
.sidebar1 .active a { color:#f00; font-size:24px; font-family:Arial, Helvetica, sans-serif}
.sidebar1 .unactive a { color:#000033; font-size:24px; font-family:Arial, Helvetica, sans-serif}
.endContent { margin-top:6px; height:230px; font-size:12px; line-height:180%;}
.endContent a { float:left; height:24px; }
-->
</style>
<script type="text/javascript">
var D=new Function('obj','return document.getElementById(obj)');
function showDiv(sobj,num,total)
{ var tri="trianglefold"+num;
var triu="triangleunfold"+num;
D(tri).style.display="none";
D(triu).style.display="block";
for(var id = 1;id<=total;id++)
{ try{ var ss = sobj + id;
var nss = sobj + "nav" + id;
var tri="trianglefold"+id;
var triu="triangleunfold"+id;
if(id==num)
{ D(ss).style.display="block";
D(nss).className="active";
}
else
{ D(ss).style.display="none";
D(nss).className="unactive";
D(tri).style.display="block";
D(triu).style.display="none";
}
}
catch(e)
{
}
}
}
function changefold(pp)
{var id1="mirnafold";
var id2="mirnaunfold";
if(pp==1)
{D(id1).style.display="none";
D(id2).style.display="block";
}
else
{D(id1).style.display="block";
D(id2).style.display="none";
}
}
function changefold2(pp)
{var id1="mirnafold2";
var id2="mirnaunfold2";
if(pp==1)
{D(id1).style.display="none";
D(id2).style.display="block";
}
else
{D(id1).style.display="block";
D(id2).style.display="none";
}
}
var sobj1;
var num1;
var total1;
function hidDivact(s,nMin)
{ var obj=document.getElementById(s);
var h = parseInt(obj.offsetHeight);
if (h > nMin){
obj.style.height = (h - 20)+"px";
clearTimeout(act);
act = setTimeout("hidDivact('"+s+"',"+nMin+")", 10);
counttime++;
}
else
{ try{var ss=sobj1+num1;
var nss=sobj1+"nav"+num1;
var tri="trianglefold"+num1;
var triu="triangleunfold"+num1;
D(ss).style.display="none";
D(nss).className="unactive";
D(tri).style.display="block";
D(triu).style.display="none";
}
catch(e)
{
}
}
}
function hidDiv(sobj,num,total)
{sobj1=sobj;
num1=num;
total1=total;
hidDivact('snpcontent',0);
}
</script>
<script language="JavaScript">
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var act;
function over1(s,nMax){
var obj=document.getElementById(s);
var h = parseInt(obj.offsetHeight);
var k1=document.getElementById('pre').scrollHeight;
nMax=0+k1;
var k2=document.getElementById('mat').scrollHeight;
nMax=nMax+k2+120;
var k3=document.getElementById('tar').scrollHeight;
nMax=nMax+k3+100;
if (h < nMax){
obj.style.height = (h + 20)+"px";
clearTimeout(act);
act = setTimeout("over('"+s+"',"+nMax+")", 10);
}
}
function over(s,nMax){
var obj=document.getElementById(s);
var h = parseInt(obj.offsetHeight);
if (h < nMax){
obj.style.height = (h + 20)+"px";
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act = setTimeout("over('"+s+"',"+nMax+")", 10);
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}
function out(s,nMin)
{
var obj=document.getElementById(s);
var h = parseInt(obj.offsetHeight);
if (h > nMin)
{
obj.style.height = (h - 20)+"px";
clearTimeout(act);
act = setTimeout("out('"+s+"',"+nMin+")", 10);
}
}
</script>
<?
