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environment_jero.yml
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environment_jero.yml
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name: jero
channels:
- simpleitk
- pytorch
- pytorch-test
- anaconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=4.5=1_gnu
- absl-py=0.15.0=pyhd3eb1b0_0
- aiohttp=3.8.1=py39h7f8727e_1
- aiosignal=1.2.0=pyhd3eb1b0_0
- anyio=3.5.0=py39h06a4308_0
- aom=3.3.0=h27087fc_1
- appdirs=1.4.4=pyhd3eb1b0_0
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py39h7f8727e_0
- asttokens=2.0.5=pyhd3eb1b0_0
- async-timeout=4.0.1=pyhd3eb1b0_0
- attrs=21.4.0=pyhd3eb1b0_0
- babel=2.9.1=pyhd3eb1b0_0
- backcall=0.2.0=pyhd3eb1b0_0
- backports=1.1=pyhd3eb1b0_0
- backports.functools_lru_cache=1.6.4=pyhd3eb1b0_0
- beautifulsoup4=4.11.1=py39h06a4308_0
- black=19.10b0=py_0
- blas=1.0=mkl
- bleach=4.1.0=pyhd3eb1b0_0
- blinker=1.4=py39h06a4308_0
- bottleneck=1.3.4=py39hce1f21e_0
- brotli=1.0.9=he6710b0_2
- brotlipy=0.7.0=py39h27cfd23_1003
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.18.1=h7f8727e_0
- ca-certificates=2022.07.19=h06a4308_0
- cached-property=1.5.2=py_0
- cached_property=1.5.2=pyha770c72_1
- cachetools=4.2.2=pyhd3eb1b0_0
- certifi=2022.6.15=py39h06a4308_0
- cffi=1.15.0=py39hd667e15_1
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- click=8.0.4=py39h06a4308_0
- cloudpickle=2.0.0=pyhd3eb1b0_0
- colorama=0.4.4=pyhd3eb1b0_0
- cryptography=3.4.8=py39hd23ed53_0
- cudatoolkit=11.3.1=h2bc3f7f_2
- cycler=0.11.0=pyhd3eb1b0_0
- cytoolz=0.11.0=py39h27cfd23_0
- dask-core=2022.2.1=pyhd3eb1b0_0
- dataclasses=0.8=pyh6d0b6a4_7
- dbus=1.13.18=hb2f20db_0
- debugpy=1.5.1=py39h295c915_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- deprecated=1.2.13=pyh6c4a22f_0
- dill=0.3.5.1=pyhd8ed1ab_0
- entrypoints=0.4=py39h06a4308_0
- et_xmlfile=1.1.0=py39h06a4308_0
- executing=0.8.3=pyhd3eb1b0_0
- expat=2.4.4=h295c915_0
- ffmpeg=4.2.2=h20bf706_0
- flit-core=3.6.0=pyhd3eb1b0_0
- fontconfig=2.13.1=h6c09931_0
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.11.0=h70c0345_0
- frozenlist=1.2.0=py39h7f8727e_0
- fsspec=2022.2.0=pyhd3eb1b0_0
- future=0.18.2=py39h06a4308_1
- gettext=0.21.0=hf68c758_0
- giflib=5.2.1=h7b6447c_0
- glib=2.56.2=hd408876_0
- gmp=6.2.1=h2531618_2
- gnutls=3.6.15=he1e5248_0
- google-auth=2.6.0=pyhd3eb1b0_0
- google-auth-oauthlib=0.4.4=pyhd3eb1b0_0
- grpcio=1.42.0=py39hce63b2e_0
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- h5py=3.6.0=py39ha0f2276_0
- hdf5=1.10.6=nompi_h6a2412b_1114
- humanize=4.2.3=pyhd8ed1ab_0
- icu=58.2=he6710b0_3
- idna=3.3=pyhd3eb1b0_0
- imagecodecs-lite=2019.12.3=py39hd257fcd_5
- imageio=2.9.0=pyhd3eb1b0_0
- importlib-metadata=4.11.3=py39h06a4308_0
- importlib_resources=5.2.0=pyhd3eb1b0_1
- intel-openmp=2021.4.0=h06a4308_3561
- ipykernel=6.9.1=py39h06a4308_0
- ipython=8.2.0=py39h06a4308_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- itables=0.4.7=pyhd8ed1ab_0
- jedi=0.18.1=py39h06a4308_1
- jinja2=3.0.3=pyhd3eb1b0_0
- joblib=1.1.0=pyhd3eb1b0_0
- jpeg=9e=h7f8727e_0
