checklists.yaml

id: http://w3id.org/mixs/checklists
name: checklists
imports:
- linkml:types
- terms
prefixes:
  linkml: https://w3id.org/linkml/
  mixs.vocab: https://w3id.org/mixs/vocab/
  MIXS: https://w3id.org/mixs/terms/
default_prefix: mixs.vocab
slots: {}
classes:
  MIGS eukaryote:
    mixin: true
    description: 'Minimal Information about a Genome Sequence: eukaryote'
    aliases:
    - MIGS.eu
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - subspecf_gen_lin
    - ploidy
    - num_replicons
    - extrachrom_elements
    - estimated_size
    - ref_biomaterial
    - source_mat_id
    - pathogenicity
    - biotic_relationship
    - specific_host
    - host_spec_range
    - host_disease_stat
    - trophic_level
    - propagation
    - isol_growth_condt
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - compl_score
    - compl_software
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        required: false
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      subspecf_gen_lin:
        recommended: true
      ploidy:
        required: false
      num_replicons:
        required: false
      extrachrom_elements:
        required: false
      estimated_size:
        required: false
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      pathogenicity:
        recommended: true
      biotic_relationship:
        required: false
      specific_host:
        required: false
      host_spec_range:
        required: false
      host_disease_stat:
        required: false
      trophic_level:
        recommended: true
      propagation:
        recommended: true
      isol_growth_condt:
        required: true
      samp_collec_device:
        required: false
      samp_collec_method:
        required: false
      samp_mat_process:
        required: false
      samp_size:
        required: false
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        required: false
      lib_reads_seqd:
        required: false
      lib_layout:
        required: false
      lib_vector:
        required: false
      lib_screen:
        required: false
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        recommended: true
      assembly_qual:
        required: true
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        recommended: true
      number_contig:
        required: true
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      compl_score:
        required: false
      compl_software:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIGS bacteria:
    mixin: true
    description: 'Minimal Information about a Genome Sequence: cultured bacteria/archaea'
    aliases:
    - MIGS.ba
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - subspecf_gen_lin
    - num_replicons
    - extrachrom_elements
    - estimated_size
    - ref_biomaterial
    - source_mat_id
    - pathogenicity
    - biotic_relationship
    - specific_host
    - host_spec_range
    - host_disease_stat
    - trophic_level
    - encoded_traits
    - rel_to_oxygen
    - isol_growth_condt
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - compl_score
    - compl_software
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        required: false
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      subspecf_gen_lin:
        recommended: true
      num_replicons:
        required: true
      extrachrom_elements:
        recommended: true
      estimated_size:
        required: false
      ref_biomaterial:
        required: true
      source_mat_id:
        recommended: true
      pathogenicity:
        recommended: true
      biotic_relationship:
        recommended: true
      specific_host:
        recommended: true
      host_spec_range:
        required: false
      host_disease_stat:
        recommended: true
      trophic_level:
        recommended: true
      encoded_traits:
        required: false
      rel_to_oxygen:
        recommended: true
      isol_growth_condt:
        required: true
      samp_collec_device:
        required: false
      samp_collec_method:
        required: false
      samp_mat_process:
        required: false
      samp_size:
        required: false
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        required: false
      lib_reads_seqd:
        required: false
      lib_layout:
        required: false
      lib_vector:
        required: false
      lib_screen:
        required: false
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        recommended: true
      assembly_qual:
        required: true
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        recommended: true
      number_contig:
        required: true
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      compl_score:
        required: false
      compl_software:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIGS plant:
    mixin: true
    description: 'Minimal Information about a Genome Sequence: plant'
    aliases:
    - MIGS.pl
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - subspecf_gen_lin
    - estimated_size
    - ref_biomaterial
    - source_mat_id
    - specific_host
    - host_spec_range
    - propagation
    - encoded_traits
    - isol_growth_condt
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - compl_score
    - compl_software
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        required: false
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      subspecf_gen_lin:
        recommended: true
      estimated_size:
        required: false
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      specific_host:
        recommended: true
      host_spec_range:
        required: false
      propagation:
        required: true
      encoded_traits:
        recommended: true
      isol_growth_condt:
        required: true
      samp_collec_device:
        required: false
      samp_collec_method:
        required: false
      samp_mat_process:
        required: false
      samp_size:
        required: false
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        required: false
      lib_reads_seqd:
        required: false
      lib_layout:
        required: false
      lib_vector:
        required: false
      lib_screen:
        required: false
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        recommended: true
      assembly_qual:
        required: false
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        recommended: true
      number_contig:
        required: false
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      compl_score:
        required: false
      compl_software:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIGS virus:
    mixin: true
    description: 'Minimal Information about a Genome Sequence: cultured bacteria/archaea'
    aliases:
    - MIGS.ba
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - subspecf_gen_lin
    - num_replicons
    - estimated_size
    - ref_biomaterial
    - source_mat_id
    - pathogenicity
    - biotic_relationship
    - specific_host
    - host_spec_range
    - host_disease_stat
    - propagation
    - encoded_traits
    - isol_growth_condt
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - samp_size
    - samp_vol_we_dna_ext
    - virus_enrich_appr
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - compl_score
    - compl_software
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        required: false
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      subspecf_gen_lin:
        recommended: true
      num_replicons:
        recommended: true
