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Build nalu-wind +rocm amdgpu_target=gfx90a fails using:
nalu-wind +rocm amdgpu_target=gfx90a
Spack environment: spack.yaml.txt
- yszu6dv exawind@master%[email protected]~cuda~gpu-aware-mpi+hypre~ipo~openfast+rocm~stk_simd~sycl~tiny_profile~umpire amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] s7oyxte ^amr-wind@3cb334c76bf462b32e95b97802b18d7b5c097987=main%[email protected]~ascent~cuda~gpu-aware-mpi~hdf5+hypre~ipo~masa+mpi+netcdf~openfast~openmp+rocm+shared~sycl+tests~tiny_profile~umpire amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] eikfrex ^hypre@a67b6acc52b263a4aa56b6a7fb09276b78c569b9=develop%[email protected]~caliper~complex~cuda~debug+fortran~gptune~gpu-aware-mpi~int64~internal-superlu~magma~mixedint+mpi~openmp+rocm+shared~superlu-dist~sycl~umpire~unified-memory amdgpu_target=gfx90a build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] 4pmvb4g ^[email protected]%[email protected]~bignuma~consistent_fpcsr+fortran~ilp64+locking+pic+shared build_system=makefile symbol_suffix=none threads=none arch=linux-ubuntu20.04-x86_64 [+] opk2fdh ^[email protected]%[email protected]+cpanm+opcode+open+shared+threads build_system=generic patches=714e4d1 arch=linux-ubuntu20.04-x86_64 [+] bvpocrz ^[email protected]%[email protected]+cxx~docs+stl build_system=autotools patches=26090f4,b231fcc arch=linux-ubuntu20.04-x86_64 [+] x75cg2o ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] 2gxmxfz ^[email protected]%[email protected] build_system=autotools patches=bbf97f1 arch=linux-ubuntu20.04-x86_64 [e] s7ubsw4 ^[email protected]%[email protected] amdgpu_target=auto build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [e] 6xdus6g ^[email protected]%[email protected]+hiprand amdgpu_target=auto build_system=cmake build_type=Release generator=make patches=a35e689 arch=linux-ubuntu20.04-x86_64 [e] qq23z2l ^[email protected]%[email protected]~test amdgpu_target=auto build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [e] kj7ttr7 ^[email protected]%[email protected] amdgpu_target=auto build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [e] 4vf2w2d ^[email protected]%[email protected]~argobots~cuda+fortran~hwloc+hydra+libxml2+pci~rocm+romio~slurm~vci~verbs~wrapperrpath build_system=autotools datatype-engine=auto device=ch4 netmod=ofi pmi=pmi arch=linux-ubuntu20.04-x86_64 [+] xab5emm ^[email protected]%[email protected]+blosc~byterange~dap~fsync~hdf4~jna+mpi~nczarr_zip+optimize+parallel-netcdf+pic+shared+szip+zstd build_system=autotools patches=0161eb8 arch=linux-ubuntu20.04-x86_64 [+] rz3egrw ^[email protected]%[email protected]~debug~pic+shared build_system=generic arch=linux-ubuntu20.04-x86_64 [+] mfkxhgk ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] x4ev7kg ^[email protected]%[email protected] build_system=autotools libs=shared,static arch=linux-ubuntu20.04-x86_64 [+] 5dtmz2c ^[email protected]%[email protected]+avx2~ipo build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] np4e7rb ^[email protected]%[email protected]+pic build_system=makefile libs=shared,static arch=linux-ubuntu20.04-x86_64 [+] wouiz4z ^[email protected]%[email protected]~ipo+pic+shared build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] jrzn4ul ^[email protected]%[email protected]~cxx~fortran+hl~ipo~java~map+mpi+shared~szip~threadsafe+tools api=default build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] 23vvft6 ^[email protected]%[email protected]~ipo+shared build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] jln5xqc ^[email protected]%[email protected]~burstbuffer+cxx+fortran+pic+shared build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] 2zk6ze6 ^[email protected]%[email protected]+sigsegv build_system=autotools