- json5=0.9.6=pyhd3eb1b0_0
- jsonschema=4.4.0=py39h06a4308_0
- jupyter_client=7.2.2=py39h06a4308_0
- jupyter_core=4.9.2=py39h06a4308_0
- jupyter_server=1.13.5=pyhd3eb1b0_0
- jupyterlab=3.3.2=pyhd3eb1b0_0
- jupyterlab_pygments=0.1.2=py_0
- jupyterlab_server=2.12.0=py39h06a4308_0
- kiwisolver=1.3.2=py39h295c915_0
- krb5=1.19.2=hac12032_0
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.35.1=h7274673_9
- libblas=3.9.0=12_linux64_mkl
- libcblas=3.9.0=12_linux64_mkl
- libcurl=7.82.0=h0b77cf5_0
- libdrm=2.4.109=h7f98852_0
- libedit=3.1.20210910=h7f8727e_0
- libev=4.33=h7f8727e_1
- libffi=3.3=he6710b0_2
- libgcc-ng=11.2.0=h1234567_1
- libgfortran-ng=9.3.0=ha5ec8a7_17
- libgfortran5=9.3.0=ha5ec8a7_17
- libgomp=11.2.0=h1234567_1
- libiconv=1.16=h7f8727e_2
- libidn2=2.3.2=h7f8727e_0
- liblapack=3.9.0=12_linux64_mkl
- libnghttp2=1.46.0=hce63b2e_0
- libnsl=2.0.0=h7f98852_0
- libopus=1.3.1=h7b6447c_0
- libpciaccess=0.16=h516909a_0
- libpng=1.6.37=hbc83047_0
- libprotobuf=3.19.1=h4ff587b_0
- libsodium=1.0.18=h7b6447c_0
- libssh2=1.10.0=h8f2d780_0
- libstdcxx-ng=12.1.0=ha89aaad_16
- libtasn1=4.16.0=h27cfd23_0
- libtiff=4.2.0=h85742a9_0
- libunistring=0.9.10=h27cfd23_0
- libuuid=1.0.3=h7f8727e_2
- libuv=1.40.0=h7b6447c_0
- libva=2.14.0=h7f98852_0
- libvpx=1.7.0=h439df22_0
- libwebp=1.2.0=h89dd481_0
- libwebp-base=1.2.0=h27cfd23_0
- libxcb=1.14=h7b6447c_0
- libxml2=2.9.12=h03d6c58_0
- libxslt=1.1.34=hc22bd24_0
- libzlib=1.2.11=h36c2ea0_1013
- llvm-openmp=14.0.4=he0ac6c6_0
- locket=0.2.1=py39h06a4308_2
- lxml=4.8.0=py39h1f438cf_0
- lz4-c=1.9.3=h295c915_1
- markdown=3.3.4=py39h06a4308_0
- markupsafe=2.0.1=py39h27cfd23_0
- matplotlib=3.5.1=py39h06a4308_1
- matplotlib-base=3.5.1=py39ha18d171_1
- matplotlib-inline=0.1.2=pyhd3eb1b0_2
- mistune=0.8.4=py39h27cfd23_1000
- mkl=2021.4.0=h06a4308_640
- mkl-service=2.4.0=py39h7f8727e_0
- mkl_fft=1.3.1=py39hd3c417c_0
- mkl_random=1.2.2=py39h51133e4_0
- mrcfile=1.3.0=pyh44b312d_0
- multidict=5.2.0=py39h7f8727e_2
- munkres=1.1.4=py_0
- mypy_extensions=0.4.3=py39h06a4308_1
- nbclassic=0.3.5=pyhd3eb1b0_0
- nbclient=0.5.13=py39h06a4308_0
- nbconvert=6.4.4=py39h06a4308_0
- nbformat=5.3.0=py39h06a4308_0
- ncurses=6.3=h7f8727e_2
- nest-asyncio=1.5.5=py39h06a4308_0
- nettle=3.7.3=hbbd107a_1
- networkx=2.7.1=pyhd3eb1b0_0
- nibabel=4.0.1=pyhd8ed1ab_0
- ninja=1.10.2=h06a4308_5
- ninja-base=1.10.2=hd09550d_5
- notebook=6.4.8=py39h06a4308_0
- numexpr=2.8.1=py39h6abb31d_0
- numpy=1.21.5=py39he7a7128_2
- numpy-base=1.21.5=py39hf524024_2
- oauthlib=3.2.0=pyhd3eb1b0_0
- olefile=0.46=pyhd3eb1b0_0
- openh264=2.1.1=h4ff587b_0
- openjpeg=2.4.0=h3ad879b_0
- openpyxl=3.0.9=pyhd3eb1b0_0
- openssl=1.1.1q=h7f8727e_0
- packaging=21.3=pyhd3eb1b0_0
- pandas=1.4.2=py39h295c915_0
- pandoc=2.12=h06a4308_0
- pandocfilters=1.5.0=pyhd3eb1b0_0
- parso=0.8.3=pyhd3eb1b0_0
- partd=1.2.0=pyhd3eb1b0_1
- pathspec=0.7.0=py_0
- pcre=8.45=h295c915_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=9.0.1=py39h22f2fdc_0
- pip=21.2.4=py39h06a4308_0
- platformdirs=2.4.0=pyhd3eb1b0_0
- prometheus_client=0.13.1=pyhd3eb1b0_0