include "connectinclude.php";
$ID=$_GET["id"];
$sqlcontrol4="select * from table4_miRNA_SNP where premir='".$ID."'";
$result4 = mysql_query($sqlcontrol4);
$i=1;
while($row4 = mysql_fetch_array($result4))
{$on_premir[$i]=$row4["on_premir"];
$snp_pos[$i]=$row4["snp_pos"];
$snp_chr[$i]=$row4["chr"];
$snp_id[$i]=$row4["snp_id"];
$snp_strand[$i]=$row4["snp_strand"];
$allele[$i]=$row4["ref_allele"];
$ref_allele[$i]=$row4["ref_allele"];
$sqlcontrol6="select * from table6_energy where snp ='".$row4["snp_id"]."'";
$result6=mysql_query($sqlcontrol6);
$row6=mysql_fetch_array($result6);
$preenergy[$i]=$row6["energy"];
$snp_energy[$i]=$row6["snp_energy"];
$changed_energy[$i]=$row6["changed_energy"];
$i++;
}
$total=$i-1;
$p=1;
?>
</head>
<body onLoad="tabit<? echo $total; ?>(tab1,ctab1)">
<div class="container">
<div class='header'>
<img src="image/logo2.jpg" usemap="#chomap2" border="0" title="welcome" />
<map name="chomap2" id="chomap2">
<area shape="rect" coords="22,0,305,130" href="index.php" alt="homepage" />
</map></div>
<div class="left">
<?
include "sidebarinclude.php";
?>
</div>
<div class="content" style="border:#000000 solid 4">
<?php
$sqlcontrol1="select * from table1_pre_miRNA where id='".$ID."'";
$sqlcontrol2="select * from table2_mature_miRNA where premiRNA_id='".$ID."'";
$sqlcontrol3="select * from table3_hairpin where Id='".$ID."'";
$sqlcontrol4="select * from table4_miRNA_SNP where premir='".$ID."'";
$sqlcontrol5="select * from table5_miRNA_target where id='".$ID."'";
$result1 = mysql_query($sqlcontrol1);
$result2 = mysql_query($sqlcontrol2);
$result3 = mysql_query($sqlcontrol3);
$result5 = mysql_query($sqlcontrol5);
$row1=mysql_fetch_array($result1);
$row2=mysql_fetch_array($result2);
$row3=mysql_fetch_array($result3);
$row5=mysql_fetch_array($result5);
$mytdadd=850;
if($row5["target"]!="")
$mytdadd=1000;
?>
<h2> <div style="font-family:Arial, Helvetica, sans-serif;color:#BD4700"> <b> Detail information of <? echo $row1["id"] ?> </b> </div> </h2>
<div id="mytd" style="height:50px;margin-top:30px;overflow:hidden" >
<div>
<div style="float:left">
<table>
<tr style="height:50px">
<td>
<div id="mirnafold" style="display:block;cursor:pointer">
<img src="image/triangle1.png" onClick="over1('mytd',<? echo $mytdadd;?>);changefold(1)">
</div>
<div id="mirnaunfold" style="display:none;cursor:pointer">
<img src="image/triangle2.png" onClick="out('mytd',50);changefold(2)">
</div>
</td>
</tr>
</table>
</div>
<div style="font-family:Arial, Helvetica, sans-serif;cursor:pointer;color:#0033FF;" >
<table>
<tr >
<td style="height:50px;background-color:#D9D9D9;width:780px">
<div style="font-size:30px;margin:10px" >
<a onClick="over1('mytd',<? echo $mytdadd;?>);changefold(1)">
microRNA Information
</a>
</div>
</td>
</tr>
</table>
</div>
</div>
<br/>
<table id="pre" style="margin-left:38px">
<tr>
<td colspan="2" class="tabletitle">
<div style="margin:5px">Pre-miRNA</div>
</td>
</tr>
<tr>
<td class="left1" width="130"> ID: </td> <td class="right1" width="650"> <? echo $row1["id"]; ?>
<a href="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=<? echo $row1["acc"] ?>" title="miRBase" target="_blank"><img src="image/mirnabase.JPG" border="0"/>
</a>
</td>
</tr>
<tr>
<td class="left2" width="130"> Accession: </td> <td class="right2" width="650"><? echo $row1["acc"]; ?> </td>
</tr>
<tr>
<td class="left1" width="130">Chr Position:</td>
<td class="right1" width="650"> <? echo $row1["chr"].":".$row1["start"]."-".$row1["end"]; ?> (GRCh37) <? echo "[".$row1["strand"]."]"; ?></td>
</tr>
<tr>
<td class="left2" width="130"> Host Gene: </td><td class="right2" width="650"><? if($row1["host"]=="Null")echo "intergenic";else echo $row1["host"];?></td>
</tr>
<tr>
<td class="left1" width="130">Cluster </td>
<td class="right1" width="650">
<b> 5kb: </b> <? if($row1["5kbcluster"]!="Null" ) echo $row1["5kbcluster"]; else echo "No microRNA in this cluster" ?> <br/>
<b> 10kb: </b><? if($row1["10kbcluster"]!="Null") echo $row1["10kbcluster"]; else echo "No microRNA in this cluster" ?><br/></td>
</tr>
<tr>
<td class="left2" width="130"> Conservation:</td><td class="right2" width="650"> <? if($row1["conservation"]=="Null")echo "Human Specific";else echo $row1["conservation"];?> </td>
</tr>
<tr>
<td class="left1" width="130">Orthology Species:</td><td class="right1" width="650"> <?
if($row1["species"]=="Null")
echo "Human Specific";
$array = explode(";", $row1["species"]);
$i=0;
$ppp=0;
?> <table><tr>
<?
while($array[$i]!="")
{
switch( substr($array[$i],0,3) )
{case "gga":
?><td><b>Chicken:</b> <?
echo $array[$i];$ppp++;?> </td><?
break;
case "ptr":
?><td><b>Chimpanzee:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "bta":
?><td><b>Cow:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "cfa":
?><td><b>Cog:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "eca":
?><td><b>Horse:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "mmu":
?><td><b>Mouse:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "rno":
?><td><b>Rattus:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "dre":
?><td><b>Zebrafish:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "mdo":
?><td><b>Monodelphis domestica:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "ssc":
?><td><b>Sus scrofa:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "tgu":
?><td><b>Taeniopygia guttata:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "tni":
?><td><b>Tetraodon nigroviridis:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "xtr":
?><td><b>Xenopus tropicalis:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "ppy":
?><td><b>Pongo pygmaeus:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "age":
?><td><b>Ateles geoffroyi:</b> <?
echo $array[$i]; $ppp++;?> </td><?
break;
case "ssy":
?><td><b>Symphalangus syndactylus:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "mml":
?><td><b>Macaca mulatta:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "pbi":
?><td><b>Pygathrix bieti:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "bta":
?><td><b>Bos taurus:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "oan":
?><td><b>Ornithorhynchus anatinus:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "xla":
?><td><b>Xenopus tropicalis:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "ggo":
?><td><b>Gorilla gorilla:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "sla":
?><td><b>Saguinus labiatus:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "ppa":
?><td><b>Pan paniscus:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "cin":
?><td><b>Ciona intestinalis:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "csa":
?><td><b>Ciona savignyi:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "aae":
?><td><b>A. aegypti:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "odi":
?><td><b>Oikopleura dioica:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "lla":
?><td><b>Lagothrix lagotricha:</b> <?
echo $array[$i];$ppp++; ?> ;</td><?
break;
case "mne":
?><td><b>Macaca nemestrina:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "ame":
?><td><b>A. mellifera:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "bfl":
?><td><b>B. floridae:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "sme":
?><td><b>S. mediterranea:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "cte":
?><td><b>C. teleta:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "api":
?><td><b>A. pisum:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "ath":
?><td><b>A. thaliana:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "cbr":
?><td><b>C. briggsae:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "cel":
?><td><b>C. elegans:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "cre":
?><td><b>C. reinhardtii:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "dps":
?><td><b>D. pseudoobscura:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "osa":
?><td><b>O. sativa:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "ptc":
?><td><b>P. trichocarpa:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "tae":
?><td><b>T. aestivum:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
case "vvi":
?><td><b>V. vinifera:</b> <?
echo $array[$i];$ppp++; ?> </td><?
break;
default:
}
$i++;
if($ppp==3)
{?></tr>
<tr>
<?
$ppp=0;
}
}
?></tr></table>
</td>
</tr>
<tr>
<td class="left2" width="130"> Sequence :</td><td class="right2" width="650">
<?
$i=0;$j=0;
while($row1["seq"][$i]!="")
{echo $row1["seq"][$i];
$i++;
$j++;
if($j==75)
{?><br/>
<?
$j=0;
}
}
?> </td>
</tr>
</table>
<br/>
<table id="mat" style="margin-left:38px">
<tr>