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TomOpt Authors

The TomOpt project, and its continued development and support, is the result of the combined work of many people, whose contributions are summarised below.

In order to start time, the TomOpt authors/contributors are: Giles Strong, Tommaso Dorigo, Andrea Giammanco, Pietro Vischia, Jan Kieseler, Maxime Lagrange, Federico Nardi, Haitham Zaraket, Max Lamparth, Federica Fanzago, Oleg Savchenko, Nitesh Sharma, Anna Bordignon, Mariam Safieldin, Aitor Orio, Pablo Martinez Ruiz del Arbol, Zahraa Daher.

Giles Chatham Strong (@GilesStrong)

2021 - present. MODE Collaboration, independent researcher.

Code contributions:

  • Basic elements for all aspects of TomOpt:
    • Inference, muon, optimisation, plotting, & volume modules + unit tests
    • Voxel and panel detectors
  • TomOpt repo establishment (boiler-plate files, CI/CD etc.)
  • Inference via GNNs (VoxelNet)
  • Conceptual planning, implementation, & investigation for:
    • ULorry benchmark
    • Bimodal test-statistic for classification with X0 predictions
    • Ladle furnace benchmark
  • Implementation of:
    • Geant 4 parameterised scattering model in TomOpt
    • PhiDet benchmark
    • Ladle furnace inference
  • Tutorial writing
  • Code reviews

Other roles:

  • Project management
  • Project conceptualisation
  • Meeting chairperson, presentations
  • Dedicated talks on TomOpt
  • Poster presentations
  • Paper writing

Tommaso Dorigo (@tdorigo)

2021 - present. INFN-Padova, Italy.

Code contributions:

  • Assistance and support during writing of basic aspects of TomOpt
  • Formula derivations for:
    • PDG scattering models
    • Muon track-fitting
    • PhiDet muon track-fitting
  • Investigation and development of Geant 4 parameterised scattering model
  • Conceptual planning for:
    • Maximum likelihood estimate for X0 inference
    • ULorry benchmark
    • Bimodal test-statistic for classification with X0 predictions
    • PhiDet detector benchmark
  • Paper writing

Other roles:

  • Project conceptualisation
  • Project management
  • Supervision (G. Strong, A Bordignon, F. Nardi, Oleg Savchenko)
  • Funding acquisition (G. Strong, A Bordignon, F. Nardi, Oleg Savchenko)
  • Meeting presentations
  • Advertisement/mention of TomOpt in talks

Andrea Giammanco (@giamman)

2021 - present. Université catholique de Louvain, Belgium.

Code contributions:

  • Assistance, advice, and information for various aspects of muon tomography
  • Paper writing

Other roles:

  • Funding acquisition (M. Lagrange, Z. Daher)
  • Supervision (M. Lagrange, Z. Daher, M. Safieldin)
  • Meeting attendance
  • Advertisement/mention of TomOpt in talks

Pietro Vischia (@vischia)

2021 - present. Université catholique de Louvain, Belgium.

Code contributions:

  • Passive and active volume 3D visualization
  • Conceptual planning, implementation, and investigation of maximum likelihood estimate for X0 inference
  • Conceptual planning for:
    • ULorry benchmark
    • Bimodal test-statistic for classification with X0 predictions
  • Tutorial feedback

Other roles:

  • Supervision (M. Lagrange?)
  • Meeting presentations
  • Advertisement/mention of TomOpt in talks

Jan Kieseler (@jkiesele)

2021 - present. CERN, Switzerland.

Code contributions:

  • Geant 4 data for parametrised scattering model
  • Advice and assistance on custom PyTorch and CUDA kernels

Other roles:

  • Advertisement/mention of TomOpt in talks

Maxime Lagrange (@MaximeLagrange)

2021 - present. Université catholique de Louvain, Belgium.

Code contributions:

  • Investigation of:
    • Detector scattering of muons
    • Momentum estimation
    • Angular statistics reconstruction method for volume inference
  • Assistance with muon coordinate-system
  • Assistance, advice, and information for various aspects of muon tomography
  • Tutoring (M. Safieldin, A. Orio)

Other roles:

  • Dedicated talks on TomOpt
  • Meeting chairperson, presentations
  • Conference proceedings writing
  • Paper writing

Federico Nardi (@FedericoNardi)

2021 - present. INFN-Padova, Italy.

Code contributions:

  • Improved muon-generation model

Other roles:

  • Meeting presentations

Haitham Zaraket (@hzaraket)

2021 - present. Lebanese University, Lebanon.

Code contributions:

  • Improved muon-generation model
  • Tutorial feedback

Other roles:

  • Meeting presentations
  • Paper writing

Max Lamparth (@maxlampe)

2021 - present. Technical University of Munich, Germany.

Code contributions:

  • Gaussian mixture-models for detector modelling (Heatmap Detectors)

Other roles:

  • Meeting presentations
  • Advertisement/mention of TomOpt in talks

Federica Fanzago (@fanzago)

2021 - 2021. INFN-Padova, Italy.

Code contributions:

Other roles:

  • Meeting attendance

Oleg Savchenko (@intfxdx)

2022 - 2023. INFN-Padova, Italy.

Code contributions:

Other roles:

  • Meeting attendance

Nitesh Sharma

2022 - 2022. India.

Code contributions:

  • Investigation and development of Geant 4 parameterised scattering model

Other roles:

  • Meeting attendance

Anna Bordignon (@Anna5997)

2022 - present. INFN-Padova, Italy.

Code contributions:

  • Conceptual planning, implementation, and investigation of maximum likelihood estimate for X0 inference
  • Formula derivations for PhiDet muon track-fitting

Other roles:

  • Meeting attendance
  • Meeting presentations
  • Dedicated talks on TomOpt

Mariam Safieldin (@mariamheikal)

2023.01-2023.04. American University of Beirut, Lebanon.

Code contributions:

  • Python/pytorch reimplementation of the expectation maximization algorithm, and further detailed study of its performance

Other roles:

  • Meeting attendance
  • Full report on EM algorithm

Aitor Orio Alonso (@Tortxu10)

2023 - present. Muon Tomography Systems, Spain.

Code contributions:

  • Conceptual planning, investigation, and implementation for Ladle furnace benchmark inference method and loss function.
  • Assistance, advice, and information for various aspects of muon tomography

Other roles:

  • Meeting presentations
  • Meeting attendance
  • Paper writing

Pablo Martinez Ruiz del Arbol

2023 - present. Instituto de Fisica de Cantabria & Muon Tomography Systems, Spain.

Code contributions:

  • Conceptual planning, and Geant 4 simulations for Ladle furnace benchmark.
  • Assistance, advice, and information for various aspects of muon tomography

Other roles:

  • Meeting presentations
  • Meeting attendance
  • Paper writing

Zahraa Daher (@zahraadaher)

2023 - present, Université catholique de Louvain, Belgium.

Code contributions:

  • Investigation into new muon scattering model

Other roles:

  • Meeting presentations

Name Surname (@Github_name)

start year - end year / present. Institute, Country.

Code contributions:

  • list

Other roles:

  • Other roles + CRediT roles

CRediT Roles reference

Complete list of the 14 roles, but authors should probably only note the following relevant roles:

  • Project conceptualisation
  • Funding acquisition
  • Project management
  • Supervision

Other roles that are likely covered already by code contributions:

  • Data curation
  • Formal Analysis
  • Investigation
  • Methodology
  • Validation
  • Visualisation
  • Software

Remaining roles that will vary by publication:

  • Resources (Hardware)
  • Writing – original draft
  • Writing – review & editing