patches=9dc5fbd,bfdffa7 arch=linux-ubuntu20.04-x86_64 [+] owwhrha ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] ve52wyi ^[email protected]%[email protected]~programs build_system=makefile libs=shared,static arch=linux-ubuntu20.04-x86_64 [+] itgjywr ^[email protected]%[email protected]~doc+ncurses+ownlibs build_system=generic build_type=Release arch=linux-ubuntu20.04-x86_64 [+] 2ybxjtg ^[email protected]%[email protected]~gssapi~ldap~libidn2~librtmp~libssh~libssh2+nghttp2 build_system=autotools libs=shared,static tls=openssl arch=linux-ubuntu20.04-x86_64 [+] pmltobc ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] 322sfmt ^[email protected]%[email protected]~docs+shared build_system=generic certs=mozilla arch=linux-ubuntu20.04-x86_64 [+] thgudgh ^ca-certificates-mozilla@2023-05-30%[email protected] build_system=generic arch=linux-ubuntu20.04-x86_64 [+] x6ksnrs ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] m7dbp7w ^[email protected]%[email protected]~symlinks+termlib abi=none build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] knn3iiz ^[email protected]%[email protected]+compat+opt build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] w7qwcrr ^[email protected]%[email protected]~guile build_system=generic arch=linux-ubuntu20.04-x86_64 [e] vw37kqn ^[email protected]%[email protected]~cuda+rocm build_system=cmake build_type=Release generator=make patches=5068750,c2ee21c,ca523f1,ddd86f0 arch=linux-ubuntu20.04-x86_64 [e] xynkkpu ^[email protected]%[email protected]+image+shared build_system=cmake build_type=Release generator=make patches=9267179 arch=linux-ubuntu20.04-x86_64 [e] gypfklw ^[email protected]%[email protected]~link_llvm_dylib~llvm_dylib~openmp+rocm-device-libs build_system=cmake build_type=Release generator=ninja patches=a08bbe1 arch=linux-ubuntu20.04-x86_64 - ljsmyht ^nalu-wind@532e64cd66b3db4f61d501126f437c390dac4d29=main%[email protected]~boost~catalyst~cuda~fftw~gpu-aware-mpi+hypre~ipo~openfast+pic+rocm~shared~tests+tioga+trilinos-solvers~umpire~unit-tests~wind-utils abs_tol=1e-15 amdgpu_target=gfx90a build_system=cmake build_type=Release cxxstd=17 generator=make rel_tol=1e-12 arch=linux-ubuntu20.04-x86_64 [+] waulukx ^[email protected]%[email protected]~ipo build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] kpl7elp ^[email protected]%[email protected]~adelus~adios2+amesos+amesos2+anasazi+aztec~basker+belos+boost~chaco~complex~cuda~cuda_rdc~debug~dtk+epetra+epetraext~epetraextbtf~epetraextexperimental~epetraextgraphreorderings+exodus+explicit_template_instantiation~float+fortran+gtest+hdf5~hypre+ifpack+ifpack2~intrepid~intrepid2~ipo~isorropia+kokkos~mesquite~minitensor+ml+mpi+muelu~mumps~nox~openmp~panzer~phalanx~piro~python+rocm~rocm_rdc~rol~rythmos+sacado~scorec+shards~shared~shylu+stk~stokhos~stratimikos~strumpack~suite-sparse~superlu~superlu-dist~teko~tempus~test~thyra+tpetra~trilinoscouplings~wrapper~x11+zoltan~zoltan2 amdgpu_target=gfx90a build_system=cmake build_type=Release cxxstd=17 generator=make gotype=long_long arch=linux-ubuntu20.04-x86_64 [+] q3r7xh3 ^[email protected]%[email protected]~atomic~chrono~clanglibcpp~container~context~contract~coroutine~date_time~debug+exception~fiber~filesystem+graph~graph_parallel~icu~iostreams~json~locale~log+math~mpi+multithreaded~nowide~numpy~pic~program_options~python~random~regex~serialization+shared~signals~singlethreaded+stacktrace~system~taggedlayout~test~thread~timer~type_erasure~versionedlayout~wave build_system=generic cxxstd=98 patches=a440f96 visibility=hidden arch=linux-ubuntu20.04-x86_64 [+] gp3lu6n ^[email protected]%[email protected]~base_scope~fortran+hdf5~int64~ipo~legacy~mem_debug+mpi~pic+scoping+shared~static~testing~tools build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] d4hamal ^[email protected]%[email protected]~cairo~cuda~gl~libudev+libxml2~netloc~nvml~oneapi-level-zero~opencl+pci~rocm build_system=autotools libs=shared,static arch=linux-ubuntu20.04-x86_64 [+] 47tgik5 ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] qp7l7qc ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] 26jc2qb ^[email protected]%[email protected] build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] tj5lldx ^[email protected]%[email protected]+pic~python+shared build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] naalujk ^[email protected]%[email protected]~pic build_system=autotools libs=shared,static arch=linux-ubuntu20.04-x86_64 [+] 3rygj2u ^[email protected]%[email protected]+hdf5+shared+zlib build_system=autotools arch=linux-ubuntu20.04-x86_64 [+] q5mrfhv ^[email protected]%[email protected]~gdb~int64~ipo~real64+shared build_system=cmake build_type=Release generator=make patches=4991da9,93a7903,b1225da arch=linux-ubuntu20.04-x86_64 [+] szx3vir ^[email protected]%[email protected]~gdb~int64~ipo+shared build_system=cmake build_type=Release generator=make patches=4f89253,50ed208,704b84f arch=linux-ubuntu20.04-x86_64 [+] p2zzsws ^tioga@73a690616d4ca6478a3968fb6b6de3acd92bc71b=develop%[email protected]~ipo~nodegid+pic+shared~stats~timers build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64 [+] iktbvkr ^[email protected]%[email protected]~ipo+pic+shared~tests build_system=cmake build_type=Release generator=make arch=linux-ubuntu20.04-x86_64
Using Docker container image w/ pre-installed ROCm 5.4.3
ecpe4s/ubuntu20.04-runner-amd64-gcc-11.4-rocm5.4.3-mpi-base:2023.08.20
$> docker run -it ecpe4s/ubuntu20.04-runner-amd64-gcc-11.4-rocm5.4.3-mpi-base:2023.08.20 root@de172ee709b6:/# git clone https://github.com/eugeneswalker/spack /spack root@de172ee709b6:/# git -C /spack checkout exawind-rocm root@de172ee709b6:/# . /spack/share/spack/setup-env.sh root@de172ee709b6:/# spack -e . concretize -f -j24 | tee concretize.log root@de172ee709b6:/# spack -e . install -j24 ... ==> Installing nalu-wind-532e64cd66b3db4f61d501126f437c390dac4d29=main-ljsmyht6i77rhfbu3zpysac3gfmuhkcu [43/44] ==> No binary for nalu-wind-532e64cd66b3db4f61d501126f437c390dac4d29=main-ljsmyht6i77rhfbu3zpysac3gfmuhkcu found: installing from source ==> No patches needed for nalu-wind ==> nalu-wind: Executing phase: 'cmake' ==> nalu-wind: Executing phase: 'build' ==> Error: ProcessError: Command exited with status 2: 'make' '-j24' ... 926 [100%] Linking CXX executable naluX 927 /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/cmake-3.27.7-itgjywrzoenlycn6gkzxhoip7vw7cnpy/bin/cmake -E cmake_link_script CMakeFiles/naluX.dir/link.txt --verbose=1 928 /opt/rocm-5.4.3/bin/hipcc -fgpu-rdc -O3 -DNDEBUG -Wl,-rpath -Wl,/usr/local/mpich/install/mpich/lib CMakeFiles/naluX.dir/nalu.C.o -o naluX -Wl,-rpath,/spack/opt/spack/linux-ubuntu2 0.04-x86_64/gcc-11.4.0/cgns-4.4.0-gp3lu6ngi7tpkfuo6vnprustq2egrcis/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/netcdf-c-4.9.2-xab5emmn33znxhkjmbm77levizx4jj3v/lib:/spa ck/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/parallel-netcdf-1.12.3-jln5xqcszsaep4uclxoj5ibaaxfep3j3/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/hdf5-1.14.3-jrzn4u l7kubphk2fjauqci5yv3nnjg43/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/parmetis-4.0.3-szx3virtswng6jbmwcfsrz3zbibvlby7/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gc c-11.4.0/metis-5.1.0-q5mrfhv5itrdu4oj22eoyaznodwadaz2/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/zlib-ng-2.1.4-knn3iizbugamvvawnao4crtzm7vtp2q4/lib:/spack/opt/spack/l inux-ubuntu20.04-x86_64/gcc-11.4.0/openblas-0.3.24-4pmvb4gfgtcv4buit3j7pkuhadivloso/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyv ngqgpa/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/hwloc-2.9.1-d4hamal53fekiz2vrmtofwolw4t3fyld/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/yaml-cpp-0.7.0 -iktbvkrf23aa7vvjgogvsuzwp6gbw667/lib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/hypre-a67b6acc52b263a4aa56b6a7fb09276b78c569b9_develop-eikfrexb5rcibaiiuowaws7uf2cnqcvz/l ib:/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/tioga-73a690616d4ca6478a3968fb6b6de3acd92bc71b_develop-p2zzswsitdab7p5cv4h4htz3bvoluoyz/lib:/usr/local/mpich/install/mpich/l ib:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: libnalu.a /opt/rocm-5.4.3/lib/libamdhip64.so.5.4.50403 /opt/rocm-5.4.3/llvm/lib/clang/15.0.0/lib/linux/li bclang_rt.builtins-x86_64.a --hip-link --offload-arch=gfx90a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/li bmuelu-adapters.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libmuelu.a /spack/opt/spack/linux-ubuntu20.04 -x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_emend.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kp l7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_expreval.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_sea rch_util_base.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_unit_test_utils.a /spack/opt/spack/linux -ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_mesh_fixtures.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos- 13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_balance_lib.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgl tfxkxln4/lib/libstk_tools_lib.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_transfer_utils_lib.a /sp ack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_transfer_impl.a /spack/opt/spack/linux-ubuntu20.04-x86_64/g cc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_search.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgr grnk4phoad6zgltfxkxln4/lib/libstk_io_util.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_io.a /spack/ opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_mesh_base.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4. 0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_topology.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4p hoad6zgltfxkxln4/lib/libstk_ngp_test.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_math.a /spack/opt /spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_coupling.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/tr ilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_util_command_line.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrg rnk4phoad6zgltfxkxln4/lib/libstk_util_diag.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_util_regist ry.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_util_env.a /spack/opt/spack/linux-ubuntu20.04-x86_6 4/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_util_parallel.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28- kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libstk_util_util.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libifpa ck2.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libanasazitpetra.a /spack/opt/spack/linux-ubuntu20.04-x86 _64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libModeLaplace.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7 elpqgrgrnk4phoad6zgltfxkxln4/lib/libanasaziepetra.a 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/spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libteuchosparameterlis t.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libteuchosparser.a /spack/opt/spack/linux-ubuntu20.04-x86_6 4/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libteuchoscore.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf 3xloyvngqgpa/lib/libboost_graph.