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summarize_draws_mc.R
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library(posterior)
library(dplyr)
obj <- example_draws()
summarize_draws_mc <- function(obj, ...,cores=parallel::detectCores()) {
varlist <- dimnames(obj)$variable
# find an optimal-ish breakdown of variable names
var_break <- floor(length(varlist)/cores)
var_extra <- length(varlist) %% cores
if(var_extra>0) {
var_splits <- c(rep(1:cores,each=var_break),
1:var_extra)
} else {
var_splits <- rep(1:cores,each=var_break)
}
over_vars <- parallel::mclapply(1:cores, function(c,...){
subset_draws(obj,variable=varlist[var_splits==c]) %>%
summarize_draws(...)
},mc.cores=cores) %>%
bind_rows
slice(over_vars,match(varlist,variable))
}
sum_obj <- summarize_draws(obj)
sum_obj_mc <- summarize_draws_mc(obj)
identical(sum_obj,sum_obj_mc)
#check time differences
time1 <- system.time(summarize_draws(obj))
time2 <- system.time(summarize_draws_mc(obj))
time1
time2
# not particularly efficient, but should speed up with more variables/parameters