- prompt-toolkit=3.0.20=pyhd3eb1b0_0
- protobuf=3.19.1=py39h295c915_0
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pure_eval=0.2.2=pyhd3eb1b0_0
- pyasn1=0.4.8=pyhd3eb1b0_0
- pyasn1-modules=0.2.8=py_0
- pycparser=2.21=pyhd3eb1b0_0
- pydeprecate=0.3.2=pyhd8ed1ab_0
- pydicom=2.3.0=pyh6c4a22f_0
- pygments=2.11.2=pyhd3eb1b0_0
- pyjwt=2.1.0=py39h06a4308_0
- pyopenssl=20.0.1=pyhd8ed1ab_0
- pyparsing=3.0.4=pyhd3eb1b0_0
- pyqt=5.9.2=py39h2531618_6
- pyrsistent=0.18.0=py39heee7806_0
- pysocks=1.7.1=py39h06a4308_0
- python=3.9.12=h12debd9_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-fastjsonschema=2.15.1=pyhd3eb1b0_0
- python_abi=3.9=2_cp39
- pytorch=1.12.0=py3.9_cuda11.3_cudnn8.3.2_0
- pytorch-lightning=1.6.0=pyhd8ed1ab_0
- pytorch-mutex=1.0=cuda
- pytz=2021.3=pyhd3eb1b0_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pywavelets=1.3.0=py39h7f8727e_0
- pyyaml=6.0=py39h7f8727e_1
- pyzmq=22.3.0=py39h295c915_2
- qt=5.9.7=h5867ecd_1
- readline=8.1.2=h7f8727e_1
- regex=2022.3.15=py39h7f8727e_0
- requests=2.27.1=pyhd3eb1b0_0
- requests-oauthlib=1.3.0=py_0
- rsa=4.7.2=pyhd3eb1b0_1
- scikit-image=0.19.2=py39h51133e4_0
- scikit-learn=1.0.2=py39h51133e4_1
- scipy=1.5.3=py39hee8e79c_0
- seaborn=0.11.2=pyhd3eb1b0_0
- send2trash=1.8.0=pyhd3eb1b0_1
- setuptools=59.5.0=py39hf3d152e_0
- simpleitk=2.1.1=py39h3fd9d12_0
- sip=4.19.13=py39h295c915_0
- six=1.16.0=pyhd3eb1b0_1
- sniffio=1.2.0=py39h06a4308_1
- sqlite=3.38.2=hc218d9a_0
- stack_data=0.2.0=pyhd3eb1b0_0
- svt-av1=1.1.0=h27087fc_1
- tbb=2021.5.0=hd09550d_0
- tensorboard=2.9.1=pyhd8ed1ab_0
- tensorboard-data-server=0.6.0=py39hd97740a_2
- tensorboard-plugin-wit=1.6.0=py_0
- terminado=0.13.1=py39h06a4308_0
- testpath=0.5.0=pyhd3eb1b0_0
- threadpoolctl=2.2.0=pyh0d69192_0
- tifffile=2020.6.3=py_0
- tk=8.6.11=h1ccaba5_0
- toml=0.10.2=pyhd3eb1b0_0
- tomli=1.2.2=pyhd3eb1b0_0
- tomopy=1.11.0=py39h10ffb3b_101
- toolz=0.11.2=pyhd3eb1b0_0
- torchaudio=0.12.0=py39_cu113
- torchinfo=1.7.0=pyhd8ed1ab_0
- torchio=0.18.82=pyhd8ed1ab_0
- torchmetrics=0.9.2=pyhd8ed1ab_0
- torchvision=0.13.0=py39_cu113
- tornado=6.1=py39h27cfd23_0
- tqdm=4.64.0=py39h06a4308_0
- traitlets=5.1.1=pyhd3eb1b0_0
- typed-ast=1.4.3=py39h7f8727e_1
- typing-extensions=4.1.1=hd3eb1b0_0
- typing_extensions=4.1.1=pyh06a4308_0
- tzdata=2022a=hda174b7_0
- urllib3=1.26.9=py39h06a4308_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py39h06a4308_1
- websocket-client=0.58.0=py39h06a4308_4
- werkzeug=2.0.3=pyhd3eb1b0_0
- wheel=0.37.1=pyhd3eb1b0_0
- wrapt=1.14.1=py39hb9d737c_0
- x264=1!157.20191217=h7b6447c_0
- x265=3.5=h924138e_3
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h27cfd23_1007
- xz=5.2.5=h7b6447c_0
- yaml=0.2.5=h7b6447c_0
- yarl=1.6.3=py39h27cfd23_0
- zeromq=4.3.4=h2531618_0
- zipp=3.7.0=pyhd3eb1b0_0
- zlib=1.2.11=h36c2ea0_1013
- zstd=1.4.5=h9ceee32_0
- pip:
- filelock==3.7.0
- gdown==4.4.0
- numpy-stl==2.17.1
- pyfastnoisesimd==0.4.2
- python-utils==3.2.3
- pytorch-msssim==0.2.1
- pywavefront==1.3.3
- soupsieve==2.3.2.post1
- torchsummary==1.5.1
prefix: /home/ubuntu/Thesis/miniconda3/envs/jero