      estimated_size:
        required: false
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      pathogenicity:
        recommended: true
      biotic_relationship:
        required: false
      specific_host:
        recommended: true
      host_spec_range:
        recommended: true
      host_disease_stat:
        recommended: true
      propagation:
        required: true
      encoded_traits:
        recommended: true
      isol_growth_condt:
        required: true
      samp_collec_device:
        required: false
      samp_collec_method:
        required: false
      samp_mat_process:
        required: false
      samp_size:
        required: false
      samp_vol_we_dna_ext:
        required: false
      virus_enrich_appr:
        recommended: true
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        required: false
      lib_reads_seqd:
        required: false
      lib_layout:
        required: false
      lib_vector:
        required: false
      lib_screen:
        required: false
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        recommended: true
      assembly_qual:
        required: false
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        recommended: true
      number_contig:
        required: false
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      compl_score:
        required: false
      compl_software:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIGS org:
    mixin: true
    description: 'Minimal Information about a Genome Sequence: org'
    aliases:
    - MIGS.org
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - subspecf_gen_lin
    - extrachrom_elements
    - estimated_size
    - ref_biomaterial
    - source_mat_id
    - isol_growth_condt
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - compl_score
    - compl_software
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        required: false
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      subspecf_gen_lin:
        recommended: true
      extrachrom_elements:
        recommended: true
      estimated_size:
        required: false
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      isol_growth_condt:
        required: true
      samp_collec_device:
        required: false
      samp_collec_method:
        required: false
      samp_mat_process:
        required: false
      samp_size:
        required: false
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        required: false
      lib_reads_seqd:
        required: false
      lib_layout:
        required: false
      lib_vector:
        required: false
      lib_screen:
        required: false
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        recommended: true
      assembly_qual:
        required: false
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        recommended: true
      number_contig:
        required: false
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      compl_score:
        required: false
      compl_software:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIMS:
    mixin: true
    description: Metagenome or Environmental
    aliases:
    - MIMS
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - ref_biomaterial
    - source_mat_id
    - rel_to_oxygen
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - size_frac
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - mid
    - adapters
    - seq_meth
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        recommended: true
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      rel_to_oxygen:
        required: false
      samp_collec_device:
        recommended: true
      samp_collec_method:
        recommended: true
      samp_mat_process:
        recommended: true
      size_frac:
        required: false
      samp_size:
        recommended: true
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        recommended: true
      lib_reads_seqd:
        recommended: true
      lib_layout:
        recommended: true
      lib_vector:
        recommended: true
      lib_screen:
        recommended: true
      mid:
        recommended: true
      adapters:
        recommended: true
      seq_meth:
        required: true
      assembly_qual:
        recommended: true
      assembly_name:
        recommended: true
      assembly_software:
        recommended: true
      annot:
        recommended: true
      number_contig:
        recommended: true
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIMARKS specimen:
    mixin: true
    description: 'Minimal Information about a Marker Specimen: specimen'
    aliases:
    - MIMARKS.specimen
    see_also:
    - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3367316
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - source_mat_id
    - rel_to_oxygen
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - size_frac
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - target_gene
    - target_subfragment
    - pcr_primers
    - mid
    - adapters
    - pcr_cond
    - seq_meth
    - seq_quality_check
    - chimera_check
    - assembly_software
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        recommended: true
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      source_mat_id:
        recommended: true
      rel_to_oxygen:
        required: false
      samp_collec_device:
        recommended: true
      samp_collec_method:
        recommended: true
      samp_mat_process:
        recommended: true
      size_frac:
        required: false
      samp_size:
        recommended: true
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        recommended: true
      lib_reads_seqd:
        recommended: true
      lib_layout:
        recommended: true
      lib_vector:
        recommended: true
      lib_screen:
        recommended: true
      target_gene:
        required: true
      target_subfragment:
        recommended: true
      pcr_primers:
        recommended: true
      mid:
        recommended: true
      adapters:
        recommended: true
      pcr_cond:
        recommended: true
      seq_meth:
        required: true
      seq_quality_check:
        recommended: true
      chimera_check:
        recommended: true
      assembly_software:
        recommended: true
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIMARKS survey:
    mixin: true
    description: 'Minimal Information about a Marker Specimen: survey'
    aliases:
    - MIMARKS.survey
    see_also:
    - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3367316
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - subspecf_gen_lin
    - extrachrom_elements
    - source_mat_id
    - biotic_relationship
    - trophic_level
    - rel_to_oxygen
    - isol_growth_condt
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - target_gene
    - target_subfragment
    - pcr_primers
    - pcr_cond
    - seq_meth
    - seq_quality_check
    - chimera_check
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        required: false
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      subspecf_gen_lin:
        recommended: true
      extrachrom_elements:
        required: false
      source_mat_id:
        recommended: true
      biotic_relationship:
        recommended: true
      trophic_level:
        recommended: true
      rel_to_oxygen:
        recommended: true
      isol_growth_condt:
        required: true
      samp_collec_device:
        required: false
      samp_collec_method:
        required: false
      samp_mat_process:
        recommended: true
