From e90acc8cb96f3b93d9bdd1aacaacdd4686cbdaf5 Mon Sep 17 00:00:00 2001
From: Xiao Gui <xgui3783@gmail.com>
Date: Wed, 28 Aug 2024 15:11:44 +0200
Subject: [PATCH] fix: update siibra-python req (map.find_volumes add:
 codemeta/service meta

---
 api/server/api.py          | 37 +++++++++++++++++++++++--
 codemeta.json              | 57 ++++++++++++++++++++++++++++++++++++++
 requirements/v4-siibra.txt |  2 +-
 3 files changed, 93 insertions(+), 3 deletions(-)
 create mode 100644 codemeta.json

diff --git a/api/server/api.py b/api/server/api.py
index 875b4c9..d8c7763 100644
--- a/api/server/api.py
+++ b/api/server/api.py
@@ -68,6 +68,37 @@ def get_ready():
     TODO: implement me"""
     return "ready"
 
+@siibra_api.get("/servicemeta.json", include_in_schema=False)
+def servicemeta():
+    return {
+    "@context": "https://gitlab.ebrains.eu/lauramble/servicemeta/-/raw/main/data/contexts/servicemeta.jsonld",
+    "type": "WebApplication",
+    "alternateName": "siibra-api",
+    "author": [
+        {
+            "type": "Person",
+            "schema:affiliation": {
+                "type": "Organization",
+                "name": "Forschungszentrum Juelich"
+            },
+            "email": "xgui3783@gmail.com",
+            "familyName": "Gui",
+            "givenName": "Xiaoyun"
+        }
+    ],
+    "dateModified": "2024-08-28",
+    "documentation": "https://siibra-api.readthedocs.io/en/latest/",
+    "name": "siibra-api",
+    "version": "0.3.18",
+    "inputFormat": [
+        "json"
+    ],
+    "outputFormat": [
+        "nifti",
+        "json"
+    ]
+}
+
 @siibra_api.get("/", include_in_schema=False)
 def get_home(request: Request):
     """Return the template for the siibra landing page."""
@@ -94,17 +125,19 @@ async def read_bytes(generator) -> bytes:
 do_not_cache_list = [
     "metrics",
     "openapi.json",
-    "atlas_download"
+    "atlas_download",
+    "servicemeta",
 ]
 
 do_no_cache_query_list = [
     "bbox=",
-    "find="
+    "find=",
 ]
 
 do_not_logs = (
     "/ready",
     "/metrics",
+    "servicemeta"
 )
 
 
diff --git a/codemeta.json b/codemeta.json
new file mode 100644
index 0000000..9d4c16f
--- /dev/null
+++ b/codemeta.json
@@ -0,0 +1,57 @@
+{
+    "@context": "https://doi.org/10.5063/schema/codemeta-2.0",
+    "type": "SoftwareSourceCode",
+    "author": [
+        {
+            "id": "_:author_1",
+            "type": "Person",
+            "affiliation": {
+                "type": "Organization",
+                "name": "Forschungszentrum Juelich"
+            },
+            "email": "xgui3783@gmail.com",
+            "familyName": "Gui",
+            "givenName": "Xiaoyun"
+        },
+        {
+            "id": "_:author_2",
+            "type": "Person",
+            "familyName": "Marcenko",
+            "givenName": "Vadim"
+        },
+        {
+            "id": "_:author_3",
+            "type": "Person",
+            "familyName": "Simsek",
+            "givenName": "Ahmet Nihat"
+        },
+        {
+            "id": "https://orcid.org/0000-0002-9051-3701",
+            "type": "Person",
+            "affiliation": {
+                "type": "Organization",
+                "name": "Forschungszentrum Juelich"
+            },
+            "email": "t.dickscheid@fz-juelich.de",
+            "familyName": "Dickscheid",
+            "givenName": "Timo"
+        }
+    ],
+    "codeRepository": "git+https://github.com/fzj-inm1-bda/siibra-api.git",
+    "dateCreated": "2024-08-28",
+    "dateModified": "2024-08-28",
+    "datePublished": "2021-07-18",
+    "description": "Siibra-API provides an easy REST access to the siibra-python features.\n\n The main goal is to abstract the python functionalities in a way that they can be used via HTTP and make it more independent and accessible.",
+    "license": "https://spdx.org/licenses/Apache-2.0",
+    "name": "siibra-api",
+    "programmingLanguage": [
+        "python 3"
+    ],
+    "runtimePlatform": "docker",
+    "version": "0.3.18",
+    "contIntegration": "https://github.com/FZJ-INM1-BDA/siibra-api/actions",
+    "codemeta:continuousIntegration": {
+        "id": "https://github.com/FZJ-INM1-BDA/siibra-api/actions"
+    },
+    "issueTracker": "https://github.com/fzj-inm1-bda/siibra-api/issues"
+}
diff --git a/requirements/v4-siibra.txt b/requirements/v4-siibra.txt
index 7a573de..a16d4be 100644
--- a/requirements/v4-siibra.txt
+++ b/requirements/v4-siibra.txt
@@ -1,2 +1,2 @@
 # refactor_attr is... borked since dataops are being introduced
-git+https://github.com/FZJ-INM1-BDA/siibra-python.git@769ab07c05555b2c66261f9a38516e247e70318a
+git+https://github.com/xgui3783/siibra-python.git@aeffb478a1c98f3bec276ab820f5e50355c598a4