diff --git a/.github/workflows/python-package.yml b/.github/workflows/python-package.yml index 893cf7f..b822d09 100644 --- a/.github/workflows/python-package.yml +++ b/.github/workflows/python-package.yml @@ -16,7 +16,7 @@ jobs: strategy: # You can use PyPy versions in python-version. For example, pypy2 and pypy3 matrix: - python-version: [3.7, 3.8, 3.9] + python-version: ["3.8", "3.9", "3.10"] steps: - uses: actions/checkout@v2 diff --git a/.github/workflows/testing.yml b/.github/workflows/testing.yml index 4f71451..038e142 100644 --- a/.github/workflows/testing.yml +++ b/.github/workflows/testing.yml @@ -12,7 +12,7 @@ jobs: fail-fast: false matrix: os: [ubuntu-latest, macos-11, windows-latest] - python-version: ["3.7", "3.8", "3.9", "3.10"] #3.9 only failing for tables on macos and windows; mwm 6302021 + python-version: ["3.8", "3.9", "3.10"] #3.9 only failing for tables on macos and windows; mwm 6302021 include: - os: ubuntu-latest path: ~/.cache/pip @@ -42,6 +42,6 @@ jobs: shell: bash - name: Install and test run: | - python -m pip install --upgrade pip wheel poetry - python -m poetry install - python -m poetry run dlc-live-test --nodisplay + python -m pip install --upgrade pip + python -m pip install . + dlc-live-test --nodisplay diff --git a/README.md b/README.md index 311d22c..0e91ed5 100644 --- a/README.md +++ b/README.md @@ -93,7 +93,7 @@ DeepLabCut-live offers some analysis tools that allow users to peform the follow 1. Test inference speed across a range of image sizes, downsizing images by specifying the `resize` or `pixels` parameter. Using the `pixels` parameter will resize images to the desired number of `pixels`, without changing the aspect ratio. Results will be saved (along with system info) to a pickle file if you specify an output directory. ##### python ```python -dlclive.benchmark_videos('/path/to/exported/model', ['/path/to/video1', '/path/to/video2'], output='/path/to/output', resize=[1.0, 0.75, '0.5']) +dlclive.benchmark_videos('/path/to/exported/model', ['/path/to/video1', '/path/to/video2'], output='/path/to/output', resize=[1.0, 0.75, 0.5]) ``` ##### command line ``` diff --git a/dlclive/benchmark.py b/dlclive/benchmark.py index 4cb4fb1..b5a345c 100644 --- a/dlclive/benchmark.py +++ b/dlclive/benchmark.py @@ -12,7 +12,7 @@ import sys import warnings import subprocess -import typing +from typing import List, Optional, Tuple, Union import pickle import colorcet as cc from PIL import ImageColor @@ -151,8 +151,8 @@ def benchmark( model_path, video_path, tf_config=None, - resize=None, - pixels=None, + resize: Optional[float] = None, + pixels: Optional[int] = None, cropping=None, dynamic=(False, 0.5, 10), n_frames=1000, @@ -164,7 +164,7 @@ def benchmark( save_poses=False, save_video=False, output=None, -) -> typing.Tuple[np.ndarray, tuple, bool, dict]: +) -> Tuple[np.ndarray, tuple, bool, dict]: """ Analyze DeepLabCut-live exported model on a video: Calculate inference time, display keypoints, or @@ -521,8 +521,8 @@ def benchmark_videos( output=None, n_frames=1000, tf_config=None, - resize=None, - pixels=None, + resize: Optional[Union[float, List[float]]] = None, + pixels: Optional[Union[int, List[int]]] = None, cropping=None, dynamic=(False, 0.5, 10), print_rate=False, @@ -551,7 +551,7 @@ def benchmark_videos( path to directory to save results tf_config : :class:`tensorflow.ConfigProto` tensorflow session configuration - resize : int, optional + resize : float, optional resize factor. Can only use one of resize or pixels. If both are provided, will use pixels. by default None pixels : int, optional downsize image to this number of pixels, maintaining aspect ratio. Can only use one of resize or pixels. If both are provided, will use pixels. by default None @@ -603,10 +603,10 @@ def benchmark_videos( # fix resize if pixels: - pixels = pixels if type(pixels) is list else [pixels] + pixels = [int(p) for p in pixels] if type(pixels) is list else [int(pixels)] resize = [None for p in pixels] elif resize: - resize = resize if type(resize) is list else [resize] + resize = [float(r) for r in resize] if type(resize) is list else [float(resize)] pixels = [None for r in resize] else: resize = [None] diff --git a/poetry.lock b/poetry.lock index c2ad006..87ebbc9 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,22 +1,20 @@ -# This file is automatically @generated by Poetry and should not be changed by hand. +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. 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