      samp_size:
        required: false
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      target_gene:
        required: true
      target_subfragment:
        recommended: true
      pcr_primers:
        recommended: true
      pcr_cond:
        recommended: true
      seq_meth:
        required: true
      seq_quality_check:
        recommended: true
      chimera_check:
        recommended: true
      associated resource:
        recommended: true
      sop:
        recommended: true
  MISAG:
    mixin: true
    description: Minimum Information About a Single Amplified Genome
    aliases:
    - MISAG
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - ref_biomaterial
    - source_mat_id
    - rel_to_oxygen
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - size_frac
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - mid
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - x_16s_recover
    - x_16s_recover_software
    - trnas
    - trna_ext_software
    - compl_score
    - compl_software
    - compl_appr
    - contam_score
    - contam_screen_input
    - contam_screen_param
    - decontam_software
    - sort_tech
    - single_cell_lysis_appr
    - single_cell_lysis_prot
    - wga_amp_appr
    - wga_amp_kit
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        recommended: true
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      rel_to_oxygen:
        required: false
      samp_collec_device:
        recommended: true
      samp_collec_method:
        recommended: true
      samp_mat_process:
        recommended: true
      size_frac:
        required: false
      samp_size:
        recommended: true
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        recommended: true
      lib_reads_seqd:
        recommended: true
      lib_layout:
        recommended: true
      lib_vector:
        recommended: true
      lib_screen:
        recommended: true
      mid:
        recommended: true
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        required: true
      assembly_qual:
        required: true
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        required: false
      number_contig:
        required: false
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      x_16s_recover:
        required: false
      x_16s_recover_software:
        required: false
      trnas:
        required: false
      trna_ext_software:
        required: false
      compl_score:
        required: true
      compl_software:
        required: true
      compl_appr:
        required: false
      contam_score:
        required: true
      contam_screen_input:
        required: false
      contam_screen_param:
        required: false
      decontam_software:
        required: false
      sort_tech:
        required: true
      single_cell_lysis_appr:
        required: true
      single_cell_lysis_prot:
        required: false
      wga_amp_appr:
        required: true
      wga_amp_kit:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIMAG:
    mixin: true
    description: Minimum Information About a Metagenome-Assembled Genome
    aliases:
    - MIMAG
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - ref_biomaterial
    - source_mat_id
    - rel_to_oxygen
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - size_frac
    - samp_size
    - samp_vol_we_dna_ext
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - mid
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - x_16s_recover
    - x_16s_recover_software
    - trnas
    - trna_ext_software
    - compl_score
    - compl_software
    - compl_appr
    - contam_score
    - contam_screen_input
    - contam_screen_param
    - decontam_software
    - bin_param
    - bin_software
    - reassembly_bin
    - mag_cov_software
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        recommended: true
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      rel_to_oxygen:
        required: false
      samp_collec_device:
        recommended: true
      samp_collec_method:
        recommended: true
      samp_mat_process:
        recommended: true
      size_frac:
        required: false
      samp_size:
        recommended: true
      samp_vol_we_dna_ext:
        required: false
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        recommended: true
      lib_reads_seqd:
        recommended: true
      lib_layout:
        recommended: true
      lib_vector:
        recommended: true
      lib_screen:
        recommended: true
      mid:
        recommended: true
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        required: true
      assembly_qual:
        required: true
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        required: false
      number_contig:
        required: false
      feat_pred:
        required: false
      ref_db:
        required: false
      sim_search_meth:
        required: false
      tax_class:
        required: false
      x_16s_recover:
        required: false
      x_16s_recover_software:
        required: false
      trnas:
        required: false
      trna_ext_software:
        required: false
      compl_score:
        required: true
      compl_software:
        required: true
      compl_appr:
        required: false
      contam_score:
        required: true
      contam_screen_input:
        required: false
      contam_screen_param:
        required: false
      decontam_software:
        required: false
      bin_param:
        required: true
      bin_software:
        required: true
      reassembly_bin:
        required: false
      mag_cov_software:
        required: false
      associated resource:
        recommended: true
      sop:
        recommended: true
  MIUVIG:
    mixin: true
    description: Minimum Information About an Uncultivated Virus Genome
    aliases:
    - MIUVIG
    see_also: []
    slots:
    - samp_name
    - samp_taxon_id
    - project_name
    - experimental_factor
    - lat_lon
    - geo_loc_name
    - collection_date
    - neg_cont_type
    - pos_cont_type
    - env_broad_scale
    - env_local_scale
    - env_medium
    - estimated_size
    - ref_biomaterial
    - source_mat_id
    - pathogenicity
    - biotic_relationship
    - specific_host
    - host_spec_range
    - host_disease_stat
    - samp_collec_device
    - samp_collec_method
    - samp_mat_process
    - size_frac
    - samp_size
    - samp_vol_we_dna_ext
    - source_uvig
    - virus_enrich_appr
    - nucl_acid_ext
    - nucl_acid_amp
    - lib_size
    - lib_reads_seqd
    - lib_layout
    - lib_vector
    - lib_screen
    - mid
    - adapters
    - seq_meth
    - tax_ident
    - assembly_qual
    - assembly_name
    - assembly_software
    - annot
    - number_contig
    - feat_pred
    - ref_db
    - sim_search_meth
    - tax_class
    - trnas
    - trna_ext_software
    - compl_score
    - compl_software
    - compl_appr
    - sort_tech
    - single_cell_lysis_appr
    - single_cell_lysis_prot
    - wga_amp_appr
    - wga_amp_kit
    - bin_param
    - bin_software
    - reassembly_bin
    - mag_cov_software
    - vir_ident_software
    - pred_genome_type
    - pred_genome_struc
    - detec_type
    - otu_class_appr
    - otu_seq_comp_appr
    - otu_db
    - host_pred_appr
    - host_pred_est_acc
    - associated resource
    - sop
    slot_usage:
      samp_name:
        required: true
      samp_taxon_id:
        required: true
      project_name:
        required: true
      experimental_factor:
        recommended: true
      lat_lon:
