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---
layout: default
---
<!-- Banner -->
<section id="banner">
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".inner" is set up as an inline-block so it automatically expands
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<div class="inner">
<header>
<img src="images/logo.png"/>
</header>
<p>Welcome to <strong>EnvGen</strong>, the group<br />
of Environmental Genomics<br />
at <a href="http://kth.se">KTH</a>, located at <a href="http://scilifelab.se">Scilifelab</a><br />
in Stockholm, Sweden.</p>
<footer>
<ul class="buttons vertical">
<li><a href="#main" class="button fit scrolly">Tell Me More</a></li>
</ul>
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</section>
<!-- Main -->
<article id="main">
<section class="wrapper style1 container special", id="intro">
<header class="special container">
<span class="icon fa-bar-chart-o"></span>
<h2> We study <strong>microbial communities</strong> using shotgun metagenomics and amplicon <strong>sequencing</strong> and develop methodology for enhancing such studies.
</h2>
<p>
The activities of complex microbial communities shape our planet and affect the health of the humans. In our group we employ metagenomics and taxonomic marker gene sequencing to explore patterns of microbial diversity and reconstruct genomes and metabolic pathways of microbes in environments ranging from the Baltic Sea to the rumen of Moose. We also develop molecular and bioinformatics tools for enhancing the information output from such studies. An introduction to metagenomics and amplicon sequencing can be found <a href="/metagenomics.html#main">here</a>.
</p>
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<h3>Now check out...</h3>
<a href="/projects.html#main" class="button special">Our Projects</a>
<a href="/whoweare.html#main" class="button special">Who we are</a>
<a href="http://scholar.google.com/citations?user=7xoXsREAAAAJ&hl=en" class="button special">Our Publications</a>
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</section>
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<section class="wrapper style3 container special", id="who">
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<section class="wrapper style1 container special", id="press">
<h2>Press Releases</h2>
<ul>
<li><a href="https://www.scilifelab.se/news/adaptation-to-salinity-across-the-bacterial-tree-of-life-comparing-genomes-to-unravel-molecular-mechanisms/">Adaptation to salinity across the bacterial tree of life: comparing genomes to unravel molecular mechanisms
<li><a href="http://www.scilifelab.se/news/dna-from-13-of-the-baltic-sea-plankton-catalogued/">Comprehensive catalogue of Baltic Sea plankton genomes
<li><a href="https://www.youtube.com/watch?v=RGZsWeIF5is">Underground bacteria and nuclear waste repositories (Movie!)
<li><a href="http://www.alphagalileo.org/ViewItem.aspx?ItemId=159656&CultureCode=en">Closest relatives of Baltic Sea plankton are found in brackish North American waters</li>
<li><a href="https://www.kth.se/forskning/artiklar/mysteriet-i-ostersjon-var-kommer-planktonen-fran-1.616102">Mysteriet i Östersjön: Var kommer planktonen från?</a></li>
<li><a href="http://www.forskning.se/nyheterfakta/nyheter/pressmeddelanden/dethartarmsjukdomarochostersjongemensamt.5.3b19111a146b5b338a61db9.html">Ny algoritm för att sätta ihop bakteriers genom</a></li>
<li><a href="http://www.scilifelab.se/news/scilifelab-chosen-for-large-eu-project-to-improve-baltic-sea-health/">EU-project for microbial monitoring of the Baltic Sea</a></li>
<li><a href="http://www.liu.se/forskning/forskningsnyheter/1.489366?l=en">Decreased gut bacterial diversity in infants born by Caesarean section</a></li>
<li><a href="http://www.scilifelab.se/news/international-study-suggests-human-genes-influence-gut-microbial-composition/">A human gene associated with gut microbiota composition</a></li>
<li><a href="http://www.kth.se/en/aktuellt/nyheter/ostersjons-flora-av-bakterieplankton-kartlagd-1.178136">A 3D map of the Baltic Sea microbiome</a></li>
</ul>
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<h2>Check out our projects on GitHub:</h2>
<p>Where we share our bioinformatic software and lab protocols.</p>
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<li><a href="https://github.com/envgen" class="button special">EnvGen on Github</a></li>
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