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Exit errror 137 #61

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marlenen1 opened this issue May 30, 2022 · 4 comments
Open

Exit errror 137 #61

marlenen1 opened this issue May 30, 2022 · 4 comments

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@marlenen1
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Hi

I tried to use aradeepopsis with conda, it already worked once on another computer with the same workflow I have.

Now I tried to use it on another computer but get the exit error 137.

What can I do?

@phue
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phue commented May 30, 2022

Hi @marlenen1,

this could be caused by memory pressure, when your computer runs out of available RAM. Also see this part of the README.
Could you elaborate on which step of the pipeline this happens exactly? There should be a file named .nextflow.log in the directory where you started the pipeline.

Cheers,
Patrick

@marlenen1
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Hi thank you
it might be the memory but I increased the swap memory but it still does not work
The first step works fine, but the second step when it trys to build the model is then not possible.

@phue
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phue commented May 31, 2022

How much RAM does your computer have? From my experience, you'd need atleast 6GB available memory to run the pipeline with default settings, and 12GB when using the --multiscale parameter.

@marlenen1
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My computer has 8GB of RAM so it should be enough to run it without --multiscale parameter

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