        required: true
      geo_loc_name:
        required: true
      collection_date:
        required: true
      neg_cont_type:
        recommended: true
      pos_cont_type:
        recommended: true
      env_broad_scale:
        required: true
      env_local_scale:
        required: true
      env_medium:
        required: true
      estimated_size:
        required: false
      ref_biomaterial:
        required: false
      source_mat_id:
        recommended: true
      pathogenicity:
        required: false
      biotic_relationship:
        required: false
      specific_host:
        required: false
      host_spec_range:
        required: false
      host_disease_stat:
        recommended: true
      samp_collec_device:
        recommended: true
      samp_collec_method:
        recommended: true
      samp_mat_process:
        recommended: true
      size_frac:
        recommended: true
      samp_size:
        recommended: true
      samp_vol_we_dna_ext:
        required: false
      source_uvig:
        required: true
      virus_enrich_appr:
        required: true
      nucl_acid_ext:
        recommended: true
      nucl_acid_amp:
        recommended: true
      lib_size:
        recommended: true
      lib_reads_seqd:
        recommended: true
      lib_layout:
        recommended: true
      lib_vector:
        recommended: true
      lib_screen:
        recommended: true
      mid:
        recommended: true
      adapters:
        recommended: true
      seq_meth:
        required: true
      tax_ident:
        required: false
      assembly_qual:
        required: true
      assembly_name:
        recommended: true
      assembly_software:
        required: true
      annot:
        required: false
      number_contig:
        required: true
      feat_pred:
        recommended: true
      ref_db:
        recommended: true
      sim_search_meth:
        recommended: true
      tax_class:
        recommended: true
      trnas:
        required: false
      trna_ext_software:
        required: false
      compl_score:
        recommended: true
      compl_software:
        required: false
      compl_appr:
        recommended: true
      sort_tech:
        recommended: true
      single_cell_lysis_appr:
        recommended: true
      single_cell_lysis_prot:
        recommended: true
      wga_amp_appr:
        recommended: true
      wga_amp_kit:
        recommended: true
      bin_param:
        recommended: true
      bin_software:
        recommended: true
      reassembly_bin:
        recommended: true
      mag_cov_software:
        required: false
      vir_ident_software:
        required: true
      pred_genome_type:
        required: true
      pred_genome_struc:
        required: true
      detec_type:
        required: true
      otu_class_appr:
        recommended: true
      otu_seq_comp_appr:
        recommended: true
      otu_db:
        recommended: true
      host_pred_appr:
        recommended: true
      host_pred_est_acc:
        recommended: true
      associated resource:
        recommended: true
      sop:
        recommended: true
  air MIGS eukaryote:
    is_a: air
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package air'
  air MIGS bacteria:
    is_a: air
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package air'
  air MIGS plant:
    is_a: air
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package air'
  air MIGS virus:
    is_a: air
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package air'
  air MIGS org:
    is_a: air
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package air'
  air MIMS:
    is_a: air
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package air
  air MIMARKS specimen:
    is_a: air
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package air'
  air MIMARKS survey:
    is_a: air
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package air'
  air MISAG:
    is_a: air
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package air
  air MIMAG:
    is_a: air
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package air
  air MIUVIG:
    is_a: air
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package air
  built environment MIGS eukaryote:
    is_a: built environment
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package built environment'
  built environment MIGS bacteria:
    is_a: built environment
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package built environment'
  built environment MIGS plant:
    is_a: built environment
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package built environment'
  built environment MIGS virus:
    is_a: built environment
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package built environment'
  built environment MIGS org:
    is_a: built environment
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package built environment'
  built environment MIMS:
    is_a: built environment
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package built environment
  built environment MIMARKS specimen:
    is_a: built environment
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package built environment'
  built environment MIMARKS survey:
    is_a: built environment
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package built environment'
  built environment MISAG:
    is_a: built environment
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package built environment
  built environment MIMAG:
    is_a: built environment
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package built environment
  built environment MIUVIG:
    is_a: built environment
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package built environment
  host-associated MIGS eukaryote:
    is_a: host-associated
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package host-associated'
  host-associated MIGS bacteria:
    is_a: host-associated
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package host-associated'
  host-associated MIGS plant:
    is_a: host-associated
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package host-associated'
  host-associated MIGS virus:
    is_a: host-associated
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package host-associated'
  host-associated MIGS org:
    is_a: host-associated
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package host-associated'
  host-associated MIMS:
    is_a: host-associated
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package host-associated
  host-associated MIMARKS specimen:
    is_a: host-associated
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package host-associated'
  host-associated MIMARKS survey:
    is_a: host-associated
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package host-associated'
  host-associated MISAG:
    is_a: host-associated
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package host-associated
  host-associated MIMAG:
    is_a: host-associated
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package host-associated
  host-associated MIUVIG:
    is_a: host-associated
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package host-associated
  human-associated MIGS eukaryote:
    is_a: human-associated
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package human-associated'
  human-associated MIGS bacteria:
    is_a: human-associated
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-associated'
  human-associated MIGS plant:
    is_a: human-associated