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_graph-mt.so /spack/opt/spack/linu x-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_stacktrace_noop-mt.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q 3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_stacktrace_basic.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_sta cktrace_noop.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_stacktrace_addr2line.so /spack/opt/spack/linux-ubunt u20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_stacktrace_addr2line-mt.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r 7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_stacktrace_basic-mt.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_st acktrace_backtrace.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/boost-1.83.0-q3r7xh3tyrlmze67zrwf3xloyvngqgpa/lib/libboost_stacktrace_backtrace-mt.so /spack/opt/spack/li nux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libkokkossimd.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4 .0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libkokkosalgorithms.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfx kxln4/lib/libkokkoscontainers.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libkokkoscore.a /usr/lib/x86_64 -linux-gnu/libdl.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/hwloc-2.9.1-d4hamal53fekiz2vrmtofwolw4t3fyld/lib/libhwloc.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc- 11.4.0/trilinos-13.4.0.2023.02.28-kpl7elpqgrgrnk4phoad6zgltfxkxln4/lib/libgtest.a /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/yaml-cpp-0.7.0-iktbvkrf23aa7vvjgogvsuzwp6gbw6 67/lib/libyaml-cpp.so.0.7.0 /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/hypre-a67b6acc52b263a4aa56b6a7fb09276b78c569b9_develop-eikfrexb5rcibaiiuowaws7uf2cnqcvz/lib/libHYPR E.so /spack/opt/spack/linux-ubuntu20.04-x86_64/gcc-11.4.0/tioga-73a690616d4ca6478a3968fb6b6de3acd92bc71b_develop-p2zzswsitdab7p5cv4h4htz3bvoluoyz/lib/libtioga.so /usr/local/mpich/i nstall/mpich/lib/libmpicxx.so /usr/local/mpich/install/mpich/lib/libmpi.so -ldl >> 929 lld: error: duplicate symbol: desul::Impl::HIP_SPACE_ATOMIC_LOCKS_DEVICE 930 >>> defined in /tmp/nalu-5bc2fe/nalu-gfx90a.o 931 >>> defined in /tmp/SyntheticLidar-f4e425/SyntheticLidar-gfx90a.o 932 >> 933 lld: error: duplicate symbol: desul::Impl::HIP_SPACE_ATOMIC_LOCKS_NODE 934 >>> defined in /tmp/nalu-5bc2fe/nalu-gfx90a.o 935 >>> defined in /tmp/SyntheticLidar-f4e425/SyntheticLidar-gfx90a.o 936 >> 937 lld: error: duplicate symbol: Kokkos::Impl::g_device_hip_lock_arrays 938 >>> defined in /tmp/nalu-5bc2fe/nalu-gfx90a.o 939 >>> defined in /tmp/SyntheticLidar-f4e425/SyntheticLidar-gfx90a.o ... >> 1009 lld: error: too many errors emitted, stopping now (use --error-limit=0 to see all errors) >> 1010 clang-15: error: amdgcn-link command failed with exit code 1 (use -v to see invocation) >> 1011 make[2]: *** [CMakeFiles/naluX.dir/build.make:221: naluX] Error 1 1012 make[2]: Leaving directory '/tmp/root/spack-stage/spack-stage-nalu-wind-532e64cd66b3db4f61d501126f437c390dac4d29_main-ljsmyht6i77rhfbu3zpysac3gfmuhkcu/spack-build-ljsmyht' >> 1013 make[1]: *** [CMakeFiles/Makefile2:423: CMakeFiles/naluX.dir/all] Error 2 1014 make[1]: Leaving directory '/tmp/root/spack-stage/spack-stage-nalu-wind-532e64cd66b3db4f61d501126f437c390dac4d29_main-ljsmyht6i77rhfbu3zpysac3gfmuhkcu/spack-build-ljsmyht' >> 1015 make: *** [Makefile:139: all] Error 2
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Build
nalu-wind +rocm amdgpu_target=gfx90a
fails using:Spack environment: spack.yaml.txt
Concretization
Using Docker container image w/ pre-installed ROCm 5.4.3
ecpe4s/ubuntu20.04-runner-amd64-gcc-11.4-rocm5.4.3-mpi-base:2023.08.20
The text was updated successfully, but these errors were encountered: