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pyproject.toml
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pyproject.toml
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[build-system]
requires = [
"setuptools>=64",
"wheel",
"setuptools_scm[toml]>=8"
]
build-backend = "setuptools.build_meta"
[project]
name = "spotmax"
authors = [
{ name = "Francesco Padovani", email = "[email protected]" },
]
description = "Automatic 3D detection and quantification of fluorescent objects"
keywords = [
"3D fluorescent signal analysis",
"image analysis",
]
classifiers = [
"Development Status :: 3 - Alpha",
"Programming Language :: Python :: 3 :: Only",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"License :: OSI Approved :: BSD License",
"Intended Audience :: Education",
"Intended Audience :: Science/Research",
"Operating System :: Microsoft :: Windows",
"Operating System :: POSIX",
"Operating System :: Unix",
"Operating System :: MacOS",
"Topic :: Scientific/Engineering",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"Topic :: Scientific/Engineering :: Information Analysis",
"Topic :: Scientific/Engineering :: Image Processing",
"Topic :: Scientific/Engineering :: Visualization",
"Topic :: Utilities",
]
requires-python = ">=3.9"
dependencies = [
"PyYAML",
]
dynamic = [
"version",
]
[project.readme]
file = "README.rst"
content-type = "text/x-rst"
[project.urls]
Homepage = "https://github.com/ElpadoCan/SpotMAX"
"Author contact" = "https://schmollerlab.com/francescopadovani"
"Schmoller lab" = "https://schmollerlab.com/"
[project.optional-dependencies]
all = [
"cellacdc",
"numba",
"torch",
"pyyaml",
"pytorch3dunet-spotmax",
"wandb",
"bioimageio.core",
"bioimageio.spec"
]
biio = [
"bioimageio.core",
"bioimageio.spec"
]
[project.scripts]
spotmax = "spotmax.__main__:run"
smax = "spotmax.__main__:run"
browseini = "spotmax.io:browse_last_used_ini_folderpath"
[tool.setuptools]
include-package-data = true
[tool.setuptools.packages.find]
namespaces = false
[tool.setuptools_scm]
version_file = "spotmax/_version.py"
# Ignore DeprecationWarnings
[tool.pytest.ini_options]
filterwarnings = [
"ignore::DeprecationWarning"
]