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package human-associated'
  human-associated MIGS virus:
    is_a: human-associated
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-associated'
  human-associated MIGS org:
    is_a: human-associated
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package human-associated'
  human-associated MIMS:
    is_a: human-associated
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package human-associated
  human-associated MIMARKS specimen:
    is_a: human-associated
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package human-associated'
  human-associated MIMARKS survey:
    is_a: human-associated
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package human-associated'
  human-associated MISAG:
    is_a: human-associated
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package human-associated
  human-associated MIMAG:
    is_a: human-associated
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package human-associated
  human-associated MIUVIG:
    is_a: human-associated
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package human-associated
  human-gut MIGS eukaryote:
    is_a: human-gut
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package human-gut'
  human-gut MIGS bacteria:
    is_a: human-gut
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-gut'
  human-gut MIGS plant:
    is_a: human-gut
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package human-gut'
  human-gut MIGS virus:
    is_a: human-gut
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-gut'
  human-gut MIGS org:
    is_a: human-gut
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package human-gut'
  human-gut MIMS:
    is_a: human-gut
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package human-gut
  human-gut MIMARKS specimen:
    is_a: human-gut
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package human-gut'
  human-gut MIMARKS survey:
    is_a: human-gut
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package human-gut'
  human-gut MISAG:
    is_a: human-gut
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package human-gut
  human-gut MIMAG:
    is_a: human-gut
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package human-gut
  human-gut MIUVIG:
    is_a: human-gut
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package human-gut
  human-oral MIGS eukaryote:
    is_a: human-oral
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package human-oral'
  human-oral MIGS bacteria:
    is_a: human-oral
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-oral'
  human-oral MIGS plant:
    is_a: human-oral
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package human-oral'
  human-oral MIGS virus:
    is_a: human-oral
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-oral'
  human-oral MIGS org:
    is_a: human-oral
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package human-oral'
  human-oral MIMS:
    is_a: human-oral
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package human-oral
  human-oral MIMARKS specimen:
    is_a: human-oral
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package human-oral'
  human-oral MIMARKS survey:
    is_a: human-oral
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package human-oral'
  human-oral MISAG:
    is_a: human-oral
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package human-oral
  human-oral MIMAG:
    is_a: human-oral
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package human-oral
  human-oral MIUVIG:
    is_a: human-oral
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package human-oral
  human-skin MIGS eukaryote:
    is_a: human-skin
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package human-skin'
  human-skin MIGS bacteria:
    is_a: human-skin
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-skin'
  human-skin MIGS plant:
    is_a: human-skin
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package human-skin'
  human-skin MIGS virus:
    is_a: human-skin
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-skin'
  human-skin MIGS org:
    is_a: human-skin
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package human-skin'
  human-skin MIMS:
    is_a: human-skin
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package human-skin
  human-skin MIMARKS specimen:
    is_a: human-skin
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package human-skin'
  human-skin MIMARKS survey:
    is_a: human-skin
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package human-skin'
  human-skin MISAG:
    is_a: human-skin
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package human-skin
  human-skin MIMAG:
    is_a: human-skin
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package human-skin
  human-skin MIUVIG:
    is_a: human-skin
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package human-skin
  human-vaginal MIGS eukaryote:
    is_a: human-vaginal
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package human-vaginal'
  human-vaginal MIGS bacteria:
    is_a: human-vaginal
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-vaginal'
  human-vaginal MIGS plant:
    is_a: human-vaginal
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package human-vaginal'
  human-vaginal MIGS virus:
    is_a: human-vaginal
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package human-vaginal'
  human-vaginal MIGS org:
    is_a: human-vaginal
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package human-vaginal'
  human-vaginal MIMS:
    is_a: human-vaginal
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package human-vaginal
  human-vaginal MIMARKS specimen:
    is_a: human-vaginal
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package human-vaginal'
  human-vaginal MIMARKS survey:
    is_a: human-vaginal
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package human-vaginal'
  human-vaginal MISAG:
    is_a: human-vaginal
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package human-vaginal
  human-vaginal MIMAG:
    is_a: human-vaginal
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package human-vaginal
  human-vaginal MIUVIG:
    is_a: human-vaginal
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package human-vaginal
  hydrocarbon resources-cores MIGS eukaryote:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package hydrocarbon resources-cores'
  hydrocarbon resources-cores MIGS bacteria:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package hydrocarbon resources-cores'
  hydrocarbon resources-cores MIGS plant:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package hydrocarbon resources-cores'
  hydrocarbon resources-cores MIGS virus:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package hydrocarbon resources-cores'
  hydrocarbon resources-cores MIGS org:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package hydrocarbon resources-cores'
  hydrocarbon resources-cores MIMS:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package hydrocarbon resources-cores
  hydrocarbon resources-cores MIMARKS specimen:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package hydrocarbon resources-cores'
  hydrocarbon resources-cores MIMARKS survey:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package hydrocarbon resources-cores'
  hydrocarbon resources-cores MISAG:
    is_a: hydrocarbon resources-cores
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package hydrocarbon resources-cores
  hydrocarbon resources-cores MIMAG:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package hydrocarbon resources-cores
  hydrocarbon resources-cores MIUVIG:
    is_a: hydrocarbon resources-cores
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package hydrocarbon resources-cores
  hydrocarbon resources-fluids_swabs MIGS eukaryote:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package hydrocarbon resources-fluids_swabs'
  hydrocarbon resources-fluids_swabs MIGS bacteria:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package hydrocarbon resources-fluids_swabs'
  hydrocarbon resources-fluids_swabs MIGS plant:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package hydrocarbon resources-fluids_swabs'
  hydrocarbon resources-fluids_swabs MIGS virus:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package hydrocarbon resources-fluids_swabs'
  hydrocarbon resources-fluids_swabs MIGS org:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package hydrocarbon resources-fluids_swabs'
  hydrocarbon resources-fluids_swabs MIMS:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package hydrocarbon resources-fluids_swabs
  hydrocarbon resources-fluids_swabs MIMARKS specimen:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package hydrocarbon resources-fluids_swabs'
  hydrocarbon resources-fluids_swabs MIMARKS survey:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package hydrocarbon resources-fluids_swabs'
  hydrocarbon resources-fluids_swabs MISAG:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package hydrocarbon resources-fluids_swabs
  hydrocarbon resources-fluids_swabs MIMAG:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package hydrocarbon resources-fluids_swabs
  hydrocarbon resources-fluids_swabs MIUVIG:
    is_a: hydrocarbon resources-fluids_swabs
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package hydrocarbon resources-fluids_swabs
  microbial mat_biofilm MIGS eukaryote:
    is_a: microbial mat_biofilm
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package microbial mat_biofilm'
  microbial mat_biofilm MIGS bacteria:
    is_a: microbial mat_biofilm
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package microbial mat_biofilm'
  microbial mat_biofilm MIGS plant:
    is_a: microbial mat_biofilm
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package microbial mat_biofilm'
  microbial mat_biofilm MIGS virus:
    is_a: microbial mat_biofilm
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package microbial mat_biofilm'
  microbial mat_biofilm MIGS org:
    is_a: microbial mat_biofilm
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package microbial mat_biofilm'
  microbial mat_biofilm MIMS:
    is_a: microbial mat_biofilm
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package microbial mat_biofilm
  microbial mat_biofilm MIMARKS specimen:
    is_a: microbial mat_biofilm
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package microbial mat_biofilm'
  microbial mat_biofilm MIMARKS survey:
    is_a: microbial mat_biofilm
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package microbial mat_biofilm'
  microbial mat_biofilm MISAG:
    is_a: microbial mat_biofilm
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package microbial mat_biofilm
  microbial mat_biofilm MIMAG:
    is_a: microbial mat_biofilm
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package microbial mat_biofilm
  microbial mat_biofilm MIUVIG:
    is_a: microbial mat_biofilm
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package microbial mat_biofilm
  miscellaneous natural or artificial environment MIGS eukaryote:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package miscellaneous natural or artificial environment'
  miscellaneous natural or artificial environment MIGS bacteria:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package miscellaneous natural or
      artificial environment'
  miscellaneous natural or artificial environment MIGS plant:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package miscellaneous natural or artificial environment'
  miscellaneous natural or artificial environment MIGS virus:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package miscellaneous natural or
      artificial environment'
  miscellaneous natural or artificial environment MIGS org:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package miscellaneous natural or artificial environment'
  miscellaneous natural or artificial environment MIMS:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package miscellaneous natural or artificial environment
  miscellaneous natural or artificial environment MIMARKS specimen:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package miscellaneous natural or artificial environment'
  miscellaneous natural or artificial environment MIMARKS survey:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package miscellaneous natural or artificial environment'
  miscellaneous natural or artificial environment MISAG:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package miscellaneous natural or artificial environment
  miscellaneous natural or artificial environment MIMAG:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package miscellaneous natural or artificial environment
  miscellaneous natural or artificial environment MIUVIG:
    is_a: miscellaneous natural or artificial environment
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package miscellaneous natural or artificial
      environment
  plant-associated MIGS eukaryote:
    is_a: plant-associated
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package plant-associated'
  plant-associated MIGS bacteria:
    is_a: plant-associated
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package plant-associated'
  plant-associated MIGS plant:
    is_a: plant-associated
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package plant-associated'
  plant-associated MIGS virus:
    is_a: plant-associated
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package plant-associated'
  plant-associated MIGS org:
    is_a: plant-associated
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package plant-associated'
  plant-associated MIMS:
    is_a: plant-associated
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package plant-associated
  plant-associated MIMARKS specimen:
    is_a: plant-associated
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package plant-associated'
  plant-associated MIMARKS survey:
    is_a: plant-associated
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package plant-associated'
  plant-associated MISAG:
    is_a: plant-associated
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package plant-associated
  plant-associated MIMAG:
    is_a: plant-associated
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package plant-associated
  plant-associated MIUVIG:
    is_a: plant-associated
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package plant-associated
  sediment MIGS eukaryote:
    is_a: sediment
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package sediment'
  sediment MIGS bacteria:
    is_a: sediment
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package sediment'
  sediment MIGS plant:
    is_a: sediment
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package sediment'
  sediment MIGS virus:
    is_a: sediment
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package sediment'
  sediment MIGS org:
    is_a: sediment
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package sediment'
  sediment MIMS:
    is_a: sediment
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package sediment
  sediment MIMARKS specimen:
    is_a: sediment
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package sediment'
  sediment MIMARKS survey:
    is_a: sediment
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package sediment'
  sediment MISAG:
    is_a: sediment
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package sediment
  sediment MIMAG:
    is_a: sediment
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package sediment
  sediment MIUVIG:
    is_a: sediment
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package sediment
  soil MIGS eukaryote:
    is_a: soil
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package soil'
  soil MIGS bacteria:
    is_a: soil
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package soil'
  soil MIGS plant:
    is_a: soil
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package soil'
  soil MIGS virus:
    is_a: soil
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package soil'
  soil MIGS org:
    is_a: soil
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package soil'
  soil MIMS:
    is_a: soil
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package soil
  soil MIMARKS specimen:
    is_a: soil
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package soil'
  soil MIMARKS survey:
    is_a: soil
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package soil'
  soil MISAG:
    is_a: soil
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package soil
  soil MIMAG:
    is_a: soil
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package soil
  soil MIUVIG:
    is_a: soil
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package soil
  wastewater_sludge MIGS eukaryote:
    is_a: wastewater_sludge
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package wastewater_sludge'
  wastewater_sludge MIGS bacteria:
    is_a: wastewater_sludge
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package wastewater_sludge'
  wastewater_sludge MIGS plant:
    is_a: wastewater_sludge
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package wastewater_sludge'
  wastewater_sludge MIGS virus:
    is_a: wastewater_sludge
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package wastewater_sludge'
  wastewater_sludge MIGS org:
    is_a: wastewater_sludge
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package wastewater_sludge'
  wastewater_sludge MIMS:
    is_a: wastewater_sludge
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package wastewater_sludge
  wastewater_sludge MIMARKS specimen:
    is_a: wastewater_sludge
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package wastewater_sludge'
  wastewater_sludge MIMARKS survey:
    is_a: wastewater_sludge
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package wastewater_sludge'
  wastewater_sludge MISAG:
    is_a: wastewater_sludge
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package wastewater_sludge
  wastewater_sludge MIMAG:
    is_a: wastewater_sludge
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package wastewater_sludge
  wastewater_sludge MIUVIG:
    is_a: wastewater_sludge
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package wastewater_sludge
  water MIGS eukaryote:
    is_a: water
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package water'
  water MIGS bacteria:
    is_a: water
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package water'
  water MIGS plant:
    is_a: water
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package water'
  water MIGS virus:
    is_a: water
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package water'
  water MIGS org:
    is_a: water
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package water'
  water MIMS:
    is_a: water
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package water
  water MIMARKS specimen:
    is_a: water
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package water'
  water MIMARKS survey:
    is_a: water
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package water'
  water MISAG:
    is_a: water
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package water
  water MIMAG:
    is_a: water
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package water
  water MIUVIG:
    is_a: water
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package water
  symbiont-associated MIGS eukaryote:
    is_a: symbiont-associated
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package symbiont-associated'
  symbiont-associated MIGS bacteria:
    is_a: symbiont-associated
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package symbiont-associated'
  symbiont-associated MIGS plant:
    is_a: symbiont-associated
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package symbiont-associated'
  symbiont-associated MIGS virus:
    is_a: symbiont-associated
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package symbiont-associated'
  symbiont-associated MIGS org:
    is_a: symbiont-associated
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package symbiont-associated'
  symbiont-associated MIMS:
    is_a: symbiont-associated
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package symbiont-associated
  symbiont-associated MIMARKS specimen:
    is_a: symbiont-associated
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package symbiont-associated'
  symbiont-associated MIMARKS survey:
    is_a: symbiont-associated
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package symbiont-associated'
  symbiont-associated MISAG:
    is_a: symbiont-associated
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package symbiont-associated
  symbiont-associated MIMAG:
    is_a: symbiont-associated
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package symbiont-associated
  symbiont-associated MIUVIG:
    is_a: symbiont-associated
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package symbiont-associated
  food-human foods MIGS eukaryote:
    is_a: food-human foods
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package food-human foods'
  food-human foods MIGS bacteria:
    is_a: food-human foods
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-human foods'
  food-human foods MIGS plant:
    is_a: food-human foods
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package food-human foods'
  food-human foods MIGS virus:
    is_a: food-human foods
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-human foods'
  food-human foods MIGS org:
    is_a: food-human foods
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package food-human foods'
  food-human foods MIMS:
    is_a: food-human foods
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package food-human foods
  food-human foods MIMARKS specimen:
    is_a: food-human foods
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package food-human foods'
  food-human foods MIMARKS survey:
    is_a: food-human foods
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package food-human foods'
  food-human foods MISAG:
    is_a: food-human foods
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package food-human foods
  food-human foods MIMAG:
    is_a: food-human foods
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package food-human foods
  food-human foods MIUVIG:
    is_a: food-human foods
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package food-human foods
  food-animal and animal feed MIGS eukaryote:
    is_a: food-animal and animal feed
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package food-animal and animal feed'
  food-animal and animal feed MIGS bacteria:
    is_a: food-animal and animal feed
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-animal and animal
      feed'
  food-animal and animal feed MIGS plant:
    is_a: food-animal and animal feed
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package food-animal and animal feed'
  food-animal and animal feed MIGS virus:
    is_a: food-animal and animal feed
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-animal and animal
      feed'
  food-animal and animal feed MIGS org:
    is_a: food-animal and animal feed
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package food-animal and animal feed'
  food-animal and animal feed MIMS:
    is_a: food-animal and animal feed
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package food-animal and animal feed
  food-animal and animal feed MIMARKS specimen:
    is_a: food-animal and animal feed
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package food-animal and animal feed'
  food-animal and animal feed MIMARKS survey:
    is_a: food-animal and animal feed
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package food-animal and animal feed'
  food-animal and animal feed MISAG:
    is_a: food-animal and animal feed
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package food-animal and animal feed
  food-animal and animal feed MIMAG:
    is_a: food-animal and animal feed
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package food-animal and animal feed
  food-animal and animal feed MIUVIG:
    is_a: food-animal and animal feed
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package food-animal and animal feed
  food-food production facility MIGS eukaryote:
    is_a: food-food production facility
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package food-food production facility'
  food-food production facility MIGS bacteria:
    is_a: food-food production facility
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-food production facility'
  food-food production facility MIGS plant:
    is_a: food-food production facility
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package food-food production facility'
  food-food production facility MIGS virus:
    is_a: food-food production facility
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-food production facility'
  food-food production facility MIGS org:
    is_a: food-food production facility
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package food-food production facility'
  food-food production facility MIMS:
    is_a: food-food production facility
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package food-food production facility
  food-food production facility MIMARKS specimen:
    is_a: food-food production facility
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package food-food production facility'
  food-food production facility MIMARKS survey:
    is_a: food-food production facility
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package food-food production facility'
  food-food production facility MISAG:
    is_a: food-food production facility
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package food-food production facility
  food-food production facility MIMAG:
    is_a: food-food production facility
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package food-food production facility
  food-food production facility MIUVIG:
    is_a: food-food production facility
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package food-food production facility
  food-farm environment MIGS eukaryote:
    is_a: food-farm environment
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package food-farm environment'
  food-farm environment MIGS bacteria:
    is_a: food-farm environment
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-farm environment'
  food-farm environment MIGS plant:
    is_a: food-farm environment
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package food-farm environment'
  food-farm environment MIGS virus:
    is_a: food-farm environment
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package food-farm environment'
  food-farm environment MIGS org:
    is_a: food-farm environment
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package food-farm environment'
  food-farm environment MIMS:
    is_a: food-farm environment
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package food-farm environment
  food-farm environment MIMARKS specimen:
    is_a: food-farm environment
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package food-farm environment'
  food-farm environment MIMARKS survey:
    is_a: food-farm environment
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package food-farm environment'
  food-farm environment MISAG:
    is_a: food-farm environment
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package food-farm environment
  food-farm environment MIMAG:
    is_a: food-farm environment
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package food-farm environment
  food-farm environment MIUVIG:
    is_a: food-farm environment
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package food-farm environment
  agriculture MIGS eukaryote:
    is_a: agriculture
    mixins:
    - MIGS eukaryote
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      eukaryote with environmental package agriculture'
  agriculture MIGS bacteria:
    is_a: agriculture
    mixins:
    - MIGS bacteria
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package agriculture'
  agriculture MIGS plant:
    is_a: agriculture
    mixins:
    - MIGS plant
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      plant with environmental package agriculture'
  agriculture MIGS virus:
    is_a: agriculture
    mixins:
    - MIGS virus
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      cultured bacteria/archaea with environmental package agriculture'
  agriculture MIGS org:
    is_a: agriculture
    mixins:
    - MIGS org
    description: 'Combinatorial checklist Minimal Information about a Genome Sequence:
      org with environmental package agriculture'
  agriculture MIMS:
    is_a: agriculture
    mixins:
    - MIMS
    description: Combinatorial checklist Metagenome or Environmental with environmental
      package agriculture
  agriculture MIMARKS specimen:
    is_a: agriculture
    mixins:
    - MIMARKS specimen
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      specimen with environmental package agriculture'
  agriculture MIMARKS survey:
    is_a: agriculture
    mixins:
    - MIMARKS survey
    description: 'Combinatorial checklist Minimal Information about a Marker Specimen:
      survey with environmental package agriculture'
  agriculture MISAG:
    is_a: agriculture
    mixins:
    - MISAG
    description: Combinatorial checklist Minimum Information About a Single Amplified
      Genome with environmental package agriculture
  agriculture MIMAG:
    is_a: agriculture
    mixins:
    - MIMAG
    description: Combinatorial checklist Minimum Information About a Metagenome-Assembled
      Genome with environmental package agriculture
  agriculture MIUVIG:
    is_a: agriculture
    mixins:
    - MIUVIG
    description: Combinatorial checklist Minimum Information About an Uncultivated
      Virus Genome with environmental package agriculture
subsets: {}
enums: {}